Citrus Sinensis ID: 010529
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 508 | 2.2.26 [Sep-21-2011] | |||||||
| Q944A7 | 512 | Probable serine/threonine | yes | no | 0.998 | 0.990 | 0.768 | 0.0 | |
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.875 | 0.913 | 0.609 | 1e-160 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.877 | 0.959 | 0.541 | 1e-141 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.602 | 0.742 | 0.319 | 7e-37 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.637 | 0.790 | 0.306 | 2e-36 | |
| Q1PEM5 | 513 | Proline-rich receptor-lik | no | no | 0.537 | 0.532 | 0.307 | 7e-36 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.553 | 0.659 | 0.309 | 2e-35 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.545 | 0.712 | 0.314 | 3e-35 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.618 | 0.636 | 0.318 | 3e-35 | |
| Q9FE20 | 456 | Serine/threonine-protein | no | no | 0.557 | 0.620 | 0.328 | 9e-35 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/513 (76%), Positives = 432/513 (84%), Gaps = 6/513 (1%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEA-STESDTATPTATVQPTNEEA----PLFS 55
MGCC+S F + +D V +PL+Q +T +D P FS
Sbjct: 1 MGCCQSLFSGDNPLGKDGV-QPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFS 59
Query: 56 EFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKE 115
EFSF DL+AATNNFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWP+P QF E
Sbjct: 60 EFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEPKQFAE 119
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAF 175
EA GVGKLR RLANLIGYCC GDERLLVAE+MPNDTLAKHLFHWE QTIEW +RLRV +
Sbjct: 120 EAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGY 179
Query: 176 YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPE 235
YIAEALDYC+TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPE
Sbjct: 180 YIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
YL+NGRV PESV YSFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEGKFS+EEA
Sbjct: 240 YLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEA 299
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLS 355
T VV LASQCLQYEPRERP+TK+LV TLA LQTKSDVPS VML + K EEA STPQRPLS
Sbjct: 300 TVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPLS 359
Query: 356 PLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDF 415
PL EACSRMDLTAIHQILVM HYRDD+ T+ELSFQEWTQQM+DML+ARK+GD +FR+KDF
Sbjct: 360 PLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFREKDF 419
Query: 416 KTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475
KTAID YSQFI+V MVSPTV+ RRSLC+L D+ DAAL DAMQAQC +PDWPTAFYMQS
Sbjct: 420 KTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQS 479
Query: 476 VALSKLDMQKDAADMLLEGAALEEKRQRGARAS 508
VAL+KL+M DAADML E A LEEKRQRG R S
Sbjct: 480 VALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/451 (60%), Positives = 344/451 (76%), Gaps = 6/451 (1%)
Query: 52 PLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPT 111
P F EFS +R AT+ F+++NIVSE GE+A NVVYKG+LEN++ IAVK+F + +WPD
Sbjct: 39 PQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSR 98
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
QF EEA+ VG+LR R+ANL+G C +ERLL+AE+MPN+TLAKHLFHWE Q ++W +RL
Sbjct: 99 QFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRL 158
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY 231
RVA +IA+AL+YC ++GR LYHDLNAYRVLFD+D +PRLSCFGLMKNS DGKSYSTNLA+
Sbjct: 159 RVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAF 218
Query: 232 TPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
TPPEYL+ GRV PESVIYSFGT+LLDLLSGKHIPPSHALD+IR N+ +LMDS LEG+FS
Sbjct: 219 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFS 278
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQ 351
S++ T+++ LAS+CLQYEPRERP+ K+LV + LQ ++ S+ +L V S
Sbjct: 279 SDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGV-----PNSATT 333
Query: 352 RPLSPLAEACSRMDLTAIHQILVMAHYRDDK-ETHELSFQEWTQQMRDMLEARKQGDTAF 410
LSPL EAC R DLTAIH+I+ Y+DD+ T ELSFQ WT QM+D L +K+GD+AF
Sbjct: 334 TALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAF 393
Query: 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTA 470
R KDF AI+ YSQFI V M SPTV+AR+SLC+L +D AL +AMQAQ P W A
Sbjct: 394 RHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIA 453
Query: 471 FYMQSVALSKLDMQKDAADMLLEGAALEEKR 501
Y+Q+VALS L + +A L +GA LE KR
Sbjct: 454 SYLQAVALSALGQENEAHTALKDGAMLESKR 484
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/465 (54%), Positives = 332/465 (71%), Gaps = 19/465 (4%)
Query: 39 TPTATVQPTNE--EAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQW 96
T A+ +P N E P ++FSF L+ ATN+FS +NIVS+ + ++VV+KGRL+N +
Sbjct: 18 TTDASSEPRNGGGEDPPLTKFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGGF 74
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKH 156
+A+K+F +AW DP F EEA+ VGKLR KRL NLIGYCC GD+R LVA++M NDTLAK
Sbjct: 75 VAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKR 134
Query: 157 LFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216
LF + QT++W +RLRVA+++AEALDYCNT G Y++L+AY+VLFDEDGD LSCFGLM
Sbjct: 135 LFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLM 194
Query: 217 KNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276
K + + + G V PE+VIY FGTVL++LLSGK IPPSHA +MI +
Sbjct: 195 KEINNDQ-------------ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRK 241
Query: 277 NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
N+ LMD +L+GKFS +EA V LASQCL+YE +E P+TK +V TL LQT+++ PS
Sbjct: 242 NVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYE 301
Query: 337 MLRVSKHEEAQSTPQRPLSPLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQM 396
++ ++ E+ S+ LSPL EAC RMDL +IH ILV+A Y DDK+ ELSF+EW Q++
Sbjct: 302 VVEMTNQEKDASSSSN-LSPLGEACLRMDLASIHSILVLAGYDDDKDIIELSFEEWIQEV 360
Query: 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLD 456
+++ + R+ GD AF ++DFKTAI YSQF+ +V P+VYARRSL +LF D + ALLD
Sbjct: 361 KELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLD 420
Query: 457 AMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501
M AQ PDWPTAFY+QSVAL+KLDM D+AD L E A LE K+
Sbjct: 421 GMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 175/344 (50%), Gaps = 38/344 (11%)
Query: 50 EAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQW----------IAV 99
++P F+F +L+AAT NF D+++ E G + V+KG ++ + IAV
Sbjct: 50 QSPNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAV 106
Query: 100 KKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFH 159
KK + W ++ E +G+ L LIGYC + RLLV E+MP +L HLF
Sbjct: 107 KKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFR 166
Query: 160 WEK--QTIEWPLRLRVAFYIAEALDYC-NTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216
Q + W LRL+VA A+ L + N E +Y D +L D + + +LS FGL
Sbjct: 167 RGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLA 226
Query: 217 KNSMDG-KSY-STNL----AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG-----KHIP 265
K+ G KS+ ST + Y PEYL G + +S +YS+G VLL++LSG K+ P
Sbjct: 227 KDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRP 286
Query: 266 PSH------ALDMIRGE-NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
P A ++ + L ++D+ L+ ++S EEA +V LA +CL +E + RP+
Sbjct: 287 PGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNE 346
Query: 319 LVVTLARLQTKSDVPSN----VMLRVSKHEEAQSTPQRPLSPLA 358
+V L +QT ++ V R+ + ++ + Q+P + A
Sbjct: 347 VVSHLEHIQTLNEAGGRNIDMVQRRMRRRSDSVAINQKPNAGFA 390
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 177/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MG C S+ +K + + + ++ S + P+ + ++P FSF
Sbjct: 1 MGICLSAQVKAESSGASTKYDAKDIGSLGSKAS-SVSVRPSPRTEGEILQSPNLKSFSFA 59
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQW----------IAVKKFTKVAWPDP 110
+L++AT NF D+++ E G V+KG ++ + IAVKK + W
Sbjct: 60 ELKSATRNFRPDSVLGEGG---FGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGH 116
Query: 111 TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFH--WEKQTIEWP 168
++ E +G+ + L LIGYC + RLLV E+MP +L HLF Q + W
Sbjct: 117 QEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWK 176
Query: 169 LRLRVAFYIAEALDYCN-TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY- 225
LRL+VA A+ L + + +E R +Y D +L D + + +LS FGL K+ G KS+
Sbjct: 177 LRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHV 236
Query: 226 STNL----AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP----PSHALDMIRGEN 277
ST + Y PEYL G + +S +YSFG VLL+LLSG+ PS +++
Sbjct: 237 STRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAK 296
Query: 278 LNL--------LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
L ++D+ L+ ++S EEA +V L+ +CL E + RP+ +V L +Q+
Sbjct: 297 PYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQS 355
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PEM5|PERK3_ARATH Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 154/302 (50%), Gaps = 29/302 (9%)
Query: 55 SEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFK 114
S F++ +L ATN FS N++ E G VYKG L N +AVK+ + +F+
Sbjct: 169 STFTYGELARATNKFSEANLLGEGG---FGFVYKGILNNGNEVAVKQLKVGSAQGEKEFQ 225
Query: 115 EEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVA 174
E + ++ + L +L+GYC AG +RLLV E++PN+TL HL + T+EW LRL++A
Sbjct: 226 AEVNIISQIHHRNLVSLVGYCIAGAQRLLVYEFVPNNTLEFHLHGKGRPTMEWSLRLKIA 285
Query: 175 FYIAEALDYCNTEGRP--LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST----- 227
++ L Y + P ++ D+ A +L D + +++ FGL K ++D ++ +
Sbjct: 286 VSSSKGLSYLHENCNPKIIHRDIKAANILIDFKFEAKVADFGLAKIALDTNTHVSTRVMG 345
Query: 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHA-----------------L 270
Y PEY +G++ +S +YSFG VLL+L++G+ P A +
Sbjct: 346 TFGYLAPEYAASGKLTEKSDVYSFGVVLLELITGRR--PVDANNVYADDSLVDWARPLLV 403
Query: 271 DMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
+ N L D L ++ EE ++V A+ C++Y R RP +V L + S
Sbjct: 404 QALEESNFEGLADIKLNNEYDREEMARMVACAAACVRYTARRRPRMDQVVRVLEGNISPS 463
Query: 331 DV 332
D+
Sbjct: 464 DL 465
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 42/323 (13%)
Query: 40 PTATVQPTNEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQW--- 96
PT + +P F+F +L+ AT NF DN++ E G V+KG ++
Sbjct: 57 PTLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGG---FGCVFKGWIDQTSLTAS 113
Query: 97 -------IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149
+AVK+ + ++ E +G+L L L+GYC G+ RLLV E+MP
Sbjct: 114 RPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMP 173
Query: 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN-TEGRPLYHDLNAYRVLFDEDGDP 208
+L HLF Q + W +R++VA A+ L + + + + +Y D A +L D D +
Sbjct: 174 KGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNA 233
Query: 209 RLSCFGLMKNSMDGKS--YSTNL----AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK 262
+LS FGL K G + ST + Y PEY+ GR+ +S +YSFG VLL+L+SG+
Sbjct: 234 KLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR 293
Query: 263 HIPPSHALDMIRGEN-----------------LNLLMDSHLEGKFSSEEATQVVGLASQC 305
A+D G N L +MD+ L G++ + A LA QC
Sbjct: 294 -----RAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQC 348
Query: 306 LQYEPRERPSTKNLVVTLARLQT 328
L + + RP ++VTL +L++
Sbjct: 349 LNPDAKLRPKMSEVLVTLEQLES 371
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 160/312 (51%), Gaps = 35/312 (11%)
Query: 57 FSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQW----------IAVKKFTKVA 106
FSF +L+ AT NF SD++V E G V++G L+ IAVK+
Sbjct: 49 FSFNELKLATRNFRSDSVVGEGG---FGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDG 105
Query: 107 WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLF---HWEKQ 163
+ ++ E +G+L L LIGYC ++RLLV E+M +L HLF + + +
Sbjct: 106 FQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFK 165
Query: 164 TIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS-MD 221
+ W LR++VA A+ L + +++ + +Y D+ A +L D D + +LS FGL ++ M
Sbjct: 166 PLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMG 225
Query: 222 GKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK----HIPPSHALDM 272
+SY + Y PEY+ G + S +YSFG VLL+LL G+ H P+ ++
Sbjct: 226 EQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNL 285
Query: 273 I--------RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324
+ + L++D+ L ++ E A ++ +A QCL +EP+ RP+ +V L
Sbjct: 286 VDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALV 345
Query: 325 RLQTKSDVPSNV 336
+LQ P+NV
Sbjct: 346 QLQDSVVKPANV 357
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 178/358 (49%), Gaps = 44/358 (12%)
Query: 14 RERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFS---EFSFLDLRAATNNFS 70
+ +E N++P+ Q +T S+ + ++T +EE + S +F+F DL+ +T NF
Sbjct: 85 KSANEKSNDQPVGQVSSTTTTSNAESSSSTPV-ISEELNISSHLRKFTFNDLKLSTRNFR 143
Query: 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFT------KVAWPDPTQFKEE----AEGV 120
++++ E G V+KG +E VK T K PD Q +E +
Sbjct: 144 PESLLGEGG---FGCVFKGWIEENGTAPVKPGTGLTVAVKTLNPDGLQGHKEWLAEINFL 200
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
G L L L+GYC D+RLLV E+MP +L HLF + W +R+++A A+
Sbjct: 201 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKG 259
Query: 181 LDYCNTEG-RP-LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-GKSYST-----NLAYT 232
L + + E +P +Y D +L D D + +LS FGL K++ D GK++ + Y
Sbjct: 260 LSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYA 319
Query: 233 PPEYLKNGRVIPESVIYSFGTVLLDLLSG-----KHIPPS----------HALDMIRGEN 277
PEY+ G + +S +YSFG VLL++L+G K+ P H LD R
Sbjct: 320 APEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKRR--- 376
Query: 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
L+D LEG FS + A +V LA+QCL +P+ RP ++V L L D+ S+
Sbjct: 377 FYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEALKPLPHLKDMASS 434
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 159/317 (50%), Gaps = 34/317 (10%)
Query: 57 FSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENR-QWIAVKKFTKVAWPDPTQFKE 115
F+F +L AAT NF D + E G VYKGRL++ Q +AVK+ + +F
Sbjct: 74 FAFRELAAATMNFHPDTFLGEGG---FGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLV 130
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRV 173
E + L L NLIGYC GD+RLLV E+MP +L HL +K+ ++W +R+++
Sbjct: 131 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKI 190
Query: 174 AFYIAEALDYCNTEGRP--LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYST--- 227
A A+ L++ + + P +Y D + +L DE P+LS FGL K G KS+ +
Sbjct: 191 AAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRV 250
Query: 228 --NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL----- 280
Y PEY G++ +S +YSFG V L+L++G+ S +M GE NL
Sbjct: 251 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDS---EMPHGEQ-NLVAWAR 306
Query: 281 -----------LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
L D L+G+F + Q + +AS C+Q + RP ++V L+ L +
Sbjct: 307 PLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQ 366
Query: 330 SDVPSNVMLRVSKHEEA 346
+ PS R ++ E
Sbjct: 367 AYDPSKDDSRRNRDERG 383
|
Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 508 | ||||||
| 224080762 | 499 | predicted protein [Populus trichocarpa] | 0.982 | 1.0 | 0.783 | 0.0 | |
| 255569566 | 500 | receptor protein kinase, putative [Ricin | 0.978 | 0.994 | 0.777 | 0.0 | |
| 297744528 | 500 | unnamed protein product [Vitis vinifera] | 0.984 | 1.0 | 0.773 | 0.0 | |
| 224103071 | 498 | predicted protein [Populus trichocarpa] | 0.976 | 0.995 | 0.774 | 0.0 | |
| 18418600 | 512 | BR-signaling kinase 1 [Arabidopsis thali | 0.998 | 0.990 | 0.768 | 0.0 | |
| 359474808 | 514 | PREDICTED: probable serine/threonine-pro | 0.970 | 0.959 | 0.776 | 0.0 | |
| 147797812 | 508 | hypothetical protein VITISV_000979 [Viti | 1.0 | 1.0 | 0.763 | 0.0 | |
| 225459846 | 508 | PREDICTED: probable serine/threonine-pro | 1.0 | 1.0 | 0.761 | 0.0 | |
| 3080427 | 524 | putative protein [Arabidopsis thaliana] | 0.998 | 0.967 | 0.750 | 0.0 | |
| 297798402 | 524 | hypothetical protein ARALYDRAFT_328224 [ | 0.994 | 0.963 | 0.746 | 0.0 |
| >gi|224080762|ref|XP_002306223.1| predicted protein [Populus trichocarpa] gi|222849187|gb|EEE86734.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/508 (78%), Positives = 434/508 (85%), Gaps = 9/508 (1%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MGCC SSFL ET E+D + R + + A + P P F EFSF
Sbjct: 1 MGCCSSSFLSETHPEKDHKKTHQQQPPRNPSGS--------AVLDPATG-VPSFCEFSFS 51
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV 120
DL+ ATNNFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWPDP QF EEA GV
Sbjct: 52 DLKTATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPDPKQFAEEAWGV 111
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
GKLR K+LANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVA YIAEA
Sbjct: 112 GKLRHKKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 171
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG 240
LDYC++EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPEYL+NG
Sbjct: 172 LDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNG 231
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
RV PESVIYSFGTVLLDLLSGKHIPPS A+DMIRG+N+ LLMDSHLEG FS+EEAT VVG
Sbjct: 232 RVTPESVIYSFGTVLLDLLSGKHIPPSRAIDMIRGKNIILLMDSHLEGNFSTEEATLVVG 291
Query: 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
LASQCLQYEPRERPSTK+LV TLA LQTK DVPS VML +SKHEEA +TPQRPLSP+ EA
Sbjct: 292 LASQCLQYEPRERPSTKDLVTTLAPLQTKPDVPSYVMLGISKHEEAPATPQRPLSPMGEA 351
Query: 361 CSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAID 420
CSRMDLTAIHQILVM HY+DD+ T+ELSFQEWTQQMRDMLE+RK+GD AFRDKDFKTAID
Sbjct: 352 CSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLESRKRGDFAFRDKDFKTAID 411
Query: 421 YYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480
YSQFI+V MVSPTV+ARRSLC+L D+ DAAL DAMQAQC +PDWPTAFYMQSVAL+K
Sbjct: 412 CYSQFIDVGTMVSPTVFARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAK 471
Query: 481 LDMQKDAADMLLEGAALEEKRQRGARAS 508
LDM DAADML E AALEEK+QRG + S
Sbjct: 472 LDMHNDAADMLNEAAALEEKKQRGGKGS 499
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255569566|ref|XP_002525749.1| receptor protein kinase, putative [Ricinus communis] gi|223534963|gb|EEF36648.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/504 (77%), Positives = 438/504 (86%), Gaps = 7/504 (1%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MGCCESS + ET E+D+ T+++ + +P++ + + P FSEFSF
Sbjct: 1 MGCCESSLVTETHPEKDQ-------TKKQTQINNHNNPSPSSVLLDPSTGIPSFSEFSFS 53
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV 120
DL+AAT+NFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWPDP QF EEA GV
Sbjct: 54 DLKAATDNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPDPKQFAEEAWGV 113
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
GKLR KRLANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVAFYIAEA
Sbjct: 114 GKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAFYIAEA 173
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG 240
LDYC+++GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPEYL+NG
Sbjct: 174 LDYCSSQGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNG 233
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
RV PESV+YSFGTVLLDLLSGKHIPP+HALDMIRG N+ LLMDSHLEG FS+EEAT VVG
Sbjct: 234 RVTPESVMYSFGTVLLDLLSGKHIPPNHALDMIRGRNIILLMDSHLEGNFSTEEATVVVG 293
Query: 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
L SQCLQYEPRERPSTK+LV TLARLQTK DVPS VML ++KHEEA TPQRPLSP+ EA
Sbjct: 294 LGSQCLQYEPRERPSTKDLVTTLARLQTKLDVPSYVMLGIAKHEEAPPTPQRPLSPMGEA 353
Query: 361 CSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAID 420
CSRMDLTAIHQILVM HY+DD+ T+ELSFQEWTQQMRDML++RK GD AFRDKDFKTAID
Sbjct: 354 CSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLDSRKHGDYAFRDKDFKTAID 413
Query: 421 YYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480
YSQFI+V MVSPTV+ARRSLC+L +D+ DAAL DAMQAQC +P+WPTAFYMQSVAL+K
Sbjct: 414 CYSQFIDVGTMVSPTVFARRSLCYLMNDQPDAALRDAMQAQCVYPEWPTAFYMQSVALAK 473
Query: 481 LDMQKDAADMLLEGAALEEKRQRG 504
LDM DAADML E AALEEK++ G
Sbjct: 474 LDMHNDAADMLNEAAALEEKKRSG 497
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744528|emb|CBI37790.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/508 (77%), Positives = 434/508 (85%), Gaps = 8/508 (1%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MGCCESSFL ET E+D+ Q ++ + P + P + P FSEFSF
Sbjct: 1 MGCCESSFLTETHPEKDD--------QHHHNNSHNTQNPPFSPPSPADGGVPSFSEFSFS 52
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV 120
DL+AATNNFSSD+IVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWPDP QF EEA GV
Sbjct: 53 DLKAATNNFSSDSIVSESGEKAPNIVYKGRLQNRRWIAVKKFTKMAWPDPKQFAEEAWGV 112
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
G+LR +RLANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVA +IAEA
Sbjct: 113 GRLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALFIAEA 172
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG 240
LD+C+TE R LYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPEYL+NG
Sbjct: 173 LDFCSTESRSLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNG 232
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
RV PESVIYSFGTVLLDLLSGKHIPPSHALD+IR +N+ LLMDSHLEG FS+EEAT VVG
Sbjct: 233 RVTPESVIYSFGTVLLDLLSGKHIPPSHALDLIRDKNIILLMDSHLEGNFSTEEATTVVG 292
Query: 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
LASQCLQYEPRERP+TK+LV TLA L+TK DVPS VML + KHE+A TPQ PLSP+ EA
Sbjct: 293 LASQCLQYEPRERPNTKDLVATLAPLKTKPDVPSYVMLGIPKHEDAPPTPQHPLSPMGEA 352
Query: 361 CSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAID 420
CSR+DLTAIHQILVM HYRDD+ T+ELSFQEWTQQMRDMLEARK+GD AFRDKDFKTAID
Sbjct: 353 CSRLDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDKDFKTAID 412
Query: 421 YYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480
YSQF++V MVSPTVYARRSLC+L D+ DAAL DAMQAQC +PDWPTAFYMQSVAL+K
Sbjct: 413 CYSQFVDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAK 472
Query: 481 LDMQKDAADMLLEGAALEEKRQRGARAS 508
LDM KDAADML E A LEEKRQ+G R S
Sbjct: 473 LDMHKDAADMLNEAAGLEEKRQKGGRGS 500
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103071|ref|XP_002312914.1| predicted protein [Populus trichocarpa] gi|222849322|gb|EEE86869.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/510 (77%), Positives = 430/510 (84%), Gaps = 14/510 (2%)
Query: 1 MGCCESSFLKETQRERD--EVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFS 58
MGCC SS L ET E+D + + PL + T P+ F EFS
Sbjct: 1 MGCCCSSILAETHPEKDHKKTHQQHPLNPSGSIVLDPATGIPS------------FCEFS 48
Query: 59 FLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAE 118
F DL+ ATNNFS DNIVSESGEKA N+VYKGRL+NR+ IAVKKFTK+AWPDP QF EEA
Sbjct: 49 FPDLKTATNNFSPDNIVSESGEKAPNLVYKGRLQNRRSIAVKKFTKMAWPDPKQFAEEAW 108
Query: 119 GVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIA 178
GVGK R K+LANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVA YIA
Sbjct: 109 GVGKFRHKKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 168
Query: 179 EALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLK 238
EALDYC++EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPEYL+
Sbjct: 169 EALDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLR 228
Query: 239 NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
NGRV PESVIYSFGTVLLDLLSGKHIPPSHA+DMIRG+N+ LLMDSHLEG FS+EEAT V
Sbjct: 229 NGRVTPESVIYSFGTVLLDLLSGKHIPPSHAIDMIRGKNITLLMDSHLEGNFSTEEATVV 288
Query: 299 VGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLA 358
VGLASQCLQYEPRERPSTK+LV TLA LQTK DVPS VML +SKHEEA +TPQRPLSP+
Sbjct: 289 VGLASQCLQYEPRERPSTKDLVTTLAPLQTKPDVPSYVMLGISKHEEAPATPQRPLSPMG 348
Query: 359 EACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTA 418
EACSRMDLTAIHQILVM HY+DD+ T+ELSFQEWTQQMRDMLE+RK+GD AFRDKDFKTA
Sbjct: 349 EACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLESRKRGDFAFRDKDFKTA 408
Query: 419 IDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478
ID YSQFI+V MVSPTV+ARRSLC L D+ DAAL DAMQAQC +PDWPTAFYMQSVAL
Sbjct: 409 IDCYSQFIDVGTMVSPTVFARRSLCFLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVAL 468
Query: 479 SKLDMQKDAADMLLEGAALEEKRQRGARAS 508
+KLDM DAADML E AALEEK+QRG + S
Sbjct: 469 AKLDMHNDAADMLNEAAALEEKKQRGGKGS 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18418600|ref|NP_567980.1| BR-signaling kinase 1 [Arabidopsis thaliana] gi|75331881|sp|Q944A7.1|Y4523_ARATH RecName: Full=Probable serine/threonine-protein kinase At4g35230 gi|16612249|gb|AAL27496.1|AF439824_1 AT4g35230/F23E12_210 [Arabidopsis thaliana] gi|22655470|gb|AAM98327.1| At4g35230/F23E12_210 [Arabidopsis thaliana] gi|332661082|gb|AEE86482.1| BR-signaling kinase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/513 (76%), Positives = 432/513 (84%), Gaps = 6/513 (1%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEA-STESDTATPTATVQPTNEEA----PLFS 55
MGCC+S F + +D V +PL+Q +T +D P FS
Sbjct: 1 MGCCQSLFSGDNPLGKDGV-QPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFS 59
Query: 56 EFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKE 115
EFSF DL+AATNNFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWP+P QF E
Sbjct: 60 EFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEPKQFAE 119
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAF 175
EA GVGKLR RLANLIGYCC GDERLLVAE+MPNDTLAKHLFHWE QTIEW +RLRV +
Sbjct: 120 EAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGY 179
Query: 176 YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPE 235
YIAEALDYC+TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPE
Sbjct: 180 YIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
YL+NGRV PESV YSFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEGKFS+EEA
Sbjct: 240 YLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEA 299
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLS 355
T VV LASQCLQYEPRERP+TK+LV TLA LQTKSDVPS VML + K EEA STPQRPLS
Sbjct: 300 TVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPLS 359
Query: 356 PLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDF 415
PL EACSRMDLTAIHQILVM HYRDD+ T+ELSFQEWTQQM+DML+ARK+GD +FR+KDF
Sbjct: 360 PLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFREKDF 419
Query: 416 KTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475
KTAID YSQFI+V MVSPTV+ RRSLC+L D+ DAAL DAMQAQC +PDWPTAFYMQS
Sbjct: 420 KTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQS 479
Query: 476 VALSKLDMQKDAADMLLEGAALEEKRQRGARAS 508
VAL+KL+M DAADML E A LEEKRQRG R S
Sbjct: 480 VALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359474808|ref|XP_002281613.2| PREDICTED: probable serine/threonine-protein kinase At4g35230 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/501 (77%), Positives = 429/501 (85%), Gaps = 8/501 (1%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MGCCESSFL ET E+D+ Q ++ + P + P + P FSEFSF
Sbjct: 1 MGCCESSFLTETHPEKDD--------QHHHNNSHNTQNPPFSPPSPADGGVPSFSEFSFS 52
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV 120
DL+AATNNFSSD+IVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWPDP QF EEA GV
Sbjct: 53 DLKAATNNFSSDSIVSESGEKAPNIVYKGRLQNRRWIAVKKFTKMAWPDPKQFAEEAWGV 112
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
G+LR +RLANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVA +IAEA
Sbjct: 113 GRLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALFIAEA 172
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG 240
LD+C+TE R LYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPEYL+NG
Sbjct: 173 LDFCSTESRSLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNG 232
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
RV PESVIYSFGTVLLDLLSGKHIPPSHALD+IR +N+ LLMDSHLEG FS+EEAT VVG
Sbjct: 233 RVTPESVIYSFGTVLLDLLSGKHIPPSHALDLIRDKNIILLMDSHLEGNFSTEEATTVVG 292
Query: 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
LASQCLQYEPRERP+TK+LV TLA L+TK DVPS VML + KHE+A TPQ PLSP+ EA
Sbjct: 293 LASQCLQYEPRERPNTKDLVATLAPLKTKPDVPSYVMLGIPKHEDAPPTPQHPLSPMGEA 352
Query: 361 CSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAID 420
CSR+DLTAIHQILVM HYRDD+ T+ELSFQEWTQQMRDMLEARK+GD AFRDKDFKTAID
Sbjct: 353 CSRLDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDKDFKTAID 412
Query: 421 YYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480
YSQF++V MVSPTVYARRSLC+L D+ DAAL DAMQAQC +PDWPTAFYMQSVAL+K
Sbjct: 413 CYSQFVDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAK 472
Query: 481 LDMQKDAADMLLEGAALEEKR 501
LDM KDAADML E A LEEKR
Sbjct: 473 LDMHKDAADMLNEAAGLEEKR 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147797812|emb|CAN74078.1| hypothetical protein VITISV_000979 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/508 (76%), Positives = 423/508 (83%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MGCC+SS K T+ E+D L ++ A P FSEFS
Sbjct: 1 MGCCQSSLFKRTRSEKDRYPQTTGLNHTPPSNGTDAAAAGVGDGGGGAGGVPAFSEFSLA 60
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV 120
DL+AATNNFSSD IVSESGEKA NVVYKGRL+NR+WIAVKKFTK+AWPDP QF +EA GV
Sbjct: 61 DLKAATNNFSSDFIVSESGEKAPNVVYKGRLQNRRWIAVKKFTKLAWPDPKQFADEAWGV 120
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
GKLR +RLANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVA YIAEA
Sbjct: 121 GKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 180
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG 240
LDYC+ EGRPLYHDLNAYRVLFDE+GDPRLSCFG+MKNS DGKSYSTNLAYTPPEYL+NG
Sbjct: 181 LDYCSAEGRPLYHDLNAYRVLFDENGDPRLSCFGMMKNSRDGKSYSTNLAYTPPEYLRNG 240
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
RV PESVI+SFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEG FS+EEAT V
Sbjct: 241 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIPLLMDSHLEGNFSTEEATVVFE 300
Query: 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
LASQCLQYEPRERPS +NLV TLA LQ K DVPS VML + KHEEA TPQ PLSP+ +A
Sbjct: 301 LASQCLQYEPRERPSPRNLVETLAPLQNKPDVPSYVMLGIPKHEEAPPTPQHPLSPMGDA 360
Query: 361 CSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAID 420
C+RMDLTAIHQILVM HY+DD+ T+ELSFQEWTQQMRDMLEARK+GD AFRDKDFKTAID
Sbjct: 361 CTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAID 420
Query: 421 YYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480
YSQFI+V MVSPTVYARRSLC+L D+ D AL DAMQAQC +PDW TAFYMQ+VAL+K
Sbjct: 421 CYSQFIDVGTMVSPTVYARRSLCYLLCDQPDTALRDAMQAQCVYPDWSTAFYMQAVALAK 480
Query: 481 LDMQKDAADMLLEGAALEEKRQRGARAS 508
LDM KDAADML E AALEEKRQRG R S
Sbjct: 481 LDMHKDAADMLNEAAALEEKRQRGGRGS 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459846|ref|XP_002285926.1| PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform 1 [Vitis vinifera] gi|302141672|emb|CBI18875.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/508 (76%), Positives = 423/508 (83%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFL 60
MGCC+SS K T+ ++D L ++ A P FSEFS
Sbjct: 1 MGCCQSSLFKRTRSDKDRYPQTTGLNHTPPSNGTDAAAAGVGDGGEGAGGVPAFSEFSLA 60
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV 120
DL+AATNNFSSD IVSESGEKA NVVYKGRL+NR+WIAVKKFTK+AWPDP QF +EA GV
Sbjct: 61 DLKAATNNFSSDFIVSESGEKAPNVVYKGRLQNRRWIAVKKFTKLAWPDPKQFADEAWGV 120
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
GKLR +RLANLIGYCC GDERLLVAEYMPNDTLAKHLFHWE QTIEW +RLRVA YIAEA
Sbjct: 121 GKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 180
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG 240
LDYC+ EGRPLYHDLNAYRVLFDE+GDPRLSCFG+MKNS DGKSYSTNLAYTPPEYL+NG
Sbjct: 181 LDYCSAEGRPLYHDLNAYRVLFDENGDPRLSCFGMMKNSRDGKSYSTNLAYTPPEYLRNG 240
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
RV PESVI+SFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEG FS+EEAT V
Sbjct: 241 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIPLLMDSHLEGNFSTEEATVVFE 300
Query: 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
LASQCLQYEPRERPS +NLV TLA LQ K DVPS VML + KHEEA TPQ PLSP+ +A
Sbjct: 301 LASQCLQYEPRERPSPRNLVETLAPLQNKPDVPSYVMLGIPKHEEAPPTPQHPLSPMGDA 360
Query: 361 CSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAID 420
C+RMDLTAIHQILVM HY+DD+ T+ELSFQEWTQQMRDMLEARK+GD AFRDKDFKTAID
Sbjct: 361 CTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAID 420
Query: 421 YYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480
YSQFI+V MVSPTVYARRSLC+L D+ D AL DAMQAQC +PDW TAFYMQ+VAL+K
Sbjct: 421 CYSQFIDVGTMVSPTVYARRSLCYLLCDQPDTALRDAMQAQCVYPDWSTAFYMQAVALAK 480
Query: 481 LDMQKDAADMLLEGAALEEKRQRGARAS 508
LDM KDAADML E AALEEKRQRG R S
Sbjct: 481 LDMHKDAADMLNEAAALEEKRQRGGRGS 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3080427|emb|CAA18746.1| putative protein [Arabidopsis thaliana] gi|7270475|emb|CAB80240.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/525 (75%), Positives = 432/525 (82%), Gaps = 18/525 (3%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEA-STESDTATPTATVQPTNEEA----PLFS 55
MGCC+S F + +D V +PL+Q +T +D P FS
Sbjct: 1 MGCCQSLFSGDNPLGKDGV-QPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFS 59
Query: 56 EFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKE 115
EFSF DL+AATNNFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWP+P QF E
Sbjct: 60 EFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEPKQFAE 119
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAF 175
EA GVGKLR RLANLIGYCC GDERLLVAE+MPNDTLAKHLFHWE QTIEW +RLRV +
Sbjct: 120 EAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGY 179
Query: 176 YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPE 235
YIAEALDYC+TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPE
Sbjct: 180 YIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
YL+NGRV PESV YSFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEGKFS+EEA
Sbjct: 240 YLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEA 299
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLS 355
T VV LASQCLQYEPRERP+TK+LV TLA LQTKSDVPS VML + K EEA STPQRPLS
Sbjct: 300 TVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPLS 359
Query: 356 PLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDF 415
PL EACSRMDLTAIHQILVM HYRDD+ T+ELSFQEWTQQM+DML+ARK+GD +FR+KDF
Sbjct: 360 PLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFREKDF 419
Query: 416 KTAIDYYS------------QFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA 463
KTAID YS QFI+V MVSPTV+ RRSLC+L D+ DAAL DAMQAQC
Sbjct: 420 KTAIDCYSQNSYGYIHCFCGQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCV 479
Query: 464 HPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGARAS 508
+PDWPTAFYMQSVAL+KL+M DAADML E A LEEKRQRG R S
Sbjct: 480 YPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 524
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798402|ref|XP_002867085.1| hypothetical protein ARALYDRAFT_328224 [Arabidopsis lyrata subsp. lyrata] gi|297312921|gb|EFH43344.1| hypothetical protein ARALYDRAFT_328224 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/525 (74%), Positives = 430/525 (81%), Gaps = 20/525 (3%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEA-STESDTATPTATVQPTNEEA------PL 53
MGCC+S E +D +PL+Q +T +D + P
Sbjct: 1 MGCCQSLCSGENPLGKDGA-QPQPLSQNHHGGATAADNGGIGSGGASGVGGGGGGGGIPS 59
Query: 54 FSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQF 113
FSEFSF DL+AATNNFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWP+P QF
Sbjct: 60 FSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKLAWPEPKQF 119
Query: 114 KEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRV 173
EEA GVGKLR RLANLIGYCC GDERLLVAE+MPNDTLAKHLFHWE QTIEW +RLRV
Sbjct: 120 AEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRV 179
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
+YIAEALDYC+TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTP
Sbjct: 180 GYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTP 239
Query: 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293
PEYL+NGRV PESV YSFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEGKFS+E
Sbjct: 240 PEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTE 299
Query: 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRP 353
EAT VV LASQCLQYEPRERP+TK+LV TLA LQTKSDVPS VML + K EEA STPQRP
Sbjct: 300 EATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRP 359
Query: 354 LSPLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDK 413
LSPL EACSRMDLTAIHQILVM HYRDD+ T+ELSFQEWTQQM+DML+ARK+GD +FR+K
Sbjct: 360 LSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFREK 419
Query: 414 DFKTAIDYYS------------QFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQ 461
DFKTAID YS QFI+V MVSPTV+ RRSLC+L D+ DAAL DAMQAQ
Sbjct: 420 DFKTAIDCYSQNSYGYIHCFCGQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQ 479
Query: 462 CAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506
C +PDWPTAFYMQSVAL+KL+M DAADML E A LEEKRQRG R
Sbjct: 480 CVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGR 524
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 508 | ||||||
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.998 | 0.990 | 0.769 | 4.4e-210 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.889 | 0.924 | 0.629 | 1.4e-156 | |
| TAIR|locus:2036426 | 507 | BSK11 "brassinosteroid-signali | 0.980 | 0.982 | 0.564 | 1.7e-153 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.897 | 0.932 | 0.604 | 8.8e-150 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.885 | 0.918 | 0.609 | 1.6e-148 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.883 | 0.921 | 0.613 | 2.4e-147 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.883 | 0.921 | 0.606 | 6.6e-145 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.875 | 0.910 | 0.608 | 2.6e-143 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.864 | 0.908 | 0.571 | 1.3e-132 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.879 | 0.937 | 0.542 | 2.5e-129 |
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2031 (720.0 bits), Expect = 4.4e-210, P = 4.4e-210
Identities = 395/513 (76%), Positives = 435/513 (84%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKE--ASTESDTATPTATVQPTNEEA---PLFS 55
MGCC+S F + +D V + PL+Q A+T + + A+ P FS
Sbjct: 1 MGCCQSLFSGDNPLGKDGVQPQ-PLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFS 59
Query: 56 EFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKE 115
EFSF DL+AATNNFSSDNIVSESGEKA N+VYKGRL+NR+WIAVKKFTK+AWP+P QF E
Sbjct: 60 EFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEPKQFAE 119
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAF 175
EA GVGKLR RLANLIGYCC GDERLLVAE+MPNDTLAKHLFHWE QTIEW +RLRV +
Sbjct: 120 EAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGY 179
Query: 176 YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPE 235
YIAEALDYC+TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS DGKSYSTNLAYTPPE
Sbjct: 180 YIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
YL+NGRV PESV YSFGTVLLDLLSGKHIPPSHALDMIRG+N+ LLMDSHLEGKFS+EEA
Sbjct: 240 YLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEA 299
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLS 355
T VV LASQCLQYEPRERP+TK+LV TLA LQTKSDVPS VML + K EEA STPQRPLS
Sbjct: 300 TVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPLS 359
Query: 356 PLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDF 415
PL EACSRMDLTAIHQILVM HYRDD+ T+ELSFQEWTQQM+DML+ARK+GD +FR+KDF
Sbjct: 360 PLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFREKDF 419
Query: 416 KTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475
KTAID YSQFI+V MVSPTV+ RRSLC+L D+ DAAL DAMQAQC +PDWPTAFYMQS
Sbjct: 420 KTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQS 479
Query: 476 VALSKLDMQKDAADMLLEGAALEEKRQRGARAS 508
VAL+KL+M DAADML E A LEEKRQRG R S
Sbjct: 480 VALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 286/454 (62%), Positives = 363/454 (79%)
Query: 49 EEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP 108
++ P F+EFSF LRAAT FS+D+IVSE G KA NVVYKGRLE+ +WIAVK+F + AWP
Sbjct: 32 DDLPSFTEFSFDQLRAATCGFSTDSIVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWP 91
Query: 109 DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWP 168
D QF EEA+ VG+LR +RLANLIG+CC GDERLLVAE+MP +TL+KHLFHW+ Q ++W
Sbjct: 92 DTRQFLEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWS 151
Query: 169 LRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
+RLRVA Y+A+AL+YC+++GR LYHDLNAYR+LFD+DG+PRLSCFGLMKNS DGKSYSTN
Sbjct: 152 MRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 211
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
LA+TPPEYL+ GRVIPESV+YSFGT+LLDLLSGKHIPPSHALD+IRG+N +LMDS L+G
Sbjct: 212 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDG 271
Query: 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQS 348
FS+++ T +V LAS+CLQYE RERP+ K+LV +LA LQ ++D+PS+V++ + H A
Sbjct: 272 HFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIP-HGAASP 330
Query: 349 TPQRPLSPLAEACSRMDLTAIHQILVMAHYRDDKET-HELSFQEWTQQMRDMLEARKQGD 407
L+PL +ACSR DLTAIH+IL Y+DD+ +ELSFQ WT Q+++ L ++KQGD
Sbjct: 331 KETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGD 390
Query: 408 TAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW 467
AF+ KDF TA++ Y+QFI MVSPTV+ARR LC+L S+ AL DAMQAQ P+W
Sbjct: 391 AAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEW 450
Query: 468 PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501
PTAFY+Q+ AL L M KDA + L +G +LE K+
Sbjct: 451 PTAFYLQAAALFSLGMDKDACETLKDGTSLEAKK 484
|
|
| TAIR|locus:2036426 BSK11 "brassinosteroid-signaling kinase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1497 (532.0 bits), Expect = 1.7e-153, P = 1.7e-153
Identities = 287/508 (56%), Positives = 369/508 (72%)
Query: 1 MGCCESSFLKETQRERDEVMNERPLTQRKEASTESDTATPTATVQPTN----EEAPLFSE 56
MGCC+SSFLK + D+ + L+ R+ + A + + P FSE
Sbjct: 1 MGCCQSSFLKPSSLH-DKKITSDDLSGRRGKGAKRGNRHRHANINEGRGWHFSDVPDFSE 59
Query: 57 FSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRL---ENRQWIAVKKFTKVAWPDPTQF 113
FS LR ATNNF+ + +VS ++ N+VY+G + ++++ IAVKKF+K WPDP QF
Sbjct: 60 FSASVLRDATNNFNKNAVVSVCSDQEPNLVYQGCIRSDKDKRLIAVKKFSKTTWPDPKQF 119
Query: 114 KEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRV 173
EA +G LR RL NLIGYCC GDERLLV+EYMPN++L KHLFHWEKQT+EW +RLRV
Sbjct: 120 ATEARAIGSLRHVRLVNLIGYCCEGDERLLVSEYMPNESLTKHLFHWEKQTMEWAMRLRV 179
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
A Y+AEAL+YC G LYHDLN RVLFDE+G PRLSCFG MKNS DGK++STNLAYTP
Sbjct: 180 ALYVAEALEYCRQSGLKLYHDLNTCRVLFDENGSPRLSCFGWMKNSKDGKNFSTNLAYTP 239
Query: 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293
PEYL++G +IPESV++SFGT LLDLLSGKHIPPSHA+ I+ +NLN+LMDSHLEG + E
Sbjct: 240 PEYLRSGTLIPESVVFSFGTFLLDLLSGKHIPPSHAVGTIQKQNLNVLMDSHLEGNYPEE 299
Query: 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRP 353
+A V LAS+CL P ERP +++ + LQ K DVPS ML +SK E+ + + P
Sbjct: 300 DAAMVFDLASKCLHNNPNERPEIGDIISVITTLQQKLDVPSYTMLGISKLEKLEM--EHP 357
Query: 354 LSPLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDK 413
S + +AC +MDL A+HQIL Y++D+ T ELSFQ+W QQ++D+ R+QGD+AFR+K
Sbjct: 358 KSLIYDACHQMDLAALHQILEAMEYKEDEVTCELSFQQWAQQIKDVCNTRQQGDSAFRNK 417
Query: 414 DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYM 473
F++AID Y+QFI + IM+SPTVYARRS+C+LF D+ DAAL DAMQAQC + DWPTAFY+
Sbjct: 418 HFESAIDKYTQFIEIGIMISPTVYARRSMCYLFCDQPDAALRDAMQAQCVYSDWPTAFYL 477
Query: 474 QSVALSKLDMQKDAADMLLEGAALEEKR 501
Q+VALSKL+M +D+A ML E LE+KR
Sbjct: 478 QAVALSKLNMVEDSATMLKEALILEDKR 505
|
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
Identities = 278/460 (60%), Positives = 356/460 (77%)
Query: 48 NEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW 107
++E F EF +LR ATN FS IVSE GEKA NVVY+G+LE +A+K+F++ +W
Sbjct: 32 DQEIQNFKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSW 91
Query: 108 PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEW 167
PD QF EA GVGKLR KR+ +LIG C GDERLLVAEYMPNDTL+KHLFHWEKQ + W
Sbjct: 92 PDAQQFVVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPW 151
Query: 168 PLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227
+R+R+A YIAEALDYCN E R +YHDLNAYR+LFDE+GDPRLS FGLMKNS DGKSYST
Sbjct: 152 DMRVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYST 211
Query: 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287
NLAYTPPE+L+ GRVIPESVI+S+GT+LLDLLSGKHIPPSHALD+IRG+N LLMDS LE
Sbjct: 212 NLAYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLE 271
Query: 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQ 347
G++++++AT++V LAS+CLQ E ++RP TK L+ +A LQ + +V S+V++ + K+
Sbjct: 272 GQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVIL 331
Query: 348 STPQRPLSPLAEACSRMDLTAIHQILVMAHYRDDKET-HELSFQEWTQQMRDMLEARKQG 406
T LSPL +AC++MDL H IL+ YRD++ +ELSFQEWTQQ+++ML +K G
Sbjct: 332 PTM---LSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFG 388
Query: 407 DTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD 466
D AFRDKDFK +I+YYS+ + + + S TV+ARR+ +L +D+ + AL DAMQAQ P+
Sbjct: 389 DIAFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPE 448
Query: 467 WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506
WPTAFY+Q++ALSKL M+ DA DML +GAA + KRQ R
Sbjct: 449 WPTAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNSWR 488
|
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| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
Identities = 275/451 (60%), Positives = 346/451 (76%)
Query: 52 PLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPT 111
P F EF L++AT FSSDNIVSE GEKA NVVY+GRL++ + IAVK+F ++AW D
Sbjct: 36 PTFKEFKLEQLKSATGGFSSDNIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHR 95
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
QF +EA+ VG LR RLANLIG C G+ERLLVAE+MP++TLAKHLFHWE ++W +RL
Sbjct: 96 QFLDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRL 155
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY 231
RVA +A+AL+YC+ +GR LYHDLNAYRVLFD+DG+PRLSCFGLMKNS DGKSYSTNLA+
Sbjct: 156 RVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
Query: 232 TPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
TPPEYL+ GRV PESV++SFGTVLLDL+SGKHIPPSHALD+IRG+N +LMDS LEG FS
Sbjct: 216 TPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFS 275
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQ 351
+E+ T++V LA++CLQYE RERP+ K+LV +L LQ +SDV S V++ + EA+
Sbjct: 276 NEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESP 335
Query: 352 RPLSPLAEACSRMDLTAIHQILVMAHYRDDKE-THELSFQEWTQQMRDMLEARKQGDTAF 410
L+P +AC R+DLTAI +IL Y+DD+ +ELSFQ WT QM++ L ++KQGD AF
Sbjct: 336 LSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAF 395
Query: 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTA 470
R KDF TA+D Y+QFI+ MVSPTV+ARR L +L +D + AL DA+QAQ PDWPTA
Sbjct: 396 RSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTA 455
Query: 471 FYMQSVALSKLDMQKDAADMLLEGAALEEKR 501
Y+Q+ L KL M+ DA L +G LE K+
Sbjct: 456 LYLQAACLFKLGMEADAQQALKDGTTLEAKK 486
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 279/455 (61%), Positives = 347/455 (76%)
Query: 50 EAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD 109
+ P F EFS LR AT+ F+++NIVSE GEKA NVVYKG+L+N++ IAVK+F + AWPD
Sbjct: 37 DLPQFREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPD 96
Query: 110 PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL 169
QF EEA+ VG+LR R+ANL+G C G+ERLLVAE+MPN+TLAKHLFHWE Q ++W +
Sbjct: 97 SRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAM 156
Query: 170 RLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNL 229
RLRVA +IA+AL+YC +GR LYHDLNAYRVLFD+D +PRLSCFGLMKNS DGKSYSTNL
Sbjct: 157 RLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNL 216
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
A+TPPEYL+ GRV PESV+YS+GT+LLDLLSGKHIPPSHALD+IR N+ +L+DS LEG+
Sbjct: 217 AFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQ 276
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQST 349
FSS++ T+++ LAS+CLQYEPRERP+ K+LV + LQ + PS+ ++ + A +T
Sbjct: 277 FSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSHQLMGIPS--SASTT 334
Query: 350 PQRPLSPLAEACSRMDLTAIHQILVMAHYRDDK-ETHELSFQEWTQQMRDMLEARKQGDT 408
P LSPL EAC R DLTAIH+IL Y+DD+ ELSFQ WT QM+D L +K+GD
Sbjct: 335 P---LSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDV 391
Query: 409 AFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP 468
AFR K+F AID YSQFI MVSPTVYARRSLC+L ++ AL DAMQAQ P W
Sbjct: 392 AFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWH 451
Query: 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503
A Y+Q+VALS L + +A L +G+ LE KR R
Sbjct: 452 IASYLQAVALSALGQENEAHAALKDGSMLESKRNR 486
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 276/455 (60%), Positives = 348/455 (76%)
Query: 48 NEEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW 107
+ + P F EFS +R AT+ F+++NIVSE GE+A NVVYKG+LEN++ IAVK+F + +W
Sbjct: 35 SNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSW 94
Query: 108 PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEW 167
PD QF EEA+ VG+LR R+ANL+G C +ERLL+AE+MPN+TLAKHLFHWE Q ++W
Sbjct: 95 PDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKW 154
Query: 168 PLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227
+RLRVA +IA+AL+YC ++GR LYHDLNAYRVLFD+D +PRLSCFGLMKNS DGKSYST
Sbjct: 155 AMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYST 214
Query: 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287
NLA+TPPEYL+ GRV PESVIYSFGT+LLDLLSGKHIPPSHALD+IR N+ +LMDS LE
Sbjct: 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLE 274
Query: 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQ 347
G+FSS++ T+++ LAS+CLQYEPRERP+ K+LV + LQ ++ S+ +L V A
Sbjct: 275 GQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPN--SAT 332
Query: 348 STPQRPLSPLAEACSRMDLTAIHQILVMAHYRDDK-ETHELSFQEWTQQMRDMLEARKQG 406
+T LSPL EAC R DLTAIH+I+ Y+DD+ T ELSFQ WT QM+D L +K+G
Sbjct: 333 TTA---LSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKG 389
Query: 407 DTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD 466
D+AFR KDF AI+ YSQFI V M SPTV+AR+SLC+L +D AL +AMQAQ P
Sbjct: 390 DSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPA 449
Query: 467 WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501
W A Y+Q+VALS L + +A L +GA LE KR
Sbjct: 450 WHIASYLQAVALSALGQENEAHTALKDGAMLESKR 484
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 275/452 (60%), Positives = 348/452 (76%)
Query: 50 EAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD 109
+ P F E++ L+AAT+ F+ + IVSE GEKA NVVYKG+LEN++ IAVK+FT++AWPD
Sbjct: 36 DVPNFREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPD 95
Query: 110 PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPL 169
QF EEA VG+LR +R+ANL+G CC GDERLLVAE+MPN+TLAKHLFHWE Q ++W +
Sbjct: 96 SRQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTM 155
Query: 170 RLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNL 229
RLRV Y+A+AL+YC ++GR LYHDLNAYRVLFDE+ +PRLS FGLMKNS DGKSYSTNL
Sbjct: 156 RLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNL 215
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
A+TPPEYL+ GR+ PESVIYSFGT+LLDLLSGKHIPPSHALD+IR NL L DS L+G+
Sbjct: 216 AFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQ 275
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQST 349
FS + T++V LAS+CLQYE RERP+TK+LV L LQ +++V S+V++ + H + S
Sbjct: 276 FSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLP-HSGSVS- 333
Query: 350 PQRPLSPLAEACSRMDLTAIHQILVMAHYRDDKE-THELSFQEWTQQMRDMLEARKQGDT 408
PLSPL EACSR DLTA+ +IL Y+DD+ T+ELSF WT QM++ L ++K+GD
Sbjct: 334 ---PLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDV 390
Query: 409 AFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP 468
AFR KDF+ AI+ Y+QFI+ M+SPTV ARRSLC+L SD AL DA+QAQ P W
Sbjct: 391 AFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWH 449
Query: 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500
A Y+QS +L L M+K++ L EG+ LE K
Sbjct: 450 VASYLQSASLGILGMEKESQIALKEGSNLEAK 481
|
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| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1300 (462.7 bits), Expect = 1.3e-132, P = 1.3e-132
Identities = 256/448 (57%), Positives = 332/448 (74%)
Query: 54 FSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQF 113
F E+S L+ AT+ F+ +N+VSE GE A NVVY+G+LEN IA+K+F+ AWPDP QF
Sbjct: 38 FREYSLEQLKIATSCFALENVVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQF 97
Query: 114 KEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRV 173
EEA VG+LR KR+ANL+GYCC G ERLLVAE+MPN+TLAKHLFHW+ + ++W +RLRV
Sbjct: 98 LEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRV 157
Query: 174 AFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP 233
A YI+EAL+YC+ G LYHDLNAYRVLFDE+ +PRLS FGLMKNS DGKSYSTNLA+TP
Sbjct: 158 ALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTP 217
Query: 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293
PEYL+ GR+ ESVIYSFGT+LLDLL+GKHIPPSHALD+IR NL L DS LEG+FS
Sbjct: 218 PEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDS 277
Query: 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRP 353
+ T++V L S CLQYE RERP+ K+LV L LQ ++V S+V++ + + S P
Sbjct: 278 DGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPP--- 334
Query: 354 LSPLAEACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDK 413
SP AEACS DLT++ +IL Y+DD++ LSF WT+QM++ + ++K+GD AFR K
Sbjct: 335 -SPFAEACSGKDLTSMVEILEKIGYKDDED---LSFM-WTEQMQEAINSKKKGDIAFRRK 389
Query: 414 DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYM 473
DF AI++Y+QF+++ M+S TV RRS +L S+ + AL DAM+AQ P W A Y+
Sbjct: 390 DFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYL 448
Query: 474 QSVALSKLDMQKDAADMLLEGAALEEKR 501
QS ALS L M+K++ L EG+ LE ++
Sbjct: 449 QSAALSVLGMEKESQIALTEGSILEARK 476
|
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| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 245/452 (54%), Positives = 331/452 (73%)
Query: 52 PLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPT 111
P F EFS LR AT+ FS+DNIVSE E+ N+VYKG+L + + IAVK+F +++WPD
Sbjct: 24 PNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVKRFQRLSWPDSL 83
Query: 112 QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
+F EEA+ VG+ R + +ANLIG C G ERLLVAEYMPN+TLAKHLFHWEK+ ++W +RL
Sbjct: 84 EFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEMRL 143
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY 231
RVA + A AL+YCN G LYHDLN YR+LFD+ G+PRLSCFGLMK S +GKSYSTNLA+
Sbjct: 144 RVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNLAF 203
Query: 232 TPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
PPEYL+ G VIPESV +SFGT+LLDL+SG+HIPP+HALD+ RG+N +LMDS L+G+FS
Sbjct: 204 APPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFS 263
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVM---LRVSKHEEAQS 348
E+ T+++ LAS+CL+ EP ERPS K L+ L+RL+ ++++ NV + + E +
Sbjct: 264 DEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTPSYTEPAT 323
Query: 349 TPQRPLSPLAEACSRMDLTAIHQILVMAHYRDDKE--THELSFQEWTQQMRDMLEARKQG 406
PL+P EAC R+DL+ +H++L Y +D T+E SFQ WT QM++ ++ +K G
Sbjct: 324 KEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQENMDYKKHG 383
Query: 407 DTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD 466
D AFR KDF+TAI++Y++F++ +VSPTV ARR LC+L SD AL DAMQ Q A P+
Sbjct: 384 DAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQTQVASPE 443
Query: 467 WPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
+ A Y+Q+ L KL M+ +A + L G++LE
Sbjct: 444 FSIALYLQAACLLKLGMEAEAKEALRHGSSLE 475
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q944A7 | Y4523_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7680 | 0.9980 | 0.9902 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00036214001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (500 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 508 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-27 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-19 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 7e-16 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-15 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-15 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-15 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-13 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-13 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-13 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 9e-13 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 5e-12 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-11 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-10 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 5e-10 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 8e-10 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-09 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 7e-09 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 4e-08 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-08 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-07 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-07 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-07 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 3e-07 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 3e-07 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-07 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-07 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 4e-07 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-07 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 5e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 6e-07 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 7e-07 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 8e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 9e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-06 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 2e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 4e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 5e-06 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 6e-06 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 6e-06 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 6e-06 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 9e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 9e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 9e-06 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-05 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-05 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 1e-05 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 2e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-05 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 2e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-05 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 3e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 3e-05 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-05 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 4e-05 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 5e-05 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 5e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 6e-05 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 6e-05 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 7e-05 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 8e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 1e-04 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-04 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 1e-04 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 1e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-04 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 2e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-04 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-04 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 3e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 3e-04 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 5e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 5e-04 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-04 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 5e-04 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 7e-04 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 8e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 9e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.001 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 0.001 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.001 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 0.002 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 0.002 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 0.002 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 0.002 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 0.002 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 0.002 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 0.002 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 0.003 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 0.003 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 0.004 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 0.004 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 0.004 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 0.004 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 0.004 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 6e-27
Identities = 61/242 (25%), Positives = 86/242 (35%), Gaps = 49/242 (20%)
Query: 85 VVYKGR-LENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142
VY R + + +A+K K + E E + KL + L G +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVL 201
LV EY +L L E + LR+ I E L+Y ++ G + H DL +L
Sbjct: 68 LVMEYCEGGSLKDLLKENEG-KLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 202 FDED-GDPRLSCFGLMKNSMDGKSYST----NLAYTPPEYLKNGRVIPESV-IYSFGTVL 255
D D G +L+ FGL K KS AY PE L E I+S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 256 LDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+L D+IR + LQ +P +RPS
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 316 TK 317
K
Sbjct: 208 AK 209
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 2e-19
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 28/253 (11%)
Query: 85 VVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKE---EAEGVGKLRRKRLANLIGYCCAGDE 140
VYK + + + +AVK K + + + E + +L + LI D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDH 72
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYR 199
LV EY L +L + ++A I L+Y ++ G + H DL
Sbjct: 73 LYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPEN 128
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESV-IYSFGTV 254
+L DE+G +++ FGL K + S T TP PE L G V ++S G +
Sbjct: 129 ILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVI 188
Query: 255 LLDLLSGKHIPPS-------HALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
L +LL+GK + I G L + SEEA ++ +CL
Sbjct: 189 LYELLTGKPPFSGENILDQLQLIRRILGPPLEF---DEPKWSSGSEEAKDLI---KKCLN 242
Query: 308 YEPRERPSTKNLV 320
+P +RP+ + ++
Sbjct: 243 KDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 7e-16
Identities = 57/255 (22%), Positives = 87/255 (34%), Gaps = 40/255 (15%)
Query: 85 VVYKGR-LENRQWIAVKKFTKV-AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142
VY R + + +A+K K D + E + + KL+ + L D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY---IAEALDYCNTEGRPLYHDLN-AY 198
LV EY L L + + + FY I AL+Y H +
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDE-----ARFYLRQILSALEYL--------HSKGIVH 120
Query: 199 R------VLFDEDGDPRLSCFGLMKNSMDGKSYSTN---LAYTPPEYLKNGRVIPESVIY 249
R +L DEDG +L+ FGL + G+ +T Y PE L I+
Sbjct: 121 RDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIW 180
Query: 250 SFGTVLLDLLSGK-----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304
S G +L +LL+GK I E S E L +
Sbjct: 181 SLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP---EWDISPE----AKDLIRK 233
Query: 305 CLQYEPRERPSTKNL 319
L +P +R + +
Sbjct: 234 LLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 1e-15
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 40/259 (15%)
Query: 85 VVYKGRLENRQW-----IAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGYCC 136
VYKG L+ + +AVK + A Q F EA + KL + L+G C
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDA--SEQQIEEFLREARIMRKLDHPNIVKLLGVCT 71
Query: 137 AGDERLLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
+ ++V EYMP D L K+ + + L A IA ++Y E +
Sbjct: 72 EEEPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEY--LESKNFI 125
Query: 193 H-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPES 246
H DL A L E+ ++S FGL ++ D Y + PE LK G+ +S
Sbjct: 126 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKS 185
Query: 247 VIYSFGTVLLDLLS-GK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
++SFG +L ++ + G+ + + L+ ++ + E + L
Sbjct: 186 DVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPN------CPPE---LYKL 236
Query: 302 ASQCLQYEPRERPSTKNLV 320
QC +P +RP+ LV
Sbjct: 237 MLQCWAEDPEDRPTFSELV 255
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 1e-15
Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 41/262 (15%)
Query: 85 VVYKGRLENRQW-----IAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGYCC 136
VYKG+L+ + +AVK + A Q F EA + KL + L+G C
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71
Query: 137 AGDERLLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
+ +V EYM L K+ + + L A IA ++Y E +
Sbjct: 72 EEEPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEY--LESKNFI 124
Query: 193 H-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPES 246
H DL A L E+ ++S FGL ++ D Y + PE LK G+ +S
Sbjct: 125 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKS 184
Query: 247 VIYSFGTVLLDLLS-GK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
++SFG +L ++ + G+ + L+ ++ + E + L
Sbjct: 185 DVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPN------CPPE---LYDL 235
Query: 302 ASQCLQYEPRERPSTKNLVVTL 323
QC +P +RP+ LV L
Sbjct: 236 MLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 1e-15
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 14/245 (5%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V G ++ +AVK + F EA + LR L L+G G+ +V
Sbjct: 22 VMLGDYRGQK-VAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
EYM +L +L + I +L A + E ++Y E + H DL A VL E
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEY--LEEKNFVHRDLAARNVLVSE 137
Query: 205 DGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH 263
D ++S FGL K + G S + +T PE L+ + +S ++SFG +L ++ S
Sbjct: 138 DLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
Query: 264 IP-PSHAL-DMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVV 321
+P P L D++ M++ EG +V + C + +P +RP+ K L
Sbjct: 198 VPYPRIPLKDVVPHVEKGYRMEAP-EGC-----PPEVYKVMKDCWELDPAKRPTFKQLRE 251
Query: 322 TLARL 326
LA +
Sbjct: 252 QLALI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 1e-15
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 34/270 (12%)
Query: 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN 130
+N++S + A+ YKG+ ++N VK+ V ++ + +GKL+ +
Sbjct: 695 ENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVK 747
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDY--CNTEG 188
LIG C + L+ EY+ L++ L + + W R ++A IA+AL + C
Sbjct: 748 LIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKALRFLHCRCSP 802
Query: 189 RPLYHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGKSYSTNLAYTPPEYLKNGRVIPESV 247
+ +L+ +++ D +P L L D K + ++ AY PE + + +S
Sbjct: 803 AVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-AYVAPETRETKDITEKSD 860
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGE------------NLNLLMDSHLEGKFSS--E 293
IY FG +L++LL+GK P+ A + G +L++ +D + G S
Sbjct: 861 IYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQN 918
Query: 294 EATQVVGLASQCLQYEPRERPSTKNLVVTL 323
E +V+ LA C +P RP +++ TL
Sbjct: 919 EIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 75.6 bits (187), Expect = 2e-15
Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 32/258 (12%)
Query: 85 VVYKGRL-----ENRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLIGYCCAG 138
VYKG L +AVK + A + + F EEA + KL + L+G C G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+ +V EYMP L L + + L++A IA+ ++Y E + H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEY--LESKNFVHRDLAA 130
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYST------NLAYTPPEYLKNGRVIPESVIYSF 251
L E+ ++S FGL ++ + Y + + PE LK+G+ +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 252 GTVLLDLLSG-----KHIPPSHALDMIR-GENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
G +L ++ + + L+++ G L + E + L QC
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPDE----------LYELMLQC 240
Query: 306 LQYEPRERPSTKNLVVTL 323
Y+P +RP+ LV L
Sbjct: 241 WAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 69.6 bits (170), Expect = 2e-13
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F EE + KL K L L+G + +V E M L L + + L+
Sbjct: 46 FLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQ 104
Query: 173 VAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMK-NSMDGKSYSTNLA 230
+ +AE ++Y E + L H DL A +L EDG ++S FGL + SM + +
Sbjct: 105 FSLDVAEGMEY--LESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK 162
Query: 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGK 289
+T PE LK+ + +S ++S+G +L ++ S G+ P +L ++ +E
Sbjct: 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---------ECVEKG 213
Query: 290 FSSEEATQ----VVGLASQCLQYEPRERPSTKNLVVTLAR 325
+ E V L + C + EP++RPS L L +
Sbjct: 214 YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 5e-13
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 86 VYKGRLEN-----RQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAG 138
V R + + +AVK + + + F+ E E + L + + G C
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSL-NHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP 78
Query: 139 DER--LLVAEYMPNDTLAKHL-FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
R L+ EY+P+ +L +L H + I L + I + +DY ++ R ++ DL
Sbjct: 79 GGRSLRLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDL 135
Query: 196 NAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYSTNLAYTP-----PEYLKNGRVIPESVI 248
A +L + + ++S FGL K Y +P PE L+ + S +
Sbjct: 136 AARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDV 195
Query: 249 YSFGTVLLDLLS-GKH--IPPSHALDMIRGEN--------LNLLMDSHLEGKFSSEEA-- 295
+SFG L +L + G PP+ L MI L LL + + +
Sbjct: 196 WSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG---ERLPRPPSCP 252
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+V L C + EP++RPS +L++ + RL
Sbjct: 253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.3 bits (168), Expect = 6e-13
Identities = 58/188 (30%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+E+L LV EY P L HL + + E R FY AE AL+Y ++ G +Y D
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEE-----RARFYAAEIVLALEYLHSLG-IIYRD 118
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
L +L D DG +L+ FGL K S + TP PE L +S
Sbjct: 119 LKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWS 178
Query: 251 FGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSSEEATQVVGLASQC 305
G +L ++L+GK PP E+ + + L+ F S EA L S
Sbjct: 179 LGVLLYEMLTGK--PP------FYAEDRKEIYEKILKDPLRFPEFLSPEA---RDLISGL 227
Query: 306 LQYEPRER 313
LQ +P +R
Sbjct: 228 LQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.9 bits (167), Expect = 9e-13
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 85 VVYKGRLENR--QWI--AVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
VYKG+L+ + + AVK + A + F +EA + KL + L+G C +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 140 ERLLVAEYMPNDTLAKHL-------FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
LV EYM L +L EK T+ L A IA+ ++Y +
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY--LASKKFV 127
Query: 193 H-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPE 245
H DL A L ED ++S FGL ++ D Y + + PE LK+G +
Sbjct: 128 HRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSK 187
Query: 246 SVIYSFGTVLLDLLS-GKH----IPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
S ++SFG +L ++ + G + L+ +R + L + +E +++
Sbjct: 188 SDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR-KGYRLPKPEYC-----PDELYELM- 240
Query: 301 LASQCLQYEPRERPSTKNLV 320
C Q +P +RP+ LV
Sbjct: 241 --LSCWQLDPEDRPTFSELV 258
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 5e-12
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F E A + +L K L G C GDE ++V EY+ +L +L K I +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYL-KKNKNLINISWKLE 104
Query: 173 VAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---- 227
VA +A AL + E + L H ++ A VL + D + +K S G S +
Sbjct: 105 VAKQLAWALHF--LEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE 162
Query: 228 ----NLAYTPPEYLKNGRVIP-ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM 282
+ + PPE ++N + + + +SFGT L ++ SG P S ALD + L
Sbjct: 163 ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALDSQK--KLQFYE 219
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
D H + + + T++ L +QC+ YEP RPS + ++
Sbjct: 220 DRH---QLPAPKWTELANLINQCMDYEPDFRPSFRAII 254
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 65.1 bits (157), Expect = 2e-11
Identities = 62/275 (22%), Positives = 98/275 (35%), Gaps = 31/275 (11%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLR-RKRL 128
I+ + GE + VY R +R+ +A+K K +F E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 129 ANLIGYCCAGDERLLVAEYMPNDTLAKHL-FHWEKQTIEWPLRLRVAFYIAEALDYCNTE 187
L + LV EY+ +L L K + L + I AL+Y +++
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSC-FGLMKNSMDGKSYSTN----------LAYTPPEY 236
G ++ D+ +L D DG FGL K D S S+ Y PE
Sbjct: 121 G-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 237 LK---NGRVIPESVIYSFGTVLLDLLSGKH--------IPPSHALDMIRGENLNLLMDSH 285
L S I+S G L +LL+G S L +I L S
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL-ASP 238
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
L + L + L +P+ R S+ + +
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 4e-11
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 41/266 (15%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK----LRRKRL 128
I+ + G+ VYK R + +A+K + KE+ E + L++ +
Sbjct: 4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVI-------KLESKEKKEKIINEIQILKKCKH 56
Query: 129 ANLIGYCCA---GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALD 182
N++ Y + DE +V E+ +L L + E ++A+ E L+
Sbjct: 57 PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTE----SQIAYVCKELLKGLE 112
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKN 239
Y ++ G ++ D+ A +L DG+ +L FGL + ++ + + PE +
Sbjct: 113 YLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVING 171
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIPPSH------ALDMIRGENLNLLMDSHLEGKFSSE 293
++ I+S G ++L GK PP AL I L + S+
Sbjct: 172 KPYDYKADIWSLGITAIELAEGK--PPYSELPPMKALFKIATNGPPGL----RNPEKWSD 225
Query: 294 EATQVVGLASQCLQYEPRERPSTKNL 319
E + +CLQ P +RP+ + L
Sbjct: 226 EFKDFL---KKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 1e-10
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 16/257 (6%)
Query: 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGY 134
V E G +V+ G ++ +A+K + A + F EEA+ + KL +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
C LV E+M + L+ +L ++ L + + E + Y ++ D
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL-RAQRGKFSQETLLGMCLDVCEGMAYLE-SSNVIHRD 125
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIY 249
L A L E+ ++S FG+ + +D + S+ + ++ PE + +S ++
Sbjct: 126 LAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVW 185
Query: 250 SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEATQVVGLASQCLQ 307
SFG ++ ++ S P + + E + + + + +S+ +++ C +
Sbjct: 186 SFGVLMWEVFSEGKTPYENRSN---SEVVETINAGFRLYKPRLASQSVYELM---QHCWK 239
Query: 308 YEPRERPSTKNLVVTLA 324
P +RPS L+ LA
Sbjct: 240 ERPEDRPSFSLLLHQLA 256
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 5e-10
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 30/212 (14%)
Query: 77 ESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLA 129
E GE A VYKG L + +A+K + A P Q F++EAE + L+ +
Sbjct: 12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV 71
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHL----------FHWEKQTIEWPLR----LRVAF 175
L+G C ++ EY+ + L + L +T++ L L +A
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 176 YIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------ 228
IA ++Y ++ H DL A L E ++S FGL ++ Y
Sbjct: 132 QIAAGMEYLSS--HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLP 189
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+ + PPE + G+ ES I+SFG VL ++ S
Sbjct: 190 VRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 8e-10
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 11/243 (4%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V++G +NR +A+K F++E + + +LR K L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
E M +L L E Q + + +A +AE + Y E ++ DL A +L ED
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE-EQNSIHRDLAARNILVGED 140
Query: 206 GDPRLSCFGLMKNSMDG--KSYSTNLAY--TPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
+++ FGL + + S + Y T PE +G +S ++SFG +L ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 262 KHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+P M E + + + + + + L C EP +RPS K L
Sbjct: 201 GQVPYP---GMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLE--CWAAEPEDRPSFKALR 255
Query: 321 VTL 323
L
Sbjct: 256 EEL 258
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRL 171
F EA + +LR L L+G L +V EYM +L +L + + L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 172 RVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST-NL 229
+ + + EA++Y E H DL A VL ED ++S FGL K + + +
Sbjct: 106 KFSLDVCEAMEY--LEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMI--RGENLNLLMDSHL 286
+T PE L+ + +S ++SFG +L ++ S +P P L + R E MD
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMD--- 219
Query: 287 EGKFSSEEATQVV-GLASQCLQYEPRERPSTKNL 319
+ + VV + QC + RPS L
Sbjct: 220 ----APDGCPPVVYDVMKQCWHLDAATRPSFLQL 249
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-09
Identities = 61/247 (24%), Positives = 97/247 (39%), Gaps = 33/247 (13%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
VYKG L+ +AVK PD + F +EAE + + + LIG C +V
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
E +P +L L K+ ++ + + A E + H DL A L
Sbjct: 71 MELVPGGSLLTFL---RKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG 127
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTPPEYLKNGRVIPESVIYSFGTVLL 256
E+ ++S FG M +G Y+ + + +T PE L GR ES ++S+G +L
Sbjct: 128 ENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW 186
Query: 257 DLLSGKHIP-----PSHALDMI-RGENLNLLMDSHLEGKFSSEEAT--QVVGLASQCLQY 308
+ S P + I G + + + ++ L QC Y
Sbjct: 187 ETFSLGDTPYPGMSNQQTRERIESG------------YRMPAPQLCPEEIYRLMLQCWAY 234
Query: 309 EPRERPS 315
+P RPS
Sbjct: 235 DPENRPS 241
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 7e-09
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 26/262 (9%)
Query: 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGY 134
+ E G VV+ G+ + +A+K + A + F EEA+ + KL L L G
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 135 CCAGDERLLVAEYMPNDTLAKHL-FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
C +V EYM N L +L K EW L + + EA++Y + G ++
Sbjct: 68 CTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEW--LLDMCSDVCEAMEYLESNGF-IHR 124
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVI 248
DL A L ED ++S FGL + +D + S+ + + PPE R +S +
Sbjct: 125 DLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDV 184
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG------KFSSEEATQVVGLA 302
+SFG ++ ++ S +P R N ++ +S G K + E ++
Sbjct: 185 WSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAGYRLYRPKLAPTEVYTIMYS- 236
Query: 303 SQCLQYEPRERPSTKNLVVTLA 324
C +P +RP+ K L+ L
Sbjct: 237 --CWHEKPEDRPAFKKLLSQLT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 130 NLIGY--CCA--GDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYC 184
N++ Y CC+ G + L L+ EY+P +L +L K + L A I E + Y
Sbjct: 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL---PKHKLNLAQLLLFAQQICEGMAYL 123
Query: 185 NTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY-------STNLAYTPPEYL 237
+++ ++ DL A VL D D ++ FGL K +G Y + + + E L
Sbjct: 124 HSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL 182
Query: 238 KNGRVIPESVIYSFGTVLLDLLS---GKHIPPSHALDMI---RGENLNLLMDSHLEGKFS 291
K + S ++SFG L +LL+ K PP +MI +G+ + + LE
Sbjct: 183 KENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242
Query: 292 ----SEEATQVVGLASQCLQYEPRERPSTKNLV 320
+V L C + E + RP+ ++L+
Sbjct: 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLI 275
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V++G N +AVK K DP F EA+ + KLR +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
E M +L ++L + ++ P + +A +A + Y E + H DL A VL E
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAY--LEAQNYIHRDLAARNVLVGE 138
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+ +++ FGL + + + A +T PE R +S ++SFG +L +++
Sbjct: 139 NNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIV 198
Query: 260 SGKHIP 265
+ +P
Sbjct: 199 TYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 4e-08
Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 36/258 (13%)
Query: 86 VYKGRLENRQWIAVK---KFTKVAWPDPTQ-------FKEEAEGVGKLRRKRLANLIGYC 135
+YKG L + + + + V F E A + +L K L L G C
Sbjct: 11 IYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVC 70
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYC--------NTE 187
DE ++V EY+ L L H EK + +L VA +A AL Y N
Sbjct: 71 VR-DENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVC 128
Query: 188 GRPLY---HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIP 244
G+ + + LN V F + DP + L + + + PE ++NG+
Sbjct: 129 GKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERI-----PWIAPECIRNGQASL 183
Query: 245 ESV--IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302
+SFGT LL++ S P S + E D H + + ++ L
Sbjct: 184 TIAADKWSFGTTLLEICSNGEEPLS---TLSSSEKERFYQDQH---RLPMPDCAELANLI 237
Query: 303 SQCLQYEPRERPSTKNLV 320
+QC Y+P +RPS + ++
Sbjct: 238 NQCWTYDPTKRPSFRAIL 255
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 4e-08
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKH 156
+AVK + +F +EA + +++ L L+G C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 157 LFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGL 215
L +Q + + L +A I+ A++Y E + H DL A L E+ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEY--LEKKNFIHRDLAARNCLVGENHLVKVADFGL 150
Query: 216 MKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHA 269
+ M G +Y+ + + +T PE L + +S +++FG VLL ++ + P
Sbjct: 151 SR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG-VLLWEIATYGMSPYPG 208
Query: 270 LDMIRGENLNLLMDSHLEGKFSSEE----ATQVVGLASQCLQYEPRERPSTKNL 319
+D+ + L LE + E +V L C Q+ P +RPS +
Sbjct: 209 IDLSQVYEL-------LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 5e-08
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR ++L L Y
Sbjct: 15 GQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 71
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRA 130
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 131 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L + +P M+ E L+ + + E + L QC + EP E
Sbjct: 191 ILLTELTTKGRVPYP---GMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEE 246
Query: 313 RPSTKNL 319
RP+ + L
Sbjct: 247 RPTFEYL 253
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
+ E G VV G+ + +A+K + + + +F EEA+ + KL ++L L G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYG 66
Query: 134 YCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
C +V EYM N L +L K+ L L + + E + Y ++ + ++
Sbjct: 67 VCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQL-LEMCKDVCEGMAYLESK-QFIHR 124
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST-----NLAYTPPEYLKNGRVIPESVI 248
DL A L D+ G ++S FGL + +D + S+ + ++PPE L + +S +
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDV 184
Query: 249 YSFGTVLLDLLSGKHIP------PSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302
++FG ++ ++ S +P + +G L HL +SE+ ++
Sbjct: 185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR---LYRPHL----ASEKVYAIM--- 234
Query: 303 SQCLQYEPRERPSTKNLVVTL 323
C + ERP+ + L+ ++
Sbjct: 235 YSCWHEKAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 14/238 (5%)
Query: 86 VYKGRLE-NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
V+ GRL + +AVK + PD +F +EA + + + LIG C +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203
V E + L E ++ +++ A ++Y ++ ++ DL A L
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVT 128
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLD 257
E ++S FG+ + DG ST + +T PE L GR ES ++SFG +L +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 258 LLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS 315
S +P ++ + E + L +A V L +C +Y+P +RPS
Sbjct: 189 AFSLGAVPYANLSNQQTREAIE--QGVRLPCPELCPDA--VYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D LV M L H++H + E R FY AE L+ + E R +Y DL
Sbjct: 73 DALCLVLTLMNGGDLKFHIYHMGEAGFEEG---RAVFYAAEICCGLEDLHQE-RIVYRDL 128
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFG 252
+L D+ G R+S GL + +G K + Y PE +KN R ++ G
Sbjct: 129 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 188
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L ++++G+ P I+ E + L+ ++ ++S + + L L +P+E
Sbjct: 189 CLLYEMIAGQS-PFQQRKKKIKREEVERLV-KEVQEEYSEKFSPDARSLCKMLLCKDPKE 246
Query: 313 R 313
R
Sbjct: 247 R 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 26/260 (10%)
Query: 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGY 134
+ E G + VV K I K ++ + K+ + L + ++G+
Sbjct: 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLE-INEAIQKQILRELDILHKCNSPYIVGF 64
Query: 135 ---CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
+ + EYM +L K L + + E L ++A + + L Y + + + +
Sbjct: 65 YGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILG-KIAVAVLKGLTYLHEKHKII 123
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVI 248
+ D+ +L + G +L FG+ + NS+ K++ +Y PE ++ +S I
Sbjct: 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-AKTFVGTSSYMAPERIQGNDYSVKSDI 182
Query: 249 YSFGTVLLDLLSGKH-IPPSHAL-DMIRGENLNLL-----MDSHL--EGKFSSEEATQVV 299
+S G L++L +G+ PP + D I LL GKFS + V
Sbjct: 183 WSLGLSLIELATGRFPYPPENDPPDGI----FELLQYIVNEPPPRLPSGKFS-PDFQDFV 237
Query: 300 GLASQCLQYEPRERPSTKNL 319
+ CL +PRERPS K L
Sbjct: 238 ---NLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 74 IVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRK 126
+ E GE A V+ G + ++ +AVK + A D + F+ EAE + + +
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 127 RLANLIGYCCAGDERLLVAEYMPNDTLAKHL--------FHWEKQTIEWPLR----LRVA 174
+ G C GD ++V EYM + L K L F + L L++A
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 175 FYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------ 228
IA + Y ++ ++ DL L D ++ FG M Y+T+
Sbjct: 129 VQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFG-----MSRDVYTTDYYRVGG 182
Query: 229 -----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GK 262
+ + PPE + + ES ++SFG VL ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 3e-07
Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 18/248 (7%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
V+KG L+++ +AVK K P +F EA + + + LIG C +
Sbjct: 11 VFKGTLKDKTPVAVKT-CKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI 69
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLF 202
V E +P L K+ E + V F + A E + H DL A L
Sbjct: 70 VMELVPGGDFLSFL---RKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV 126
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLD 257
E+ ++S FG+ + DG S+ L +T PE L GR ES ++S+G +L +
Sbjct: 127 GENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWE 186
Query: 258 LLSGKHIP-PSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPST 316
S P P R + ++ + V + +C Y+P RP
Sbjct: 187 TFSLGVCPYPGMTNQQAREQ-----VEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKF 241
Query: 317 KNLVVTLA 324
L LA
Sbjct: 242 SELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 161 EKQTIEWPLRLRVAFYIAEALDYC----NTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216
E++ IE R+ + AL C + L+ DL + D + + +L FGL
Sbjct: 98 ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157
Query: 217 KN----SMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD- 271
K S K+Y Y PE L + +S I+S G ++ +L + PP A +
Sbjct: 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQ 215
Query: 272 -----MIRGENLNLLMDSHLEGKFS------SEEATQVVGLASQCLQYEPRERPSTKNL 319
I+ EGKF S E +V+ L +P +RPST+ L
Sbjct: 216 LQLASKIK------------EGKFRRIPYRYSSELNEVI---KSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 4e-07
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 32/275 (11%)
Query: 73 NIVSESGEKAANVVY--------KGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKL 123
++ E G+ + +VY KG E R +AVK + A + +F EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETR--VAVKTVNESASLRERIEFLNEASVMKGF 66
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAF 175
+ L+G G L+V E M + L +L + P R +++A
Sbjct: 67 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 126
Query: 176 YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------L 229
IA+ + Y N + + ++ DL A + D ++ FG+ ++ + Y +
Sbjct: 127 EIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 185
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEG 288
+ PE LK+G S ++SFG VL ++ S P + + L +MD +L+
Sbjct: 186 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDGGYLDQ 242
Query: 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ E +V L C Q+ P+ RP+ +V L
Sbjct: 243 PDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E R ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292
PE +K ++ I+S G ++L G+ PP+ L +R + L+ +
Sbjct: 169 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMR---VLFLIPKNSPPTLEG 223
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLV 320
+ + CL +PR RP+ K L+
Sbjct: 224 QYSKPFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V+ G +AVK K P F +EA+ + KLR +L L C + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
EYM +L L E + + P + +A IAE + Y E R H DL A +L E
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAY--LESRNYIHRDLAARNILVGE 138
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDL 258
+ +++ FGL + D Y+ + +T PE GR +S ++SFG +L ++
Sbjct: 139 NLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 259 LSGKHIP 265
++ +P
Sbjct: 198 VTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 5e-07
Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 42/287 (14%)
Query: 69 FSSDNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAWPDP-TQFKEEAEGVGK 122
S+ + E GE A +YKG L ++ Q +A+K + P +F++EA + +
Sbjct: 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAE 63
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW-----------EKQTIEWPLR- 170
L + L+G ++ EY+ L + L E T++ L
Sbjct: 64 LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDH 123
Query: 171 ---LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227
L +A IA ++Y ++ ++ DL A +L E ++S GL + Y
Sbjct: 124 GDFLHIAIQIAAGMEYLSSHFF-VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRV 182
Query: 228 N------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRGE 276
+ + PPE + G+ +S I+SFG VL ++ S P ++M+R
Sbjct: 183 QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242
Query: 277 NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
L S + ++ L ++C Q P RP K++ L
Sbjct: 243 QLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDER--LLVAEYMPNDTLAKHLFHWEKQTIEWPLR 170
K+E E + L + + G C L+ E++P+ +L ++L K I +
Sbjct: 53 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQ 111
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--- 227
L+ A I + +DY + + ++ DL A VL + + ++ FGL K K Y T
Sbjct: 112 LKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKD 170
Query: 228 ----NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS---GKHIPPSHALDMI---RGE- 276
+ + PE L + S ++SFG L +LL+ + P + L MI G+
Sbjct: 171 DLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQM 230
Query: 277 NLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+ L+ EGK +V L +C +++P +R + +NL+
Sbjct: 231 TVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 35/257 (13%)
Query: 86 VYKGRL-------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCA 137
VY+G +AVK K A + +F +EA + + L+G C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN-----TEGRPLY 192
+ + ++ E M L +L + PL L + + LD + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFIH 129
Query: 193 HDLNAYRVLFDEDGDPR-----LSCFGLMKNSMDGKSYST------NLAYTPPEYLKNGR 241
DL A L E G + FGL ++ Y + + PE L +G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 242 VIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLEGKFSSEE--ATQV 298
+S ++SFG ++ ++L+ P P+ N +L G+ E ++
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDKI 242
Query: 299 VGLASQCLQYEPRERPS 315
L + C +P ERP+
Sbjct: 243 YQLMTNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 7e-07
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYS- 226
V FY+AE ALD+ ++ G +Y DL +L DE+G +L+ FGL K S+D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 227 -TNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS 284
+ Y PE + N R +S +SFG ++ ++L+G P D R E + +++ +
Sbjct: 159 CGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGSL--PFQGKD--RKETMTMILKA 213
Query: 285 HLE-GKFSSEEA 295
L +F S EA
Sbjct: 214 KLGMPQFLSPEA 225
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 8e-07
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 26/260 (10%)
Query: 77 ESGEKAANVVYKG------RLENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLA 129
E G+ + +VY+G + E +A+K + A + +F EA + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--------LRVAFYIAEAL 181
L+G G L++ E M L +L + P++ +++A IA+ +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
Y N + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
LK+G S ++SFG VL ++ + P M + L +M+ L K
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GMSNEQVLRFVMEGGLLDK-PDNCP 247
Query: 296 TQVVGLASQCLQYEPRERPS 315
+ L C QY P+ RPS
Sbjct: 248 DMLFELMRMCWQYNPKMRPS 267
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 9e-07
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 24/267 (8%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR 127
N S + E G VV+ G+ + +A+K + A + F EEA+ + KL +
Sbjct: 2 NPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPK 60
Query: 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE 187
L L G C +V E+M N L +L + + + L + + E ++Y
Sbjct: 61 LVQLYGVCTQQKPLYIVTEFMENGCLLNYL-RQRQGKLSKDMLLSMCQDVCEGMEYLERN 119
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRV 242
++ DL A L G ++S FG+ + +D + S++ A ++PPE +
Sbjct: 120 SF-IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKY 178
Query: 243 IPESVIYSFGTVLLDLLSGKHIPPS-----HALDMI-RGENLNLLMDSHLEGKFSSEEAT 296
+S ++SFG ++ ++ + +P ++MI RG L L
Sbjct: 179 SSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG---FRLYRPKLASM------- 228
Query: 297 QVVGLASQCLQYEPRERPSTKNLVVTL 323
V + C +P RP+ L+ +
Sbjct: 229 TVYEVMYSCWHEKPEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 14/243 (5%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K K P F +EA+ + KLR +L L Y
Sbjct: 15 GQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVPL--YAVVS 71
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
+E + +V E+M +L L + + ++ P + +A IA+ + Y ++ DL A
Sbjct: 72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY-IHRDLRA 130
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFG 252
+L ++ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 131 ANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L +L++ +P M+ E L + + + L C + +P E
Sbjct: 191 ILLTELVTKGRVPYP---GMVNREVLEQV-ERGYRMPCPQGCPESLHELMKLCWKKDPDE 246
Query: 313 RPS 315
RP+
Sbjct: 247 RPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 97 IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-CAGDERL-LVAEYMP----N 150
+AVKK F+ E E + L+ + G C AG L LV EY+P
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210
D L KH ++ ++ L A I + ++Y ++ R ++ DL +L + + ++
Sbjct: 96 DYLQKH-----RERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149
Query: 211 SCFGLMKNSMDGKSYST-------NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH 263
FGL K K Y + + PE L + S ++SFG VL +L +
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209
Query: 264 I---PPSHALDMIRGENLNLLMDSHL------EGKFSSEEA--TQVVGLASQCLQYEPRE 312
PP+ + M+ + ++ HL G+ + ++ + +C +P +
Sbjct: 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269
Query: 313 RPSTKNLVVTLARLQ 327
RPS L + + ++
Sbjct: 270 RPSFSELALQVEAIR 284
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYR 199
L+ +Y+ L HL+ E T V YIAE ALD+ + G +Y D+
Sbjct: 82 LILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALDHLHQLG-IIYRDIKLEN 135
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVI--YSFG 252
+L D +G L+ FGL K + + + Y PE ++ G + + +S G
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195
Query: 253 TVLLDLLSG 261
+ +LL+G
Sbjct: 196 VLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 5e-06
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 29/267 (10%)
Query: 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANL 131
++ G A VVY L N + +A+K+ T E + V + + N+
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNV 61
Query: 132 IGYCCA---GDERLLVAEYMPNDTLA---KHLFHWEKQTIEWPLRLRVAFYIAEALDYCN 185
+ Y + GDE LV Y+ +L K + + ++ + V + + L+Y +
Sbjct: 62 VKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSY--PRGGLDEAIIATVLKEVLKGLEYLH 119
Query: 186 TEGRPLYHDLNAYRVLFDEDGDPRLSCFG----LMKNSMDGKSYSTNLAYTP----PEYL 237
+ G+ ++ D+ A +L EDG +++ FG L + TP PE +
Sbjct: 120 SNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178
Query: 238 KNGRVIPESV-IYSFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSS 292
+ I+SFG ++L +G PP L + + L K+S
Sbjct: 179 EQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK 238
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNL 319
+ S CLQ +P +RP+ + L
Sbjct: 239 SFRKMI----SLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 6e-06
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHW----EKQTIEWPLRLRVAFYIAEALDYCNT 186
L Y + D LV ++ L H+ + E+ W + VA LD +
Sbjct: 50 LHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVA------LDALHR 103
Query: 187 EGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKNGRVI 243
EG + DLN +L D+ G +L+ F +++S DG++ Y PE G +
Sbjct: 104 EG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEV---GGIS 157
Query: 244 PESVI---YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
E+ +S G +L +LL+GK + H + LN+ ++ SEEA
Sbjct: 158 EETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNI-------PEWVSEEARS--- 207
Query: 301 LASQCLQYEPRER 313
L Q LQ+ P ER
Sbjct: 208 LLQQLLQFNPTER 220
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 6e-06
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL-LV 144
V+ G +A+K K P F EA + +L+ RL L Y E + ++
Sbjct: 22 VWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRL--YAVVTQEPIYII 78
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
EYM N +L L E + + +A IAE + + E + H DL A +L
Sbjct: 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAF--IERKNYIHRDLRAANILVS 136
Query: 204 EDGDPRLSCFGLMK-------NSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLL 256
E +++ FGL + + +G + + +T PE + G +S ++SFG +L
Sbjct: 137 ETLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 194
Query: 257 DLLSGKHIP 265
++++ IP
Sbjct: 195 EIVTYGRIP 203
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 6e-06
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL-LV 144
V+ G +AVK K P F EEA+ + KLR +L L Y +E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQL--YAVVSEEPIYIV 78
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204
EYM +L L E + ++ P + +A +A + Y ++ DL + +L +
Sbjct: 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANILVGD 137
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+++ FGL + D + + + +T PE GR +S ++SFG +L +L+
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 197
Query: 260 SGKHIP 265
+ +P
Sbjct: 198 TKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 9e-06
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 20/152 (13%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
R FY AE L + + +G +Y DL VL D+DG +++ FG+ K +M+G+ ++
Sbjct: 97 RARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155
Query: 229 LAYTP----PEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENL--NLL 281
TP PE LK G+ ESV +SFG +L ++L G+ P H D + L ++L
Sbjct: 156 FCGTPDYIAPEILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGEDE---DELFDSIL 209
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRER 313
D ++ S+EA S+ + +P +R
Sbjct: 210 NDRPHFPRWISKEAK---DCLSKLFERDPTKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 9e-06
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V+ G N +AVK K F EEA + L+ +L L + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
EYM +L L E + P + + IAE + Y + ++ DL A VL E
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 139
Query: 206 GDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+++ FGL + D + + + +T PE + G +S ++SFG +L ++++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVT 199
Query: 261 GKHIP 265
IP
Sbjct: 200 YGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRL--RVAFYIAEALDYCNTEGRPLYHDLNAYRV 200
+V EYM +LA L K+ + P + +A I + LDY +T+ ++ D+ +
Sbjct: 76 IVLEYMDGGSLADLL----KKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNL 131
Query: 201 LFDEDGDPRLSCFG---LMKNSMDGK-SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLL 256
L + G+ +++ FG +++N++D ++ + Y PE ++ + I+S G LL
Sbjct: 132 LINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLL 191
Query: 257 DLLSGKHIPPSHALDMIRGENLNLLMDS---HLEGKFSSEEATQVVGLASQCLQYEPRER 313
+ GK P E + + D L + S E + S CLQ +P++R
Sbjct: 192 ECALGKF-PFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI---SACLQKDPKKR 247
Query: 314 PSTKNL 319
PS L
Sbjct: 248 PSAAEL 253
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 1e-05
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E G+ +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH---LEGK 289
PE +K ++ I+S G ++L G+ PP L ++ L L+ ++ LEG
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGE--PPHSELHPMK--VLFLIPKNNPPTLEGN 224
Query: 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+S + CL EP RP+ K L+
Sbjct: 225 YSKP----LKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
+V EY N L K L + + R I L + +++ + L+ D+ + +
Sbjct: 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFL 134
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGTVLLDL 258
D + ++ G+ K D +++ + TP PE ++ +S +++ G VL +
Sbjct: 135 DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYEC 194
Query: 259 LSGKHIPPSHALDMIRGENLNLLMDSHLEGKF---SSEEATQVVGLASQCLQYEPRERPS 315
+GKH P A N L+ + G F S + Q+ L QCL + R+RP
Sbjct: 195 CTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPD 246
Query: 316 TKNLV 320
T L+
Sbjct: 247 TFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE ALDY ++E +Y DL
Sbjct: 68 DRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGAEIVSALDYLHSEKNVVYRDL 122
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 123 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 179
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D + L L+ + S E + + GL L+
Sbjct: 180 WGLGVVMYEMMCGRL--PFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGL----LKK 233
Query: 309 EPRER 313
+P++R
Sbjct: 234 DPKQR 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 63/278 (22%), Positives = 106/278 (38%), Gaps = 38/278 (13%)
Query: 77 ESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN 130
E GE A V+ N + +AVK + + F+ EAE + L+ + +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 131 LIGYCCAGDERLLVAEYMPNDTL----------AKHLFHWEKQT---IEWPLRLRVAFYI 177
G C G L+V EYM + L AK L E + L +A I
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131
Query: 178 AEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAY 231
A + Y + ++ DL L + ++ FG+ ++ Y + +
Sbjct: 132 ASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 190
Query: 232 TPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
PPE + + ES I+SFG VL ++ + GK P + L ++ +G+
Sbjct: 191 MPPESILYRKFTTESDIWSFGVVLWEIFTYGKQ--PWYQLSNTEA------IECITQGRE 242
Query: 291 SSEEAT---QVVGLASQCLQYEPRERPSTKNLVVTLAR 325
T +V + C Q EP++R K++ L
Sbjct: 243 LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 54/271 (19%), Positives = 102/271 (37%), Gaps = 29/271 (10%)
Query: 79 GEKAANVVYKGRLE----NRQWIAVK--KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
GE V +G+L ++ +AVK K + + +F EA + + LI
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 133 GYCCAGDER------LLVAEYMPNDTLAKHLFH--WEKQTIEWPLRLRVAFY--IAEALD 182
G C +++ +M + L L + + PL+ + F IA ++
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPP------EY 236
Y + ++ DL A + ED ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 237 LKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
L + +S +++FG + ++ + P P + E + L + K +
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPG----VENHEIYDYLRHGN-RLKQPEDCL 241
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
++ L C + +P++RP+ L L +
Sbjct: 242 DELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 30/262 (11%)
Query: 92 ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151
+++ +AVK + F EAE + L+ + + G C GD ++V EYM +
Sbjct: 33 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 92
Query: 152 TLAKHLFHWEKQTI-----------EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRV 200
L K L + L +A IA + Y ++ ++ DL
Sbjct: 93 DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNC 151
Query: 201 LFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTV 254
L E+ ++ FG+ ++ Y + + PPE + + ES ++S G V
Sbjct: 152 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211
Query: 255 LLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT---QVVGLASQCLQYEP 310
L ++ + GK P + L N +++ +G+ T +V L C Q EP
Sbjct: 212 LWEIFTYGKQ--PWYQLSN------NEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREP 263
Query: 311 RERPSTKNLVVTLARLQTKSDV 332
R + K + L L S V
Sbjct: 264 HMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
R FY AE L + +++G +Y DL +L D DG +++ FG+ K +M G + +
Sbjct: 97 RATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155
Query: 229 LAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL--NLLM 282
TP PE L + +SFG +L ++L G+ P H D E L ++ M
Sbjct: 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ--SPFHGHDE---EELFQSIRM 210
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSK 342
D+ ++ + EA ++ + EP ER RL K D+ + R
Sbjct: 211 DNPCYPRWLTREAKDIL---VKLFVREP-ER-----------RLGVKGDIRQHPFFREID 255
Query: 343 HEEAQST----PQRPLSPLAEACSRMD 365
+ P +P A CS D
Sbjct: 256 WSALEEREIEPPFKPKVKSANDCSNFD 282
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 49/257 (19%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR-----KRLA--NLIGY--C 135
VY + + +AVK +EE E L R L N++ Y
Sbjct: 16 VYLALDKDTGELMAVKSV-----ELSGDSEEELE---ALEREIRILSSLQHPNIVRYYGS 67
Query: 136 C---AGDERLLVAEYMPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
+ + EY+ +L+ L +K + P+ + I E L Y ++ G +
Sbjct: 68 ERDEEKNTLNIFLEYVSGGSLSSLL---KKFGKLPEPVIRKYTRQILEGLAYLHSNG--I 122
Query: 192 YH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNL-------AYTPPEYLKNGRVI 243
H D+ +L D DG +L+ FG K + + PE ++
Sbjct: 123 VHRDIKGANILVDSDGVVKLADFGCAK-RLGDIETGEGTGSVRGTPYWMAPEVIRGEEYG 181
Query: 244 PESVIYSFGTVLLDLLSGKHI-----PPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
+ I+S G ++++ +GK P AL I + HL SEEA
Sbjct: 182 RAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHL-----SEEAKDF 236
Query: 299 VGLASQCLQYEPRERPS 315
+ +CL+ +P++RP+
Sbjct: 237 L---RKCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 35/277 (12%)
Query: 68 NFSSDNIVSESG----EKAANVVYKGRLENRQWI--AVKKFTKVAWPDPTQFKEEAEGVG 121
SD+I + E N +YKG N++ I KKF K + E + +
Sbjct: 14 CIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLR 73
Query: 122 KLRRKRLANLIGY---CCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYI 177
++ + + G+ RL L+ EY L + + EK + + +L +A
Sbjct: 74 RIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYL-REVLDKEKD-LSFKTKLDMAIDC 131
Query: 178 AEAL-DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-LAYTPPE 235
+ L + +P Y +L + L E+ ++ C GL K + N + Y +
Sbjct: 132 CKGLYNLYKYTNKP-YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYK 190
Query: 236 YLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHA-----LDMIRGEN--LNLLMDSHL 286
L + + IYS G VL ++ +GK IP + D+I +N L L +D L
Sbjct: 191 MLNDIFSEYTIKDDIYSLGVVLWEIFTGK-IPFENLTTKEIYDLIINKNNSLKLPLDCPL 249
Query: 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
E K + C ++ +RP+ K ++ L
Sbjct: 250 EIKC----------IVEACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 25/252 (9%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHL---------FHWE-----KQTIEWPL 169
+ K + NL+G C ++ EY L ++L + ++ ++ + +
Sbjct: 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135
Query: 170 RLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
+ A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ ++D +T
Sbjct: 136 LVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTT 194
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283
N + + PE L + +S ++SFG +L ++ + + S + E LL +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT---LGGSPYPGIPVEELFKLLKE 251
Query: 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKH 343
H K + ++ + +C P +RP+ K LV L R+ T + + L V
Sbjct: 252 GHRMDK-PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSVPFE 310
Query: 344 EEAQSTPQRPLS 355
+ + P P S
Sbjct: 311 QYSPGCPDSPSS 322
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 86 VYKGRLE--NRQWIAVK-KFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDE 140
V +GRL+ ++ I V K K D + F EA +G+ + L G
Sbjct: 20 VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP 79
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRV 200
+++ EYM N +L K L + + + + IA + Y +E ++ DL A +
Sbjct: 80 VMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYL-SEMNYVHRDLAARNI 137
Query: 201 LFDEDGDPRLSCFGLMKNSMDGKS-YSTN-----LAYTPPEYLKNGRVIPESVIYSFGTV 254
L + + ++S FGL + D ++ Y+T + +T PE + + S ++SFG V
Sbjct: 138 LVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV 197
Query: 255 LLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVVGLASQCLQYEPRER 313
+ +++S P DM + + + D + L A + L C Q + ER
Sbjct: 198 MWEVMSYGERP---YWDMSNQDVIKAVEDGYRLPPPMDCPSA--LYQLMLDCWQKDRNER 252
Query: 314 PSTKNLVVTLARL 326
P+ +V TL ++
Sbjct: 253 PTFSQIVSTLDKM 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 137 AGDERLLVAEYMPN---DTLAKHL----FHWEKQTIEWPLRLRVAFYIAE---ALDYCNT 186
+ D LV EY+ +L K L W KQ YIAE ++ +
Sbjct: 68 SKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQ------------YIAEVVLGVEDLHQ 115
Query: 187 EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPES 246
G ++ D+ +L D+ G +L+ FGL +N ++ K + Y PE + S
Sbjct: 116 RG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMS 174
Query: 247 VIYSFGTVLLDLLSGKHIPPSHA 269
+S G V+ + L G PP HA
Sbjct: 175 DWWSLGCVIFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ A +L +E+G +L+ FG+ D + + TP PE ++ ++ I+
Sbjct: 124 DIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIW 183
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
S G +++ GK I P A+ MI + L D K+S E +C
Sbjct: 184 SLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPE---KWSPE----FNDFVKKC 236
Query: 306 LQYEPRERPSTKNL 319
L +P ERPS L
Sbjct: 237 LVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 64/284 (22%), Positives = 106/284 (37%), Gaps = 42/284 (14%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFT-KVAWPDPTQFKEEAEGV 120
N S+ + E GE VYKG L E Q +A+K K P +FK EA
Sbjct: 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMR 62
Query: 121 GKLRRKRLANLIG-------------YCCAGD-ERLLVAEYMPNDTLAKHLFHWEKQTIE 166
+L+ + L+G YC D LV +D + K T+E
Sbjct: 63 SRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122
Query: 167 WPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS 226
+ + IA +++ ++ ++ DL VL + + ++S GL + Y
Sbjct: 123 PADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK 181
Query: 227 T------NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRG 275
+ + PE + G+ +S I+S+G VL ++ S P ++MIR
Sbjct: 182 LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241
Query: 276 ENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ D + V L +C P RP K++
Sbjct: 242 RQVLPCPD---------DCPAWVYTLMLECWNEFPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 176 YIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNLAYT 232
+ L+Y + EG+ ++ D+ A +L E+GD +L+ FG+ + ++M ++ T
Sbjct: 106 EVLLGLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN---TFVGT 161
Query: 233 P----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--- 285
P PE +K ++ I+S G ++L G+ PP L +R L L+ ++
Sbjct: 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE--PPLSDLHPMRV--LFLIPKNNPPS 217
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
LEG S+ V S CL +P+ERPS K L
Sbjct: 218 LEGNKFSKPFKDFV---SLCLNKDPKERPSAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 6e-05
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 53/204 (25%)
Query: 134 YCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY-IAEALDYCNTEGRPLY 192
Y GD +++ + F E+Q ++W F + AL Y ++ + L+
Sbjct: 80 YADGGD----LSQKIKKQKKEGKPFP-EEQILDW-------FVQLCLALKYLHSR-KILH 126
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY------TP----PEYLKNGRV 242
D+ + +G +L FG+ K S+ + TP PE +N
Sbjct: 127 RDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVVGTPYYLSPELCQN--- 177
Query: 243 IP---ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS------SE 293
P +S I+S G VL +L + KH P GENL L L+G++ S
Sbjct: 178 KPYNYKSDIWSLGCVLYELCTLKH--P------FEGENLLELALKILKGQYPPIPSQYSS 229
Query: 294 EATQVVGLASQCLQYEPRERPSTK 317
E +V S LQ +P ERPS
Sbjct: 230 ELRNLV---SSLLQKDPEERPSIA 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYR 199
L+ EY+ L HL E++ I + FY++E AL++ + +G +Y DL
Sbjct: 77 LILEYLSGGELFMHL---EREGIF--MEDTACFYLSEISLALEHLHQQG-IIYRDLKPEN 130
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKS----YSTNLAYTPPEYLK---NGRVIPESVIYSFG 252
+L D G +L+ FGL K S+ + + + Y PE L +G+ + +S G
Sbjct: 131 ILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVD---WWSLG 187
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
++ D+L+G PP EN +D L+GK +
Sbjct: 188 ALMYDMLTGA--PP------FTAENRKKTIDKILKGKLN 218
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 7e-05
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP--- 233
I + LDY ++E + ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 234 -PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292
PE ++ ++ I+S G ++L G+ PP+ + +R + L+ + +
Sbjct: 169 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLTG 223
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLV 320
E + CL +P RP+ K L+
Sbjct: 224 EFSKPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRL-RVA-------- 174
+ K + NL+G C ++ EY L ++L +E+ + RV
Sbjct: 79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD 138
Query: 175 -----FYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYST 227
+ +A ++Y ++ + ++ DL A VL E+ +++ FGL + N++D +T
Sbjct: 139 LVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG ++ ++ L G P ++ + LL
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-----LL 252
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
+ H K + ++ + C P RP+ K LV L R+ T
Sbjct: 253 KEGHRMDK-PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 20/181 (11%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG----RPLYHDLNAY 198
LV M L H+++ + R FY A+ + C E R +Y DL
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFPEA---RAIFYAAQII--CGLEHLHQRRIVYRDLKPE 124
Query: 199 RVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVL 255
VL D+ G+ R+S GL +K K + Y PE L+ ++ G L
Sbjct: 125 NVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTL 184
Query: 256 LDLLSGKHIPPSHALDMIRGENLN---LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
++++G P + + E L L M KFS E L LQ +P +
Sbjct: 185 YEMIAG-RSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKD----LCEALLQKDPEK 239
Query: 313 R 313
R
Sbjct: 240 R 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 59/276 (21%), Positives = 100/276 (36%), Gaps = 39/276 (14%)
Query: 79 GEKAANVVYKGRLENR------QWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANL 131
G A VY+G R +AVK + D + F EA + K + + L
Sbjct: 15 GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRL 74
Query: 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD-----YCNT 186
IG R ++ E M L L + E P L + + A D
Sbjct: 75 IGVSFERLPRFILLELMAGGDLKSFLRE-NRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133
Query: 187 EGRPLYHDLNAYRVLFDEDGDPR---LSCFGLMKNSMDGKSYSTN------LAYTPPEYL 237
E ++ D+ A L G R ++ FG+ ++ Y + + PPE
Sbjct: 134 ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAF 193
Query: 238 KNGRVIPESVIYSFGTVLLDLLSGKHIP-PS----HALDMIRGENLNLLMDSHLEGKFSS 292
+G ++ ++SFG +L ++ S ++P P ++ + G +D
Sbjct: 194 LDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG---RLDP------PK 244
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328
V + + C Q+ P +RP N L R+Q
Sbjct: 245 GCPGPVYRIMTDCWQHTPEDRP---NFATILERIQY 277
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY+ L FH ++ + R R FY AE ALDY ++ G+ +Y DL
Sbjct: 68 DRLCFVMEYVNGGEL---FFHLSRERVFSEDRTR--FYGAEIVSALDYLHS-GKIVYRDL 121
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + K++ Y PE L++ GR +
Sbjct: 122 KLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 178
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
+ G V+ +++ G+ P + D + L L+ D S++ + + GL
Sbjct: 179 WGLGVVMYEMMCGRL--PFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGL 229
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 134 YCC--AGDERLLVAEYMPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAE---ALDYCNTE 187
YCC D V E++ L +FH +K + + R FY AE AL + + +
Sbjct: 62 YCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEA---RARFYAAEITSALMFLHDK 115
Query: 188 GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM-DGKSYSTNLA---YTPPEYLKNGRVI 243
G +Y DL VL D +G +L+ FG+ K + +GK+ ST Y PE L+
Sbjct: 116 G-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYG 174
Query: 244 PESVIYSFGTVLLDLLSGKHIP 265
P ++ G +L ++L G H P
Sbjct: 175 PSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 21/243 (8%)
Query: 97 IAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153
+ VK K D F+ E + KL K + L+G C + ++ EY L
Sbjct: 38 VLVKALQKT--KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDL 95
Query: 154 AKHLF-------HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG 206
+ L + + ++ + IA +D+ + R ++ DL A L
Sbjct: 96 KQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSSQR 154
Query: 207 DPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG 261
+ ++S L K+ + + Y L + PE ++ +S ++SFG ++ ++ +
Sbjct: 155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ 214
Query: 262 KHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVV 321
+P + E LN L LE +++ L ++C P++RPS LV
Sbjct: 215 GELPFY---GLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271
Query: 322 TLA 324
L
Sbjct: 272 ALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEW-------PLRL----- 171
+ K + NL+G C ++ EY L ++L +E+ P
Sbjct: 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141
Query: 172 --RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN--SMDGKSYST 227
A+ +A ++Y ++ + ++ DL A VL ED +++ FGL ++ +D +T
Sbjct: 142 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIPPSHALDMIRGENLNLL 281
N + + PE L + +S ++SFG +L ++ L G P ++ + LL
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LL 255
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ H K S ++ + C P +RP+ K LV L R+
Sbjct: 256 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
R FY AE L + +++G +Y DL V+ D DG +++ FG+ K ++ G + ++
Sbjct: 97 RATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155
Query: 229 LAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD 271
TP PE L+ + +SFG +L ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 52/204 (25%), Positives = 78/204 (38%), Gaps = 34/204 (16%)
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGR 189
Y G + L LV EY+P LA L + + YIAE AL+Y ++ G
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDV-----ARIYIAEIVLALEYLHSNG- 113
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGL----MKNSMDGKSYSTNLA--------YTPPEYL 237
++ DL +L D +G +L+ FGL + + Y PE +
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173
Query: 238 KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF---SSEE 294
+S G +L + L G IPP H GE + + L GK E
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLVG--IPPFH------GETPEEIFQNILNGKIEWPEDVE 225
Query: 295 ATQV-VGLASQCLQYEPRERPSTK 317
+ + L S+ L +P +R K
Sbjct: 226 VSDEAIDLISKLLVPDPEKRLGAK 249
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 59/257 (22%), Positives = 100/257 (38%), Gaps = 43/257 (16%)
Query: 124 RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIE--------------WPL 169
+ K + NL+G C ++ EY L + L + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 170 RLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY--ST 227
+ A+ +A ++Y + R ++ DL A VL ED +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 228 N----LAYTPPEYLKNGRVIPESVIYSFGTVLLDL--LSGKHIP--PSHALDMIRGENLN 279
N + + PE L + +S ++SFG ++ ++ L G P P L
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL-------FK 247
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLR 339
LL + H K S ++ L +C P +RP+ K LV L + V+
Sbjct: 248 LLREGHRMDK-PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK----------VLAA 296
Query: 340 VSKHEEAQSTPQRPLSP 356
VS+ S P SP
Sbjct: 297 VSEEYLDLSMPFEQYSP 313
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 172 RVAFY---IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
R FY IA AL Y + +Y DL +L D G L+ FGL K ++ ++
Sbjct: 97 RARFYAAEIASALGYLH-SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155
Query: 229 LAYTPPEYLKNGRVIPESVI----------YSFGTVLLDLLSGKHIPPSHALD 271
T PEYL PE + + G VL ++L G +PP ++ D
Sbjct: 156 FCGT-PEYLA-----PEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLR 172
F EA +G+ + L G G+ ++V EYM N L L E Q + L +
Sbjct: 53 FLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQL-MG 111
Query: 173 VAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--------NSMDGKS 224
+ +A + Y + G ++ L A++VL + D ++S F ++ +M GKS
Sbjct: 112 MLPGLASGMKYLSEMGY-VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKS 170
Query: 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
+ + PE ++ S ++SFG V+ +++S
Sbjct: 171 P---VLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 42/188 (22%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN 228
+++ + L Y + + ++ D+ +L + G+ +L FG+ + +SM S+
Sbjct: 103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGT 161
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH-IPP--------------------- 266
+Y PE L+ +S I+S G L+++ G++ IPP
Sbjct: 162 RSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKE 221
Query: 267 ------SHALD----MIRGENLNLLMDSH---LEGKFSSEEATQVVGLASQCLQYEPRER 313
H D M E L+ +++ L S+E +CL+ P+ER
Sbjct: 222 SHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDE---FQDFVDKCLKKNPKER 278
Query: 314 PSTKNLVV 321
K L
Sbjct: 279 ADLKELTK 286
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
R FY AE AL + + G +Y DL +L D +G +L+ FG+ K + +T
Sbjct: 97 RSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155
Query: 229 LAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHA 269
TP PE L+ P ++ G ++ ++++G+ PP A
Sbjct: 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ--PPFEA 198
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 109 DPTQ------FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM---PNDTLAKHLFH 159
DP+ F E A + ++ LA + G C G E ++V E++ P D +
Sbjct: 53 DPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK--- 109
Query: 160 WEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDG-----DP--RLS 211
EK + ++ VA +A AL Y E + L H ++ A +L G P +LS
Sbjct: 110 -EKGRVPVAWKITVAQQLASALSY--LEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLS 166
Query: 212 CFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIP----- 265
G+ ++ + + + PE + G + + +SFGT LL++ +P
Sbjct: 167 DPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226
Query: 266 PSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
PS E H + ++ L SQCL YEP +RPS + ++ L
Sbjct: 227 PS--------EKERFYEKKH---RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 16/183 (8%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
EY TL + + Q E + L F I A+ Y + G L+ D+ + +
Sbjct: 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKA 137
Query: 206 GDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSG 261
G +L FG+ K S + + TP PE + + +S I++ G VL +LL+
Sbjct: 138 GLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTL 197
Query: 262 KHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE---ATQVVGLASQCLQYEPRERPSTKN 318
K N L+ ++G ++ +++++ L LQ +P +RP+
Sbjct: 198 KRT--------FDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADE 249
Query: 319 LVV 321
++
Sbjct: 250 VLD 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 75 VSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGV-----------GK 122
V + GE VVYK R + +A+KK + E EGV +
Sbjct: 5 VEKIGEGTYGVVYKARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKE 55
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD 182
L + L+ ++ LV E++ D L K + I PL F + + L
Sbjct: 56 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASPLSGIPLPLIKSYLFQLLQGLA 114
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN-SMDGKSYS---TNLAYTPPEYLK 238
+C++ R L+ DL +L + +G +L+ FGL + + ++Y+ L Y PE L
Sbjct: 115 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 173
Query: 239 NGRVIPESV-IYSFGTVLLDLLSGKHIPP 266
+ +V I+S G + ++++ + + P
Sbjct: 174 GCKYYSTAVDIWSLGCIFAEMVTRRALFP 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 5e-04
Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 43/275 (15%)
Query: 77 ESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN 130
E GE A V+ N + +AVK F+ EAE + L+ + +
Sbjct: 12 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHL-FHWEKQTI---EWPLR----------LRVAFY 176
G C GD ++V EYM + L K L H I P + L +A
Sbjct: 72 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LA 230
IA + Y ++ ++ DL L + ++ FG+ ++ Y +
Sbjct: 132 IASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 190
Query: 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GK----HIPPSHALDMI-RGENLNLLMDS 284
+ PPE + + ES ++SFG +L ++ + GK + + ++ I +G L
Sbjct: 191 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLE----- 245
Query: 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ +E V + C Q EP++R + K +
Sbjct: 246 --RPRVCPKE---VYDIMLGCWQREPQQRLNIKEI 275
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 166 EWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGL---MKNSMD 221
E L ++A + + L Y ++ R + H D+ +L G +L FG+ + NS+
Sbjct: 104 EKVL-GKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160
Query: 222 GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK---------HIPPSHALDM 272
G T+ Y PE ++ S ++S G LL++ + + P L
Sbjct: 161 GTFTGTSF-YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY 219
Query: 273 IRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
I L D G SEE + QCL+ +P RP+ +++
Sbjct: 220 IVNMPNPELKDEPGNGIKWSEEFKDFIK---QCLEKDPTRRPTPWDML 264
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 46/272 (16%)
Query: 73 NIVSESGEKAANVVY--KGRLENRQWIAVKK--FTKVAWPDPTQFKEEAEG-VGKLRRKR 127
I+ + GE + +Y K + ++ + +K+ TK+ P + KE ++ V L + +
Sbjct: 3 EIIKKIGEGSFGKIYLAKAKSDSEHCV-IKEIDLTKM----PVKEKEASKKEVILLAKMK 57
Query: 128 LANLIGYCCAGDER---LLVAEYMPNDTLAKH-------LFHWEKQTIEWPLRLRVAFYI 177
N++ + + E +V EY L K LF E Q + W ++
Sbjct: 58 HPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFS-EDQILSW--------FV 108
Query: 178 AEALDYCNTEGRPLYH-DLNAYRVLFDEDGD-PRLSCFGLMKNSMDGKSYSTNLAYTP-- 233
+L + R + H D+ + + ++G +L FG+ + D + TP
Sbjct: 109 QISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYY 168
Query: 234 --PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF- 290
PE +N ++ I+S G VL +L + KH P G NL+ L+ +G F
Sbjct: 169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKH--P------FEGNNLHQLVLKICQGYFA 220
Query: 291 --SSEEATQVVGLASQCLQYEPRERPSTKNLV 320
S + + L SQ + PR+RPS +++
Sbjct: 221 PISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 8e-04
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYR 199
LV M L H+++ +++ +P R FY A+ L++ + + R +Y DL
Sbjct: 70 LVMTIMNGGDLRYHIYNVDEENPGFP-EPRACFYTAQIISGLEHLH-QRRIIYRDLKPEN 127
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY-SFGTV 254
VL D DG+ R+S GL DG+S + A TP PE L+ G SV Y + G
Sbjct: 128 VLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQ-GEEYDFSVDYFALGVT 186
Query: 255 LLDLLSGK 262
L ++++ +
Sbjct: 187 LYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 9e-04
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFS-DRSDAALL 455
+ + G+ F+ D+ AI+ Y + + ++ + Y +L +L + AL
Sbjct: 1 DNAEALKNLGNALFKLGDYDEAIEAYEKALELD-PDNAEAYYNLALAYLKLGKDYEEALE 59
Query: 456 DAMQAQCAHP 465
D +A P
Sbjct: 60 DLEKALELDP 69
|
Length = 69 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.001
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD--GKSYSTNL 229
+V+ + + L Y + + ++ D+ +L + G+ +L FG+ +D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH-IPPSHALDMIRGENLNLLMDSHLEG 288
+Y PE L+ +S I+S G L+++ G++ IPP A + L L+ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 289 KFSSEEATQVVGLASQCLQYEPRERP 314
+ E + PR RP
Sbjct: 221 DPAESETS-------------PRPRP 233
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D LV M L H+++ E R FY AE L+ + E +Y DL
Sbjct: 73 DALCLVLTIMNGGDLKFHIYNMGNPGFE---EERALFYAAEILCGLEDLHREN-TVYRDL 128
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS---TNLAYTPPEYLKNGRVIPESVIYSFG 252
+L D+ G R+S GL +G+S + Y PE L N R + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLG 188
Query: 253 TVLLDLLSGK 262
++ +++ G+
Sbjct: 189 CLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 12/181 (6%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D LV M L H+++ + R FY AE L+ + E R +Y DL
Sbjct: 73 DALCLVLTLMNGGDLKFHIYNMGNPGFD---EERAVFYAAEITCGLEDLHRE-RIVYRDL 128
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFG 252
+L D+ G R+S GL +G + + Y PE +KN R + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLG 188
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
++ +++ GK P + ++ E + + E ++S + + + Q L +P
Sbjct: 189 CLIYEMIEGKS-PFRQRKEKVKREEVERRVKEDQE-EYSEKFSEAARSICRQLLTKDPGF 246
Query: 313 R 313
R
Sbjct: 247 R 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 88 KGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147
K R E+R+ +AV + + P+ Q++E E G L ++ YC GD +
Sbjct: 41 KEREESRKEVAV--LSNMKHPNIVQYQESFEENGNLYI-----VMDYCEGGDLYKKINA- 92
Query: 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207
+ + E Q ++W ++ I AL + + + + L+ D+ + + +DG
Sbjct: 93 ------QRGVLFPEDQILDWFVQ------ICLALKHVH-DRKILHRDIKSQNIFLTKDGT 139
Query: 208 PRLSCFGLMK---NSMD------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDL 258
+L FG+ + ++++ G Y Y PE +N +S I++ G VL ++
Sbjct: 140 IKLGDFGIARVLNSTVELARTCIGTPY-----YLSPEICENRPYNNKSDIWALGCVLYEM 194
Query: 259 LSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
+ K HA + +NL L + SS + + L SQ + PR+RPS +
Sbjct: 195 CTLK-----HAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNS 249
Query: 319 LV 320
++
Sbjct: 250 IL 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210
D K ++ + TI + ++A I +AL+Y +++ ++ D+ VL + +G +L
Sbjct: 87 DKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKL 145
Query: 211 SCFGLMKNSMDGKSYSTNLA---YTPPEYLKNGRVIPE---------SVIYSFGTVLLDL 258
FG+ +D + + + Y PE R+ PE S ++S G +++L
Sbjct: 146 CDFGISGYLVDSVAKTIDAGCKPYMAPE-----RINPELNQKGYDVKSDVWSLGITMIEL 200
Query: 259 LSGKH------IPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+G+ P ++ + L + KFS E ++CL+ +E
Sbjct: 201 ATGRFPYDSWKTPFQQLKQVVEEPSPQLPAE-----KFSPE----FQDFVNKCLKKNYKE 251
Query: 313 RPSTKNLV----VTLARLQTKSDVPSNV 336
RP+ L+ L +DV S V
Sbjct: 252 RPNYPELLQHPFFELHL-SKNTDVASFV 278
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 40/269 (14%)
Query: 79 GEKAANVVYKGRLENRQWI---AVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLI 132
GE V +G+L I AVK K+A ++ F EA + + + LI
Sbjct: 8 GEGEFGSVMEGQLNQDDSILKVAVKTM-KIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 133 GYCCAGDER------LLVAEYMPNDTLAKHLFHWE--KQTIEWPLRLRVAFY--IAEALD 182
G C E +++ +M + L L + P ++ V F IA ++
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPP------EY 236
Y +++ ++ DL A + +E+ + ++ FGL K +G Y P E
Sbjct: 127 YLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIES 185
Query: 237 LKNGRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIR-GENLNLLMDSHLEGKF 290
L + +S ++SFG + ++ + P S D +R G L D L+G +
Sbjct: 186 LADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDC-LDGLY 244
Query: 291 SSEEATQVVGLASQCLQYEPRERPSTKNL 319
S L S C P++RPS + L
Sbjct: 245 S---------LMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 138 GDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V E++ L + H E+Q V + AL Y + +G ++ D
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQG-VIHRD 143
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +LS FG +L TP PE + E I+S
Sbjct: 144 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWS 203
Query: 251 FGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306
G ++++++ G+ + PP A+ IR + DSH K SS + G L
Sbjct: 204 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSH---KVSS----VLRGFLDLML 256
Query: 307 QYEPRERPSTKNLV 320
EP +R + + L+
Sbjct: 257 VREPSQRATAQELL 270
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 173 VAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST-- 227
+ FY AE L++ + +Y DL +L DE G R+S GL + K +++
Sbjct: 99 MRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157
Query: 228 NLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIP--PSHALDMIRGENLNLLMDS 284
Y PE L+ G S +S G +L LL G H P D + + L M
Sbjct: 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAV 216
Query: 285 HLEGKFSSEEATQVVGLASQ 304
L FS E + + GL +
Sbjct: 217 ELPDSFSPELRSLLEGLLQR 236
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 138 GDERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
GDE +V E++ L + H E+Q V + +AL + +G ++ D
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLKALSVLHAQG-VIHRD 141
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYS 250
+ + +L DG +LS FG +L TP PE + PE I+S
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 251 FGTVLLDLLSGK----HIPPSHALDMIR 274
G ++++++ G+ + PP A+ MIR
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 172 RVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN 228
R+A + + L Y + + L+ D+ +L + G +L FG+ + NS+ K+Y
Sbjct: 99 RIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-AKTYVGT 156
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK-----------HIPPSHALDMIRGEN 277
AY PE + + S ++S G ++L G+ + P L I E+
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216
Query: 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320
+L KF V +QC++ +P+ERP+ +NL+
Sbjct: 217 PPVLPVGQFSEKF--------VHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLF-HWEKQTIEWPLRL 171
F E A + ++ K + L G C E ++V E++ L LF H + + P +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL--DLFMHRKSDVLTTPWKF 108
Query: 172 RVAFYIAEALDYCNTEGRPLYH------DLNAYRVLFDEDGDP--RLSCFGLMKNSMDGK 223
+VA +A AL Y E + L H ++ R D + P +LS G+ + +
Sbjct: 109 KVAKQLASALSY--LEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ 166
Query: 224 SYSTNLAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM 282
+ + PE +++ + + + +SFGT L ++ IP D E
Sbjct: 167 ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLK---DKTLAEK----- 218
Query: 283 DSHLEGKF--SSEEATQVVGLASQCLQYEPRERP 314
+ EG+ + ++ L + C+ Y+P +RP
Sbjct: 219 ERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRP 252
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
D V EY L FH ++ + R R FY AE AL+Y ++ +Y D+
Sbjct: 68 DRLCFVMEYANGGEL---FFHLSRERVFTEERAR--FYGAEIVSALEYLHSRD-VVYRDI 121
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSM-DG---KSYSTNLAYTPPEYLKN---GRVIPESVI 248
++ D+DG +++ FGL K + DG K++ Y PE L++ GR +
Sbjct: 122 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD---W 178
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+ G V+ +++ G+ P + D R L L+ + S E + + GL L+
Sbjct: 179 WGLGVVMYEMMCGRL--PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL----LKK 232
Query: 309 EPRER 313
+P++R
Sbjct: 233 DPKQR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 24/256 (9%)
Query: 86 VYKG--RLENRQWIAVK-KFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGDE 140
V++G ++ R+ +AV K K + + + F EA +G+ + L G
Sbjct: 21 VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPL--RLRVAFYIAEALDYCNTEGRPLYHDLNAY 198
+++ EYM N L K+L + + + L LR IA + Y ++ ++ DL A
Sbjct: 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKYL-SDMNYVHRDLAAR 136
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGK--SYSTN-----LAYTPPEYLKNGRVIPESVIYSF 251
+L + + + ++S FGL + D +Y+T+ + +T PE + + S ++SF
Sbjct: 137 NILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSF 196
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVVGLASQCLQYEP 310
G V+ +++S P DM E + + D L A V L QC Q +
Sbjct: 197 GIVMWEVMSFGERP---YWDMSNHEVMKAINDGFRLPAPMDCPSA--VYQLMLQCWQQDR 251
Query: 311 RERPSTKNLVVTLARL 326
RP ++V L +L
Sbjct: 252 ARRPRFVDIVNLLDKL 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.004
Identities = 51/225 (22%), Positives = 78/225 (34%), Gaps = 70/225 (31%)
Query: 143 LVAEYMPND------------TLA--KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG 188
+V EYM +D T + K KQ + E L Y ++ G
Sbjct: 77 MVFEYMDHDLTGLLDSPEVKFTESQIKCYM---KQ-------------LLEGLQYLHSNG 120
Query: 189 RPLYHDLNAYRVLFDEDGDPRLSCFGLMK--NSMDGKSYSTN----LAYTPPEYL----K 238
L+ D+ +L + DG +L+ FGL + + Y TN L Y PPE L +
Sbjct: 121 -ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELLLGATR 178
Query: 239 NGRVIPESVIYSFGTVLLDLLSGKHIPP----SHALDMI----------RGENLNLL--- 281
G PE ++S G +L +L GK I L+ I ++ L
Sbjct: 179 YG---PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235
Query: 282 --------MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
L F + L + L +P++R S
Sbjct: 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQ 280
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGRVIPESV- 247
+Y DL +L DE G R+S GL + K +++ Y PE L+ G S
Sbjct: 119 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSAD 178
Query: 248 IYSFGTVLLDLLSGKHIPPSHAL-DMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301
+S G +L LL G H D + + L ++ L FS E + + GL
Sbjct: 179 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGL 233
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 157 LFHWEKQ-TIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212
FH +++ + P R FY AE AL Y ++ +Y DL +L D G L+
Sbjct: 84 FFHLQRERSFPEP---RARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTD 139
Query: 213 FGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSH 268
FGL K + +T TP PE ++ + G VL ++L G +PP +
Sbjct: 140 FGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG--LPPFY 197
Query: 269 ALD 271
D
Sbjct: 198 CRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEY 236
AL Y + E R ++ DL ++ ED ++ FGL K S + Y+ PE
Sbjct: 125 ALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEI 184
Query: 237 LKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR--GENLNLLMDSHLEGKFSSEE 294
+KN ++ +++FG +L + + + PP ++ +M+ + + + + EG +S
Sbjct: 185 VKNEPYGEKADVWAFGCILYQMCTLQ--PPFYSTNMLSLATKIVEAVYEPLPEGMYS--- 239
Query: 295 ATQVVGLASQCLQYEPRERP 314
V + + CL + RP
Sbjct: 240 -EDVTDVITSCLTPDAEARP 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 135 CCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRP 190
C RL LV EY+ L +FH ++Q + P FY AE AL++ + G
Sbjct: 64 CFQTTSRLFLVIEYVNGGDL---MFHMQRQR-KLPEE-HARFYAAEICIALNFLHERG-I 117
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPES 246
+Y DL VL D DG +L+ +G+ K + ++ TP PE L+
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 247 VIYSFGTVLLDLLSGK 262
++ G ++ ++++G+
Sbjct: 178 DWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 508 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.98 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.96 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.9 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.87 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.86 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.85 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.82 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.81 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.8 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.8 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.78 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.77 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.76 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.71 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.71 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.7 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.69 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.69 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.67 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.66 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.66 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.6 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.59 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.58 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.58 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.57 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.57 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.52 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.52 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.5 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.5 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.48 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.47 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.47 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.46 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.46 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.45 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.45 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.44 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.44 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.44 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.42 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.42 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.39 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.38 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.35 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.35 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.33 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.32 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.31 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.3 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.29 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.28 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.28 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.28 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.28 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.27 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.26 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.26 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.25 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.25 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.25 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.2 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.2 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.19 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.19 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.18 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.18 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.18 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.17 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.15 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.15 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.13 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.13 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.11 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.1 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.1 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.09 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.08 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.06 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.06 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.06 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-52 Score=408.64 Aligned_cols=273 Identities=34% Similarity=0.612 Sum_probs=235.2
Q ss_pred CccccCHHHHHHHhcCCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCccee
Q 010529 53 LFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132 (508)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 132 (508)
....|++.++..+|++|+..+++ |+|+||.||+|.+.++..||||++.........+|..|+.++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 67789999999999999988776 999999999999999999999988765543145699999999999999999999
Q ss_pred eeeeeCC-cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC--CceeecCCCcceeeCCCCCeE
Q 010529 133 GYCCAGD-ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG--RPLYHDLNAYRVLFDEDGDPR 209 (508)
Q Consensus 133 ~~~~~~~-~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--~iiH~Dikp~Nill~~~~~~k 209 (508)
|||.+.+ ..+||+|||++|||.++|+......++|..+++|+.++|+||+|||+.. +||||||||+|||||.++.+|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 5999999999999999997633328999999999999999999999975 599999999999999999999
Q ss_pred EcccCCccccCC-CCcc----ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCch-------h----hhhh
Q 010529 210 LSCFGLMKNSMD-GKSY----STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSH-------A----LDMI 273 (508)
Q Consensus 210 l~Dfg~a~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~-------~----~~~~ 273 (508)
|+|||+|+.... .... .||.+|+|||++..+..+.++|||||||+|+||+||+.+.... . ...+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999976654 3322 7899999999999899999999999999999999999654421 1 1233
Q ss_pred hccchhhhhccccC-CCCCH-HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 274 RGENLNLLMDSHLE-GKFSS-EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 274 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
....+..++|+.+. +..+. .....+..++.+|++.+|.+||+|.+|++.|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 34467788888876 55554 577789999999999999999999999999976654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-53 Score=390.65 Aligned_cols=251 Identities=21% Similarity=0.260 Sum_probs=213.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCc-ceeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE-RLLVA 145 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~-~~lv~ 145 (508)
.++.+.++.||+|..|+||++++ .+++.+|+|++..... ...+++.+|+++++..+||+||.++|.|...+. .+|+|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 34556788999999999999995 5688999999954432 236789999999999999999999999999985 99999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||+||||++++.. .+.+++....+|+.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++....+
T Consensus 158 EYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a 234 (364)
T KOG0581|consen 158 EYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIA 234 (364)
T ss_pred hhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhc
Confidence 99999999999973 4779999999999999999999996 66 999999999999999999999999999877665
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC---CCCCHH-HHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSE-EATQV 298 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~l 298 (508)
.+++||..|||||.+.+..|+.++||||||++++|+.+|+-|++... .....+..++..+.. +..|.. +++++
T Consensus 235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~---~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef 311 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN---PPYLDIFELLCAIVDEPPPRLPEGEFSPEF 311 (364)
T ss_pred ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC---CCCCCHHHHHHHHhcCCCCCCCcccCCHHH
Confidence 67899999999999999999999999999999999999998766531 011122233333322 334554 78999
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+|+..||++||.+|||+.++++|-.-
T Consensus 312 ~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 312 RSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred HHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 999999999999999999999999443
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=399.45 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=219.2
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCC-cceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGD-ERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-~~~lv~E~ 147 (508)
+..+...+|.|+||+||+|.+.+...||||++....... .+.|.+|+.+|.+++|||||+++|+|.... .++|||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 334455689999999999999877779999998654433 458999999999999999999999998887 78999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMD----G 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~----~ 222 (508)
+++|+|.+++.......+++..+++|+.||++||.|||+.++||||||||+|||++.++ ++||+|||+++.... .
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 99999999997544678999999999999999999999998679999999999999997 999999999976553 2
Q ss_pred CccccCCCCCCccccc--cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLK--NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
+...||+.|||||++. ...|+.|+|||||||++|||+||+.||..... ......++....++.++..+++.+..
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v~~~~~Rp~~p~~~~~~l~~ 277 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVASAVVVGGLRPPIPKECPPHLSS 277 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCCCCCCCccCCHHHHH
Confidence 3368999999999999 56899999999999999999999988654321 22233344455566667778899999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
|+.+||..||..||++.+++..|+.+.....
T Consensus 278 l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 278 LMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999876443
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=363.48 Aligned_cols=250 Identities=19% Similarity=0.260 Sum_probs=209.6
Q ss_pred CCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeee-eeeCCc-ce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGY-CCAGDE-RL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~-~~~~~~-~~ 142 (508)
..++|+++++||+|+||+||++. +.+|..||.|.+.-.... ....+..|+.+|++|+|||||+++++ +.++.. ++
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 34567899999999999999999 788999999999743322 24579999999999999999999994 444444 89
Q ss_pred eeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHh---CCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 143 LVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNT---EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~---~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
||||||.+|+|.+.+++. .+..+++..+|+++.|++.||.++|+ ++.|+||||||.||+++.+|.+||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 999999999999999754 45679999999999999999999998 3458999999999999999999999999999
Q ss_pred ccCCC----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC---CC
Q 010529 218 NSMDG----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG---KF 290 (508)
Q Consensus 218 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 290 (508)
.+... .+.+|||+||+||.+.+.+|+.+|||||+||++|||+.-++||.++. ...+-..+..+ ++
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSLCKKIEQGDYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHHHHHHHHcCCCCCC
Confidence 88766 45789999999999999999999999999999999999998876542 22222222222 23
Q ss_pred C-HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 291 S-SEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 291 ~-~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
| .-.+.++..|+..|+..||+.||+...++..+..
T Consensus 249 p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 4 5578999999999999999999997666666544
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-50 Score=372.68 Aligned_cols=251 Identities=20% Similarity=0.237 Sum_probs=207.4
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC-------hhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD-------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
++.|.+.+.||+|+||.|-+|. .++|+.||||++++..... .....+|+++|++|+|||||++++++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3456778899999999999999 6779999999997643222 2346799999999999999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC---CCeEEcccCCcc
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED---GDPRLSCFGLMK 217 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~Dfg~a~ 217 (508)
.||||||+.||.|.+++. .++.+.+..-.-++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999997 4567888888899999999999999999 9999999999999765 679999999999
Q ss_pred ccCCC---CccccCCCCCCccccccCCc--C-ccccchhhHHHHHHHHhCCCCCCchhhhhhhccchh-hhhcccc--CC
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKNGRV--I-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN-LLMDSHL--EG 288 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~~~~--~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-~~~~~~~--~~ 288 (508)
....+ .+.+||+.|.|||++.+..+ . .+.|+||+|||||-+++|.+||.++.-+ .... ++..... .+
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~----~sl~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD----PSLKEQILKGRYAFGP 403 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC----ccHHHHHhcCcccccC
Confidence 88765 56799999999999986543 3 3789999999999999999887654221 1111 1111111 12
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
......+++..+||.+||..||++|||+.|+|+|-|--
T Consensus 404 ~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 404 LQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 23456789999999999999999999999999996653
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-50 Score=370.00 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=206.9
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
...+|.+.++||+|+||+||+|++ .++..||||.+.+.. ....+.+..|+.+|+.++|||||.+++++..++.+|||
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 356778888999999999999995 558899999997663 33456789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC------CCeEEcccCCccc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED------GDPRLSCFGLMKN 218 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~------~~~kl~Dfg~a~~ 218 (508)
||||.||+|.++++ ..+.+++..+..++.||+.||++||+++ ||||||||.|||++.. -.+||+|||+|+.
T Consensus 88 MEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 99999999999997 4568999999999999999999999999 9999999999999754 4589999999998
Q ss_pred cCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 219 SMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 219 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
..++ .+.+|++.|||||++....|+.|+|+||+|++||++++|+.||.......+.. ..-.........+...+
T Consensus 165 L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~---~~~k~~~~~~~~~~~~s 241 (429)
T KOG0595|consen 165 LQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL---YIKKGNEIVPVLPAELS 241 (429)
T ss_pred CCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH---HHhccccccCchhhhcc
Confidence 8876 46789999999999999999999999999999999999998876443221111 00011112223344445
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+.+|+...+..+|.+|.++.+...+
T Consensus 242 ~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 242 NPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred CchhhhhhHHHhcCccccCchHHhhhh
Confidence 566788888899999999888777655
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=384.68 Aligned_cols=245 Identities=19% Similarity=0.212 Sum_probs=214.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..|...+.||+|||+.||.++. .+|..||+|++.+.. ....+.+.+|+++.+.|+|||||+++++|.+.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4577778889999999999995 889999999997633 233568999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|+|+.++|..+++ ....+++.++..++.||+.||.|||+++ |||||||..|+|++++.++||+|||+|......
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999887 5678999999999999999999999999 999999999999999999999999999877643
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCCHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEEATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 299 (508)
.+.+|||.|+|||++....++..+||||+|||+|.||+|++||.. ..+......+... .+|...+.+..
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet--------k~vkety~~Ik~~~Y~~P~~ls~~A~ 246 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET--------KTVKETYNKIKLNEYSMPSHLSAEAK 246 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc--------chHHHHHHHHHhcCcccccccCHHHH
Confidence 567899999999999988999999999999999999999987543 3333333332222 34567788899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||.++|+.||.+|||+++|+.|-.-
T Consensus 247 dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 247 DLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred HHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 99999999999999999999988444
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-49 Score=380.50 Aligned_cols=251 Identities=27% Similarity=0.408 Sum_probs=217.9
Q ss_pred cccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.++++||+|-||+||.|.+++...||||.++... ...+.|.+|+.+|++|+|+|||+++|+|..++.+|||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 5678999999999999999888789999997653 345789999999999999999999999999889999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccc-----c
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS-----T 227 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-----~ 227 (508)
|.++|....+..+...+.+.++.|||+||+||++++ +|||||-..||||++++.+||+|||+|+...+..... -
T Consensus 288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf 366 (468)
T KOG0197|consen 288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF 366 (468)
T ss_pred HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence 999998766778999999999999999999999999 9999999999999999999999999999544432211 1
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
...|.|||.+..+.++.+||||||||+||||+|-...|+.. +....+-..++...+-+.|..+|..+.++|..||+
T Consensus 367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~----msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~ 442 (468)
T KOG0197|consen 367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG----MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWH 442 (468)
T ss_pred CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC----CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhh
Confidence 35699999999999999999999999999999965554332 22333445556666667788899999999999999
Q ss_pred cCCCCCCChHHHHHHHHHhhcC
Q 010529 308 YEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 308 ~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+|++||||..+...|+.+...
T Consensus 443 ~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 443 EDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCcccCCCHHHHHHHHHHhhhc
Confidence 9999999999999999888653
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-49 Score=349.18 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=200.5
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|+.++++|+|+||.||+++. ++|+.||||++..+.... .+-.++|+++|++|+|+|+|.++.+|.....++||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 577889999999999999995 569999999997554221 34578999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC-CC---C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM-DG---K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~-~~---~ 223 (508)
|+. ++-+.|.. ....++...+.+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+... ++ +
T Consensus 83 ~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT 159 (396)
T KOG0593|consen 83 CDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT 159 (396)
T ss_pred cch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence 975 44444543 4556889999999999999999999999 9999999999999999999999999999777 33 4
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhh--hhhh-----ccc---hhhhhcc--------
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHAL--DMIR-----GEN---LNLLMDS-------- 284 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~~-----~~~---~~~~~~~-------- 284 (508)
.++.|.+|+|||.+.| ..|....||||+||++.||++|.+.||+... .... +.- ...++..
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 5678999999999987 7899999999999999999999988776421 1110 000 0011100
Q ss_pred --ccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 --HLEG-----KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 --~~~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.... .--+..+.-+.+|+..||..||++|++.++++.|
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 0000 0012345678999999999999999999999987
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-48 Score=356.23 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
+.+++++++.||+|+||.||.++ .++++.+|+|++++.... +.+....|..+|..++||.||+++..|.+.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 45677899999999999999999 556999999999765432 35678899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC--
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-- 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~-- 221 (508)
|+||+.||.|..+|. +.+.+++..+.-++..|+.||.|||++| ||||||||+|||+|.+|+++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999996 5778999999999999999999999999 99999999999999999999999999985443
Q ss_pred --CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC---CCHHHHH
Q 010529 222 --GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---FSSEEAT 296 (508)
Q Consensus 222 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 296 (508)
..+++||+.|||||++.+..|+..+|.||||+++|||++|.+||... +...+.+.+.... .+.-.+.
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~--------~~~~~~~~I~~~k~~~~p~~ls~ 251 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE--------DVKKMYDKILKGKLPLPPGYLSE 251 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc--------cHHHHHHHHhcCcCCCCCccCCH
Confidence 34578999999999999999999999999999999999999886543 2233333333222 2333677
Q ss_pred HHHHHHHHhcccCCCCCC----ChHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERP----STKNLVVT 322 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rp----s~~~il~~ 322 (508)
+..+++.++|..||.+|. ++.+|-.|
T Consensus 252 ~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 252 EARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred HHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 899999999999999994 56665554
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=359.19 Aligned_cols=253 Identities=22% Similarity=0.326 Sum_probs=205.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCC--cceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD--ERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~~lv~E~ 147 (508)
.+...+.||+|+||+||++.. ++|...|||.+........+.+.+|+.+|++++|||||+++|...... .++++|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 355677889999999999995 458899999997654333567999999999999999999999855444 58999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCccccCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMKNSMD----- 221 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~~~~----- 221 (508)
+++|||.+++....+ .+++..+..+..||++||.|||++| |||+||||+|||++. ++.+||+|||+++....
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 999999999976444 7999999999999999999999999 999999999999999 79999999999886552
Q ss_pred --CCccccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 222 --GKSYSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 222 --~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.....||+.|||||++..+. ...++|||||||++.||+||++|+.... .....+..+......+.+|...+.+.
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~---~~~~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF---EEAEALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc---chHHHHHHHhccCCCCCCCcccCHHH
Confidence 23467999999999998533 3459999999999999999976654310 01111112222223345677788899
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+|+.+|+..||+.|||+.+++.|......
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 999999999999999999999999766544
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-47 Score=364.60 Aligned_cols=243 Identities=20% Similarity=0.294 Sum_probs=212.2
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
-..|....+||+|+.|.||.+. ..+++.||||++........+-+.+|+.+|+..+|+|||.++..|..++.++.||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 4456677889999999999999 677899999999888777778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
++||+|.+.+ ....+++.++..|+.+++.||+|||.+| |+|||||.+|||++.+|.+||+|||++...... .
T Consensus 352 m~ggsLTDvV---t~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 352 MEGGSLTDVV---TKTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred cCCCchhhhh---hcccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 9999999999 4566999999999999999999999999 999999999999999999999999998766554 4
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhh---hc-cccCCCCCHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL---MD-SHLEGKFSSEEATQVV 299 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~l~ 299 (508)
+.+||++|||||+.....|.++.||||||++++||+-|++|+..+ ..++.+ .. ....-..+...++.+.
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE-------~PlrAlyLIa~ng~P~lk~~~klS~~~k 500 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE-------NPLRALYLIATNGTPKLKNPEKLSPELK 500 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC-------ChHHHHHHHhhcCCCCcCCccccCHHHH
Confidence 678999999999999999999999999999999999999876421 111111 11 1112223566789999
Q ss_pred HHHHHhcccCCCCCCChHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+|+.+||..|+.+|+|+.|+|+|
T Consensus 501 dFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 501 DFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHHhhcchhcCCCHHHHhcC
Confidence 99999999999999999999998
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-47 Score=358.52 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=206.5
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCCh-hHHHHHHHHhccCC-CCCCcceeeeeeeCC-cceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDP-TQFKEEAEGVGKLR-RKRLANLIGYCCAGD-ERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~-~~~lv~ 145 (508)
.+|.++++||.|+||+||+|+ ..+|..||||+++..-..-. -.-++|+..|++|+ |||||++.+++.+.. .+|+||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 468899999999999999999 67799999999976443221 23568999999998 999999999999887 899999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|||+ .+|++++++. +..|++..+..|+.||++||+|+|.+| +.|||+||+|||+.....+||+|||+|+.....
T Consensus 90 E~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred Hhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCc
Confidence 9996 8999999875 789999999999999999999999999 999999999999998889999999999976654
Q ss_pred CccccCCCCCCccccc-cCCcCccccchhhHHHHHHHHhCCCCCCchh--hhhh---------------hccchhhhh--
Q 010529 223 KSYSTNLAYTPPEYLK-NGRVIPESVIYSFGTVLLDLLSGKHIPPSHA--LDMI---------------RGENLNLLM-- 282 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~elltg~~~~~~~~--~~~~---------------~~~~~~~~~-- 282 (508)
+.++.|.+|+|||++. .+-|+.+.|||++|||++|+.+-++.|++.. .+.+ .+..+...+
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 6678899999999975 5778999999999999999999998888641 1111 000000000
Q ss_pred ------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 283 ------DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 283 ------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...+. .+.+..+.++.++|.+|+.+||.+|||+.+++++-
T Consensus 247 ~~P~~~~~~l~-~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 247 RFPQVKPSPLK-DLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred CCCcCCCCChH-HhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 00000 11123678899999999999999999999999983
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=358.75 Aligned_cols=237 Identities=24% Similarity=0.328 Sum_probs=203.9
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHH
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLA 154 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~ 154 (508)
++-||.|+.|.||+|++++.. ||||+++... ..+|+-|++|+||||+.|.|+|.....+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~net-VAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHNET-VAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccCce-ehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 566799999999999997654 9999986332 45788899999999999999999999999999999999999
Q ss_pred HHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---CccccCCCC
Q 010529 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAY 231 (508)
Q Consensus 155 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~t~~y 231 (508)
..|+ ....++......|..+|+.|+.|||.+. |||||||+-||||..+-.+||+|||-++..... .++.||..|
T Consensus 201 ~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9997 6778999999999999999999999999 999999999999999999999999998865543 457899999
Q ss_pred CCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010529 232 TPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311 (508)
Q Consensus 232 ~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~ 311 (508)
||||+++..+.+.|.|||||||||||||||..|+..-.. ...+..+-...+.-..|..+++.+.-|+..||...|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999987543111 1111122233444456778889999999999999999
Q ss_pred CCCChHHHHHHHHHh
Q 010529 312 ERPSTKNLVVTLARL 326 (508)
Q Consensus 312 ~Rps~~~il~~L~~~ 326 (508)
.||+|.+|+.||+-.
T Consensus 354 NRPSFrqil~HldIa 368 (904)
T KOG4721|consen 354 NRPSFRQILLHLDIA 368 (904)
T ss_pred CCccHHHHHHHHhhc
Confidence 999999999999654
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=357.05 Aligned_cols=248 Identities=20% Similarity=0.256 Sum_probs=211.2
Q ss_pred hcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCC---CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE 140 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 140 (508)
...-.+|.+.+.||.|+|++|++|+ ..+++.+|||++.+.-. ...+.+.+|-.+|.+| .||.|++++..|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3456677888999999999999999 66799999999865322 2345688899999999 89999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
+|+|+||+++|+|.++|+ +-+.|++.....++.+|+.||+|||++| ||||||||+|||||.|+++||+|||.|+.+.
T Consensus 149 LYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred eEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999997 4578999999999999999999999999 9999999999999999999999999988554
Q ss_pred CC-----------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc
Q 010529 221 DG-----------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283 (508)
Q Consensus 221 ~~-----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~ 283 (508)
+. .+++||..|.+||++.++..+..+|+|+|||+||.|+.|++||.... +.... +.++.
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-eyliF---qkI~~ 301 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-EYLIF---QKIQA 301 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-HHHHH---HHHHH
Confidence 31 34789999999999999999999999999999999999997764321 11111 12211
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.-.++...++.+.+|+.++|..||.+|+|..+|.+|
T Consensus 302 --l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 302 --LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1234566667889999999999999999999999998
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-45 Score=344.39 Aligned_cols=254 Identities=19% Similarity=0.280 Sum_probs=208.2
Q ss_pred CCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+-++|++..+||.|..++||+|+ .+.+..||||++....... .+.+.+|+..|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 55678999999999999999999 7788999999997654333 578999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
.||.+||+.++++..-...+++..+..|+.++++||.|||.+| .||||||+.||||+.+|.|||+|||.+..+...
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999998766677999999999999999999999999 999999999999999999999999986544332
Q ss_pred -----CccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchh----hhhhhccchhhhhccccCCCCC
Q 010529 223 -----KSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHA----LDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
.+++||++|||||++.. ..|+.|+||||||++..||.+|..||...- .-+-.......+.......+..
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 45679999999999643 569999999999999999999998753210 0000011111000001111112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...+..+..++..||.+||.+|||+++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 2346789999999999999999999999988
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=322.99 Aligned_cols=250 Identities=19% Similarity=0.244 Sum_probs=205.5
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|..++.+|+|.||.||+|+ ..+|+.||||+++.....+ .....+|++.|+.++|+||+.++++|.+.+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 56778899999999999999 6789999999998654332 34688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
++ .+|+..+++ ....++..++..++.++++||+|||++. |+||||||.|+|++.+|.+||+|||+++.+....
T Consensus 83 m~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 97 789999976 6678999999999999999999999999 9999999999999999999999999999776542
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhh--hh---h---h---ccchhh-----------
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHAL--DM---I---R---GENLNL----------- 280 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~---~---~---~~~~~~----------- 280 (508)
..+.|.+|+|||.+.| ..|+...||||.||++.||+-|.+.++++.. +. + . ...+..
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 2367899999999887 5689999999999999999999976665421 00 0 0 000000
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...........+..+.+..+|+.++|..||.+|+|+++++++-
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 0111111112334567789999999999999999999999884
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=348.45 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=200.9
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccceee
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~lv 144 (508)
+.|+.+++||+|.||.||+|+ ..+|+.||+|+++..... ...-..+||.+|++|+||||+++.+...+. +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 457789999999999999999 788999999999866532 244578999999999999999999998876 689999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
+|||+ -+|.-++.. ..-.|++.++..++.|++.||+|||.+| |+|||||.+|||||.+|.+||+|||+|+.....
T Consensus 197 FeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred Eeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 99997 578887743 4558999999999999999999999999 999999999999999999999999999966544
Q ss_pred ---CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhh--hhh---------hccchh--hhhc-c
Q 010529 223 ---KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHAL--DMI---------RGENLN--LLMD-S 284 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~---------~~~~~~--~~~~-~ 284 (508)
+..+.|.+|+|||.+.| ..|+...|+||.||||.||++|++.+++... ++. ....+. .+.. .
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 34567999999999987 5799999999999999999999977665311 100 000011 0000 0
Q ss_pred ccCCC--C-------CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 HLEGK--F-------SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 ~~~~~--~-------~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+... . ....+....+|+..+|..||.+|.|+.+++..
T Consensus 354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 00000 0 11235678899999999999999999999976
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=346.26 Aligned_cols=255 Identities=18% Similarity=0.199 Sum_probs=209.2
Q ss_pred hcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--------------ChhHHHHHHHHhccCCCCCCcc
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--------------DPTQFKEEAEGVGKLRRKRLAN 130 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~nIv~ 130 (508)
....+.|.++..||+|.||.|-+|+ ..+++.||||++.+.... ..+...+|+.+|++|.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456789999999999999999999 566999999999653211 1357899999999999999999
Q ss_pred eeeeeeeC--CcceeeeecCCCCCHHHHhhccCCCC-cChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 131 LIGYCCAG--DERLLVAEYMPNDTLAKHLFHWEKQT-IEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 131 ~~~~~~~~--~~~~lv~E~~~~~sL~~~l~~~~~~~-l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
++.+..+. +.+|||+|||..|.+...- .... +++.+++.++.+++.||+|||.+| ||||||||+|+||+++|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCc
Confidence 99998764 5789999999988875432 3444 999999999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCC---------CccccCCCCCCccccccCC---c-CccccchhhHHHHHHHHhCCCCCCchhhhhhh
Q 010529 208 PRLSCFGLMKNSMDG---------KSYSTNLAYTPPEYLKNGR---V-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~---------~~~~~t~~y~aPE~~~~~~---~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~ 274 (508)
+||+|||.+.....+ ...+|||.|+|||...++. + +.+.||||+||+||+|+.|+.||.++. .
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~----~ 324 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF----E 324 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch----H
Confidence 999999998765322 2357999999999987632 3 458899999999999999999987653 2
Q ss_pred ccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 275 GENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
......++...+.-+...++.+.+.+||.++|.+||+.|.+..+|..|.+....
T Consensus 325 ~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 325 LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 222334444444333344567889999999999999999999999999887665
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=348.67 Aligned_cols=243 Identities=18% Similarity=0.279 Sum_probs=208.2
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
|..+..||+|+||.||+|. ..+++.||+|++......+ .+++.+|+.+|.+++++||.++||.+..+..++++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 4556788999999999999 6679999999997654433 5789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSY 225 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 225 (508)
||++.+.++ .+..+.+..+.-|+.+++.||.|||..+ .+|||||+.|||+..+|.+||+|||.+...... .++
T Consensus 95 gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 95 GGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred Ccchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 999999995 4445588888889999999999999999 999999999999999999999999998765543 578
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
+||+.|||||++.+..|+.++||||||++.+||.+|.+|+.. .....+..++.....+......++.+.+|+..|
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~-----~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK-----LHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEAC 246 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc-----cCcceEEEeccCCCCCccccccCHHHHHHHHHH
Confidence 999999999999988999999999999999999999966432 112223333344334444446678899999999
Q ss_pred cccCCCCCCChHHHHHH
Q 010529 306 LQYEPRERPSTKNLVVT 322 (508)
Q Consensus 306 l~~~p~~Rps~~~il~~ 322 (508)
|.+||+.|||+.++++|
T Consensus 247 L~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 247 LDKNPEFRPSAKELLKH 263 (467)
T ss_pred hhcCcccCcCHHHHhhh
Confidence 99999999999999988
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=353.16 Aligned_cols=240 Identities=21% Similarity=0.282 Sum_probs=209.8
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|-+.+.||+|+||+||||+ ..+.+.||+|.+.+..... .+.+.+|+++++.++|||||.++++|....++++|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 45667778999999999999 5568999999998765443 55799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
|.| +|..+|. .++.++++.+..|+.+++.||.|||+++ |+|||+||.|||++..|.+|+||||+|+.....+
T Consensus 83 a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 83 AVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 975 9999997 5678999999999999999999999999 9999999999999999999999999999776653
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 301 (508)
...|||.|||||...+.+|+..+|+||+||++||+++|++||... .+.+++..+... ..|...+..+..|
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--------si~~Lv~~I~~d~v~~p~~~S~~f~nf 230 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--------SITQLVKSILKDPVKPPSTASSSFVNF 230 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--------HHHHHHHHHhcCCCCCcccccHHHHHH
Confidence 457999999999999999999999999999999999999886543 223333333322 2355778899999
Q ss_pred HHHhcccCCCCCCChHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~ 322 (508)
+...|.+||..|.|-.+++.|
T Consensus 231 l~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 231 LQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHhhcChhhcccHHHHhcC
Confidence 999999999999999999988
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=353.84 Aligned_cols=249 Identities=20% Similarity=0.246 Sum_probs=210.0
Q ss_pred CCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCC----CC-CChhHHHHHHHHhccCC-CCCCcceeeeeeeCCc
Q 010529 68 NFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKV----AW-PDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDE 140 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~ 140 (508)
....|.+.+.||.|+||.|++|. ..++..||||++... .. ...+.+.+|+.+++.++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 35578889999999999999998 556899999977654 11 23456778999999998 9999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCcccc
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNS 219 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~ 219 (508)
.|+|||||.||+|.+++.+ .+.+.+..+..++.|++.|++|||++| |+||||||+|||++.+ +++||+|||++...
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 9999999999999999974 678999999999999999999999999 9999999999999999 99999999999877
Q ss_pred C-C---CCccccCCCCCCccccccCC-cC-ccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCC
Q 010529 220 M-D---GKSYSTNLAYTPPEYLKNGR-VI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFS 291 (508)
Q Consensus 220 ~-~---~~~~~~t~~y~aPE~~~~~~-~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 291 (508)
. . ..+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||... ....+...+..+ .++
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~--------~~~~l~~ki~~~~~~~p 243 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS--------NVPNLYRKIRKGEFKIP 243 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc--------cHHHHHHHHhcCCccCC
Confidence 2 2 35778999999999999877 85 6999999999999999999887642 222222222222 234
Q ss_pred HHH-HHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 292 SEE-ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 292 ~~~-~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
... +.++..|+.+||..||.+|+|+.+|+.+=|-..
T Consensus 244 ~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 244 SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 444 888999999999999999999999997655543
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=355.86 Aligned_cols=249 Identities=20% Similarity=0.261 Sum_probs=219.6
Q ss_pred cCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
+....|++.+.||.|+.|.|-+|+ ..+|+.+|||++.+... .....+.+|+-+|+.+.||||+++++++.+..++|
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY 88 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence 445678899999999999999999 67899999999976521 12456899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+|.||++||.|.+++. .++++++.++.+++.||+.|+.|||..+ |+|||+||+|+|||..+++||+|||+|..-.++
T Consensus 89 lvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999999997 6788999999999999999999999999 999999999999999999999999999877666
Q ss_pred ---CccccCCCCCCccccccCCcC-ccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC--CCHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEEAT 296 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 296 (508)
.+.+|++.|.+||++.|.+|. .++||||+||||+.||||+.||.+ ..++.++.....+. .|...+.
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------dNir~LLlKV~~G~f~MPs~Is~ 237 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------DNIRVLLLKVQRGVFEMPSNISS 237 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------ccHHHHHHHHHcCcccCCCcCCH
Confidence 467899999999999999984 599999999999999999999654 34444444444443 4677889
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
++++|+.+|+..||++|.|+.+|++|-+-.
T Consensus 238 eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~ 267 (786)
T KOG0588|consen 238 EAQDLLRRMLDVDPSTRITTEEILKHPFLS 267 (786)
T ss_pred HHHHHHHHHhccCccccccHHHHhhCchhh
Confidence 999999999999999999999999996554
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-45 Score=325.78 Aligned_cols=234 Identities=20% Similarity=0.240 Sum_probs=204.8
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCCh---hHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDP---TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+++++++.||.|+||.|.+++ ..+|..+|+|++.+...... +...+|..+|+.+.||.++++++.|.+.+.+|||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 4567889999999999999999 45689999999976544333 3577899999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-C
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-K 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 223 (508)
|||++||.|..+++ ..++++++.+.-++.||+.||+|||+.+ |++||+||+|||+|.+|.+||+|||+|+..... -
T Consensus 123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 99999999999997 5678999999999999999999999999 999999999999999999999999999877665 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 301 (508)
+.+|||.|+|||++....+...+|.|||||++|||+.|.+||..+.. ..+...++.+ .+|+-.+.++.+|
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~~fs~~~kdL 271 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPSYFSSDAKDL 271 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCcccCHHHHHH
Confidence 56899999999999999999999999999999999999988764421 2233333333 3577778899999
Q ss_pred HHHhcccCCCCC
Q 010529 302 ASQCLQYEPRER 313 (508)
Q Consensus 302 ~~~cl~~~p~~R 313 (508)
+.++|+.|-.+|
T Consensus 272 l~~LL~vD~t~R 283 (355)
T KOG0616|consen 272 LKKLLQVDLTKR 283 (355)
T ss_pred HHHHHhhhhHhh
Confidence 999999999999
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-45 Score=348.27 Aligned_cols=251 Identities=17% Similarity=0.170 Sum_probs=206.3
Q ss_pred hcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
....++|.++.+||+|+||+||+|+ ..+|..+|+|++++..... .+.+..|-.+|...++|+||+++..|.+.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 3456788999999999999999999 5669999999998764332 44578899999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
||||||++||++..+|. ..+.|++..+..++.+++.|+.-||..| +|||||||+|+|||..|++||+|||++.....
T Consensus 217 YLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999997 6778999999999999999999999999 99999999999999999999999999742110
Q ss_pred -------------------------------C--------------------CccccCCCCCCccccccCCcCccccchh
Q 010529 222 -------------------------------G--------------------KSYSTNLAYTPPEYLKNGRVIPESVIYS 250 (508)
Q Consensus 222 -------------------------------~--------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~s 250 (508)
. .+.+|||-|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 0235899999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCC---ChHHHHHH
Q 010529 251 FGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERP---STKNLVVT 322 (508)
Q Consensus 251 lG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp---s~~~il~~ 322 (508)
||||+||||.|-+||.++.-...-.. + .-+...+..+.....+.+..+||.+|+. ||++|. .+.||.+|
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rk-I-~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRK-I-VNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHH-H-HHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 99999999999988765432111100 0 0111122222233456889999999999 999995 57777776
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-45 Score=351.67 Aligned_cols=255 Identities=21% Similarity=0.296 Sum_probs=206.3
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+++..+...||+|.||+||+|+|.+. ||||+++...... .+.|.+|+.++++-+|.||+-+.|+|..++. .||+-
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whGd--VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHGD--VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred HHHhhccceeccccccceeecccccc--eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence 44456778899999999999998765 9999998765544 4579999999999999999999999988777 99999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----- 221 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----- 221 (508)
+|+|.||+.+|+. ....|...+.+.|+.||+.|+.|||.++ |||||||..||++.+++.|||+|||++....-
T Consensus 468 wCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 468 WCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred hccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 9999999999965 3457899999999999999999999999 99999999999999999999999999863321
Q ss_pred -CCccccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 222 -GKSYSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 222 -~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
-....|...|||||+++. .+|+..+||||||+|+|||+||..|+.....+.+....-+..+.+. .......++++
T Consensus 546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd-~s~~~s~~pk~ 624 (678)
T KOG0193|consen 546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD-LSKIRSNCPKA 624 (678)
T ss_pred ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-chhhhccCHHH
Confidence 123456788999999974 4689999999999999999999988653322211100000000000 01123567889
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+.+|+..||..++++||.+.+|+..|+.+..+
T Consensus 625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 625 MKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 99999999999999999999999988887653
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=368.58 Aligned_cols=255 Identities=25% Similarity=0.336 Sum_probs=214.2
Q ss_pred cccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
+..+.++||+|+||.||+|+.. ....||||.++..... ...+|.+|+++|..|+|||||+++|+|.+++.++|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 3456789999999999999943 3567999999887765 46789999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhcc--------C----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEc
Q 010529 144 VAEYMPNDTLAKHLFHW--------E----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLS 211 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~--------~----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~ 211 (508)
|+|||..|+|.+||... . ..+++..+.+.|+.|||.||.||-++. +|||||-..|+||.++..|||+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEec
Confidence 99999999999999743 1 223889999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCCccc------cCCCCCCccccccCCcCccccchhhHHHHHHHHhC-CCCCCchhhhhhhccchhhhhcc
Q 010529 212 CFGLMKNSMDGKSYS------TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG-KHIPPSHALDMIRGENLNLLMDS 284 (508)
Q Consensus 212 Dfg~a~~~~~~~~~~------~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~ 284 (508)
|||+++.......+. -..+||+||.+..++++.+||||||||||||++|- +.|+.+. ..+.+-..+..
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl-----Sn~EVIe~i~~ 720 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL-----SNQEVIECIRA 720 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc-----chHHHHHHHHc
Confidence 999999776654332 24789999999999999999999999999999994 4454331 22222223332
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
...-..|..+|.++.+||..||+.+|.+||+|+||-..|.......+
T Consensus 721 g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 721 GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 22245677889999999999999999999999999999999875443
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=325.95 Aligned_cols=266 Identities=18% Similarity=0.221 Sum_probs=210.0
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeC--
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAG-- 138 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-- 138 (508)
..++..+.|+.+.+|++|+||.||+|+ .++++.||+|+++...... .-.-++|+.+|.+++|||||.+-.+....
T Consensus 70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 345667788999999999999999999 5668999999998655222 22468999999999999999999987643
Q ss_pred CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
+..|||||||+ -+|..++.. ..++++..++.-+..|+++||.|||.+. |+|||||++|+|+++.|.+||+|||+|+.
T Consensus 150 d~iy~VMe~~E-hDLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 150 DKIYIVMEYVE-HDLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ceeeeeHHHHH-hhHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhh
Confidence 56899999997 689998864 4578999999999999999999999999 99999999999999999999999999997
Q ss_pred cCCC----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhh--h---h--hccchhhhhc---
Q 010529 219 SMDG----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALD--M---I--RGENLNLLMD--- 283 (508)
Q Consensus 219 ~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~---~--~~~~~~~~~~--- 283 (508)
.... +..+.|.+|+|||.+.+. .|+...|+||+|||+.||+++++.+++...- . + .+..-..++.
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7665 455779999999999874 5899999999999999999999887764210 0 0 0000000000
Q ss_pred ---------------cccCCCCCHH-HHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 284 ---------------SHLEGKFSSE-EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 284 ---------------~~~~~~~~~~-~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
..++..+... .++.-.+|+..+|..||.+|.|+++.++|=.--....+.
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~ 371 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI 371 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence 0111111111 357788999999999999999999999986555433333
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=353.94 Aligned_cols=253 Identities=19% Similarity=0.296 Sum_probs=200.7
Q ss_pred cccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCC-cc
Q 010529 71 SDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGD-ER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~-~~ 141 (508)
+|++.+.||.|+||.||+|.. .++..||||++...... ....+.+|+.++..+ +||||++++++|...+ ..
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 577889999999999999974 23567999998754322 245689999999999 8999999999987644 57
Q ss_pred eeeeecCCCCCHHHHhhccC------------------------------------------------------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 161 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~------------------------------------------------------------ 161 (508)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 89999999999999986421
Q ss_pred CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC------ccccCCCCCCcc
Q 010529 162 KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPE 235 (508)
Q Consensus 162 ~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE 235 (508)
...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134788899999999999999999999 9999999999999999999999999997543321 223457899999
Q ss_pred ccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010529 236 YLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERP 314 (508)
Q Consensus 236 ~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp 314 (508)
++.+..++.++||||||+++|||++ |..|+...... ......+........+...++.+.+|+.+||..||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN----EEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9988889999999999999999997 87776532110 001111111111223345567899999999999999999
Q ss_pred ChHHHHHHHHHhhc
Q 010529 315 STKNLVVTLARLQT 328 (508)
Q Consensus 315 s~~~il~~L~~~~~ 328 (508)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=333.84 Aligned_cols=246 Identities=19% Similarity=0.272 Sum_probs=216.4
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChh---HHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..|++.+.||+|.||.|-++. ...|+.||||.+++....+.. .+.+|++||+.|+||||+.++.+|...+...|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 457888999999999999999 578999999999887766644 5789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||..+|.|++++. ..+.|++.++..++.||+.|+.|+|.++ ++|||||.+|||+|+++++||+|||++..+...
T Consensus 133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 9999999999997 5678999999999999999999999999 999999999999999999999999999877765
Q ss_pred CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC-CHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF-SSEEATQVVG 300 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 300 (508)
++++|++.|.+||++.|.+| .+..|-|||||+||.|+.|..||. +.+...++..+..+.+ .+..+.....
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD--------G~Dhk~lvrQIs~GaYrEP~~PSdA~g 281 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD--------GRDHKRLVRQISRGAYREPETPSDASG 281 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC--------CchHHHHHHHhhcccccCCCCCchHHH
Confidence 57899999999999999988 579999999999999999998854 4444555555444433 2334566788
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
||.+||..||++|.|+.+|..|-|--
T Consensus 282 LIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 282 LIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred HHHHHHhcCcccchhHHHHhhhheee
Confidence 99999999999999999999996653
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=339.04 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=200.4
Q ss_pred ccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeee----CCcceeeeecC
Q 010529 76 SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERLLVAEYM 148 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~lv~E~~ 148 (508)
..||.|++|.||+|.+ +|+.||||+++...... .+.|.+|+.+|++++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 3569999999999998 57789999997654333 3568899999999999999999999876 34678999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Cccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYS 226 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~ 226 (508)
+||+|.+++.. ...+++...+.++.|++.||.|||+. + ++||||||+|||++.++.+||+|||++...... ....
T Consensus 105 ~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~ 181 (283)
T PHA02988 105 TRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNV 181 (283)
T ss_pred CCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhcccccccc
Confidence 99999999963 45789999999999999999999985 6 899999999999999999999999998754433 3456
Q ss_pred cCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 227 TNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 227 ~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
++..|+|||++.+ ..++.++|||||||++|||+||+.||....... ....+.........+...+..+.+|+.+
T Consensus 182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~l~~li~~ 257 (283)
T PHA02988 182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE----IYDLIINKNNSLKLPLDCPLEIKCIVEA 257 (283)
T ss_pred CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhcCCCCCCCCcCcHHHHHHHHH
Confidence 7899999999976 678999999999999999999998865421111 0111111222223344567889999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhh
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
||+.||++|||+.++++.|+.++
T Consensus 258 cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 258 CTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HhcCCcccCcCHHHHHHHHHHHH
Confidence 99999999999999999998875
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=339.37 Aligned_cols=249 Identities=17% Similarity=0.208 Sum_probs=201.9
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|++++.||+|+||.||+|.. .+++.||||.+...... ....+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 45678889999999999994 67899999998654322 234678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Cc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KS 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~ 224 (508)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 99999998886544457899999999999999999999999 999999999999999999999999998765433 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..||..|+|||++.+..++.++|||||||++|+|++|+.||......... ......+.. .....+...+..+.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRVKE-DQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHhhc-ccccCCccCCHHHHHHHHH
Confidence 46899999999999889999999999999999999999886542111000 001111111 1112344456789999999
Q ss_pred hcccCCCCCCC-----hHHHHHHH
Q 010529 305 CLQYEPRERPS-----TKNLVVTL 323 (508)
Q Consensus 305 cl~~~p~~Rps-----~~~il~~L 323 (508)
||..||.+||+ +.++++|-
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhcCH
Confidence 99999999997 78888773
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=341.41 Aligned_cols=244 Identities=19% Similarity=0.191 Sum_probs=214.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCc-ceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE-RLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~-~~lv~ 145 (508)
+.|..++++|+|+||.+++++. .++..+++|++....... .+...+|+.+++++.|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5678899999999999999994 457789999997654333 4468899999999999999999999999888 89999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
+||+||+|.+.+...++..++++.++.|+.|++.|+.|||++. |+|||||+.||+++.++.|+|+|||+|+...+.
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999998877788999999999999999999999888 999999999999999999999999999987765
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc---CCCCCHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL---EGKFSSEEATQV 298 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 298 (508)
.+..||+.||.||.+.+.+|..|+|||||||++|||++-+++|.. .++..++..+. ..+.+...+.++
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a--------~~m~~Li~ki~~~~~~Plp~~ys~el 234 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA--------SNMSELILKINRGLYSPLPSMYSSEL 234 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc--------cchHHHHHHHhhccCCCCCccccHHH
Confidence 357899999999999999999999999999999999999987543 33333333222 234567788999
Q ss_pred HHHHHHhcccCCCCCCChHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..++..||..+|..||++.+++.+
T Consensus 235 ~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 235 RSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999999987
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=347.54 Aligned_cols=247 Identities=19% Similarity=0.175 Sum_probs=197.4
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.++++++++.||.|+||.||+|+. .+++.||||++...... ....+.+|+++++.++|+||+++++++...+..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 456677889999999999999995 46899999998654322 2457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+++++|.... ..++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999986532 3567788899999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc---cccCCCCCHH
Q 010529 223 -KSYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD---SHLEGKFSSE 293 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 293 (508)
....||..|+|||++.. ...+.++|||||||++|||++|+.||..... .....+.. .......+..
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 299 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-----GDWASLMCAICMSQPPEAPAT 299 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhccCCCCCCCc
Confidence 34578999999998743 2235689999999999999999988652110 11111110 0111223345
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+.++.+|+.+||..||++|||+.++++|-+-.
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~ 332 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSAMQLLQHPFIL 332 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence 667899999999999999999999999985433
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-44 Score=307.70 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=214.1
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+++++.+.||+|-||.||+|+ .+++-.||+|++-+.. .....++.+|+++-+.|+||||++++++|.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 345677889999999999999 5668889999986543 223568999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--C
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--K 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~ 223 (508)
||..+|+|...|.......+++.....++.|++.||.|+|.++ ||||||||+|+|++..+.+||+|||.+.....+ .
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~ 180 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK 180 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCce
Confidence 9999999999998767778999999999999999999999999 999999999999999999999999988755433 5
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
+.+||.-|.+||+..+..++...|+|++|++.||++.|.+||.... ..+....+..-. -.+|...+....++|.
T Consensus 181 tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~----~~etYkrI~k~~--~~~p~~is~~a~dlI~ 254 (281)
T KOG0580|consen 181 TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS----HSETYKRIRKVD--LKFPSTISGGAADLIS 254 (281)
T ss_pred eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh----hHHHHHHHHHcc--ccCCcccChhHHHHHH
Confidence 6789999999999999999999999999999999999998765432 222223322221 2345667888999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHh
Q 010529 304 QCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+|+..+|.+|.+..+++.|-+-.
T Consensus 255 ~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 255 RLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred HHhccCccccccHHHHhhhHHHH
Confidence 99999999999999999986543
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=361.81 Aligned_cols=255 Identities=19% Similarity=0.185 Sum_probs=201.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.+|++++.||+|+||.||+|.. .+++.||||++....... .++|.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4688899999999999999995 458899999997543222 357999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhcc---------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 146 EYMPNDTLAKHLFHW---------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 146 E~~~~~sL~~~l~~~---------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
||++|++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcc
Confidence 999999999988532 1234567788999999999999999999 999999999999999999999999998
Q ss_pred cccCC----------------------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh
Q 010529 217 KNSMD----------------------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274 (508)
Q Consensus 217 ~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~ 274 (508)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.|+.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 75411 01235899999999999889999999999999999999999886432110000
Q ss_pred ccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-ChHHHHHHHHHhhc
Q 010529 275 GENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERP-STKNLVVTLARLQT 328 (508)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp-s~~~il~~L~~~~~ 328 (508)
....+............++.+.+++.+||..||++|| ++.++++.|+....
T Consensus 241 ---~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 241 ---YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred ---hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0000000000001123456789999999999999995 66777777777643
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=346.41 Aligned_cols=255 Identities=21% Similarity=0.322 Sum_probs=209.3
Q ss_pred cccccCCCCcccEEEEEEEcC--C--CE-EEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 73 NIVSESGEKAANVVYKGRLEN--R--QW-IAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~--~--~~-vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+.++||+|+||+||+|++.. + .. ||||..+... .....+|++|+++|++++|||||+++|++.....++||
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 445889999999999999543 2 23 8999987522 22356899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
||+|.||+|.++|+.. ...++..+...++.+.+.||+|||+++ +|||||-..|+|++.++.+||+|||+++....-.
T Consensus 240 mEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 9999999999999753 336999999999999999999999999 9999999999999999999999999987554211
Q ss_pred ---ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 224 ---SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 224 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
...-...|+|||.+..+.|+.++|||||||++||+++ |..|+++.... .....+.....+-..+...+..+.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~kI~~~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAKIVKNGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----HHHHHHHhcCccCCCCCCCHHHHH
Confidence 1123478999999999999999999999999999999 67665543211 111122233344445567788899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHhhcCCCCC
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~ 333 (508)
.++.+||..+|++||||.++.+.|+.+......+
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999998765543
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=344.79 Aligned_cols=245 Identities=18% Similarity=0.299 Sum_probs=209.9
Q ss_pred hcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE 140 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 140 (508)
.-+..++.++++||+|+||.|+++.. .+++.+|||++++... .+.+..+.|.+++... +||.++.++..|...++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 34567789999999999999999995 4588999999987643 3456788899998888 69999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
+|+||||+.||++..+. ..+.+++..+.-++..|+.||.|||+++ |||||||.+|||||.+|++||+|||+++...
T Consensus 444 l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999999954433 5678999999999999999999999999 9999999999999999999999999998654
Q ss_pred ----CCCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC--CCHHH
Q 010529 221 ----DGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEE 294 (508)
Q Consensus 221 ----~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 294 (508)
...+++|||.|||||++.+..|+...|.|||||+|||||.|+.||+++ +..++++.++..+ +|...
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--------dEee~FdsI~~d~~~yP~~l 591 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--------DEEEVFDSIVNDEVRYPRFL 591 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHhcCCCCCCCcc
Confidence 235789999999999999999999999999999999999999997643 3344444444332 46677
Q ss_pred HHHHHHHHHHhcccCCCCCCC-----hHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps-----~~~il~~ 322 (508)
+.+...++.++|..+|++|.- +.+|.+|
T Consensus 592 s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 592 SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred cHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 899999999999999999964 4666655
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=341.64 Aligned_cols=255 Identities=20% Similarity=0.229 Sum_probs=204.3
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.++|++++.||+|+||.||+++.. ++..||+|.+...... ....+.+|+++++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 356788999999999999999954 5888999998754321 23579999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Cc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KS 224 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~ 224 (508)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+.|+||||||+|||++.++.+||+|||++...... ..
T Consensus 84 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (331)
T cd06649 84 HMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (331)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccccccc
Confidence 9999999999963 4568999999999999999999998644999999999999999999999999998755432 34
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh---ccc------------------------
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR---GEN------------------------ 277 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~~~------------------------ 277 (508)
..|++.|+|||++.+..++.++|||||||++|||+||+.|+......... ...
T Consensus 162 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
T cd06649 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVS 241 (331)
T ss_pred CCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccc
Confidence 56899999999999888999999999999999999999887532111000 000
Q ss_pred -----------hhhhhc----cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 278 -----------LNLLMD----SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 278 -----------~~~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
...+.+ ...........+.++.+|+.+||..||++|||+.++++|.+-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 242 GHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred ccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 000000 000000112346789999999999999999999999998654
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=341.50 Aligned_cols=243 Identities=20% Similarity=0.234 Sum_probs=204.3
Q ss_pred cccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.-++.||.|+||.||.++ ..+..+||||++.-...+. -.+++.|++.|+++.|||+|.+.|+|..+...|||||||
T Consensus 29 ~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC 108 (948)
T KOG0577|consen 29 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC 108 (948)
T ss_pred HHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence 346789999999999999 6778999999997665444 347999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccccC
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t 228 (508)
- ||-.+++.- ...++-+.++..|+.+.+.||.|||+.+ .||||||..|||+++.|.|||+|||.|....+..+++||
T Consensus 109 l-GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT 185 (948)
T KOG0577|consen 109 L-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT 185 (948)
T ss_pred h-ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence 6 677777743 5678999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 229 LAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 229 ~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
|+|||||++. .+.|+-++|||||||++.||.-.++|.+. +..+..-..+.+--.+.+ .....+..+.+|+..|
T Consensus 186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFn-MNAMSALYHIAQNesPtL---qs~eWS~~F~~Fvd~C 261 (948)
T KOG0577|consen 186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN-MNAMSALYHIAQNESPTL---QSNEWSDYFRNFVDSC 261 (948)
T ss_pred ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccC-chHHHHHHHHHhcCCCCC---CCchhHHHHHHHHHHH
Confidence 9999999986 47899999999999999999999866432 211111111111111111 1345678899999999
Q ss_pred cccCCCCCCChHHHHHH
Q 010529 306 LQYEPRERPSTKNLVVT 322 (508)
Q Consensus 306 l~~~p~~Rps~~~il~~ 322 (508)
|++-|.+|||..+++.|
T Consensus 262 LqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 262 LQKIPQERPTSEELLKH 278 (948)
T ss_pred HhhCcccCCcHHHHhhc
Confidence 99999999999999887
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=340.35 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=203.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|++++.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 5778899999999999999954 688999999864321 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 225 (508)
|+++++|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999999986 3457899999999999999999999999 999999999999999999999999998865443 345
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
.||+.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+.... ..++...+..+.+|+.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI----YEKILAGK--LEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCC--cCCCccCCHHHHHHHHHH
Confidence 689999999999888899999999999999999999988654321110 11111111 123344567799999999
Q ss_pred cccCCCCCCC-----hHHHHHHHH
Q 010529 306 LQYEPRERPS-----TKNLVVTLA 324 (508)
Q Consensus 306 l~~~p~~Rps-----~~~il~~L~ 324 (508)
|..||.+||+ +.+++.|-+
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCcc
Confidence 9999999995 889888754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=330.51 Aligned_cols=251 Identities=19% Similarity=0.241 Sum_probs=203.0
Q ss_pred CCcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
...|++.+.||+|+||.||+|.+. .+..||+|.++...... ...|.+|+.++.+++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 345778889999999999999853 35689999987653222 3578999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.++++|||.+.......
T Consensus 84 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 84 VTEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999864 3457899999999999999999999999 9999999999999999999999999876433221
Q ss_pred -----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 224 -----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...++..|+|||.+.+..++.++||||||+++||+++ |..|+...... .....+......+.+..++..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVIKAVEDGFRLPAPRNCPNL 236 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHCCCCCCCCCCCCHH
Confidence 1234568999999988899999999999999999775 88776432111 011111111222334456778
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+.+++.+||..+|.+|||+.+|++.|.++
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=344.71 Aligned_cols=246 Identities=15% Similarity=0.174 Sum_probs=204.2
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
+++|.+++.||.|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 567889999999999999999954 58899999986532 12345788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-C
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-K 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 223 (508)
|||++|++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 97 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 99999999999986 3457889999999999999999999999 999999999999999999999999998865443 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|+|||++.+..++.++|||||||++|+|+||..||...... .....+.... ..++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~i~~~~--~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF----RIYEKILAGR--LKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH----HHHHHHhcCC--cCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999886543211 0011111111 1223335667899999
Q ss_pred HhcccCCCCCCC-----hHHHHHHH
Q 010529 304 QCLQYEPRERPS-----TKNLVVTL 323 (508)
Q Consensus 304 ~cl~~~p~~Rps-----~~~il~~L 323 (508)
+||..||.+||+ +.+++.|-
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 999999999986 68888773
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=346.50 Aligned_cols=251 Identities=18% Similarity=0.296 Sum_probs=199.8
Q ss_pred cccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 71 SDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
+|.+.+.||+|+||.||+|++ .++..||||+++.... ...+.+.+|+.++..+ +||||++++++|...+..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 567889999999999999973 2356899999975432 2345789999999999 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC-------------------------------------------------------------
Q 010529 143 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 161 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~------------------------------------------------------------- 161 (508)
+|||||+||+|.+++....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999999999999986421
Q ss_pred ------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-----
Q 010529 162 ------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS----- 224 (508)
Q Consensus 162 ------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~----- 224 (508)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 124788899999999999999999999 99999999999999999999999999875543321
Q ss_pred -cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 225 -YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 225 -~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
..++..|+|||++.+..++.++||||||+++|||++ |..|+...... ......+........+...+.++.+|+
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li 350 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMIKEGYRMLSPECAPSEMYDIM 350 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHHHhCccCCCCCCCCHHHHHHH
Confidence 223467999999998899999999999999999998 66554332110 111112222212222333467899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHh
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+||..||++|||+.+|++.|+..
T Consensus 351 ~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 351 KSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHccCChhHCcCHHHHHHHHHhh
Confidence 999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-43 Score=346.96 Aligned_cols=252 Identities=20% Similarity=0.309 Sum_probs=202.2
Q ss_pred cccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCC-hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 71 SDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
+|++.+.||+|+||.||+|+.. ++..||||++....... ...+.+|+.+++.+ +|+|||+++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 5778899999999999999842 23579999997544322 45688999999999 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC-------------------------------------------------------------
Q 010529 143 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 161 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~------------------------------------------------------------- 161 (508)
+|||||++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999885321
Q ss_pred -------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc------cccC
Q 010529 162 -------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS------YSTN 228 (508)
Q Consensus 162 -------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~t 228 (508)
...+++..+++|+.||+.||.|||+++ ++||||||+|||++.++.+||+|||++........ ..++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 124788899999999999999999999 99999999999999999999999999875543321 2234
Q ss_pred CCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
..|+|||++.+..++.++|||||||++|+|++ |+.|+..... ................+...++++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV----NSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc----cHHHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999988889999999999999999997 8877654321 111112222222222333346789999999999
Q ss_pred cCCCCCCChHHHHHHHHHhh
Q 010529 308 YEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 308 ~~p~~Rps~~~il~~L~~~~ 327 (508)
.||.+|||+.++++.|+.+.
T Consensus 354 ~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CChhhCcCHHHHHHHHHHHh
Confidence 99999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=342.13 Aligned_cols=237 Identities=20% Similarity=0.265 Sum_probs=197.2
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.||+|+||.||+|+. .+|+.||||++..... .....+.+|+.+++.++||||+++++++...+..+|||||++|++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 579999999999995 5689999999975322 223467889999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCccccC
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYSTN 228 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~t 228 (508)
|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 999886 3457899999999999999999999999 99999999999999999999999999875322 2345689
Q ss_pred CCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhccc
Q 010529 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308 (508)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 308 (508)
+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+... ...++...+.++.+|+.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~----~~~~~~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHccC
Confidence 999999999988899999999999999999999988754321111 1111111 1123445677899999999999
Q ss_pred CCCCCC-----ChHHHHHH
Q 010529 309 EPRERP-----STKNLVVT 322 (508)
Q Consensus 309 ~p~~Rp-----s~~~il~~ 322 (508)
||++|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CHHHcCCCCCCCHHHHHcC
Confidence 999999 79999877
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=324.63 Aligned_cols=249 Identities=24% Similarity=0.329 Sum_probs=196.3
Q ss_pred cccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCC-----cceeeee
Q 010529 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-----ERLLVAE 146 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-----~~~lv~E 146 (508)
.-.+.+|.|+||.||+|. ..++..||||++.... +.-.+|+.+|+.++|||||++..+|.... ...||||
T Consensus 27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 335667999999999999 4557899999986443 33458999999999999999999886532 3469999
Q ss_pred cCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCccccCCC-
Q 010529 147 YMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~~~- 222 (508)
||+ .+|.+++++. .+..++...+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+....+
T Consensus 103 ymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 103 YMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 997 7899998642 3567888888889999999999999999 9999999999999955 99999999999977665
Q ss_pred --CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh--------hhc---cch----------
Q 010529 223 --KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM--------IRG---ENL---------- 278 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--------~~~---~~~---------- 278 (508)
.++..|..|+|||.+.| ..|+.+.||||.|||+.||+-|++.|+++.... +.. +.+
T Consensus 181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~ 260 (364)
T KOG0658|consen 181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEF 260 (364)
T ss_pred CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccc
Confidence 45667999999999987 568999999999999999999998888752110 000 001
Q ss_pred --hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHhh
Q 010529 279 --NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT--LARLQ 327 (508)
Q Consensus 279 --~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~~ 327 (508)
..+....+..-+....+++..+|+.++|..+|.+|.++.+++.| ...+.
T Consensus 261 ~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 261 KFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred cCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 11111111111334557889999999999999999999999988 44443
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=331.94 Aligned_cols=251 Identities=25% Similarity=0.380 Sum_probs=204.8
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-C-----CEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-R-----QWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
+.++++++.||+|+||.||+|.... + ..|++|.+...... ....|.+|+.++..++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 3467889999999999999998533 2 57999998654322 235689999999999999999999999988899
Q ss_pred eeeeecCCCCCHHHHhhccCC--------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEK--------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
+++|||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCc
Confidence 999999999999999964311 45888999999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
++|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+..... .....
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-----~~~~~ 237 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-----QEVIE 237 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 999999998754332 22345678999999988889999999999999999998 8777643211 11122
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+........+...+.++.+|+.+||..||.+|||+.+|+++|+.
T Consensus 238 ~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 238 MIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 222222233455667889999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=348.86 Aligned_cols=251 Identities=20% Similarity=0.252 Sum_probs=217.1
Q ss_pred cccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 73 NIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|-+.||.|.||+|++|+++. ...||||.++..... ...+|+.|+.||.+++||||+++.|+........||+||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 456688999999999999643 457999999865433 356899999999999999999999999988899999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-cc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YS 226 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~ 226 (508)
|++|+|+.||+.+ .+.+++.+...++..|+.||.||-+.+ +|||||-..||||+.+..+|++|||+++...+... ..
T Consensus 712 MENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y 789 (996)
T KOG0196|consen 712 MENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 789 (996)
T ss_pred hhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence 9999999999874 466999999999999999999999999 99999999999999999999999999997765531 11
Q ss_pred ----c--CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 227 ----T--NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 227 ----~--t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
| ...|.|||.+...+++..+||||||||+||.++ |.+|+|+. ...++-..+....+-+.|.+++..+.
T Consensus 790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm-----SNQdVIkaIe~gyRLPpPmDCP~aL~ 864 (996)
T KOG0196|consen 790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-----SNQDVIKAIEQGYRLPPPMDCPAALY 864 (996)
T ss_pred cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc-----chHHHHHHHHhccCCCCCCCCcHHHH
Confidence 1 267999999999999999999999999999766 77887763 33444455555666667889999999
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
+||..||++|..+||+|.+|+..|.++..+.
T Consensus 865 qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999987653
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=326.91 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=206.3
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.++|+++++||.|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 45678999999999999999998888889999986533 23568999999999999999999999999889999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----- 223 (508)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 9999999997555567899999999999999999999999 9999999999999999999999999997654332
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...++..|+|||++.+..++.++||||||+++|+|+| |..|+....... ....+......+.....+.++.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li 237 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-----VMSALQRGYRMPRMENCPDELYDIM 237 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2234567999999988889999999999999999999 776654322111 1111111111122234567799999
Q ss_pred HHhcccCCCCCCChHHHHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+||..+|++|||+.++.+.|+.
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=341.17 Aligned_cols=250 Identities=16% Similarity=0.166 Sum_probs=203.8
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|.+++.||.|+||.||+|+.. +++.||||++..... .....+..|+.++..++||||+++++++...+..|||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5788999999999999999964 588999999975421 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-CCcc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-GKSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~-~~~~ 225 (508)
|++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... ....
T Consensus 82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999996 3457899999999999999999999999 99999999999999999999999999876544 2445
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc--cchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG--ENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
.||+.|+|||++.+..++.++|||||||++|||++|..|+.......... ......+............+.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 78999999999998899999999999999999999998865432111000 0000001110000011234678999999
Q ss_pred HhcccCCCCCCChHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L 323 (508)
+||..+|.+|||+.+++.+-
T Consensus 239 ~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred HHhhChhhhcCCHHHHHhCc
Confidence 99999999999999999884
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=334.35 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=196.9
Q ss_pred CcccccccCCCCcccEEEEEEEcC-----------------CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN-----------------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANL 131 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~ 131 (508)
.+|.+.++||+|+||.||+|.+.+ +..||||.+...... ....|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788999999999999998532 336999998764322 24579999999999999999999
Q ss_pred eeeeeeCCcceeeeecCCCCCHHHHhhccC-----------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeec
Q 010529 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWE-----------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194 (508)
Q Consensus 132 ~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~D 194 (508)
++++...+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+|||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~d 163 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRD 163 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccC
Confidence 999999899999999999999999885321 124788899999999999999999999 99999
Q ss_pred CCCcceeeCCCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCC--CCCC
Q 010529 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK--HIPP 266 (508)
Q Consensus 195 ikp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~--~~~~ 266 (508)
|||+|||++.++.+||+|||++....... ...++..|+|||++.++.++.++||||||+++|+|+++. .|+.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999999987654332 223467899999998888999999999999999999753 3332
Q ss_pred chhhhhhhccchhhhhcc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 267 SHALDMIRGENLNLLMDS---HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
........ ......... ......+..++..+.+|+.+||..+|.+|||+.+|.+.|+
T Consensus 244 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 244 ELTDEQVI-ENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCHHHHH-HHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 21110000 001011110 0111123345678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=319.19 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=202.8
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEec--CCCCCChhHHHHHHHHhccCCCCCCcceeeeeee-----CCccee
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFT--KVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA-----GDERLL 143 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-----~~~~~l 143 (508)
|..++.||.|+||.|..+. ..+|..||||++. -....+.++-.+|+++|+.++|+||+.+++++.. -...|+
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi 103 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL 103 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence 3447889999999999999 5678999999997 3344456789999999999999999999999865 246799
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC--
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-- 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~-- 221 (508)
|+|+| +.+|.+.++ .+..++...+..++.|+++||.|+|+.+ |+|||+||+|+|++.+..+||||||+|+....
T Consensus 104 V~elM-etDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 104 VFELM-ETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred ehhHH-hhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccC
Confidence 99999 588999996 4555999999999999999999999999 99999999999999999999999999997743
Q ss_pred --C--CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhh-------------------hhhhccc
Q 010529 222 --G--KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHAL-------------------DMIRGEN 277 (508)
Q Consensus 222 --~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-------------------~~~~~~~ 277 (508)
+ +.++.|.+|.|||++.. ..|+...||||.||++.||++|++.|++... ..+....
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 1 45678999999999764 6799999999999999999999988876410 0011111
Q ss_pred hhhhhcccc-CCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHhhc
Q 010529 278 LNLLMDSHL-EGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVT--LARLQT 328 (508)
Q Consensus 278 ~~~~~~~~~-~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~~~ 328 (508)
....+.... .+..+ +...+...+|+.+||..||.+|+|++|+++| |.....
T Consensus 260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd 318 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD 318 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence 111111110 01111 2346788999999999999999999999998 555554
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=342.17 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=203.5
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC--CCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN--RQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
.+.+|.+++.||.|+||.||+|...+ +..||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 45678889999999999999998543 3689999986432 223456889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++|+|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 9999999999999996 3457899999999999999999999999 999999999999999999999999998765433
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....||+.|+|||++.+..++.++|||||||++|||++|..|+........ ...+.... ..++...+..+.++
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~~~~~~~l 258 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI----YQKILEGI--IYFPKFLDNNCKHL 258 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH----HHHHhcCC--CCCCCCCCHHHHHH
Confidence 345789999999999888899999999999999999999988754321110 11111111 12234456678999
Q ss_pred HHHhcccCCCCCC-----ChHHHHHHH
Q 010529 302 ASQCLQYEPRERP-----STKNLVVTL 323 (508)
Q Consensus 302 ~~~cl~~~p~~Rp-----s~~~il~~L 323 (508)
+.+||+.||.+|+ ++.++++|-
T Consensus 259 i~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 259 MKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred HHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 9999999999995 888888773
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=302.28 Aligned_cols=258 Identities=19% Similarity=0.211 Sum_probs=212.7
Q ss_pred cCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCC-----c
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-----E 140 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-----~ 140 (508)
.|-++|++.+.||.|||+-||+++ ..++..+|+|++......+.+..++|++..++++||||+++++++..+. .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 355689999999999999999999 7788999999998887777889999999999999999999999876543 4
Q ss_pred ceeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 141 RLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
.||+++|...|||.+.+... ++..+++.+++.|+.+|++||.+||+.. ++.||||||.|||+.+.+.++|.|||.+.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999999999999988654 4457999999999999999999999986 58999999999999999999999999886
Q ss_pred ccCCC-------------CccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhh
Q 010529 218 NSMDG-------------KSYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281 (508)
Q Consensus 218 ~~~~~-------------~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~ 281 (508)
...-. .....|..|+|||.+. +...+.++|||||||+||+|+.|..||.... ..+..+...
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---~~GgSlaLA 254 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---QQGGSLALA 254 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---hcCCeEEEe
Confidence 44321 1224588999999986 3457889999999999999999998864322 133333322
Q ss_pred hcc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 282 MDS-HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 282 ~~~-~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+.. ...-+.....++.+.+++.+||+.||.+||++.+++.++..+.
T Consensus 255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 222 2222223347889999999999999999999999999988764
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=361.95 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=209.6
Q ss_pred cccccccCCCCcccEEEEEEEcC--CC----EEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLEN--RQ----WIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.-.++..||+|+||.||.|...+ +. .||||.++.... ....+|++|..+|+.++|||||+++|+|.+.+..+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34567789999999999999543 43 389999976643 345689999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccC-----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 144 VAEYMPNDTLAKHLFHWE-----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
++|||+||+|..+|++.. ...++..+.+.++.|||+|+.||++++ +|||||-..|+||+....+||+|||+|+.
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHh
Confidence 999999999999998641 456899999999999999999999999 99999999999999999999999999995
Q ss_pred cCCCCcc------ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhh-hhccccCCCCC
Q 010529 219 SMDGKSY------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL-LMDSHLEGKFS 291 (508)
Q Consensus 219 ~~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 291 (508)
......+ .-...|||||.+..+.++.++|||||||+|||++|...+|+.... ...+.. ++... +-+.|
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~----n~~v~~~~~~gg-RL~~P 926 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS----NFEVLLDVLEGG-RLDPP 926 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc----hHHHHHHHHhCC-ccCCC
Confidence 5544322 123679999999999999999999999999999997666554321 111112 22222 33456
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
..++..+.++|..||+.+|++||+|..|++.+..+...
T Consensus 927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 77888999999999999999999999999998887654
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=323.30 Aligned_cols=247 Identities=21% Similarity=0.328 Sum_probs=200.4
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+++.+++.||+|+||.||++.+.++..+|+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 35677889999999999999998888789999886443 33568999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----- 223 (508)
++++|.+++.. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||.+.......
T Consensus 82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 82 ENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 99999998864 2346899999999999999999999999 9999999999999999999999999887543322
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...++..|+|||++.+..++.++||||||+++|+|++ |+.|+...... .....+.. ......+...+..+.+++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~----~~~~~i~~-~~~~~~~~~~~~~~~~li 234 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY----EVVEMISR-GFRLYRPKLASMTVYEVM 234 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHC-CCCCCCCCCCCHHHHHHH
Confidence 1223567999999988889999999999999999999 77665332110 00111111 111112333456789999
Q ss_pred HHhcccCCCCCCChHHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L 323 (508)
.+||..+|.+|||+.++++.|
T Consensus 235 ~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 235 YSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHccCCcccCcCHHHHHHhh
Confidence 999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=324.41 Aligned_cols=250 Identities=21% Similarity=0.322 Sum_probs=206.0
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.++.+.+.||.|+||.||+|... .++.||+|.+.... .....+.+|+++++.++||||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35677788999999999999954 58889999986432 33567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS---- 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 224 (508)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 9999999997555567899999999999999999999999 99999999999999999999999999876544321
Q ss_pred -cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 225 -YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 225 -~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
..++..|+|||.+.+..++.++||||||+++|||++ |..|++...... ....+........+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li 238 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKGYRMERPEGCPPKVYELM 238 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 123467999999988889999999999999999998 776654322111 1111122222334445678899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHh
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+||..+|++|||+.++++.|+.+
T Consensus 239 ~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHccCCcccCCCHHHHHHHHHhh
Confidence 999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=319.47 Aligned_cols=251 Identities=20% Similarity=0.202 Sum_probs=211.7
Q ss_pred cCCCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
-+++.+++++.||.|.-|+||+++..+ +..+|+|++.+.... ...+...|-+||+.++||.++.+|+.+..+...|
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence 456678889999999999999999655 689999999765433 2446788999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC--
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM-- 220 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~-- 220 (508)
||||||+||+|..+++...+..+++..+.-++..|+-||+|||-.| ||+|||||+||||.++|++.|+||.++....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999998888889999999999999999999999999 9999999999999999999999999853110
Q ss_pred --------------------------------C--------------------------CCccccCCCCCCccccccCCc
Q 010529 221 --------------------------------D--------------------------GKSYSTNLAYTPPEYLKNGRV 242 (508)
Q Consensus 221 --------------------------------~--------------------------~~~~~~t~~y~aPE~~~~~~~ 242 (508)
. ..+++||-.|+|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 012357888999999999999
Q ss_pred CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----hHH
Q 010529 243 IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS----TKN 318 (508)
Q Consensus 243 ~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps----~~~ 318 (508)
+...|.|+|||++|||+.|..||.+... .+.+..++...+.-+..+..+..+.+||.++|.+||.+|.. +.|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~----~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e 388 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNN----KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE 388 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCc----hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence 9999999999999999999999765422 22333444443333333466788999999999999999987 888
Q ss_pred HHHH
Q 010529 319 LVVT 322 (508)
Q Consensus 319 il~~ 322 (508)
|-+|
T Consensus 389 IK~H 392 (459)
T KOG0610|consen 389 IKRH 392 (459)
T ss_pred hhcC
Confidence 8877
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=326.05 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=208.6
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+|.+++.||.|+||.||+|...++..+++|.+..........+..|+.+++.++||||+++++++......++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 46788999999999999999877888999999876654567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----ccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~ 226 (508)
++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.+....... ...
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 99999997655667999999999999999999999999 9999999999999999999999999987554321 223
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
++..|++||.+.+..++.++||||||+++|+|++ |+.|+..... ......+ ........+...+..+.+++.+|
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN----HEVYDQI-TAGYRMPCPAKCPQEIYKIMLEC 240 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH----HHHHHHH-HhCCcCCCCCCCCHHHHHHHHHH
Confidence 4567999999988889999999999999999999 6666533211 1111111 12222233445677899999999
Q ss_pred cccCCCCCCChHHHHHHHHHh
Q 010529 306 LQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 306 l~~~p~~Rps~~~il~~L~~~ 326 (508)
|..||.+|||+.++++.|+.+
T Consensus 241 l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 241 WAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=335.80 Aligned_cols=236 Identities=17% Similarity=0.215 Sum_probs=194.4
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||+|+||.||+|+. .+++.||+|++.... ......+.+|+.++.+++||||+++++++...+..++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 458899999986432 22345688999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNL 229 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~ 229 (508)
.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 81 ~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 99986 3457899999999999999999999999 999999999999999999999999998753322 2346899
Q ss_pred CCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccC
Q 010529 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYE 309 (508)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 309 (508)
.|+|||++.+..++.++|||||||++|+|+||+.||........ ...+... ...++...+..+.+++.+||..|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM----YRKILQE--PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH----HHHHHcC--CCCCCCcCCHHHHHHHHHHcCCC
Confidence 99999999988899999999999999999999988654321111 1111111 11234456778999999999999
Q ss_pred CCCCCC---hHHHHHH
Q 010529 310 PRERPS---TKNLVVT 322 (508)
Q Consensus 310 p~~Rps---~~~il~~ 322 (508)
|.+||+ +.+++.|
T Consensus 232 p~~R~~~~~~~e~l~h 247 (312)
T cd05585 232 PTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCHHHHHcC
Confidence 999975 5666655
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=337.25 Aligned_cols=238 Identities=21% Similarity=0.270 Sum_probs=196.9
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.||+|+||.||++.. .+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 579999999999994 5689999999975422 234578899999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccC
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTN 228 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t 228 (508)
|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 998886 3457899999999999999999999999 999999999999999999999999998753221 234689
Q ss_pred CCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhccc
Q 010529 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308 (508)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 308 (508)
+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...+... ...++...+.++.+|+.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~----~~~~~~~--~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILME--DIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH----HHHhccC--CccCCCCCCHHHHHHHHHHcCC
Confidence 999999999988899999999999999999999988654221110 1111111 1123445567899999999999
Q ss_pred CCCCCC-----ChHHHHHHH
Q 010529 309 EPRERP-----STKNLVVTL 323 (508)
Q Consensus 309 ~p~~Rp-----s~~~il~~L 323 (508)
||.+|| ++.++++|-
T Consensus 233 dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCC
Confidence 999997 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=317.32 Aligned_cols=243 Identities=18% Similarity=0.215 Sum_probs=207.3
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.++++||.|+||.||++. ..+|++||||.+.... +.+++..|+.+|++++.|+||++||.+.....++||||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 4578899999999999999 5679999999986554 678999999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 226 (508)
||..+.++- ...++++.++..++...++||+|||... -||||||..|||++.+|.+||+|||.+..+.+. .+..
T Consensus 113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999998864 6778999999999999999999999998 899999999999999999999999999866553 5678
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC--CCHHHHHHHHHHHHH
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEEATQVVGLASQ 304 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~ 304 (508)
||+.|||||++..-.|+.++||||||++..||..|++|+ .+.-. ...--++.....+. -|...+.++.+++..
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPY-sDIHP----MRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~ 265 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPY-SDIHP----MRAIFMIPTKPPPTFKKPEEWSSEFNDFIRS 265 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCc-ccccc----cceeEeccCCCCCCCCChHhhhhHHHHHHHH
Confidence 999999999999888999999999999999999999654 32211 11111111111222 245668899999999
Q ss_pred hcccCCCCCCChHHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L 323 (508)
||.++|++|-|+.++++|-
T Consensus 266 CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 266 CLIKKPEERKTALRLCEHT 284 (502)
T ss_pred HhcCCHHHHHHHHHHhhhh
Confidence 9999999999999999883
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=337.27 Aligned_cols=238 Identities=19% Similarity=0.265 Sum_probs=196.2
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.||+|+||.||+++. .+|..||+|++..... .....+.+|+.+++.++||||+++++++...+..||||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 579999999999994 5689999999975422 223467889999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccC
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTN 228 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t 228 (508)
|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 998886 3457899999999999999999999999 999999999999999999999999998753221 234689
Q ss_pred CCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhccc
Q 010529 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308 (508)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 308 (508)
+.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+.... ..++...++.+.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~----~~~~~~~~--~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILMEE--IRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCC--CCCCCCCCHHHHHHHHHHccC
Confidence 999999999988999999999999999999999988643211100 11111111 123445567899999999999
Q ss_pred CCCCCC-----ChHHHHHHH
Q 010529 309 EPRERP-----STKNLVVTL 323 (508)
Q Consensus 309 ~p~~Rp-----s~~~il~~L 323 (508)
||.+|| ++.+++++-
T Consensus 233 dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCC
Confidence 999998 889988773
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=332.91 Aligned_cols=244 Identities=28% Similarity=0.452 Sum_probs=192.4
Q ss_pred ccccCCCCcccEEEEEEEc-----CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 74 IVSESGEKAANVVYKGRLE-----NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.+.||.|.||.||+|.+. .+..|+||.++..... ..+.|.+|++.+++++||||++++|+|...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4577899999999999976 2667999999653322 257899999999999999999999999988889999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----- 222 (508)
+++|+|.+++.......+++..++.|+.||++||.|||+++ ++|+||+++|||++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999998654678999999999999999999999999 999999999999999999999999998876322
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
........|+|||.+.+..++.++||||||+++|||+| |+.|+.... ...+...+........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----NEEIIEKLKQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----HHHHHHHHHTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccceeccchhHHHHH
Confidence 22335678999999988889999999999999999999 555543211 11111111222222334456778999
Q ss_pred HHHHhcccCCCCCCChHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L 323 (508)
++..||..+|.+|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=340.99 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=202.7
Q ss_pred CcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCC-ChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~ 141 (508)
+.|.+++.||.|+||.||+|+... +..||||++...... ..+.+.+|+.+++++. ||||++++++|...+..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 356788999999999999998522 346999999754322 2457999999999995 99999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccC------------------------------------------------------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 161 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~------------------------------------------------------------ 161 (508)
|||||||++|+|.+++....
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 99999999999999885421
Q ss_pred ----------------------------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 162 ----------------------------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 162 ----------------------------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~ 275 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKI 275 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCE
Confidence 124788889999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
+||+|||++....... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|++..... .....
T Consensus 276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~----~~~~~ 351 (400)
T cd05105 276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD----STFYN 351 (400)
T ss_pred EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh----HHHHH
Confidence 9999999987543321 2235678999999988889999999999999999997 77666542211 01111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+........+...+..+.+++.+||..+|++|||+.++.+.|+.+.+
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 352 KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111111222334567789999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-42 Score=335.53 Aligned_cols=253 Identities=21% Similarity=0.280 Sum_probs=201.0
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|++++.||.|+||.||++... ++..+|+|.+...... ....+.+|+++++.++||||++++++|...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 46788999999999999999965 5888999988654322 235789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Ccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSY 225 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~ 225 (508)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+.++|+||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 999999999963 4568899999999999999999998533999999999999999999999999998754332 345
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh---c-----cc--------------------
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR---G-----EN-------------------- 277 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~-----~~-------------------- 277 (508)
.++..|+|||++.+..++.++|||||||++|+|++|+.|+......... . ..
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 6889999999998888999999999999999999999886532111000 0 00
Q ss_pred --------hhhhhccccC---CCCC-HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 278 --------LNLLMDSHLE---GKFS-SEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 278 --------~~~~~~~~~~---~~~~-~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
...+.+.... ...+ ...+.++.+|+.+||+.||++|||+.+++.+-.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 0000000000 0000 123567899999999999999999999998844
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=329.76 Aligned_cols=249 Identities=18% Similarity=0.261 Sum_probs=197.8
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|.+++.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5788899999999999999964 588899999875432 2245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----- 222 (508)
+++++|..+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765443 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh--hh-----cc----chhhhhc--------
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM--IR-----GE----NLNLLMD-------- 283 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--~~-----~~----~~~~~~~-------- 283 (508)
....+++.|+|||++.+..++.++|||||||++|+|++|+.||+...... .. +. .......
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 23467899999999988889999999999999999999998775431100 00 00 0000000
Q ss_pred -cccCC------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 -SHLEG------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 -~~~~~------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.... ......+..+.+|+.+||+.||.+|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 0011246679999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=329.11 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=198.3
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..++|.+++.||.|+||.||+|+. .++..||+|+++.... .....+.+|+.+++.++||||+++++++......++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 356788999999999999999995 4688999999875432 22456889999999999999999999999888999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 83 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 83 EYLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred eCCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 9997 589988854 3446889999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhhhc----------
Q 010529 223 -KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLLMD---------- 283 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~~~---------- 283 (508)
....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||......... +......+.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 23457889999999865 56889999999999999999999877543211000 000000000
Q ss_pred ---cccCCC----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 ---SHLEGK----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ---~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+..... .....+.++.+|+.+||..||.+|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 011235678899999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=309.53 Aligned_cols=250 Identities=19% Similarity=0.184 Sum_probs=205.7
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|++.++||+|.|+.||++. .++|+.+|+|++.... ..+.+.+.+|+++-+.|+|||||++...+.+.+..|||+|+
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 46677888999999999998 5679989999886432 23567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC---CCCCeEEcccCCccccCCCC-
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD---EDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~~- 223 (508)
|.|++|..-+-. ...+++..+-..+.||+++|.|+|.++ |||||+||+|+|+. ...-+||+|||+|.....+.
T Consensus 92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 999999766642 356888889999999999999999999 99999999999994 33458999999999887553
Q ss_pred --ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 224 --SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
...|||.|||||+++..+|+..+|||+.||+||-|+.|.+||+++....+....+..-. ...++..+..+++..+|
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y--d~~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY--DYPSPEWDTVTPEAKSL 246 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc--CCCCcccCcCCHHHHHH
Confidence 45789999999999999999999999999999999999999887432222111111111 11222345567889999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.+||..||.+|.|+.|.+.|-|-
T Consensus 247 vrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred HHHHhccChhhhccHHHHhCCchh
Confidence 999999999999999999988654
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=329.97 Aligned_cols=251 Identities=20% Similarity=0.235 Sum_probs=195.7
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|.+++.||.|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++..+...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 56888999999999999999954 6889999998754322 234678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 96 678777754 3456889999999999999999999999 999999999999999999999999998643321 2
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhh--hhhh------ccchh----------hhhcc
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHAL--DMIR------GENLN----------LLMDS 284 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~~------~~~~~----------~~~~~ 284 (508)
...+++.|+|||++.+ ..++.++|||||||++|+|+||..||..... .... +.... .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 3457899999999865 4578899999999999999999988754211 0000 00000 00000
Q ss_pred ccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 285 HLEGKFSS---------EEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 285 ~~~~~~~~---------~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
......+. ..+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~ 289 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE 289 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence 00000000 1235688999999999999999999999873
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=321.21 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=204.5
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
..+++.+.||+|++|.||+|...++..||||.++... ...+++.+|+.++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 3467889999999999999998777889999987543 235679999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc--ccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS--YST 227 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~ 227 (508)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........ ..+
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence 999999997544457899999999999999999999999 99999999999999999999999999876543211 122
Q ss_pred ---CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 228 ---NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 228 ---t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
+..|+|||++.+..++.++||||||+++|+|+| |+.|+....... ....+........+...+..+.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~ 238 (261)
T cd05068 164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-----VLQQVDQGYRMPCPPGCPKELYDIML 238 (261)
T ss_pred CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 347999999988889999999999999999999 776654321110 11111111111233445678999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||..+|.+||++.++++.|+.
T Consensus 239 ~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 239 DCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=333.59 Aligned_cols=241 Identities=17% Similarity=0.269 Sum_probs=194.8
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHh---ccCCCCCCcceeeeeeeCCcceee
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGV---GKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
|++++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999999995 468899999997532 12234566676654 567899999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||++|++|..++. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998884 457999999999999999999999999 999999999999999999999999998743221
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....|++.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+... ....+...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV----FDSIVND--EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHH
Confidence 345689999999999988899999999999999999999988654321111 1111111 11233445677899
Q ss_pred HHHHhcccCCCCCC-----ChHHHHHH
Q 010529 301 LASQCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rp-----s~~~il~~ 322 (508)
++.+||..||.+|| ++.+++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 99999999999999 57777766
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-42 Score=300.09 Aligned_cols=246 Identities=20% Similarity=0.283 Sum_probs=196.7
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.++++.||.|+.|.|++++.. +|..+|||.+..... ...++++..+.++... ++|.||+++|+|..+...++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3456788999999999999954 589999999976543 3355777888877666 589999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Cc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KS 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~ 224 (508)
|. .-++.+++. -.+++++..+-++...+++||.||.+++.||||||||+|||+|+.|++||||||++..+.++ +.
T Consensus 173 Ms-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr 250 (391)
T KOG0983|consen 173 MS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR 250 (391)
T ss_pred HH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence 83 445555543 56679999999999999999999999877999999999999999999999999999877665 34
Q ss_pred cccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC--HHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS--SEEATQVV 299 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 299 (508)
..|.+.|||||.+.- ..|+.++||||||++|+||.||+-|+.....+. +.+..++++. .+.++ ...+++++
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF---e~ltkvln~e-PP~L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF---EVLTKVLNEE-PPLLPGHMGFSPDFQ 326 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH---HHHHHHHhcC-CCCCCcccCcCHHHH
Confidence 568899999999863 468899999999999999999998876532111 1111122211 11111 22678899
Q ss_pred HHHHHhcccCCCCCCChHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+|+..||++|+.+||...++++|
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcC
Confidence 99999999999999999999987
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=351.38 Aligned_cols=248 Identities=17% Similarity=0.193 Sum_probs=202.0
Q ss_pred CCcccccccCCCCcccEEEEEEE-cC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-EN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+..|.+.+.||+|++|.||+|.. .+ +..||+|.+..........+.+|+.+++.++|||||++++++..++..|||||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 33488899999999999999984 33 67788887754443334567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 147 YMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|++||+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999999887532 3456889999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
....||+.|+|||++.+..++.++|||||||++|+|+||+.|+....... ....+.... ....+...+..+
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~----~~~~~~~~~-~~~~~~~~s~~~ 299 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE----IMQQVLYGK-YDPFPCPVSSGM 299 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCC-CCCCCccCCHHH
Confidence 33468999999999988889999999999999999999998864321110 011111111 112334456789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+|+.+||..||++|||+.+++.+
T Consensus 300 ~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 300 KALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHhccChhhCcCHHHHHhC
Confidence 999999999999999999999865
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=320.81 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=200.0
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.+|.+++.||.|+||.||+|.+.++..||||.+.... .....|.+|+.++++++||||+++++++......++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4578889999999999999998777779999987543 335679999999999999999999999998888999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-----
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS----- 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~----- 224 (508)
+++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 83 NGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 99999998642 336899999999999999999999999 99999999999999999999999999875543321
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..++..|++||++.+..++.++||||||+++|+|+| |..|+........ ...+ ........+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET----VEKV-SQGLRLYRPHLASEKVYAIMY 235 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH----HHHH-hcCCCCCCCCCCCHHHHHHHH
Confidence 223567999999988889999999999999999999 7766432211100 0111 111111122334678999999
Q ss_pred HhcccCCCCCCChHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L 323 (508)
+||..+|.+|||+.+++..|
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred HHcCCCcccCCCHHHHHHhh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=330.79 Aligned_cols=252 Identities=17% Similarity=0.259 Sum_probs=201.8
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCC----EEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQ----WIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+|++++.||+|+||.||+|.+. ++. .||||+++.... ....++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 45788899999999999999853 343 389999865432 2346789999999999999999999999764 5789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
|+||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCC
Confidence 9999999999999864 3446889999999999999999999999 9999999999999999999999999998654332
Q ss_pred c------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 S------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ~------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
. ..++..|+|||++.+..++.++||||||+++|||++ |..|+...... .+...+........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEKGERLPQPPICTI 238 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHhCCCCCCCCCCCCH
Confidence 1 123567999999988899999999999999999998 77665432111 11112222222222334556
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
++.+++.+||..+|.+|||+.+++..|..+...
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 789999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=312.68 Aligned_cols=252 Identities=21% Similarity=0.243 Sum_probs=200.3
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCC-CcceeeeeeeCC-----
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKR-LANLIGYCCAGD----- 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-Iv~~~~~~~~~~----- 139 (508)
...|..+++||+|+||+||+|+ ..+|+.||+|+++..... ......+|+.+|+.|+|+| ||++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3446677889999999999999 667999999999765432 3456789999999999999 999999998776
Q ss_pred -cceeeeecCCCCCHHHHhhccCC--CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 140 -ERLLVAEYMPNDTLAKHLFHWEK--QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 140 -~~~lv~E~~~~~sL~~~l~~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
.++|||||+. .+|..++..... ..++...+..++.||+.||+|||+++ |+||||||.||||+.+|.+||+|||+|
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchH
Confidence 7899999996 789999965432 46777899999999999999999999 999999999999999999999999999
Q ss_pred cccCCC----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----------hccchhh
Q 010529 217 KNSMDG----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----------RGENLNL 280 (508)
Q Consensus 217 ~~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----------~~~~~~~ 280 (508)
+...-. +..++|..|+|||++.+. .|+...||||+||++.||++++..|++...... ....+..
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 865522 345689999999999886 689999999999999999999988876522100 0011111
Q ss_pred hh---ccc--cC-CCCC-------HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 281 LM---DSH--LE-GKFS-------SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 281 ~~---~~~--~~-~~~~-------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+. +-. .. ...+ +.......+++.+||+.+|.+|.|+..++.|
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00 000 00 0001 1112478899999999999999999999988
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=341.80 Aligned_cols=246 Identities=17% Similarity=0.164 Sum_probs=196.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.|.+++.||+|+||+||+|+. .+++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577899999999999999994 5688999999965432 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----- 221 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----- 221 (508)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999986 3456899999999999999999999999 99999999999999999999999998753210
Q ss_pred ----------------------------------------------CCccccCCCCCCccccccCCcCccccchhhHHHH
Q 010529 222 ----------------------------------------------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVL 255 (508)
Q Consensus 222 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl 255 (508)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0134689999999999888899999999999999
Q ss_pred HHHHhCCCCCCchhhhhhhccchhhhhc--cccCCCCCHHHHHHHHHHHHH--hcccCCCCCCChHHHHHHH
Q 010529 256 LDLLSGKHIPPSHALDMIRGENLNLLMD--SHLEGKFSSEEATQVVGLASQ--CLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 256 ~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~--cl~~~p~~Rps~~~il~~L 323 (508)
|||+||..||........ ...+.. .....+.....+.++.+|+.+ |+..+|..||++.+++.|-
T Consensus 239 ~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp 306 (381)
T cd05626 239 FEMLVGQPPFLAPTPTET----QLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHP 306 (381)
T ss_pred HHHHhCCCCCcCCCHHHH----HHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence 999999988754321110 011111 111111122346778889988 5556666799999999883
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=325.92 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=201.4
Q ss_pred CCcccccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
++++++.+.||+|+||.||+|.+ .++..|++|.+...... ....+.+|+.+++.++||||+++++++..+...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 56778889999999999999984 24578999999753322 2357889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC---------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWE---------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+|||++.++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999985221 235788999999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
+||+|||++...... ....++..|+|||++.+..++.++||||||+++|||++ |..|+..... ..+..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-----~~~~~ 237 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-----QEVIE 237 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 999999998755332 22334567999999988889999999999999999999 7766543211 11111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+........+...+..+.+++.+||..||.+||++.+|+++|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111122334456789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=337.02 Aligned_cols=245 Identities=16% Similarity=0.114 Sum_probs=194.4
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|++++.||+|+||+||+|.. .+++.||||++..... .....+.+|+.++..++||||+++++.+.+....|||||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 577889999999999999994 4688999999965321 223468889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++||+|.+++. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999996 3467999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCc
Q 010529 223 -----------------------------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPS 267 (508)
Q Consensus 223 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 267 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 134689999999999988999999999999999999999988754
Q ss_pred hhhhhhhccchhhhhc--cccCCCCCHHHHHHHHHHHHHhcc--cCCCCCCChHHHHHH
Q 010529 268 HALDMIRGENLNLLMD--SHLEGKFSSEEATQVVGLASQCLQ--YEPRERPSTKNLVVT 322 (508)
Q Consensus 268 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~--~~p~~Rps~~~il~~ 322 (508)
...... ...+.. ..+..+.....+.++.+++.+++. .++..||++.+|++|
T Consensus 239 ~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQET----YKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHH----HHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 321110 111111 001000011235667788887553 234456899999988
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=341.01 Aligned_cols=245 Identities=22% Similarity=0.234 Sum_probs=202.2
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|.+++.||.|+||.||+|+.. +++.||||++..... .....+..|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 5788899999999999999954 689999999975321 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999964 367999999999999999999999999 9999999999999999999999999987544322
Q ss_pred ------------------------------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh
Q 010529 224 ------------------------------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI 273 (508)
Q Consensus 224 ------------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~ 273 (508)
...||+.|+|||++.+..++.++|||||||++|+|++|+.|+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~- 237 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE- 237 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH-
Confidence 3458899999999999999999999999999999999998865432111
Q ss_pred hccchhhhhc--cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-hHHHHHHH
Q 010529 274 RGENLNLLMD--SHLEGKFSSEEATQVVGLASQCLQYEPRERPS-TKNLVVTL 323 (508)
Q Consensus 274 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps-~~~il~~L 323 (508)
....+.. .....+.....++.+.+|+.+||. +|.+||+ +.+++++.
T Consensus 238 ---~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 238 ---TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred ---HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 0111111 111111111247789999999997 9999999 99999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=325.17 Aligned_cols=249 Identities=22% Similarity=0.315 Sum_probs=202.5
Q ss_pred CcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..|.+++.||+|+||.||+|...+ +..||||.+...... ..+.+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 456788999999999999998532 478999998765433 3468999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEE
Q 010529 143 LVAEYMPNDTLAKHLFHWE------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl 210 (508)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEE
Confidence 9999999999999996431 245788999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhc
Q 010529 211 SCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMD 283 (508)
Q Consensus 211 ~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 283 (508)
+|||++...... ....+++.|+|||++.+..++.++||||||+++|+|++ |..|+....... ....+.
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-----~~~~~~ 238 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-----VIECIT 238 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHH
Confidence 999998754322 22234678999999998899999999999999999999 887764321111 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 284 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.......+...+..+.+++.+||..||++|||+.++++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11112223345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=332.82 Aligned_cols=239 Identities=20% Similarity=0.285 Sum_probs=195.8
Q ss_pred cccCCCCcccEEEEEEE----cCCCEEEEEEecCCC----CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 75 VSESGEKAANVVYKGRL----ENRQWIAVKKFTKVA----WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
++.||+|+||.||+++. .+++.||||++.... ......+..|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 35789999999999984 357889999986532 1223467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc
Confidence 999999999986 3456888899999999999999999999 999999999999999999999999998743322
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.... ...+...+..+.+++
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~li 231 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK----KTIDKILKGK--LNLPPYLTPEARDLL 231 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH----HHHHHHHcCC--CCCCCCCCHHHHHHH
Confidence 2346899999999998888899999999999999999999886543211 1111111111 123444567899999
Q ss_pred HHhcccCCCCCC-----ChHHHHHH
Q 010529 303 SQCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 303 ~~cl~~~p~~Rp-----s~~~il~~ 322 (508)
.+||..+|++|| ++.+++.+
T Consensus 232 ~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 232 KKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHcccCHhHcCCCCCCCHHHHhcC
Confidence 999999999999 78888876
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=345.62 Aligned_cols=252 Identities=18% Similarity=0.171 Sum_probs=208.6
Q ss_pred CcccccccCCCCcccEEEEEEEcCC-CEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeee-ee---C---Cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENR-QWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYC-CA---G---DE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~-~~---~---~~ 140 (508)
....+.+.|.+|||+.||+|....+ ..||+|++-..+....+.+.+|+++|++| .|+|||.+++.. .. . -+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3467888999999999999996554 88999998777666678899999999999 599999999932 21 1 24
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
++|.||||.||+|-+++.......|++.++++|+.|+++|+.+||... +|||||||-+||||..+|..||||||.+...
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 689999999999999997666667999999999999999999999987 7999999999999999999999999988643
Q ss_pred CCCC-------------ccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc
Q 010529 220 MDGK-------------SYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283 (508)
Q Consensus 220 ~~~~-------------~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~ 283 (508)
.... ...+|+.|++||++. +...++|+|||+|||+||-|+....||... ....++.
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s--------g~laIln 268 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES--------GKLAILN 268 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC--------cceeEEe
Confidence 3221 123689999999874 678899999999999999999999886432 1222233
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 284 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
....-+..+.++..+.+||..||+.||.+||++-+++..+..+...
T Consensus 269 g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 269 GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 3233233357899999999999999999999999999999888654
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=341.61 Aligned_cols=245 Identities=17% Similarity=0.149 Sum_probs=198.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|.+++.||.|+||.||+|+. .+++.||||++.... ......+.+|+.++..++||||+++++++.++...+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 578889999999999999995 468899999997532 1223467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999863 456999999999999999999999999 999999999999999999999999998643211
Q ss_pred --------------------------------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCC
Q 010529 223 --------------------------------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHI 264 (508)
Q Consensus 223 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~ 264 (508)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 123589999999999888899999999999999999999988
Q ss_pred CCchhhhhhhccchhhhhc--cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---hHHHHHHH
Q 010529 265 PPSHALDMIRGENLNLLMD--SHLEGKFSSEEATQVVGLASQCLQYEPRERPS---TKNLVVTL 323 (508)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps---~~~il~~L 323 (508)
|....... ....+.. ..+........++.+.+++.+|+. +|.+|++ +.+++.|-
T Consensus 239 f~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 239 FCSDNPQE----TYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred CCCCCHHH----HHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 65432110 0111111 011111111346678899999996 9999987 99998873
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=332.50 Aligned_cols=253 Identities=19% Similarity=0.289 Sum_probs=200.5
Q ss_pred cccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC-Ccc
Q 010529 71 SDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG-DER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~-~~~ 141 (508)
+|++++.||.|+||.||+|... +++.||+|+++..... ..+.+.+|+.++.++ +|+||++++++|... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 5788999999999999999732 2468999998754322 234678899999999 899999999988654 567
Q ss_pred eeeeecCCCCCHHHHhhccC-----------------------------------------------------------C
Q 010529 142 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------K 162 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~-----------------------------------------------------------~ 162 (508)
++||||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885321 1
Q ss_pred CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------CccccCCCCCCccc
Q 010529 163 QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEY 236 (508)
Q Consensus 163 ~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~ 236 (508)
..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 26889999999999999999999999 999999999999999999999999999865332 12334678999999
Q ss_pred cccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010529 237 LKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS 315 (508)
Q Consensus 237 ~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps 315 (508)
+.+..++.++|||||||++|||++ |..|+...... ......+........+...+.++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID----EEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc----HHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 87665431110 0111111111122223345677999999999999999999
Q ss_pred hHHHHHHHHHhhc
Q 010529 316 TKNLVVTLARLQT 328 (508)
Q Consensus 316 ~~~il~~L~~~~~ 328 (508)
+.+++++|..+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=325.75 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=193.0
Q ss_pred cccccccCCCCcccEEEEEEE-c-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccC---CCCCCcceeeeeee-----C
Q 010529 71 SDNIVSESGEKAANVVYKGRL-E-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKL---RRKRLANLIGYCCA-----G 138 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~nIv~~~~~~~~-----~ 138 (508)
+|++++.||+|+||.||+|+. . +++.||||++....... ...+.+|+.+++.+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 578889999999999999985 3 46889999986543222 34567788777665 69999999999852 3
Q ss_pred CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
...++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999996 68999887555567899999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-----------chh-----
Q 010529 219 SMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-----------NLN----- 279 (508)
Q Consensus 219 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-----------~~~----- 279 (508)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|++|+........... ...
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 334678999999999888899999999999999999999977654311000000 000
Q ss_pred --hhhccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 280 --LLMDSHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 280 --~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+...... ......+..+.+|+.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000000000 0011245678899999999999999999999965
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=331.67 Aligned_cols=257 Identities=19% Similarity=0.290 Sum_probs=220.3
Q ss_pred cccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 73 NIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.+-.+||.|.||.||.|.|+. ...||||.++... -..++|+.|+.+|+.+.|||+|+++|+|..+..+|||+|||..|
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG 348 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG 348 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence 345788999999999999876 6779999997554 34679999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc--ccc--
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS--YST-- 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~-- 227 (508)
+|.++|+++....++.-..+.++.||..||+||..++ +|||||-..|+||..+..+||+|||+++.....+. ..|
T Consensus 349 NLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK 427 (1157)
T KOG4278|consen 349 NLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK 427 (1157)
T ss_pred cHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc
Confidence 9999999888888999999999999999999999999 99999999999999999999999999997765532 233
Q ss_pred -CCCCCCccccccCCcCccccchhhHHHHHHHHhC-CCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 228 -NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG-KHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 228 -t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
.+-|.|||-+....++.|+|||+|||+|||+.|- ..|+++- .-..+-.++....+-.-|..|++.+.+||..|
T Consensus 428 FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSqVY~LLEkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 428 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYGLLEKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred CcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHHHHHHHhccccccCCCCCCHHHHHHHHHH
Confidence 4569999999989999999999999999999984 4455442 22233445555556566778899999999999
Q ss_pred cccCCCCCCChHHHHHHHHHhhcCCCCCccc
Q 010529 306 LQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336 (508)
Q Consensus 306 l~~~p~~Rps~~~il~~L~~~~~~~~~~~~~ 336 (508)
|.++|.+||++.|+-+.++.+.....+...+
T Consensus 503 W~WsPsDRPsFaeiHqafEtmf~~sSisdEV 533 (1157)
T KOG4278|consen 503 WNWSPSDRPSFAEIHQAFETMFSSSSISDEV 533 (1157)
T ss_pred hcCCcccCccHHHHHHHHHHHhccccccHHH
Confidence 9999999999999999999987665554333
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=339.93 Aligned_cols=250 Identities=20% Similarity=0.185 Sum_probs=202.4
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
....+|.+++.||+|+||.||+++. .++..||||++.... ......+.+|+.+++.++||||+++++++.++...+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 4456788999999999999999995 468899999986432 123345789999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999884 346888999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CccccCCCCCCccccccC----CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC--
Q 010529 223 -----KSYSTNLAYTPPEYLKNG----RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-- 291 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 291 (508)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .....+........++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~ 271 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMDHKNSLTFPDD 271 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HHHHHHHcCCCcCCCCCc
Confidence 234689999999998643 4788999999999999999999887543211 1111222111111112
Q ss_pred HHHHHHHHHHHHHhcccCCCC--CCChHHHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRE--RPSTKNLVVTLA 324 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~--Rps~~~il~~L~ 324 (508)
...+..+.+|+.+||..+|.+ |+|+.+++.|-+
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 235678999999999999988 999999998843
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=318.79 Aligned_cols=248 Identities=21% Similarity=0.309 Sum_probs=203.6
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
..|+++++||.|+||.||+|..++++.||+|.+.... .....+.+|+.+++.++|+||+++++++ ..+..++||||+.
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence 4578899999999999999998888899999987544 3456899999999999999999999987 4567899999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----c
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----S 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~ 224 (508)
+++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 999999987555567899999999999999999999999 9999999999999999999999999987654221 2
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..++..|+|||++.+..++.++||||||+++|+|++ |+.|+...... .....+........+...+.++.+++.
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNLERGYRMPRPDNCPEELYELMR 237 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 234567999999988889999999999999999999 88765432111 011111111122233445678999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||..+|++|||+++++..|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 238 LCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-41 Score=318.07 Aligned_cols=254 Identities=16% Similarity=0.198 Sum_probs=206.5
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|.+.+.||.|+||.||+|+. .+++.||||.+....... ...+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4678889999999999999994 568899999886533222 346889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 146 EYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||+++++|.+++... ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999888532 2345889999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCCCCHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQV 298 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 298 (508)
....+++.|+|||.+.+..++.++||||||+++|+|++|+.|+.....+.. .....+... .........+..+
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF---SLCQKIEQCDYPPLPTEHYSEKL 237 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH---HHHHHHhcCCCCCCChhhcCHHH
Confidence 234578899999999888889999999999999999999988654321110 111111111 1111233456789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+++.+||..+|++|||+.++++.|+.+.
T Consensus 238 ~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 238 RELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 99999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=324.68 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=205.1
Q ss_pred CCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
+.+|.+.+.||+|+||.||+|... ++..+++|.+........+.+.+|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 345677889999999999999842 34568899886554444567999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCe
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~ 208 (508)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcE
Confidence 9999999999999986421 234889999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhh
Q 010529 209 RLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLL 281 (508)
Q Consensus 209 kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~ 281 (508)
+|+|||++...... ....++..|+|||++.+..++.++||||||+++|+|+| |..|+....... ....
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~ 237 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-----VIEC 237 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHH
Confidence 99999998754332 22335678999999988889999999999999999999 776653321110 0011
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+........+...+..+.+++.+||..+|.+|||+.++++.|..+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 ITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111111122334567799999999999999999999999999999653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=324.68 Aligned_cols=242 Identities=18% Similarity=0.229 Sum_probs=194.7
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||+|+||+||++.. .+++.||||++...... ..+.+..|+.+++.++||||+++.+++......++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999995 46889999998654322 224678899999999999999999999998999999999999999
Q ss_pred HHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccccc
Q 010529 154 AKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYST 227 (508)
Q Consensus 154 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 227 (508)
..++... ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 8877432 3456899999999999999999999999 999999999999999999999999998755433 23468
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++||||||+++|+|++|+.|+.................... ...+...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--VTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--CCCcccCCHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999988653211100000011111111 12234567789999999999
Q ss_pred cCCCCCC-----ChHHHHHH
Q 010529 308 YEPRERP-----STKNLVVT 322 (508)
Q Consensus 308 ~~p~~Rp-----s~~~il~~ 322 (508)
.||++|| |+.+++.|
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcC
Confidence 9999999 67888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=325.69 Aligned_cols=248 Identities=19% Similarity=0.214 Sum_probs=201.7
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|++++.||+|+||.||++.. .+++.||||++...... ....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 56778899999999999995 46889999998653322 234578899999999999999999999988999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Cc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KS 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~ 224 (508)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544457999999999999999999999999 999999999999999999999999998765433 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..|++.|+|||++.+..++.++||||||+++|+|++|+.|+......... ..+...+.. .....+...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKE-DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhh-cccccCcccCHHHHHHHHH
Confidence 46789999999998888999999999999999999999886542111000 011111111 1122344567789999999
Q ss_pred hcccCCCCCC-----ChHHHHHH
Q 010529 305 CLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rp-----s~~~il~~ 322 (508)
||..||.+|| ++.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 78888877
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=318.78 Aligned_cols=250 Identities=21% Similarity=0.267 Sum_probs=202.2
Q ss_pred CcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+|.+.+.||+|+||.||+|.+.. ...||||.+...... ....|.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 346778889999999999999642 457999998654322 245789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
|||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 84 TEYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 999999999999864 3347899999999999999999999999 9999999999999999999999999988664211
Q ss_pred -----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 224 -----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+....... ....+........+...+..
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-----VIKAVEDGYRLPPPMDCPSA 236 (266)
T ss_pred ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHH
Confidence 1223567999999988889999999999999999998 876654321111 11111111111223445678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+.+++.+||+.+|++||++.+++++|..+
T Consensus 237 l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 237 LYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=325.67 Aligned_cols=253 Identities=21% Similarity=0.253 Sum_probs=210.1
Q ss_pred ccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 72 DNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
..+.++||+|-||.|.++...++..||||+++.....+ ...|.+|+++|.+|+|||||+++|+|..++.+++|+||+++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 35578999999999999999898999999999876655 47899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccc----
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS---- 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---- 226 (508)
|+|.+++.......+......+|+.||+.||+||.+.+ +|||||.+.|+|+|.++++||+|||+++.+..+..+.
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 99999997654444566778889999999999999999 9999999999999999999999999999777665443
Q ss_pred --cCCCCCCccccccCCcCccccchhhHHHHHHHHh--CCCCCCchhhhhhhccchhhhhccccC---CCCCHHHHHHHH
Q 010529 227 --TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS--GKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEATQVV 299 (508)
Q Consensus 227 --~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 299 (508)
-...|||||.+.-++++.++|||+||+++||+++ ...|+.+... ....+....+++..-. ...|.-++..+.
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-e~vven~~~~~~~~~~~~~l~~P~~cp~~ly 777 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-EQVVENAGEFFRDQGRQVVLSRPPACPQGLY 777 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-HHHHHhhhhhcCCCCcceeccCCCcCcHHHH
Confidence 3588999999999999999999999999999865 4555443221 1112222222222111 123455678899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
++|.+||..+..+|||++++..+|...
T Consensus 778 elml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 778 ELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999999998764
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=317.59 Aligned_cols=246 Identities=26% Similarity=0.357 Sum_probs=199.8
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.++.+.+.||+|+||.||+|.+.++..+|+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 3567888999999999999998777789999986443 234578999999999999999999999998899999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcc----
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY---- 225 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---- 225 (508)
|++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 83 NGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 9999999864 2347899999999999999999999999 999999999999999999999999998765433211
Q ss_pred -ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 226 -STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 226 -~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
.++..|+|||.+.+..++.++||||||+++|+|+| |..|+...... .....+........+...+..+.+++.
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVESVSAGYRLYRPKLAPTEVYTIMY 235 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 12347999999988889999999999999999999 56554321110 001111111122233446778999999
Q ss_pred HhcccCCCCCCChHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L 323 (508)
+||..+|++|||+.++++.|
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHhcCChhhCcCHHHHHHHh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=334.87 Aligned_cols=247 Identities=19% Similarity=0.182 Sum_probs=196.8
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
-..|.+++.||.|+||.||+|.. .+++.||+|... ...+.+|+.++++++||||+++++++......++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 45689999999999999999994 568899999753 24578999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----- 222 (508)
+. ++|..++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 165 ~~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 165 YK-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred CC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 95 78888885 3456899999999999999999999999 999999999999999999999999998643221
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh------------hhhh--c-----------cc
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL------------DMIR--G-----------EN 277 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~------------~~~~--~-----------~~ 277 (508)
....||+.|+|||++.+..++.++|||||||++|||+||..|+..... .... + ..
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 234689999999999888899999999999999999999977543210 0000 0 00
Q ss_pred hhhhh----ccccC--CCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 278 LNLLM----DSHLE--GKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 278 ~~~~~----~~~~~--~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
..... ..... ... ....+.++.+|+.+||+.||.+|||+.+++++-+-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f 379 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF 379 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence 00000 00000 000 01346688999999999999999999999987543
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=334.64 Aligned_cols=238 Identities=20% Similarity=0.275 Sum_probs=195.4
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.||+|+||.||++.. .++..||+|++..... .....+..|++++..++||||+++++++...+..+|||||++|++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 579999999999994 5688999999975422 223567889999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccccc
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYST 227 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 227 (508)
|..++. ....+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||++...... ....|
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 998886 34578999999999999999999997 68 999999999999999999999999998743221 23468
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|+|+||+.|+........ ...+... ...++...++++.+|+.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILME--EIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH----HHHHhcC--CCCCCCCCCHHHHHHHHHHhh
Confidence 9999999999888899999999999999999999988654221110 0111111 112334456789999999999
Q ss_pred cCCCCCC-----ChHHHHHHH
Q 010529 308 YEPRERP-----STKNLVVTL 323 (508)
Q Consensus 308 ~~p~~Rp-----s~~~il~~L 323 (508)
.||.+|+ ++.++++|-
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCC
Confidence 9999996 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=317.44 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=202.5
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
++|++++.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 35788899999999999999988888899999875443 3567999999999999999999999874 556899999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----c
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----S 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~ 224 (508)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 999999997544556899999999999999999999999 9999999999999999999999999987554321 1
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+..... ......+........+...+..+.+|+.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----REVLEQVERGYRMPCPQDCPISLHELML 237 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 223457999999988889999999999999999999 6665543211 0111111111222334455678999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||..+|.+|||+.++.+.|+.
T Consensus 238 ~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 238 QCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=334.10 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=193.5
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~~ 142 (508)
+|++.+.||+|+||.||+|+. .++..||||++.... ......+.+|+.+++.++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 367889999999999999994 568999999986432 22345688999999999999999999988643 2479
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+|||||. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999995 78998886 3456999999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-------------------hh
Q 010529 223 -------KSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-------------------IR 274 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-------------------~~ 274 (508)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||....... ..
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 23468899999999865 578899999999999999999998765421100 00
Q ss_pred ccchhhhhcccc---CCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 275 GENLNLLMDSHL---EGKF---SSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 275 ~~~~~~~~~~~~---~~~~---~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.......+.... ...+ ....++.+.+++.+||..||++|||+.+++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000000000000 0000 012346688999999999999999999999883
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=336.78 Aligned_cols=251 Identities=17% Similarity=0.206 Sum_probs=206.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.-+-|+|++.||.|+||.||++..+. +-..|-|++........++|+-|++||..++||+||++++.|..++.++|+.|
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 33457899999999999999999554 55567888877766678899999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC----CC
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM----DG 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~----~~ 222 (508)
||.||-.+.++.. -+..|++.++.-++.|++.||.|||++. |||||||..|||++-+|.++|+|||.+.... ..
T Consensus 110 FC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred ecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 9999999887765 4668999999999999999999999999 9999999999999999999999999875332 23
Q ss_pred CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
.++.|||+|||||+.. ..+|+.++||||||++|.||..+.+|- .++..+----.+.. .....---|+..+..
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH-helnpMRVllKiaK--SePPTLlqPS~Ws~~ 264 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH-HELNPMRVLLKIAK--SEPPTLLQPSHWSRS 264 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc-cccchHHHHHHHhh--cCCCcccCcchhhhH
Confidence 6789999999999864 578999999999999999999998552 22111100000000 011111125567788
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+|+.+||.+||..||++.++++|-
T Consensus 265 F~DfLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 265 FSDFLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred HHHHHHHHHhcCCccCCCHHHHhhCc
Confidence 99999999999999999999999983
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=333.38 Aligned_cols=247 Identities=18% Similarity=0.238 Sum_probs=197.9
Q ss_pred cccccccCCCCcccEEEEEEE----cCCCEEEEEEecCCCC----CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcc
Q 010529 71 SDNIVSESGEKAANVVYKGRL----ENRQWIAVKKFTKVAW----PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~ 141 (508)
+|++++.||+|+||.||+++. .+++.||+|++..... ...+.+..|+.++..+ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 367889999999999999984 3588999999864321 2235688899999999 599999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 99999999999999986 3456899999999999999999999999 99999999999999999999999999875432
Q ss_pred C-----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 222 G-----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 222 ~-----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
. ....||+.|+|||++.+. .++.++|||||||++|||+||+.|+...............+.. ....++...+
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIG 235 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCC
Confidence 2 234689999999999764 4788999999999999999999886432110000000011111 1123344566
Q ss_pred HHHHHHHHHhcccCCCCCC-----ChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rp-----s~~~il~~ 322 (508)
..+.+++.+||..||++|| ++.++++|
T Consensus 236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 7889999999999999999 77788877
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=316.52 Aligned_cols=240 Identities=20% Similarity=0.255 Sum_probs=194.8
Q ss_pred cCCCCcccEEEEEEE---cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL---ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
+||+|+||.||+|.+ .++..||+|+++..... ..+.+..|+.+++.++||||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999974 35788999998644322 2457899999999999999999999985 45678999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-------
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS------- 224 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~------- 224 (508)
+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||.||+++.++.+||+|||++........
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999986 3456899999999999999999999999 99999999999999999999999999876543321
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..++..|+|||.+....++.++||||||+++|||+| |..|+..... ......+........+...+.++.+++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQMIESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123468999999988888999999999999999998 8766543211 1112222222223344556788999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||+.||++||++.+|.+.|+.
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=341.14 Aligned_cols=247 Identities=17% Similarity=0.168 Sum_probs=197.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|.+++.||+|+||.||+|+. .+++.||||++.... ......+.+|+++++.++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 4688999999999999999994 568899999986432 122456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---- 221 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~---- 221 (508)
|||+||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 9999999999986 3456889999999999999999999999 99999999999999999999999998742210
Q ss_pred -------------------------------------------CCccccCCCCCCccccccCCcCccccchhhHHHHHHH
Q 010529 222 -------------------------------------------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDL 258 (508)
Q Consensus 222 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~el 258 (508)
.....||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0124689999999999988899999999999999999
Q ss_pred HhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCC---ChHHHHHH
Q 010529 259 LSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERP---STKNLVVT 322 (508)
Q Consensus 259 ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp---s~~~il~~ 322 (508)
++|+.||........... + ...............+..+.+++.+|+ .+|.+|+ |+.+++.|
T Consensus 238 l~G~~Pf~~~~~~~~~~~-i-~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLK-V-INWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHH-H-hccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999988754321110000 0 000011111112234667888888876 5999999 89999988
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=323.55 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=203.8
Q ss_pred CCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
...|.+.+.||.|+||.||++... ++..+|+|.+..........+.+|+.++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 345678889999999999999842 24568999887554344567999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC-----------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEc
Q 010529 143 LVAEYMPNDTLAKHLFHWE-----------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLS 211 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~ 211 (508)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+|||+++++.++|+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~ 162 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIG 162 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEec
Confidence 9999999999999986321 235899999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhcc
Q 010529 212 CFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDS 284 (508)
Q Consensus 212 Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 284 (508)
|||++....... ...++..|+|||++.+..++.++||||||+++|+|+| |..|+........ ...+..
T Consensus 163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~----~~~i~~- 237 (288)
T cd05093 163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV----IECITQ- 237 (288)
T ss_pred cCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHc-
Confidence 999987543321 2234668999999988889999999999999999999 7765533211110 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
......+...+..+.+|+.+||+.||.+|||+.+++..|+.+...
T Consensus 238 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 238 GRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111112223456799999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=324.17 Aligned_cols=251 Identities=22% Similarity=0.286 Sum_probs=200.7
Q ss_pred CCcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
+++|+++++||.|+||.||+|...+ +..||||+++...... ...+.+|+.++..++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4567888999999999999998532 4779999997543221 35688999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhcc--------------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 142 LLVAEYMPNDTLAKHLFHW--------------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
++++||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCc
Confidence 9999999999999998421 1235888899999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
+||+|||+++...... ...+++.|+|||.+.++.++.++||||||+++|||+| |..|+..... .....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 9999999987543322 2234678999999988889999999999999999998 5544432211 11111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+........+...+..+.+|+.+||+.+|.+||++.+|+..|+.
T Consensus 238 ~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111111223344567789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=321.62 Aligned_cols=245 Identities=18% Similarity=0.199 Sum_probs=194.5
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||+|+||.||+++. .+|+.||+|++...... ....+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999995 45899999998643221 233566799999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---ccccCCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---SYSTNLA 230 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~~t~~ 230 (508)
.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886545556899999999999999999999999 9999999999999999999999999987654432 3457899
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEP 310 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p 310 (508)
|+|||++.+..++.++|||||||++|+|++|+.|+...................... ......+.++.+|+.+||..||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999988889999999999999999999998764321110000001111111111 0112356779999999999999
Q ss_pred CCCCChHHHHHHHH
Q 010529 311 RERPSTKNLVVTLA 324 (508)
Q Consensus 311 ~~Rps~~~il~~L~ 324 (508)
.+||++.++++.+.
T Consensus 239 ~~R~~~~~~~~~~~ 252 (277)
T cd05607 239 EDRLGSREKNDDPR 252 (277)
T ss_pred hhCCCCccchhhhh
Confidence 99999977665443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=315.77 Aligned_cols=249 Identities=24% Similarity=0.333 Sum_probs=201.4
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.+|.+.++||.|+||.||+|...++..||+|++.... ...+.+.+|+.+++.++||||+++++++. ....++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 3578899999999999999997776679999987533 23467999999999999999999999874 456899999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----c
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----S 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~ 224 (508)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 999999997544456899999999999999999999999 9999999999999999999999999987554332 2
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..++..|+|||+..+..++.++||||||+++|+|+| |..|+........ .... ........+...+..+.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQV-ERGYRMPCPPECPESLHDLMC 237 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH----HHHH-hcCCCCCCccccCHHHHHHHH
Confidence 234567999999988889999999999999999999 6655433211110 1111 111111223456778999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHh
Q 010529 304 QCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+||+.+|++|||+.++++.|+..
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=319.14 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=198.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCC----EEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQ----WIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.++++++.||.|+||.||+|.+ .+++ .|++|.+...... ...++..|+.+++.++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 3567788999999999999995 3444 4777877543221 2346788888999999999999999985 456789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
|+||+++|+|.+++.. ....+++..+..|+.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 9999999999999964 3457899999999999999999999999 999999999999999999999999998754332
Q ss_pred -----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 223 -----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
....++..|+|||++.++.++.++||||||+++|||+| |..|+.+.... ....++........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 238 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDLLEKGERLAQPQICTI 238 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCcCCCCCCCCH
Confidence 12235678999999988889999999999999999998 87665432111 11122222111122223456
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+.+++.+||..+|++|||+.++++.|..+..
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 78899999999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=315.33 Aligned_cols=242 Identities=23% Similarity=0.330 Sum_probs=195.0
Q ss_pred ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 76 SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
+.||.|+||.||+|.. .+++.||+|.+...... ....+.+|+++++.++||||++++++|......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3579999999999995 46888999988644322 245799999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc------ccc
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS------YST 227 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~ 227 (508)
.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 81 LTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred HHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 999863 3446899999999999999999999999 99999999999999999999999999875443211 112
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
+..|+|||.+.++.++.++||||||+++|+|++ |..|+..... ......+........+...+..+.+++.+||
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 233 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGVRLPCPELCPDAVYRLMERCW 233 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCcccCCHHHHHHHHHHc
Confidence 346999999988889999999999999999998 6554422111 1111112222222334455678999999999
Q ss_pred ccCCCCCCChHHHHHHHH
Q 010529 307 QYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 307 ~~~p~~Rps~~~il~~L~ 324 (508)
..+|++|||+.++++.|.
T Consensus 234 ~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 234 EYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCChhhCcCHHHHHHHHh
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=330.47 Aligned_cols=237 Identities=20% Similarity=0.257 Sum_probs=193.0
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+. .+++.||||++.... ......+..|..++..+ +||||+++++++...+..|+||||++|+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 579999999999995 458899999987532 22345677888888876 7999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 9999886 3457899999999999999999999999 99999999999999999999999999875322 134568
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...+.... ...+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDE--VVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcCC--CCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999988654321111 11111111 12233456788999999999
Q ss_pred cCCCCCCCh------HHHHHH
Q 010529 308 YEPRERPST------KNLVVT 322 (508)
Q Consensus 308 ~~p~~Rps~------~~il~~ 322 (508)
.||.+||++ .+++.|
T Consensus 233 ~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 233 KNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCHHHCCCCCCCCCHHHHHcC
Confidence 999999998 666655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=339.74 Aligned_cols=245 Identities=16% Similarity=0.134 Sum_probs=196.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|.+++.||.|+||.||++.. .+++.||||++.... ......+.+|+++++.++||||+++++++.+....|||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 577889999999999999994 568899999986432 1223568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999986 3457899999999999999999999999 999999999999999999999999998532110
Q ss_pred -----------------------------------------------CccccCCCCCCccccccCCcCccccchhhHHHH
Q 010529 223 -----------------------------------------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVL 255 (508)
Q Consensus 223 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl 255 (508)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023589999999999888899999999999999
Q ss_pred HHHHhCCCCCCchhhhhhhccchhhhhc--cccCCCCCHHHHHHHHHHHHHhcccCCCCC---CChHHHHHHH
Q 010529 256 LDLLSGKHIPPSHALDMIRGENLNLLMD--SHLEGKFSSEEATQVVGLASQCLQYEPRER---PSTKNLVVTL 323 (508)
Q Consensus 256 ~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R---ps~~~il~~L 323 (508)
|||+||..||....... ....+.. ..+.-+.....+.++.+|+.+||. +|.+| +|+.+++.|-
T Consensus 239 ~elltG~~Pf~~~~~~~----~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 239 FECLIGWPPFCSENSHE----TYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhhcCCCCCCCCCHHH----HHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 99999998865432110 0111111 001101111345778999999997 66665 5999999884
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=316.63 Aligned_cols=250 Identities=24% Similarity=0.328 Sum_probs=201.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeee-eCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCC-AGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~-~~~~~~lv~E 146 (508)
+..+|.+.+.||+|+||.||++... +..|++|.++... ..+.+.+|+.++++++|+||+++++++. .++..++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 3456788899999999999999865 5669999986433 3467999999999999999999999765 4467899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 225 (508)
|+++++|.+++.......+++..++.++.||+.||.|||+++ ++||||||+||++++++.+||+|||++...... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 159 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCC
Confidence 999999999997544556899999999999999999999999 999999999999999999999999998755433 223
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
.++..|+|||++.+..++.++||||||+++|+|++ |+.|+....... ....+........+...+..+.+++.+
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~ 234 (256)
T cd05082 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPVVYDVMKQ 234 (256)
T ss_pred ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 34567999999988889999999999999999998 776654321110 111111111222334556789999999
Q ss_pred hcccCCCCCCChHHHHHHHHHh
Q 010529 305 CLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~ 326 (508)
||..+|++|||+.++++.|+.+
T Consensus 235 ~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 235 CWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=320.59 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=199.6
Q ss_pred cccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccceee
Q 010529 73 NIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLLV 144 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~lv 144 (508)
++++.||+|+||.||++.. .++..||+|.+..... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6788999999999988653 3577899999875432 2346788999999999999999999988654 357899
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
|||+++++|.+++. ...+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999999999985 346999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchh---hhhhhc-------cchhhhhccccC
Q 010529 224 ------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHA---LDMIRG-------ENLNLLMDSHLE 287 (508)
Q Consensus 224 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~---~~~~~~-------~~~~~~~~~~~~ 287 (508)
...++..|+|||.+.+..++.++||||||+++|+|+||..|+.... ...... ............
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 1234567999999988889999999999999999999987753211 111100 011111111122
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
...+...+..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2233445678999999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=323.34 Aligned_cols=256 Identities=22% Similarity=0.255 Sum_probs=202.7
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-CC--EEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-RQ--WIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~l 143 (508)
|++|.+.+.||.|+||.||+|...+ +. .+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 4678889999999999999999643 33 468888764322 2245789999999999 79999999999998889999
Q ss_pred eeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeE
Q 010529 144 VAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPR 209 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~k 209 (508)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999986421 135889999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccc
Q 010529 210 LSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSH 285 (508)
Q Consensus 210 l~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 285 (508)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||+| |..|+....... ....+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-----~~~~~~~~ 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQG 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhcC
Confidence 9999998643221 11122456999999988889999999999999999998 877654321111 11111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.....+...+..+.+|+.+||..+|.+|||+.++++.|..+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 222233345678999999999999999999999999998887544
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=339.68 Aligned_cols=244 Identities=17% Similarity=0.166 Sum_probs=195.3
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.|.+++.||+|+||.||+|+. .+++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 467889999999999999994 5688999999865322 123468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----- 221 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----- 221 (508)
||+||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999863 456889999999999999999999999 99999999999999999999999998742210
Q ss_pred ----------------------------------------------CCccccCCCCCCccccccCCcCccccchhhHHHH
Q 010529 222 ----------------------------------------------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVL 255 (508)
Q Consensus 222 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl 255 (508)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0123588999999999988999999999999999
Q ss_pred HHHHhCCCCCCchhhhhhhccchhhhhc--cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---hHHHHHH
Q 010529 256 LDLLSGKHIPPSHALDMIRGENLNLLMD--SHLEGKFSSEEATQVVGLASQCLQYEPRERPS---TKNLVVT 322 (508)
Q Consensus 256 ~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps---~~~il~~ 322 (508)
|||++|+.||....... ....+.. .....+.....++++.+++.+|+ .+|.+|++ +.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~----~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLE----TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHH----HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999998875431110 0011111 11111112334677888888876 59999987 8888876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=321.92 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=201.4
Q ss_pred CCCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
++.++.+.++||+|+||.||++... ++..+++|.+..........+.+|+++++.++|+||+++++++......
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 3456778899999999999999732 3567899988765544456899999999999999999999999998999
Q ss_pred eeeeecCCCCCHHHHhhccCC-------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCe
Q 010529 142 LLVAEYMPNDTLAKHLFHWEK-------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~ 208 (508)
++||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCE
Confidence 999999999999999864321 35889999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhh
Q 010529 209 RLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLL 281 (508)
Q Consensus 209 kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~ 281 (508)
||+|||++....... ...+++.|+|||.+.+..++.++|||||||++|+|++ |..|+...... ......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~ 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT----EAIECI 237 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH----HHHHHH
Confidence 999999987543321 2234678999999988889999999999999999999 76554321110 001111
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
........+...+..+.+|+.+||..||.+||++.+|+..|+
T Consensus 238 -~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 -TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111223345677999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=328.06 Aligned_cols=237 Identities=20% Similarity=0.286 Sum_probs=191.2
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+. .+++.||||+++... ....+.+..|..++..+ +||||+++++++..++..++||||++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 458889999997532 12334566777777654 8999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 227 (508)
+|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99998863 457899999999999999999999999 999999999999999999999999998754322 33568
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+.. ....++...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~--~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL----FDSILN--DRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHc--CCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999988654321111 111111 1122344456778999999999
Q ss_pred cCCCCCCChH-HHHHH
Q 010529 308 YEPRERPSTK-NLVVT 322 (508)
Q Consensus 308 ~~p~~Rps~~-~il~~ 322 (508)
.||.+||++. +++.+
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05592 233 RDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999875 55554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=331.33 Aligned_cols=241 Identities=16% Similarity=0.244 Sum_probs=194.0
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+. .+++.||||+++.... .....+..|..++..+ +||||+++++++......||||||++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 579999999999995 4688999999975432 2234688899999988 7999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 9998885 3467999999999999999999999999 99999999999999999999999999874221 234568
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh-hhcc----chhhhhccccCCCCCHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-IRGE----NLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
|+.|+|||++.+..++.++|||||||++|+|+||+.|+....... .... ....+.... ...+...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--CCCCCCCCHHHHHHH
Confidence 999999999998899999999999999999999998864211000 0000 011111111 123444567789999
Q ss_pred HHhcccCCCCCCC------hHHHHHH
Q 010529 303 SQCLQYEPRERPS------TKNLVVT 322 (508)
Q Consensus 303 ~~cl~~~p~~Rps------~~~il~~ 322 (508)
.+||..||.+|+| +.+++.|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999997 6777766
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=315.64 Aligned_cols=249 Identities=25% Similarity=0.351 Sum_probs=204.9
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.+|++.+.||.|+||.||+|... ++.||||.+..... ..+++.+|+.+++.++|+||+++++++......++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 45678889999999999999875 67799999976543 45689999999999999999999999998889999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-cccC
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTN 228 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~t 228 (508)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+........ ...+
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 162 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP 162 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence 999999997544457999999999999999999999999 99999999999999999999999999886643322 2335
Q ss_pred CCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
..|+|||++.++.++.++||||||+++|+|++ |..|+....... ....+........+...++.+.+++.+||.
T Consensus 163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 237 (256)
T cd05039 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPHVEKGYRMEAPEGCPPEVYKVMKDCWE 237 (256)
T ss_pred ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhcCCCCCCccCCCHHHHHHHHHHhc
Confidence 67999999988889999999999999999998 776654321111 111111111222334456789999999999
Q ss_pred cCCCCCCChHHHHHHHHHh
Q 010529 308 YEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 308 ~~p~~Rps~~~il~~L~~~ 326 (508)
.+|++|||+.+++..|+.+
T Consensus 238 ~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 238 LDPAKRPTFKQLREQLALI 256 (256)
T ss_pred cChhhCcCHHHHHHHHhcC
Confidence 9999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=324.05 Aligned_cols=257 Identities=23% Similarity=0.280 Sum_probs=202.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCC--EEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQ--WIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
.|++|++.+.||+|+||.||+|.+. ++. .+++|.+...... ....+.+|+.++.++ +||||+++++++...+..+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 5677888999999999999999954 443 4577777643322 245788999999999 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCe
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~ 208 (508)
+||||+++++|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcE
Confidence 9999999999999986421 235789999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhcc
Q 010529 209 RLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDS 284 (508)
Q Consensus 209 kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 284 (508)
||+|||++...... ....++..|+|||++.+..++.++||||||+++|||+| |..|+....... ....+..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~ 238 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQ 238 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-----HHHHHhc
Confidence 99999998643221 11223567999999988888999999999999999998 876654321110 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
......+...+..+.+|+.+||..+|++|||+.++++.|..+....
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1112223345677899999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=330.62 Aligned_cols=243 Identities=19% Similarity=0.241 Sum_probs=196.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCC-CCcceeeeeeeCCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRK-RLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-nIv~~~~~~~~~~~~~lv~ 145 (508)
+|.+++.||.|+||.||+|... +++.||||++.... ....+.+..|+.++..+.|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4678899999999999999954 57889999987532 22345788899999999765 5888999998889999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---- 221 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~---- 221 (508)
||++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 9999999999886 3456899999999999999999999999 99999999999999999999999999864322
Q ss_pred CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 222 GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.|+....... ....+... ...++...+..+.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~----~~~~i~~~--~~~~~~~~~~~~~~l 231 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE----LFQSIMEH--NVSYPKSLSKEAVSI 231 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----HHHHHHcC--CCCCCCCCCHHHHHH
Confidence 123468999999999998889999999999999999999998865332110 01111111 122344456788999
Q ss_pred HHHhcccCCCCCCCh-----HHHHHH
Q 010529 302 ASQCLQYEPRERPST-----KNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~-----~~il~~ 322 (508)
+.+||..||.+|++. .++++|
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 232 CKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999999986 566554
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=335.54 Aligned_cols=250 Identities=20% Similarity=0.188 Sum_probs=200.1
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
....+|++++.||+|+||.||+++. .+++.||+|++.... ......+.+|+.+++.++||||+++++++..+...|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 3346788999999999999999995 458889999986422 123446889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 9999999999999984 346889999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CccccCCCCCCccccccC----CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC--
Q 010529 223 -----KSYSTNLAYTPPEYLKNG----RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-- 291 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 291 (508)
....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...... .....+........++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~ 271 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----GTYSKIMDHKNSLNFPED 271 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCcccCCCCc
Confidence 245689999999998653 3788999999999999999999887543211 1112222211111122
Q ss_pred HHHHHHHHHHHHHhcccCCCC--CCChHHHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRE--RPSTKNLVVTLA 324 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~--Rps~~~il~~L~ 324 (508)
...+..+.+++.+||..++.+ |+|+.++++|-+
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 272 VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 234677889999999855544 889999999843
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=329.93 Aligned_cols=237 Identities=17% Similarity=0.243 Sum_probs=193.6
Q ss_pred cCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+.. +++.||||++.... ......+..|.+++..+ +||||+++++++...+..|+||||++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5799999999999954 58899999987532 22345677899998876 8999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 227 (508)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 9998886 3457899999999999999999999999 999999999999999999999999998753222 33468
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|+|+||+.|+........ ...+.... ...+...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----FESILHDD--VLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH----HHHHHcCC--CCCCCCCCHHHHHHHHHHhc
Confidence 9999999999888899999999999999999999988654321111 11111111 11233356778999999999
Q ss_pred cCCCCCC-------ChHHHHHH
Q 010529 308 YEPRERP-------STKNLVVT 322 (508)
Q Consensus 308 ~~p~~Rp-------s~~~il~~ 322 (508)
.||.+|| ++.+++++
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcC
Confidence 9999999 78888876
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=318.70 Aligned_cols=249 Identities=18% Similarity=0.235 Sum_probs=201.7
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
...+|++++.||+|+||.||+|+. .+++.||+|++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 455788999999999999999995 5688899999976544445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06646 87 YCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR 163 (267)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence 999999999886 3457899999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC---CCCHHHHH
Q 010529 223 KSYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG---KFSSEEAT 296 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 296 (508)
....++..|+|||.+. ...++.++||||||+++|+|++|+.|+.... .. .....+....... ......+.
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH-PM---RALFLMSKSNFQPPKLKDKTKWSS 239 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc-hh---hhheeeecCCCCCCCCccccccCH
Confidence 2345788999999874 3457889999999999999999997753221 00 0000000111110 11223467
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+.+++.+||..+|++|||+.+++++|
T Consensus 240 ~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 240 TFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 899999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=327.05 Aligned_cols=247 Identities=20% Similarity=0.189 Sum_probs=210.3
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---hhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv 144 (508)
..|.+.+.||+|.||.||+++.+ +|+.+|+|.+.+..... .+.+.+|+.+|+++. |||||.+++++.+....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 34677789999999999999954 49999999997765433 358999999999997 99999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC----CCCeEEcccCCccccC
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE----DGDPRLSCFGLMKNSM 220 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~----~~~~kl~Dfg~a~~~~ 220 (508)
||+|.||.|.+.+... .+++..+..++.||+.++.|||+.| |+||||||+|+|+.. ++.+|++|||++....
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999754 3999999999999999999999999 999999999999953 3579999999999877
Q ss_pred CC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc--ccCCCCCHHHH
Q 010529 221 DG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS--HLEGKFSSEEA 295 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 295 (508)
.+ ...+||+.|+|||++.+..|+..+||||+|+++|.|++|.+||+......... .+... ..........+
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~----~i~~~~~~f~~~~w~~is 266 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL----AILRGDFDFTSEPWDDIS 266 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----HHHcCCCCCCCCCccccC
Confidence 63 45689999999999998999999999999999999999999887654221111 11111 12333445678
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+.+++..|+..||..|+|+.++++|-|
T Consensus 267 ~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 267 ESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred HHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 89999999999999999999999999855
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=333.02 Aligned_cols=250 Identities=16% Similarity=0.212 Sum_probs=202.4
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-C-----CCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-R-----KRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~~~~~~~~~~~~~l 143 (508)
.|.+++.||+|+||.|.+|+ ..+++.||||+++... .-..+-..|+.+|..|+ | -|||+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 46779999999999999999 5679999999997654 23456778999999996 4 479999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC--CCeEEcccCCccccCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED--GDPRLSCFGLMKNSMD 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~--~~~kl~Dfg~a~~~~~ 221 (508)
|+|.+ ..+|+++++.++-..++...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.+.....
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 99999 589999999888888999999999999999999999999 9999999999999644 3699999999986554
Q ss_pred C-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh----------------hh-ccchhhhhc
Q 010529 222 G-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM----------------IR-GENLNLLMD 283 (508)
Q Consensus 222 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----------------~~-~~~~~~~~~ 283 (508)
. -++..+..|+|||++.|.+|+.+.||||||||+.||++|.++|+++.... +. +......++
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~ 423 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFT 423 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehh
Confidence 4 35567889999999999999999999999999999999998777641100 00 000000000
Q ss_pred --------------------------------cccCC--------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 284 --------------------------------SHLEG--------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 284 --------------------------------~~~~~--------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
....+ .........+.+++.+||.+||.+|+|..++++|-
T Consensus 424 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hp 503 (586)
T KOG0667|consen 424 SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHP 503 (586)
T ss_pred ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCc
Confidence 00000 01113356789999999999999999999999993
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-41 Score=322.90 Aligned_cols=251 Identities=16% Similarity=0.217 Sum_probs=206.6
Q ss_pred hcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+....|.+++.||.|+||.||+|.. .+++.|++|.+..........+.+|+.+++.++||||+++++.+..+...++|
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 34456788899999999999999994 56889999999776655567899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||++|++|.+++. ...+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 96 ~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred ecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999999984 346899999999999999999999999 999999999999999999999999988754332
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ...............+...+..+.+
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALYLIATNGTPELQNPEKLSAIFRD 248 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH---hHHHHhcCCCCCCCCccccCHHHHH
Confidence 23467889999999988888999999999999999999998875432100 0000011111111223455677999
Q ss_pred HHHHhcccCCCCCCChHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L 323 (508)
++.+||..+|++|||+.+++.+-
T Consensus 249 li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhhCh
Confidence 99999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=316.29 Aligned_cols=255 Identities=16% Similarity=0.192 Sum_probs=206.7
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|.+.+.||.|++|.||+|.. .++..|+||.+....... ...+.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677889999999999999994 578899999886533222 347889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 146 EYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 2456899999999999999999999999 999999999999999999999999988755432
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....++..|+|||++.+..++.++||||||+++|+|++|..|+.....+.... ...+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHHH
Confidence 23467889999999988889999999999999999999998765332111100 0011111111112234677899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+++.+||..+|.+|||+.+|++.+..+.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=330.10 Aligned_cols=241 Identities=17% Similarity=0.247 Sum_probs=193.1
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+. .+++.||+|+++..... ....+..|+.++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 579999999999995 45889999999764322 234577898888777 8999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 9998885 3457999999999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-hccc----hhhhhccccCCCCCHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-RGEN----LNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
|+.|+|||++.+..++.++|||||||++|+|+||+.|+........ .... ...+... ...++...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 9999999999988999999999999999999999988642110000 0000 0111111 1123445667789999
Q ss_pred HHhcccCCCCCCCh------HHHHHH
Q 010529 303 SQCLQYEPRERPST------KNLVVT 322 (508)
Q Consensus 303 ~~cl~~~p~~Rps~------~~il~~ 322 (508)
.+||..||.+|||+ .+++.|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 99999999999984 677665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=299.35 Aligned_cols=256 Identities=20% Similarity=0.225 Sum_probs=209.2
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--------hhHHHHHHHHhccC-CCCCCcceee
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--------PTQFKEEAEGVGKL-RRKRLANLIG 133 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~nIv~~~~ 133 (508)
.+...|..|.--+.+|+|..++|-++. .++|..+|+|++....... .+.-.+|+.+|+++ .||+|+++.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 344455666666677999999999998 5668889999986433221 23456799999999 8999999999
Q ss_pred eeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEccc
Q 010529 134 YCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCF 213 (508)
Q Consensus 134 ~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Df 213 (508)
++..+..+++|+|.|+.|.|.++|. ..-.+++....+|+.|+.+|++|||.+. ||||||||+|||++++.++||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEecc
Confidence 9999999999999999999999996 5678999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC---ccccCCCCCCcccccc------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc
Q 010529 214 GLMKNSMDGK---SYSTNLAYTPPEYLKN------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS 284 (508)
Q Consensus 214 g~a~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~ 284 (508)
|++....++. ..+|||+|+|||.+.- ..|+...|+|++||++|.|+.|.+||+..- ++. -++.++..
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-Qml---MLR~ImeG 243 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-QML---MLRMIMEG 243 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-HHH---HHHHHHhc
Confidence 9999888874 5689999999999862 457889999999999999999998876421 100 01111111
Q ss_pred --ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 285 --HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 285 --~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
....+-..+.+....+||.+||+.||.+|.|+.|++.|-.-+
T Consensus 244 kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 244 KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 112233456788899999999999999999999999996554
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=314.45 Aligned_cols=245 Identities=20% Similarity=0.221 Sum_probs=203.4
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+.+.||+|++|.||+|.. .++..|++|.+..... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 56778899999999999995 4688899999864322 23567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
+|++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 9999999997655567999999999999999999999999 999999999999999999999999998755443 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..+++.|+|||++.+..++.++||||||+++|+|+||+.|+....... ....... ......+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA----LILKIIR-GVFPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHc-CCCCCCccccCHHHHHHHHH
Confidence 357889999999998889999999999999999999998765332111 0111111 11222333566789999999
Q ss_pred hcccCCCCCCChHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~ 322 (508)
||+.+|++||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=329.60 Aligned_cols=243 Identities=19% Similarity=0.248 Sum_probs=196.8
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+|.+++.||+|+||.||+|+.. +++.||||++..... .....+..|..++..+ .|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4678899999999999999954 578899999875422 2234577788888877 6899999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---- 221 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~---- 221 (508)
||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 9999999999886 3456899999999999999999999999 99999999999999999999999999875332
Q ss_pred CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 222 GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
.....||+.|+|||++.+..++.++|||||||++|||+||+.|+........ ...+... ...++...+.++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~l 231 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSKEAVAI 231 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCcCCHHHHHH
Confidence 2345689999999999998999999999999999999999988654321111 1111111 112344567789999
Q ss_pred HHHhcccCCCCCCCh-----HHHHHH
Q 010529 302 ASQCLQYEPRERPST-----KNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~-----~~il~~ 322 (508)
+.+||+.+|.+|++. .+++++
T Consensus 232 i~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 232 CKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 999999999999985 555544
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=320.01 Aligned_cols=248 Identities=20% Similarity=0.299 Sum_probs=196.6
Q ss_pred cccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
+|++.+.||+|+||.||+|... .+..||||++..... .....+.+|+.+++.++||||+++++++..+...++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l 86 (277)
T cd05062 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 86 (277)
T ss_pred HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence 4677889999999999999853 246799999864322 223468899999999999999999999998899999
Q ss_pred eeecCCCCCHHHHhhccC--------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 144 VAEYMPNDTLAKHLFHWE--------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~ 165 (277)
T cd05062 87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCC
Confidence 999999999999986422 124678889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCC
Q 010529 216 MKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEG 288 (508)
Q Consensus 216 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (508)
+....... ...+++.|+|||++.+..++.++||||||+++|||++ |..|+...... .....+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~ 240 (277)
T cd05062 166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QVLRFVMEGGLL 240 (277)
T ss_pred ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcC
Confidence 87543322 2234677999999988889999999999999999999 56554332111 111111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+...+..+.+++.+||+.+|++|||+.+++++|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 223345677999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=344.48 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=202.0
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
-..|.+.+.||+|+||+||+|+ ..+++.||||++...... ....+.+|+.++..++|+||++++..+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 3578889999999999999999 557899999998654322 2456889999999999999999988765432
Q ss_pred --cceeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 140 --ERLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 140 --~~~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEeccc
Confidence 357999999999999988642 2356899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCC------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC
Q 010529 216 MKNSMD------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289 (508)
Q Consensus 216 a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
++.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ +...... ....
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~----~~~~~~~-~~~~ 264 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV----MHKTLAG-RYDP 264 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHhcC-CCCC
Confidence 875432 2345689999999999988899999999999999999999988654321111 1111111 1122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+...++++.+++.+||..||.+|||+.+++.+-
T Consensus 265 ~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 265 LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 3445677899999999999999999999999873
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=327.27 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=192.5
Q ss_pred ccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.||+|+||.||+|+.. ++..||||.++... ......+..|..++..+ +||||+++++++...+..|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 35799999999999954 58899999997532 12345677788888765 899999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~ 226 (508)
++|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++..... .....
T Consensus 81 g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 99999886 3457899999999999999999999999 99999999999999999999999999874322 23456
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
||+.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+... ....+...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL----FESIRVD--TPHYPRWITKESKDILEKLF 231 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHHHHHHHc
Confidence 89999999999988999999999999999999999988754321111 1111111 11223345677899999999
Q ss_pred ccCCCCCCChH-HHHHH
Q 010529 307 QYEPRERPSTK-NLVVT 322 (508)
Q Consensus 307 ~~~p~~Rps~~-~il~~ 322 (508)
..||.+||++. +++.|
T Consensus 232 ~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 232 ERDPTRRLGVVGNIRGH 248 (316)
T ss_pred cCCHHHcCCChHHHHcC
Confidence 99999999984 56544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=326.51 Aligned_cols=238 Identities=20% Similarity=0.262 Sum_probs=192.2
Q ss_pred ccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.||+|+||.||+|+.. +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 35799999999999954 57889999997542 22345677788888765 999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~ 226 (508)
|+|.+++.. ...+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence 999999863 456899999999999999999999999 99999999999999999999999999875322 13446
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
||+.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+.. .....+...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~----~~~i~~--~~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL----FQSIRM--DNPCYPRWLTREAKDILVKLF 231 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHh--CCCCCCccCCHHHHHHHHHHh
Confidence 89999999999888899999999999999999999988653221100 011100 011223345677899999999
Q ss_pred ccCCCCCCChH-HHHHH
Q 010529 307 QYEPRERPSTK-NLVVT 322 (508)
Q Consensus 307 ~~~p~~Rps~~-~il~~ 322 (508)
..||.+||++. +++.+
T Consensus 232 ~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 232 VREPERRLGVKGDIRQH 248 (316)
T ss_pred ccCHhhcCCChHHHHcC
Confidence 99999999997 66554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=315.04 Aligned_cols=238 Identities=18% Similarity=0.331 Sum_probs=189.8
Q ss_pred cCCCCcccEEEEEEEcC-------------CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 77 ESGEKAANVVYKGRLEN-------------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.||.|+||.||+|.+.+ ...|++|.+..........|.+|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 57999999999998532 22588998766544445678899999999999999999999998889999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC-------eEEcccCCc
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD-------PRLSCFGLM 216 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~-------~kl~Dfg~a 216 (508)
||||+++++|..++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999988753 3456899999999999999999999999 999999999999987664 899999998
Q ss_pred cccCCCCccccCCCCCCccccc-cCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHH
Q 010529 217 KNSMDGKSYSTNLAYTPPEYLK-NGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 217 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (508)
..........++..|+|||.+. +..++.++||||||+++|||++ |..|+...... ........... .....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~--~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-----EKERFYEGQCM--LVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-----HHHHHHhcCcc--CCCCC
Confidence 8766555667888999999986 4668889999999999999985 65544322110 00111111111 11123
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.++.+|+.+||+.||.+||++.+|++.+
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 46789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=317.37 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=200.8
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCC----EEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQ----WIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.++++++.||.|+||+||+|.+ .++. .||||.+...... ....+.+|+.++..+.||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 4567888999999999999984 4444 4799998654322 24578899999999999999999999865 45789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
+|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++......
T Consensus 86 ~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 86 VTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred EEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 9999999999999864 3456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred c------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 S------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ~------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
. ..++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ......+........+...+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 238 (279)
T cd05109 164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REIPDLLEKGERLPQPPICTI 238 (279)
T ss_pred ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCCCcCCCCccCCH
Confidence 1 223567999999988889999999999999999998 6655432111 111112222222223344567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+.+++.+||..||++||++.+++..|..+...
T Consensus 239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 239 DVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 899999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=321.20 Aligned_cols=252 Identities=23% Similarity=0.315 Sum_probs=202.4
Q ss_pred CcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~ 141 (508)
++|++++.||+|+||.||++...+ ...||+|.+..... .....+.+|+.++..+ +|+||+++++++..++..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 346778899999999999998532 36799999875432 1234688999999999 899999999999999999
Q ss_pred eeeeecCCCCCHHHHhhcc--------------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 142 LLVAEYMPNDTLAKHLFHW--------------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
++||||+++++|..++... ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~ 170 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHV 170 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCe
Confidence 9999999999999998532 2356899999999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
+||+|||++....... ...++..|+|||++.+..++.++|||||||++|||++ |..|+...... ....
T Consensus 171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~ 245 (293)
T cd05053 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-----ELFK 245 (293)
T ss_pred EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-----HHHH
Confidence 9999999988654332 1223567999999988889999999999999999998 77665432111 1111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+........+...+..+.+|+.+||..+|.+|||+.++++.|+.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11122222234455678999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.76 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=201.9
Q ss_pred ccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 72 DNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
|++.+.||+|+||.||+|... +...+++|.+..... .....+.+|+.+++.++||||+++++.|...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 567888999999999999843 235688888865432 1245788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccC----------------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee
Q 010529 145 AEYMPNDTLAKHLFHWE----------------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill 202 (508)
|||+.+++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 99999999999885321 135789999999999999999999999 9999999999999
Q ss_pred CCCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhc
Q 010529 203 DEDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRG 275 (508)
Q Consensus 203 ~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~ 275 (508)
++++.+||+|||++....... ...++..|+|||++.+..++.++||||||+++|+|+| |..|+.....
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----- 235 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP----- 235 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-----
Confidence 999999999999987543321 2234678999999988889999999999999999999 7766543211
Q ss_pred cchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 276 ENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..+...+........+...+..+.+++.+||+.+|.+||++.+++..|+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11112222222223344556789999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=331.37 Aligned_cols=234 Identities=19% Similarity=0.258 Sum_probs=192.2
Q ss_pred ccCCCCcccEEEEEEE----cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 76 SESGEKAANVVYKGRL----ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
+.||+|+||.||+++. .+|+.||||++..... .....+..|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5689999999999984 3578999999975332 223467889999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSY 225 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 225 (508)
+++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999986 3456899999999999999999999999 999999999999999999999999998755433 234
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
.||+.|+|||++.+..++.++||||||+++|+|+||+.|+....... ....+.... ...+...+..+.+|+.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~----~~~~i~~~~--~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE----TMTMILKAK--LGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH----HHHHHHcCC--CCCCCCCCHHHHHHHHHH
Confidence 68899999999988888999999999999999999998865321110 011111111 123444567889999999
Q ss_pred cccCCCCCCChHH
Q 010529 306 LQYEPRERPSTKN 318 (508)
Q Consensus 306 l~~~p~~Rps~~~ 318 (508)
|+.||.+|||+.+
T Consensus 233 l~~~P~~R~~a~~ 245 (318)
T cd05582 233 FKRNPANRLGAGP 245 (318)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=313.23 Aligned_cols=242 Identities=20% Similarity=0.270 Sum_probs=194.5
Q ss_pred cCCCCcccEEEEEEEc---CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.||.|+||.||+|.+. ++..||||++...... ..+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4799999999999853 3556999998755322 2456999999999999999999999885 457899999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-------c
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-------Y 225 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~-------~ 225 (508)
|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 3457899999999999999999999999 99999999999999999999999999875443211 1
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
.++..|+|||++.+..++.++||||||+++|+|++ |..|+.... .......+........+...+.++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK-----GPEVMSFIEQGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC-----HHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence 22467999999988889999999999999999997 876653321 111112222222233445567889999999
Q ss_pred hcccCCCCCCChHHHHHHHHHh
Q 010529 305 CLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~ 326 (508)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=312.97 Aligned_cols=247 Identities=22% Similarity=0.306 Sum_probs=200.8
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+|.+.+.||.|++|.||+|...++..||+|.+.... ...+.+.+|+.+++.++||||+++++++. ....++||||+.+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 467788999999999999998777779999886543 23467899999999999999999999874 4568999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----cc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----SY 225 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~ 225 (508)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 99999997544556899999999999999999999999 9999999999999999999999999987553322 22
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
.++..|+|||...+..++.++||||||+++|+|+| |..|+....... ....+ ........+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE----VLEQV-ERGYRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH-HcCCCCCCCcccCHHHHHHHHH
Confidence 34567999999988889999999999999999999 776654322111 11111 1111222344567789999999
Q ss_pred hcccCCCCCCChHHHHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~ 325 (508)
||..||.+||++.++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=318.79 Aligned_cols=254 Identities=21% Similarity=0.349 Sum_probs=200.1
Q ss_pred cccccccCCCCcccEEEEEEEc-----CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC--Cccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-----NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~l 143 (508)
.+++++.||.|+||.||++... ++..||||++........+.|.+|+++++.++||||+++++++... ...++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 5678899999999999999842 4788999998765544456789999999999999999999987543 46789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999988654432
Q ss_pred cc-------ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh---ccc--------hhhhhccc
Q 010529 224 SY-------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR---GEN--------LNLLMDSH 285 (508)
Q Consensus 224 ~~-------~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~~~--------~~~~~~~~ 285 (508)
.. .++..|+|||++.+..++.++||||||+++|||++|..++......... ... ....+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 21 1234599999998888999999999999999999987653322111110 000 00111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.....+...+..+.+|+.+||..+|++|||+.+|+..|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11122334567899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=313.06 Aligned_cols=254 Identities=17% Similarity=0.219 Sum_probs=207.2
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..|.+.+.||.|+||.||+|... +++.||+|.++.... .....+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 35778889999999999999965 789999998864322 22457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 146 EYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||+++++|.+++... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999988642 2456899999999999999999999999 999999999999999999999999998754432
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH-HHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS-EEATQV 298 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 298 (508)
....++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... ....+........+. ..+..+
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYPPLPADHYSEEL 237 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCCCCChhhcCHHH
Confidence 2345788899999998888999999999999999999999876432211100 001111111122222 556789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+++.+||..+|++|||+.+|++.|..+.
T Consensus 238 ~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 238 RDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 99999999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=335.11 Aligned_cols=244 Identities=19% Similarity=0.146 Sum_probs=191.6
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.|.+.+.||.|+||.||+|... .++.||||... ...+.+|+++|++++|+|||++++++..++..+||||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 4778889999999999999954 47889999642 2346789999999999999999999999999999999995
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------C
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------K 223 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------~ 223 (508)
++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 244 -~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 -SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 788888754 3347999999999999999999999999 999999999999999999999999998754322 1
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh------------hhhhccchh-hhhcc------
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL------------DMIRGENLN-LLMDS------ 284 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~------------~~~~~~~~~-~~~~~------ 284 (508)
...||..|+|||++.+..++.++|||||||++|||++|..++..... ..+...... ..+..
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 24589999999999988899999999999999999998755432110 000000000 00000
Q ss_pred ----------ccC----CCCC---HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 285 ----------HLE----GKFS---SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 285 ----------~~~----~~~~---~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
... .... ......+.+|+.+||+.||.+|||+.|++++-
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 000 0000 02234788999999999999999999999873
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=318.24 Aligned_cols=240 Identities=25% Similarity=0.364 Sum_probs=193.1
Q ss_pred ccCCCCcccEEEEEEEcC-C-------CEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 76 SESGEKAANVVYKGRLEN-R-------QWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.||.|+||.||+|.... + ..|++|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 357999999999998532 2 24788887654433456789999999999999999999999998999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC--------eEEcccCCcccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD--------PRLSCFGLMKNS 219 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~--------~kl~Dfg~a~~~ 219 (508)
+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++. ++++|||++...
T Consensus 81 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 999999999964 2346899999999999999999999999 999999999999987665 699999998877
Q ss_pred CCCCccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 220 MDGKSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 220 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.......++..|+|||++.+ ..++.++||||||+++|+|++|..+|........ ....... ....+.....++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~ 232 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK----KLQFYED--RHQLPAPKWTEL 232 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH----HHHHHHc--cccCCCCCcHHH
Confidence 66666778899999999976 4578899999999999999999655433211110 0111111 112233345678
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+|+.+||+.+|++|||+.++++.|
T Consensus 233 ~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 233 ANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHHhccChhhCCCHHHHHHhc
Confidence 9999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=338.29 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=191.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC--------Cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--------DE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--------~~ 140 (508)
..|.+++.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 4688899999999999999995 568899999885432 3456899999999999999999886432 23
Q ss_pred ceeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCcc
Q 010529 141 RLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMK 217 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~ 217 (508)
+++||||++ ++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 142 l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccch
Confidence 679999997 5777766432 3457899999999999999999999999 99999999999998654 69999999998
Q ss_pred ccCCC---CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh--------hccchhhh----
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI--------RGENLNLL---- 281 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~--------~~~~~~~~---- 281 (508)
..... ....+|+.|+|||++.+. .++.++|||||||++|||+||.+||.+...... .......+
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 299 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN 299 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence 65433 345678999999998754 689999999999999999999987754311000 00000000
Q ss_pred -----------hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 282 -----------MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 282 -----------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
....+...++...+.++.+|+.+||..||.+|||+.++++|-+
T Consensus 300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 0000001112234578999999999999999999999998843
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=332.28 Aligned_cols=253 Identities=19% Similarity=0.276 Sum_probs=201.2
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCC-CCCCcceeeeeeeCCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLR-RKRLANLIGYCCAGDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~ 141 (508)
+++.+.+.||.|+||.||+|++. .+..||||+++...... ...+.+|+++|.++. |||||+++++|...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 34667889999999999999864 24579999997543222 346889999999997 99999999999998999
Q ss_pred eeeeecCCCCCHHHHhhccCC-----------------------------------------------------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWEK----------------------------------------------------------- 162 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~----------------------------------------------------------- 162 (508)
++||||+++|+|.+++.....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999864211
Q ss_pred -------------------------------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC
Q 010529 163 -------------------------------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205 (508)
Q Consensus 163 -------------------------------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~ 205 (508)
..+++..++.|+.||+.||.|||+.+ ++||||||+|||++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~ 275 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEG 275 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCC
Confidence 23677888999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccch
Q 010529 206 GDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENL 278 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 278 (508)
+.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... ...
T Consensus 276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~----~~~ 351 (401)
T cd05107 276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN----EQF 351 (401)
T ss_pred CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch----HHH
Confidence 99999999998754322 12345678999999988889999999999999999998 66665432100 001
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
...+........+...+..+.+|+.+||..+|.+||++.+|+..|+.+.
T Consensus 352 ~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 YNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111111222233445678999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=332.22 Aligned_cols=245 Identities=19% Similarity=0.176 Sum_probs=199.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|.+++.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.+++.++||||+++++++.+....+||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 577889999999999999995 4688999999975432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
|++|++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999999999964 2357999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --ccccCCCCCCccccc------cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHH
Q 010529 224 --SYSTNLAYTPPEYLK------NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSE 293 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 293 (508)
...||+.|+|||++. +..++.++|||||||++|+|++|+.||....... ....+.... ...+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~ 235 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK----TYNNIMNFQRFLKFPEDPK 235 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH----HHHHHHcCCCccCCCCCCC
Confidence 235889999999986 4567889999999999999999998865432111 011111110 11111123
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+..+.+|+.+||. +|.+|||+.+++.|
T Consensus 236 ~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 236 VSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 56778999999998 99999999999977
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=327.94 Aligned_cols=237 Identities=21% Similarity=0.257 Sum_probs=189.5
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHH-HhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAE-GVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+. .+++.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 579999999999995 4689999999865321 12234555554 467889999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 227 (508)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 9999886 3457899999999999999999999999 999999999999999999999999998753222 23468
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|+|++|..|+........ ...+.... ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM----YDNILNKP--LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH----HHHHHcCC--CCCCCCCCHHHHHHHHHHhh
Confidence 9999999999988899999999999999999999988654311110 11111111 11233446779999999999
Q ss_pred cCCCCCCChH----HHHHH
Q 010529 308 YEPRERPSTK----NLVVT 322 (508)
Q Consensus 308 ~~p~~Rps~~----~il~~ 322 (508)
.||.+||++. +++.+
T Consensus 233 ~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred cCHHhCCCCCCCHHHHHcC
Confidence 9999999985 55544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=323.12 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=203.5
Q ss_pred CcccccccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGD 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 139 (508)
++|.+.+.||+|+||.||++... +...||+|.+..... .....+..|+.++..+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 45788999999999999999842 234699999875432 2345688999999999 8999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~ 205 (508)
..++||||+++++|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+|||++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCC
Confidence 9999999999999999996432 135889999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccch
Q 010529 206 GDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENL 278 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 278 (508)
+.++|+|||++....... ...++..|+|||++.+..++.++||||||+++|+|++ |..|+..... ..+
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-----~~~ 251 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----EEL 251 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHH
Confidence 999999999987554321 1123467999999988889999999999999999998 6655432211 111
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
...+........+...+.++.+|+.+||..+|.+|||+.++++.|..+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 252 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 111122222233445577899999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=320.33 Aligned_cols=256 Identities=19% Similarity=0.222 Sum_probs=205.3
Q ss_pred HHHHHhcCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCC
Q 010529 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139 (508)
Q Consensus 61 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 139 (508)
++.......+.|+++++||.|+||.||+|... ++..|++|.+........+.+.+|+.+++.++||||+++++++..++
T Consensus 3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 44555556677899999999999999999954 58889999987655444567899999999999999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||+++++|..++.. ....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred eEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999887754 3456899999999999999999999999 999999999999999999999999987653
Q ss_pred CCC----CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc-CCC
Q 010529 220 MDG----KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL-EGK 289 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 289 (508)
... ....++..|+|||++. ...++.++||||||+++|+|++|..|+...... ........... ...
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~ 236 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLS 236 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----HHHHHHhcCCCccCC
Confidence 322 2345788999999985 344678999999999999999999775432110 00111111000 111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+...+.++.+++.+||..+|++||++.+++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 233456678999999999999999999999876
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=330.39 Aligned_cols=241 Identities=20% Similarity=0.274 Sum_probs=203.7
Q ss_pred cCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHH
Q 010529 77 ESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAK 155 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~ 155 (508)
+||+|.||+||-|+ ..+...+|||-+........+-+..|+.+.++|+|.|||+++|.|.+++.+-|.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 57999999999999 45566789999987776667789999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCc--ChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEcccCCcccc----CCCCccccC
Q 010529 156 HLFHWEKQTI--EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNS----MDGKSYSTN 228 (508)
Q Consensus 156 ~l~~~~~~~l--~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~----~~~~~~~~t 228 (508)
+|.. .-+++ .+.++--+..||++||.|||++. |||||||..|||++ -.|.+||+|||-++.. ....++.||
T Consensus 662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 9964 55677 77888889999999999999999 99999999999995 6789999999987654 345678999
Q ss_pred CCCCCccccccC--CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 229 LAYTPPEYLKNG--RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 229 ~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
..|||||++..+ .|...+|||||||++.||.||++||.+-...... +..+---...++.|...+.+...+|.+|+
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---MFkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---MFKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---hhhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 999999999764 4888999999999999999999887543211110 11111112345678889999999999999
Q ss_pred ccCCCCCCChHHHHHH
Q 010529 307 QYEPRERPSTKNLVVT 322 (508)
Q Consensus 307 ~~~p~~Rps~~~il~~ 322 (508)
.++|.+||++.++++.
T Consensus 817 epd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 817 EPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcccCccHHHhccC
Confidence 9999999999999987
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=323.83 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=209.4
Q ss_pred cccCCCCcccEEEEEEEcC-----CCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 75 VSESGEKAANVVYKGRLEN-----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
-+.||.|-||.||+|...+ .-.||||..+... ..+.+.|+.|..+|++++|||||+++|+|.+ ...+||||.+
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~ 472 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELA 472 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecc
Confidence 4568999999999999432 3468999998744 3457789999999999999999999999964 5679999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcccc-
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST- 227 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~- 227 (508)
+-|.|..+|.. .+..++......++.||+.||.|||+.. +|||||-..|||+...-.+||+|||+++.......+..
T Consensus 473 ~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 99999999975 5667999999999999999999999999 99999999999999999999999999998877654432
Q ss_pred ----CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 228 ----NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 228 ----t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
..-|||||.+.-..++..+|||-|||++||++. |..||.+ ....++-..+...-+.+.|+.+++.+..|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 356999999998999999999999999999887 5566543 334444444555556677889999999999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+||.++|.+||++.++...|..+..
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999999877654
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=317.80 Aligned_cols=238 Identities=23% Similarity=0.357 Sum_probs=188.3
Q ss_pred cCCCCcccEEEEEEEcC-------------------------CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcce
Q 010529 77 ESGEKAANVVYKGRLEN-------------------------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANL 131 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~ 131 (508)
.||+|+||.||+|.+.. ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999998421 23588898865443334578899999999999999999
Q ss_pred eeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-----
Q 010529 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG----- 206 (508)
Q Consensus 132 ~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~----- 206 (508)
+++|......++||||+++++|..++.. ....+++..+..++.||++||.|||+.+ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999998864 3457899999999999999999999999 99999999999997543
Q ss_pred --CeEEcccCCccccCCCCccccCCCCCCcccccc-CCcCccccchhhHHHHHHHH-hCCCCCCchhhhhhhccchhhhh
Q 010529 207 --DPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLL-SGKHIPPSHALDMIRGENLNLLM 282 (508)
Q Consensus 207 --~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~ell-tg~~~~~~~~~~~~~~~~~~~~~ 282 (508)
.+|++|||++..........++..|+|||.+.+ ..++.++||||||+++|||+ +|+.|+....... .....
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE-----KERFY 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-----HHHHH
Confidence 379999999876555455567888999998865 56789999999999999995 5776543321110 01111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.... ..+......+.+++.+||..+|++|||+.++++.|
T Consensus 235 ~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 235 EKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred Hhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1111 11222345689999999999999999999999887
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=313.83 Aligned_cols=249 Identities=19% Similarity=0.278 Sum_probs=197.8
Q ss_pred ccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCc-----
Q 010529 72 DNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE----- 140 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~----- 140 (508)
|.+.+.||+|+||.||+|.... +..||||+++...... ...+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998532 3679999987543222 3578999999999999999999999876554
Q ss_pred -ceeeeecCCCCCHHHHhhcc----CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 141 -RLLVAEYMPNDTLAKHLFHW----EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 141 -~~lv~E~~~~~sL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
.++||||+++++|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccc
Confidence 79999999999999988532 2246899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCc------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCC
Q 010529 216 MKNSMDGKS------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEG 288 (508)
Q Consensus 216 a~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (508)
++....... ...+..|+|||.+.+..++.++||||||+++|||++ |..|+...... .....+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~ 234 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYDYLRHGNRL 234 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCC
Confidence 876543321 224567999999988889999999999999999999 66554332110 111111111122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
..+...+..+.+++.+||..||.+|||+.++++.|..+
T Consensus 235 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 23445677899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=320.67 Aligned_cols=251 Identities=20% Similarity=0.308 Sum_probs=201.5
Q ss_pred cccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 71 SDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
++.+.+.||.|+||.||++... .+..||||.++..... ..+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 115 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL 115 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence 4677889999999999999741 2457999998754322 235689999999999 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.......+++.++..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||++......
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 194 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMND 194 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence 9999999999999997544445899999999999999999999999 999999999999999999999999998755432
Q ss_pred C------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 K------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
. ...++..|+|||.+.+..++.++||||||+++|+|+| |..|+...... ...............+...+
T Consensus 195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 270 (302)
T cd05055 195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD----SKFYKLIKEGYRMAQPEHAP 270 (302)
T ss_pred CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch----HHHHHHHHcCCcCCCCCCCC
Confidence 2 1234677999999988889999999999999999998 77665432110 11111122111222233346
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
..+.+++.+||..+|++|||+.++++.|..+
T Consensus 271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 7899999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=325.78 Aligned_cols=237 Identities=19% Similarity=0.270 Sum_probs=194.4
Q ss_pred cCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||.|+||.||+|... +++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5799999999999954 57889999997532 22345678899999888 7999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|..++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999864322 123468
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
++.|+|||++.+..++.++|||||||++|+|++|+.||........ ...+... ....+...+..+.+|+.+||.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL----FQSILED--EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH----HHHHHcC--CCCCCCcCCHHHHHHHHHHcc
Confidence 8999999999988999999999999999999999988653321111 1111111 112233456789999999999
Q ss_pred cCCCCCCCh-----HHHHHH
Q 010529 308 YEPRERPST-----KNLVVT 322 (508)
Q Consensus 308 ~~p~~Rps~-----~~il~~ 322 (508)
.||.+|||+ .+++.+
T Consensus 233 ~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 999999999 888776
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=320.88 Aligned_cols=251 Identities=18% Similarity=0.241 Sum_probs=207.0
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
...+....|.+++.||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..+...+
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 13 SVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred ccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence 3345557788999999999999999994 578999999997665555677899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 93 VVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred EeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 9999999999999984 356889999999999999999999999 999999999999999999999999998754433
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh-ccccCCCCCHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM-DSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 297 (508)
....+++.|+|||.+.+..++.++||||||+++|+|++|..|+...... ....... ........+...+..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 244 (297)
T cd06656 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQNPERLSAV 244 (297)
T ss_pred ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc----hheeeeccCCCCCCCCccccCHH
Confidence 2345788999999998888899999999999999999999876432110 0000000 011111123445677
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+++.+||..+|++|||+.+++.+
T Consensus 245 ~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 245 FRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 8999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=316.93 Aligned_cols=253 Identities=21% Similarity=0.320 Sum_probs=199.7
Q ss_pred ccccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC--Cccee
Q 010529 72 DNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLL 143 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~l 143 (508)
|++++.||+|+||.||++.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 57789999999999999984 3477899999875432 2245799999999999999999999998765 56789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||++|++|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999854 2346899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccc---hhhhhcccc
Q 010529 224 -------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GEN---LNLLMDSHL 286 (508)
Q Consensus 224 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~---~~~~~~~~~ 286 (508)
...++..|+|||++.+..++.++||||||+++|+|+|+..|.......... ... ....+....
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 234566799999998888999999999999999999987553221110000 000 000111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
....+...+..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1122334567899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=313.36 Aligned_cols=246 Identities=16% Similarity=0.195 Sum_probs=200.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-----ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-----DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.|.+.+.||.|++|.||+|.. .+++.||+|.+...... ....+.+|+.++++++||||+++++++......++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 456778889999999999994 56889999998654321 134688999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 83 MEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 999999999999863 456889999999999999999999999 999999999999999999999999998654322
Q ss_pred -----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 -----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
....++..|+|||++.+..++.++||||||+++|+|++|+.|+..... ................+...+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFKIATQPTNPQLPSHVSPD 235 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHHHhccCCCCCCCccCCHH
Confidence 234567889999999988899999999999999999999977543210 00011111111223344456778
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+++.+||..+|.+|||+.+++.+.
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 99999999999999999999999764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=332.23 Aligned_cols=253 Identities=19% Similarity=0.175 Sum_probs=200.8
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCC
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 139 (508)
.......+|.+++.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++..+.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445578899999999999999999954 58889999986422 122345789999999999999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||++|++|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 9999999999999999985 345889999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CccccCCCCCCccccccC----CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCC
Q 010529 220 MDG-----KSYSTNLAYTPPEYLKNG----RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEG 288 (508)
Q Consensus 220 ~~~-----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 288 (508)
... ....||+.|+|||++.+. .++.++|||||||++|||++|..||...... .....++... ...
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~ 268 (371)
T cd05622 193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMNHKNSLTF 268 (371)
T ss_pred CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCcccC
Confidence 432 245689999999998653 3788999999999999999999887543211 0111111111 111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCC--CCChHHHHHHHH
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRE--RPSTKNLVVTLA 324 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~~il~~L~ 324 (508)
......+..+.+++.+||..++.+ |+++.++++|.+
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 112245778899999999844443 789999998864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=312.11 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=204.7
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
++|.+.+.||.|+||.||+|...++..||||.+.... .....+.+|+.++++++|+||+++++++......++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 4567889999999999999998788889999987543 345689999999999999999999999988889999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----c
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----S 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~ 224 (508)
+++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 999999997655567999999999999999999999999 9999999999999999999999999987654321 1
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...+..|+|||.+.+..++.++||||||+++++|+| |+.|+...... .....+. .......+...+..+.+++.
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~i~ 238 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR----EVLEQVE-RGYRMPRPPNCPEELYDLML 238 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH-cCCCCCCCCCCCHHHHHHHH
Confidence 223567999999988889999999999999999999 77665432111 0111111 11111223334678999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||..+|.+||++.++++.|+.
T Consensus 239 ~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 239 QCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHcccCcccCCCHHHHHHHHhc
Confidence 9999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=309.73 Aligned_cols=241 Identities=23% Similarity=0.353 Sum_probs=196.1
Q ss_pred cCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHH
Q 010529 77 ESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAK 155 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~ 155 (508)
.||.|+||.||+|...++..||+|.+....... ...+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 579999999999998788899999987544222 3468899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----ccccCCC
Q 010529 156 HLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----SYSTNLA 230 (508)
Q Consensus 156 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~~t~~ 230 (508)
++.. ....+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++....... ...++..
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 8864 3346889999999999999999999999 9999999999999999999999999987543321 1233567
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYE 309 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 309 (508)
|+|||++.++.++.++||||||+++|++++ |..|+........ ...+........+...+..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-----REQVEKGYRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999988889999999999999999999 7766543221111 1111111122233445678999999999999
Q ss_pred CCCCCChHHHHHHHH
Q 010529 310 PRERPSTKNLVVTLA 324 (508)
Q Consensus 310 p~~Rps~~~il~~L~ 324 (508)
|++|||+.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=312.78 Aligned_cols=246 Identities=17% Similarity=0.196 Sum_probs=203.0
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++.+.||.|+||.||++.. .++..||+|.++... ....+.+.+|+.+++.++|+||+++++.+..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 367889999999999999995 468889999986432 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 9999999886545567899999999999999999999999 999999999999999999999999998755432 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..+++.|+|||++.+..++.++||||||+++|+|++|..|+........ ...+ ........+...+..+.+|+.+
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~li~~ 234 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL----ILKV-CQGSYKPLPSHYSYELRSLIKQ 234 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH----HHHH-hcCCCCCCCcccCHHHHHHHHH
Confidence 4678899999999888899999999999999999999988654321111 0111 1111122344556779999999
Q ss_pred hcccCCCCCCChHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~ 322 (508)
||..||++|||+.+++..
T Consensus 235 ~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 235 MFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhCCcccCCCHHHHhhc
Confidence 999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=322.28 Aligned_cols=254 Identities=20% Similarity=0.293 Sum_probs=202.2
Q ss_pred CcccccccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGD 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 139 (508)
.+|.+.+.||.|+||.||+|+.. ++..||+|.+..... .....+.+|+.+++.+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 45677889999999999999741 245799999865432 2345789999999999 8999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~ 205 (508)
..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~ 173 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTEN 173 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCC
Confidence 9999999999999999996432 235788899999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccch
Q 010529 206 GDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENL 278 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 278 (508)
+.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..|+....... +
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~ 248 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----L 248 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----H
Confidence 999999999987654321 1234567999999988889999999999999999998 555543221111 1
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
...+........+...+..+.+|+.+||..+|.+|||+.++++.|..+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 249 FKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 111111111222345567899999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=316.19 Aligned_cols=248 Identities=19% Similarity=0.281 Sum_probs=198.1
Q ss_pred cccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.|.+++.||+|++|.||+|.+. .+..|++|.+....... ...|.+|+.+++.++|+||+++++++.+....++
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI 86 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence 4677889999999999999964 35678999886443222 3469999999999999999999999998889999
Q ss_pred eeecCCCCCHHHHhhccCC-----CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC---CeEEcccCC
Q 010529 144 VAEYMPNDTLAKHLFHWEK-----QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG---DPRLSCFGL 215 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~Dfg~ 215 (508)
||||++|++|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .+||+|||+
T Consensus 87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~ 165 (277)
T cd05036 87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCcc
Confidence 9999999999999864321 25899999999999999999999999 99999999999998654 599999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCC
Q 010529 216 MKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEG 288 (508)
Q Consensus 216 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (508)
++...... ....+..|+|||++.+..++.++|||||||++|+|++ |..|+...... .....+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~ 240 (277)
T cd05036 166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-----EVMEFVTGGGRL 240 (277)
T ss_pred ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcC
Confidence 88653321 1122457999999988889999999999999999997 77665432111 111112212222
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+...+..+.+++.+||..+|++|||+.+++++|.
T Consensus 241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 334455678999999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=312.81 Aligned_cols=248 Identities=20% Similarity=0.298 Sum_probs=193.8
Q ss_pred cccccCCCCcccEEEEEEEcC-CC--EEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeC------Ccc
Q 010529 73 NIVSESGEKAANVVYKGRLEN-RQ--WIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DER 141 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~~ 141 (508)
.+.+.||+|+||.||+|.+.+ +. .||||.++.... ...+.+.+|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 356788999999999999654 33 589998865422 2245788999999999999999999987532 246
Q ss_pred eeeeecCCCCCHHHHhhcc----CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 142 LLVAEYMPNDTLAKHLFHW----EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
++||||+.+++|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999887421 2345899999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCC
Q 010529 218 NSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKF 290 (508)
Q Consensus 218 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
...... ...+++.|++||++.+..++.++||||||+++|+|++ |+.|+...... .....+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 235 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-----EIYDYLRQGNRLKQ 235 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCCCCC
Confidence 654322 2234667999999988889999999999999999999 66555432110 01111111111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+...+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 334567799999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=318.52 Aligned_cols=250 Identities=20% Similarity=0.243 Sum_probs=201.2
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|++.+.||+|+||.||++.. .+++.||||.+....... ...+.+|+.+++.++|+||+.+++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 45567789999999999995 468899999986543222 24578899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---c
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---S 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 224 (508)
++|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 99999999886544556999999999999999999999999 9999999999999999999999999987554332 3
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..|+..|+|||++.+..++.++||||||+++|+|++|+.|+........ .......... .....+...+..+.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKE-VQEEYSEKFSPDARSLCKM 238 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHhhhhh-hhhhcCccCCHHHHHHHHH
Confidence 4678999999999988899999999999999999999988654211000 0011111111 1112233456778999999
Q ss_pred hcccCCCCCCC-----hHHHHHHHH
Q 010529 305 CLQYEPRERPS-----TKNLVVTLA 324 (508)
Q Consensus 305 cl~~~p~~Rps-----~~~il~~L~ 324 (508)
||+.||.+||| +.+++.|-+
T Consensus 239 ~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 239 LLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred HhhcCHHHccCCCCCchHHHHcChh
Confidence 99999999999 889998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=333.51 Aligned_cols=244 Identities=16% Similarity=0.138 Sum_probs=195.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|++++.||+|+||.||+|.. .+++.||||++.... ......+..|+.++..++||||+++++.+.+.+..+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 577889999999999999995 468899999996432 2234568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999986 3457899999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCc
Q 010529 223 -----------------------------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPS 267 (508)
Q Consensus 223 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 267 (508)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 124689999999999988999999999999999999999988754
Q ss_pred hhhhhhhccchhhhhccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---hHHHHHH
Q 010529 268 HALDMIRGENLNLLMDSHLEGKFS--SEEATQVVGLASQCLQYEPRERPS---TKNLVVT 322 (508)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~~p~~Rps---~~~il~~ 322 (508)
...... ...+........++ ...+.++.+|+.+|+. ||.+|++ +.+++.|
T Consensus 239 ~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQET----YRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHH----HHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 321111 11111100000111 1245678888888774 9999985 6777766
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=317.78 Aligned_cols=251 Identities=18% Similarity=0.250 Sum_probs=206.3
Q ss_pred HhcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 65 ATNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 65 ~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.......|++++.||.|++|.||+|. ..+++.|++|.+........+.+.+|+.+++.++||||+++++++......++
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 14 IGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred cCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEE
Confidence 33445568899999999999999999 46788999999976655556788999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+++++|..++. ...+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 94 v~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 94 VMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 999999999999884 446899999999999999999999999 999999999999999999999999988754433
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc-cccCCCCCHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 298 (508)
....++..|+|||.+.+..++.++|||||||++|+|++|+.|+...... .....+.. .......+...+..+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQNPEKLSPIF 245 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCcccCCcccCCHHH
Confidence 2345788999999998888899999999999999999999876432110 00001110 000111233456779
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+++.+||..||.+|||+.+++.+=
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhCh
Confidence 9999999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=324.94 Aligned_cols=253 Identities=19% Similarity=0.275 Sum_probs=198.3
Q ss_pred cccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC-Ccc
Q 010529 71 SDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG-DER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~-~~~ 141 (508)
+|++.+.||.|+||.||+|.. .+++.||||+++..... ....+.+|+.++.++ +||||++++++|... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 578899999999999999973 34678999999754322 234688999999999 789999999988654 457
Q ss_pred eeeeecCCCCCHHHHhhccC------------------------------------------------------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 161 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~------------------------------------------------------------ 161 (508)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986421
Q ss_pred -----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC------ccccCCC
Q 010529 162 -----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK------SYSTNLA 230 (508)
Q Consensus 162 -----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~ 230 (508)
...+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||+|||++....... ...++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 123678889999999999999999999 9999999999999999999999999987543221 1234567
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYE 309 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 309 (508)
|+|||++.+..++.++||||||+++|+|++ |..|++..... ......+........+...++.+.+++.+||+.+
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc----HHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 77665432110 0011111111111222234567899999999999
Q ss_pred CCCCCChHHHHHHHHHhhc
Q 010529 310 PRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 310 p~~Rps~~~il~~L~~~~~ 328 (508)
|.+|||+.+|+++|+.+..
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=316.51 Aligned_cols=247 Identities=17% Similarity=0.197 Sum_probs=198.8
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
|++++.||.|+||.||+|... ++..+++|.+..........+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567889999999999999954 4778899988655444456789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 226 (508)
++|..++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999888753 3457899999999999999999999999 999999999999999999999999998654322 3346
Q ss_pred cCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc-ccCCCCCHHHHHHHHH
Q 010529 227 TNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS-HLEGKFSSEEATQVVG 300 (508)
Q Consensus 227 ~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 300 (508)
++..|+|||++. +..++.++|||||||++|+|++|+.|+...... ......... ......+...+..+.+
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLAQPSRWSSEFKD 240 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH----HHHHHHhhcCCCCCCCccccCHHHHH
Confidence 788999999984 345778999999999999999999775432110 000011100 0011123345678999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
++.+||..+|.+|||+.+++++-.
T Consensus 241 li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 241 FLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred HHHHHccCChhhCcCHHHHhcCCC
Confidence 999999999999999999987743
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=318.04 Aligned_cols=250 Identities=18% Similarity=0.201 Sum_probs=192.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccC---CCCCCcceeeeeeeC-----C
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKL---RRKRLANLIGYCCAG-----D 139 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~nIv~~~~~~~~~-----~ 139 (508)
.|++++.||+|+||.||+|+. .+++.||+|.++...... ...+.+|+.+++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 367889999999999999995 468899999987543222 23566788777665 799999999988642 3
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccc
Confidence 5789999997 58988886544556899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch-------hhhhcc-----
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL-------NLLMDS----- 284 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-------~~~~~~----- 284 (508)
... ....+|..|+|||++.+..++.++|||||||++|+|++|++|+............. ...+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 433 23467889999999988889999999999999999999997764321110000000 000000
Q ss_pred --ccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 --HLE-------GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 --~~~-------~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
... .......+..+.+++.+||+.||.+|||+.+++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 00112345678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=313.78 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=200.3
Q ss_pred CcccccccCCCCcccEEEEEEEcC-C---CEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN-R---QWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
+++++.+.||+|+||.||+|.... + ..||||.+..... .....|..|+.+++.++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 456788899999999999999543 3 3699999865422 2245799999999999999999999999988999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS 224 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 224 (508)
|||+++++|.+++.. ....+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999864 3456899999999999999999999999 99999999999999999999999999875433211
Q ss_pred ---c----cc--CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHH
Q 010529 225 ---Y----ST--NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 225 ---~----~~--t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (508)
. .+ +..|+|||++.+..++.++||||||+++|||++ |..|+...... .....+........+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQDYRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCcCCCcccC
Confidence 1 11 346999999988889999999999999999887 88766432111 111111111122223445
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=316.65 Aligned_cols=248 Identities=19% Similarity=0.229 Sum_probs=198.7
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|+..+.||.|+||+||+|.. .+++.||+|.+...... ....+.+|+++++.++|+||+.+++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 34567789999999999995 56889999998654322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Cc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KS 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~ 224 (508)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 99999998886544557999999999999999999999999 999999999999999999999999998654332 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..|+..|+|||++.+..++.++||||||+++|+|++|..|+....... ....+...+... ....+...+..+.+|+.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~ 238 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDRRVLET-EEVYSAKFSEEAKSICKM 238 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhhcc-ccccCccCCHHHHHHHHH
Confidence 467899999999988889999999999999999999998765321110 001111111110 112233456678999999
Q ss_pred hcccCCCCCCC-----hHHHHHH
Q 010529 305 CLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps-----~~~il~~ 322 (508)
||..||.+||+ +.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 239 LLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HccCCHhHcCCCcccChHHHHcC
Confidence 99999999999 6777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=315.33 Aligned_cols=248 Identities=21% Similarity=0.237 Sum_probs=198.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
++++++.||.|+||.||+|.. .+++.||+|.+...... ....+.+|+.++++++||||+++++++......++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 467888999999999999994 56889999998654322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Cccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYS 226 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~~ 226 (508)
++++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 999996543 4688899999999999999999999 999999999999999999999999998755433 3456
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh--c-cchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR--G-ENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
++..|+|||++.+..++.++||||||+++|+|++|+.|+......... . ...................+.++.+++.
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence 889999999999888999999999999999999999876432100000 0 0001111111111112234567899999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||..+|.+||++.+++.+.+-
T Consensus 235 ~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 235 QCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred HHhhCChhhCCCHHHHhcCccc
Confidence 9999999999999999987443
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=317.86 Aligned_cols=248 Identities=20% Similarity=0.255 Sum_probs=197.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
+-..|+++++||+||.+.||++...+.+.+|+|++...... ...-|..|+..|.+| .|.+||++++|-..++.+|||
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34568999999999999999999888788898887644322 245799999999999 799999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
|||-+ -+|..+|.........| .+..+..|++.++.++|.+| |||.||||.|+|+- .|.+||+|||+|......+
T Consensus 439 mE~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 439 MECGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred eeccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 99974 78999997543333334 77889999999999999999 99999999999986 5799999999998776653
Q ss_pred -----ccccCCCCCCccccccC-----------CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC
Q 010529 224 -----SYSTNLAYTPPEYLKNG-----------RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
+.+||+.||+||.+... +.++++|||||||+||+|+.|+.||. +.... ...+..+.++...
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~-~~~n~--~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG-QIINQ--IAKLHAITDPNHE 591 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH-HHHHH--HHHHHhhcCCCcc
Confidence 45799999999998532 36789999999999999999997653 22211 1223344444332
Q ss_pred CCCCHHH-HHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 288 GKFSSEE-ATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 288 ~~~~~~~-~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
-+++.-. ..++.++|..||..||.+|||+.++|++
T Consensus 592 Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 592 IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2332211 2239999999999999999999999976
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=310.25 Aligned_cols=246 Identities=19% Similarity=0.299 Sum_probs=191.7
Q ss_pred cCCCCcccEEEEEEEcC----CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeee-eCCcceeeeecCCC
Q 010529 77 ESGEKAANVVYKGRLEN----RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCC-AGDERLLVAEYMPN 150 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~-~~~~~~lv~E~~~~ 150 (508)
.||+|+||.||+|.+.+ +..||+|.+..... .....+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 57999999999998532 45699998854321 23457889999999999999999999876 45568999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--------
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-------- 222 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-------- 222 (508)
++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999864 2345678888999999999999999999 999999999999999999999999998754321
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
....++..|+|||.+.+..++.++||||||+++|||++|..|+....... .....+........+...+..+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 235 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF----DITVYLLQGRRLLQPEYCPDPLYEVM 235 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhcCCCCCCCCcCCHHHHHHH
Confidence 12234667999999988889999999999999999999765543321110 01111111111112233456799999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+||..+|++||++.+++..|+.+..
T Consensus 236 ~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 236 LSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 99999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=315.46 Aligned_cols=249 Identities=20% Similarity=0.312 Sum_probs=199.9
Q ss_pred CcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
++|.+++.||.|+||.||+|...+ +..||+|.+..... .....+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 456788999999999999998542 36799999864432 22346889999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC--------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcc
Confidence 9999999999999986422 234788999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccC
Q 010529 215 LMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 215 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
+++..... ....++..|+|||.+.++.++.++||||||+++|||+| |..|+....... ....+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~ 239 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----VLKFVIDGGH 239 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----HHHHHhcCCC
Confidence 98754332 22345678999999988889999999999999999998 776654321110 1111111112
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
...+...+..+.+++.+||..+|++|||+.+++..|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 2234445788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=336.93 Aligned_cols=251 Identities=18% Similarity=0.209 Sum_probs=189.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCC------CCCcceeeeeeeC-Ccc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR------KRLANLIGYCCAG-DER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~~~~~~~~~-~~~ 141 (508)
..|.+++.||+|+||.||+|.. .+++.||||+++... .....+..|+.++..++| .+|+++++++... ...
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 4678899999999999999995 568889999996432 223456667777766654 4588888888654 568
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCC--------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDG-------------- 206 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~-------------- 206 (508)
++|||++ |++|.+++. ....+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred EEEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCC
Confidence 9999998 788988886 34579999999999999999999998 48 99999999999998665
Q ss_pred --CeEEcccCCccccCC-CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh----h---hcc
Q 010529 207 --DPRLSCFGLMKNSMD-GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM----I---RGE 276 (508)
Q Consensus 207 --~~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----~---~~~ 276 (508)
.+||+|||.+..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....... + .+.
T Consensus 284 ~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~ 363 (467)
T PTZ00284 284 PCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR 363 (467)
T ss_pred CceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC
Confidence 499999998764332 245678999999999999999999999999999999999998875421100 0 000
Q ss_pred ------------chhhhhccc--cCCCCC---------------HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 277 ------------NLNLLMDSH--LEGKFS---------------SEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 277 ------------~~~~~~~~~--~~~~~~---------------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
....++... +..... ......+.+||.+||..||.+|||+.|+++|-+-
T Consensus 364 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 364 LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred CCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 000000000 000000 0113567899999999999999999999998443
|
|
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=313.24 Aligned_cols=246 Identities=18% Similarity=0.225 Sum_probs=195.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeC------Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAG------DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~------~~~~ 142 (508)
.|.+.+.||.|+||.||+|.. .+++.||+|.+.... .....+..|+.++.++ +||||+++++++... ...+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 346677889999999999995 458889999986543 3456789999999998 799999999998753 3578
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+.+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 9999999999999987644567899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 223 ----KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
....|+..|+|||++. +..++.++|||||||++|+|++|+.|+...... ..................
T Consensus 165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~ 240 (272)
T cd06637 165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLIPRNPAPRLKSKK 240 (272)
T ss_pred cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HHHHHHhcCCCCCCCCCC
Confidence 3356788999999986 345788999999999999999999876432110 000011111111112223
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+..+.+|+.+||..+|.+|||+.+++.+
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 241 WSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 45679999999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=324.65 Aligned_cols=232 Identities=20% Similarity=0.263 Sum_probs=186.4
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHH-HhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAE-GVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||.|+||.||+|+. .+++.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 4588999999864321 12334555554 578889999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 9998885 3456889999999999999999999999 99999999999999999999999999875322 123468
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|||++|..|+........ ...+.... ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM----YDNILHKP--LQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH----HHHHhcCC--CCCCCCCCHHHHHHHHHHcc
Confidence 8999999999888899999999999999999999988654321111 11111111 12333456778999999999
Q ss_pred cCCCCCCChH
Q 010529 308 YEPRERPSTK 317 (508)
Q Consensus 308 ~~p~~Rps~~ 317 (508)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=323.88 Aligned_cols=236 Identities=19% Similarity=0.243 Sum_probs=191.9
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeeee
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~E 146 (508)
|++++.||.|+||.||+|.. .+++.||||++.... ....+.+..|..++..+. |++|+++++++...+..|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 46678889999999999995 568899999987532 223456788999998885 5778889999988889999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++. ....+++.++..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence 999999999886 3457999999999999999999999999 999999999999999999999999998753322
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
....||+.|+|||++.+..++.++|||||||++|+|+||+.|+...... .....+.... ...+...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i~~~~--~~~p~~~~~~~~~li 232 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED----ELFQSIMEHN--VSYPKSLSKEAVSIC 232 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHHhCC--CCCCccCCHHHHHHH
Confidence 2346899999999998888999999999999999999999876543211 1111111111 123444567889999
Q ss_pred HHhcccCCCCCCCh
Q 010529 303 SQCLQYEPRERPST 316 (508)
Q Consensus 303 ~~cl~~~p~~Rps~ 316 (508)
.+||..+|.+|++.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05615 233 KGLMTKHPSKRLGC 246 (323)
T ss_pred HHHcccCHhhCCCC
Confidence 99999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=326.27 Aligned_cols=235 Identities=18% Similarity=0.231 Sum_probs=188.2
Q ss_pred ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHH-HhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAE-GVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.||.|+||.||+|+. .+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3579999999999994 5689999999865321 22335556655 46778999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~ 226 (508)
++|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 ~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence 99998886 4557899999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
||+.|+|||++.+..++.++|||||||++|+|++|..|+........ ...+..... ..+...+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~ll~~ll 231 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM----YDNILHKPL--VLRPGASLTAWSILEELL 231 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH----HHHHHcCCc--cCCCCCCHHHHHHHHHHh
Confidence 89999999999988899999999999999999999988654321111 111111111 122235667889999999
Q ss_pred ccCCCCCCChHHH
Q 010529 307 QYEPRERPSTKNL 319 (508)
Q Consensus 307 ~~~p~~Rps~~~i 319 (508)
..+|.+||++.+.
T Consensus 232 ~~~p~~R~~~~~~ 244 (325)
T cd05604 232 EKDRQRRLGAKED 244 (325)
T ss_pred ccCHHhcCCCCCC
Confidence 9999999988643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=319.88 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=199.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
....|.+++.||.|+||.||+|+. .++..||+|.++..... ....+.+|+.++++++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 345688999999999999999995 45788999998754322 2346889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 84 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLD-KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 9997 588888754 3446889999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhhhccc--------
Q 010529 223 -KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLLMDSH-------- 285 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~~~~~-------- 285 (508)
....+++.|+|||++.+ ..++.++||||||+++|+|+||+.||......... +......+...
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 23456889999999865 45788999999999999999999877543211000 00000000000
Q ss_pred --cCC-------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 286 --LEG-------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 286 --~~~-------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
... ......+.++.+|+.+||..||.+|||+.+++.+-+-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 000 0011245678899999999999999999999987543
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=310.91 Aligned_cols=247 Identities=20% Similarity=0.233 Sum_probs=187.9
Q ss_pred ccCCCCcccEEEEEEEcC---CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 76 SESGEKAANVVYKGRLEN---RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
+.||+|+||.||+|.+.+ +..+|+|.++..... ....+.+|+.+++.++||||+++++++.+....++||||++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 357999999999998543 456899988755432 2347889999999999999999999999888999999999999
Q ss_pred CHHHHhhccC---CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------
Q 010529 152 TLAKHLFHWE---KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------ 222 (508)
Q Consensus 152 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------ 222 (508)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999986422 234667788899999999999999999 999999999999999999999999998654332
Q ss_pred CccccCCCCCCccccccC-------CcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHH
Q 010529 223 KSYSTNLAYTPPEYLKNG-------RVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~-------~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (508)
....++..|+|||++.+. .++.++||||||+++|||++ |..|+......................+......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 123456789999998632 35789999999999999996 8877643211111000000000111111122234
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+..+.+++..|| .+|++|||+.+|+..|.
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 567889999999 68999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=312.17 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=199.4
Q ss_pred cccccccCCCCcccEEEEEEEc-CC---CEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NR---QWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.|...+.||+|+||.||+|... ++ ..++||.+..... .....+..|+++++.++||||+++++++...+..++||
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT 85 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence 3455677899999999999964 33 3689999865432 22457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc-
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS- 224 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 224 (508)
||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 86 EYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 99999999999864 3457899999999999999999999999 99999999999999999999999999875543211
Q ss_pred ------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 225 ------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 225 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...+..|+|||++.+..++.++||||||+++|||++ |..|+...... .....+......+.+...+..
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~ 238 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKAINDGFRLPAPMDCPSA 238 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHHHhcCCCCCCCCCCCHH
Confidence 112346999999988889999999999999999998 88776432111 111111111122223345678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+.+++.+||..+|++||++.++++.|+.+
T Consensus 239 ~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 239 VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=309.39 Aligned_cols=248 Identities=19% Similarity=0.276 Sum_probs=201.3
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
..|.+.+.||+|+||.||++...++..+++|.+.... .....+.+|+.+++.++|+||+++++++.. ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 3567889999999999999997777779999886432 234679999999999999999999999877 77899999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----c
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----S 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~ 224 (508)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 999999997545566889999999999999999999999 9999999999999999999999999987554322 1
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..++..|+|||++.+..++.++||||||+++|+++| |..|+........ ...+........+...+.++.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRMPRPENCPEELYNIMM 237 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhCCCCCCCcccCCHHHHHHHH
Confidence 223567999999988889999999999999999999 7766543211111 1111111111223345678999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||..+|++||++.+++..|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 238 RCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=309.23 Aligned_cols=243 Identities=27% Similarity=0.370 Sum_probs=200.3
Q ss_pred ccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.||.|+||.||+|.... +..|+||.+....... ...+.+|++.+..++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 357999999999999543 7789999997655433 56899999999999999999999999998999999999999
Q ss_pred CCHHHHhhccC-------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 151 DTLAKHLFHWE-------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 151 ~sL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
++|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999997531 367999999999999999999999999 999999999999999999999999998866543
Q ss_pred -----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhC-CCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 223 -----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG-KHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
....++..|+|||.+.+..++.++||||||+++|+|+++ ..|+...... .....+........+...+.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-----EVLEYLRKGYRLPKPEYCPD 234 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCccCCh
Confidence 234567889999999888899999999999999999995 6555432111 11111111122233445578
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
++.+++.+||..+|.+|||+.+++.+|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 8999999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=324.78 Aligned_cols=241 Identities=19% Similarity=0.241 Sum_probs=192.8
Q ss_pred cCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|.. .+++.||||++...... ....+..|+.++.++ +||||+++++++...+..|+||||++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999995 55788999999754322 234588999999888 7999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 9998885 3457999999999999999999999999 99999999999999999999999999875322 134568
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-hc-c-chhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-RG-E-NLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
|+.|+|||++.+..++.++|||||||++|+|+||+.||........ .. . ....+... ....+...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 9999999999988999999999999999999999988742110000 00 0 01111111 112344456778999999
Q ss_pred hcccCCCCCCCh------HHHHHH
Q 010529 305 CLQYEPRERPST------KNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~------~~il~~ 322 (508)
||..||.+|+++ .+++.|
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcC
Confidence 999999999985 466555
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=318.76 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=201.0
Q ss_pred cccccccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc
Q 010529 71 SDNIVSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE 140 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 140 (508)
++.+.+.||+|+||.||+|... ....||+|.++.... .....+..|+.+++.+ +||||++++++|...+.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP 92 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence 4567899999999999999742 245689999875432 2245688999999999 69999999999998889
Q ss_pred ceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~ 206 (508)
.++||||+++++|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 171 (314)
T cd05099 93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDN 171 (314)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCC
Confidence 999999999999999996432 235889999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchh
Q 010529 207 DPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLN 279 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 279 (508)
.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..|+...... ...
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-----~~~ 246 (314)
T cd05099 172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE-----ELF 246 (314)
T ss_pred cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence 99999999997654321 1123457999999988889999999999999999999 66655332111 011
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
..+........+...+.++.+++.+||..+|.+|||+.++++.|..+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 247 KLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11111111223344567899999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=318.04 Aligned_cols=253 Identities=19% Similarity=0.251 Sum_probs=200.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++++.||.|+||.||++.. .++..+|+|.+...... ...++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 578889999999999999995 45888999988654221 2346889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Ccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSY 225 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~ 225 (508)
+|++|.+++.. ...+++..+..++.|++.||.|||+. + ++|+||||+|||++.++.++|+|||++...... ...
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999999963 36689999999999999999999984 7 999999999999999999999999998754332 345
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh---ccchh-----------------------
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR---GENLN----------------------- 279 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~~~~~----------------------- 279 (508)
.++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... .....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 6788999999998888899999999999999999999876532111000 00000
Q ss_pred --hhhcccc---CCCCC-HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 280 --LLMDSHL---EGKFS-SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 280 --~~~~~~~---~~~~~-~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
...+... .+..+ ...+.++.+|+.+||..+|++|||+.+++++.+-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~ 291 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK 291 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 0000000 00011 12456799999999999999999999999986543
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=311.08 Aligned_cols=250 Identities=21% Similarity=0.266 Sum_probs=200.4
Q ss_pred CcccccccCCCCcccEEEEEEEc-C---CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-N---RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+|++.+.||.|+||.||+|... + +..+|+|.++..... ....+.+|+.+++.++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45678889999999999999853 2 336899998654322 245789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS 224 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 224 (508)
|||+++++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999964 3356899999999999999999999999 99999999999999999999999999876544321
Q ss_pred -------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 225 -------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 225 -------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
..++..|++||++.+..++.++||||||+++|++++ |..|+....... ....+ ........+...+.
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----~~~~~-~~~~~~~~~~~~~~ 236 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD----VIKAI-EEGYRLPAPMDCPA 236 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH----HHHHH-hCCCcCCCCCCCCH
Confidence 112457999999988889999999999999999887 887754321110 01111 11111222334567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+.+++.+||+.+|.+|||+.++++.|..+
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=315.05 Aligned_cols=255 Identities=23% Similarity=0.348 Sum_probs=203.5
Q ss_pred CcccccccCCCCcccEEEEEEEc-----CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeee--CCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-----NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~ 141 (508)
..+++++.||+|+||.||+|.+. ++..||||.+...... ....|.+|+++++.+.||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677889999999999999853 3678999999765433 35689999999999999999999999877 5578
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+.....
T Consensus 84 ~lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 999999999999999964 2335999999999999999999999999 99999999999999999999999999886653
Q ss_pred CCc-------cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh----------ccchhhhhcc
Q 010529 222 GKS-------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR----------GENLNLLMDS 284 (508)
Q Consensus 222 ~~~-------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~----------~~~~~~~~~~ 284 (508)
... ..++..|++||.+.+..++.++||||||+++|+|+||..|+......... .......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 211 22345699999998888999999999999999999999775432111100 0001111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
......+..++.++.+|+.+||..+|.+|||+.+|++.|..+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 122222334567899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=309.67 Aligned_cols=247 Identities=25% Similarity=0.356 Sum_probs=199.9
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+.+|.+.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++||||+++++++... ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 45678889999999999999975 56679999986432 346789999999999999999999998654 579999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYST 227 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~ 227 (508)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 9999999997544556899999999999999999999999 999999999999999999999999998754433 22234
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
+..|+|||.+.+..++.++||||||+++|+|++ |..|+....... ....+........+...+..+.+++.+||
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l 234 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----VKECVEKGYRMEPPEGCPADVYVLMTSCW 234 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHHhCCCCCCCCCcCCHHHHHHHHHHc
Confidence 567999999988889999999999999999998 776654322111 11111111222233445678999999999
Q ss_pred ccCCCCCCChHHHHHHHHH
Q 010529 307 QYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 307 ~~~p~~Rps~~~il~~L~~ 325 (508)
..+|..||++.+++..|+.
T Consensus 235 ~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 235 ETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCChhhCcCHHHHHHHHcc
Confidence 9999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=309.17 Aligned_cols=243 Identities=20% Similarity=0.252 Sum_probs=195.9
Q ss_pred ccCCCCcccEEEEEEEcC--CC--EEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLEN--RQ--WIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.||.|++|.||+|.+.+ ++ .||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 357999999999999643 33 589999977654 345689999999999999999999999987 888999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-------
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK------- 223 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~------- 223 (508)
++|.+++.......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 99999997543357899999999999999999999999 9999999999999999999999999987654421
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...++..|+|||++.+..++.++||||||+++|+|+| |..|+....... ....+.........+...+..+.+++
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 234 (257)
T cd05040 159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ----ILKKIDKEGERLERPEACPQDIYNVM 234 (257)
T ss_pred CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHhcCCcCCCCccCCHHHHHHH
Confidence 2345678999999988889999999999999999999 887653211100 00111101111122334567899999
Q ss_pred HHhcccCCCCCCChHHHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+||..+|.+|||+.++++.|.
T Consensus 235 ~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 235 LQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHCCCCcccCCCHHHHHHHhc
Confidence 9999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=322.98 Aligned_cols=236 Identities=21% Similarity=0.253 Sum_probs=188.2
Q ss_pred cCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHH-HhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAE-GVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|+.. +++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 5799999999999954 578899999865321 12234444444 567889999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----CCcccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD----GKSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 227 (508)
+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 9999886 3456888899999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
|+.|+|||++.+..++.++|||||||++|+|++|..||........ ...+.... ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNKP--LQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH----HHHHHhCC--cCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999988754321110 11111111 11233456779999999999
Q ss_pred cCCCCCCChHHHHH
Q 010529 308 YEPRERPSTKNLVV 321 (508)
Q Consensus 308 ~~p~~Rps~~~il~ 321 (508)
.||.+||++.+.+.
T Consensus 233 ~~p~~R~~~~~~~~ 246 (325)
T cd05602 233 KDRTKRLGAKDDFM 246 (325)
T ss_pred cCHHHCCCCCCCHH
Confidence 99999999875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.14 Aligned_cols=253 Identities=18% Similarity=0.233 Sum_probs=202.3
Q ss_pred CcccccccCCCCcccEEEEEEEcC-----CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeee-CCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN-----RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCA-GDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~ 142 (508)
+.|.+.+.||+|+||.||+|.... +..|++|++..... .....+.+|+.+++.++||||+++++++.. +...+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 456777889999999999999655 67899998864432 224568899999999999999999999876 46789
Q ss_pred eeeecCCCCCHHHHhhccCC------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 143 LVAEYMPNDTLAKHLFHWEK------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
+++||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCc
Confidence 99999999999999864322 46899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCC
Q 010529 217 KNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGK 289 (508)
Q Consensus 217 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
+...... ...++..|+|||++.+..++.++||||||+++|++++ |+.|+...... .+...+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 239 (280)
T cd05043 165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-----EMAAYLKDGYRLA 239 (280)
T ss_pred ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHcCCCCC
Confidence 8654332 2234567999999988889999999999999999999 87665432110 1111111111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+..++..+.+++.+||..+|++|||+.++++.|..+..
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 233456789999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=312.73 Aligned_cols=246 Identities=16% Similarity=0.208 Sum_probs=198.5
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+|.+++.||.|+||.||+|.. .+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4567888999999999999994 568899999987655444557889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
++++|.+++. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 89 ~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 165 (267)
T cd06645 89 GGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS 165 (267)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence 9999999886 3457899999999999999999999999 999999999999999999999999998654322 34
Q ss_pred cccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC-C--CHHHHHHH
Q 010529 225 YSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-F--SSEEATQV 298 (508)
Q Consensus 225 ~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l 298 (508)
..|+..|+|||++. ...++.++|||||||++|+|++|..|+...... .............. . ....+..+
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RALFLMTKSNFQPPKLKDKMKWSNSF 241 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch----hhHHhhhccCCCCCcccccCCCCHHH
Confidence 46889999999974 456888999999999999999999776432100 00000000000000 0 11235678
Q ss_pred HHHHHHhcccCCCCCCChHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+++.+||..+|++|||+.+++++
T Consensus 242 ~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 242 HHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHHHccCCchhCcCHHHHhcC
Confidence 899999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-40 Score=316.54 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=197.8
Q ss_pred CcccccccCCCCcccEEEEEEEcC-----------------CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN-----------------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANL 131 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~ 131 (508)
.+|+++++||+|+||.||+|.... +..||+|.+...... ....+.+|+++++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 467889999999999999998532 245899998754322 24578899999999999999999
Q ss_pred eeeeeeCCcceeeeecCCCCCHHHHhhccC---------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee
Q 010529 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWE---------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202 (508)
Q Consensus 132 ~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill 202 (508)
++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||||+||++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili 163 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLV 163 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceee
Confidence 999999899999999999999999986432 126899999999999999999999999 9999999999999
Q ss_pred CCCCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh--CCCCCCchhhhhhh
Q 010529 203 DEDGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS--GKHIPPSHALDMIR 274 (508)
Q Consensus 203 ~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt--g~~~~~~~~~~~~~ 274 (508)
+.++.++|+|||++...... ....++..|+|||++.++.++.++||||||+++|||++ +..|+........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~- 242 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV- 242 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHH-
Confidence 99999999999998754332 12334678999999988889999999999999999998 4433321110000
Q ss_pred ccchhhhh---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 275 GENLNLLM---DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 275 ~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
........ ........+...+.++.+++.+||+.||.+|||+.+|++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 243 IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 00000000 001111123344578999999999999999999999998885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=316.15 Aligned_cols=253 Identities=18% Similarity=0.243 Sum_probs=196.0
Q ss_pred CcccccccCCCCcccEEEEEEEcC---------------CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN---------------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIG 133 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~ 133 (508)
.+|++.+.||+|+||.||+++... ...||||.++..... ....|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467889999999999999998532 235899998754322 2356999999999999999999999
Q ss_pred eeeeCCcceeeeecCCCCCHHHHhhccC----------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC
Q 010529 134 YCCAGDERLLVAEYMPNDTLAKHLFHWE----------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203 (508)
Q Consensus 134 ~~~~~~~~~lv~E~~~~~sL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~ 203 (508)
++...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~ 163 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVG 163 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEc
Confidence 9999999999999999999999985321 124788899999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCC--CCCCchhhhhhhc
Q 010529 204 EDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK--HIPPSHALDMIRG 275 (508)
Q Consensus 204 ~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~--~~~~~~~~~~~~~ 275 (508)
.++.+||+|||++....... ...++..|+|||++.++.++.++||||||+++|+|+++. .|+..........
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 243 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE 243 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence 99999999999987543322 123356899999998888999999999999999999843 3332211100000
Q ss_pred cchhhhhc---cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 276 ENLNLLMD---SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
....... .......+...+..+.+|+.+||..+|++|||+.+|++.|.
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 244 -NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0000000 00111122334678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-40 Score=325.36 Aligned_cols=251 Identities=16% Similarity=0.180 Sum_probs=195.0
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
..+|++++.||.|+||.||++.. .++..||||++..... .....+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46788899999999999999995 5688999999865322 23457889999999999999999999986543
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..|+||||+. ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 100 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 100 DVYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred eeEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 4699999996 46766663 24788999999999999999999999 999999999999999999999999998754
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh-h----h--cc-----------ch
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-I----R--GE-----------NL 278 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~----~--~~-----------~~ 278 (508)
... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||....... + . +. ..
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 332 33567899999999998899999999999999999999998775321000 0 0 00 00
Q ss_pred hhhhcc---------------ccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 279 NLLMDS---------------HLE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 279 ~~~~~~---------------~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
...... ... .......+..+.+|+.+||..||++|||+.|++.|-+-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 318 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 000000 000 00011124678999999999999999999999998543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=321.36 Aligned_cols=250 Identities=18% Similarity=0.203 Sum_probs=193.6
Q ss_pred ccccCCCC--cccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 74 IVSESGEK--AANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 74 ~~~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+++.||+| +|++||++. ..+|+.||||++....... .+.+.+|+.+++.++||||++++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56788998 788999999 4678999999997543222 346778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------ 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------ 222 (508)
++++|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++++||+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999986544456899999999999999999999999 999999999999999999999999864332111
Q ss_pred -----CccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhhh----hccchhhhhcc-------
Q 010529 223 -----KSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI----RGENLNLLMDS------- 284 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~----~~~~~~~~~~~------- 284 (508)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.|+........ ........++.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 12245677999999875 4588999999999999999999988653211000 00000000000
Q ss_pred -----------------------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 285 -----------------------------HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 285 -----------------------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..........++.+.+|+.+||+.||++|||+.+++++-.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 0000111234568999999999999999999999998744
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=308.99 Aligned_cols=246 Identities=18% Similarity=0.198 Sum_probs=202.9
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|++++.||.|+||.||.++ ..+++.+++|.+.... ......+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 6788899999999999999 5568889999986543 233457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----c
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----S 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 224 (508)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999997544567899999999999999999999999 9999999999999999999999999987554332 3
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..+++.|+|||.+.+..++.++||||||+++|+|++|..|+...... .....+..... ...+...+..+.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL----NLVVKIVQGNY-TPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHcCCC-CCCccccCHHHHHHHHH
Confidence 46789999999998888889999999999999999999876432110 00111111111 11223456789999999
Q ss_pred hcccCCCCCCChHHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L 323 (508)
||..+|.+|||+.++++++
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=309.58 Aligned_cols=245 Identities=24% Similarity=0.290 Sum_probs=193.5
Q ss_pred cCCCCcccEEEEEEEcC-CC--EEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRLEN-RQ--WIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||.|+||.||+|...+ +. .+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 57999999999999643 43 468888864332 2245788999999999 8999999999999999999999999999
Q ss_pred CHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 152 TLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 152 sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
+|.+++.... ...+++.++..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986422 135789999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
..... .....+..|+|||++.+..++.++||||||+++|||++ |..|+...... .....+........+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHHhCCCCCCCCCc
Confidence 33211 11223567999999988889999999999999999997 87765432111 01111111111122334
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+.++.+++.+||..+|.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5667999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=306.98 Aligned_cols=242 Identities=25% Similarity=0.373 Sum_probs=197.0
Q ss_pred ccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHH
Q 010529 76 SESGEKAANVVYKGRLENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLA 154 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~ 154 (508)
+.||.|+||.||++...+++.|++|++...... ....+.+|++++++++|+||+++++++......++||||+.+++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 357999999999999766889999998765433 3457999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc------cccC
Q 010529 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS------YSTN 228 (508)
Q Consensus 155 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~t 228 (508)
+++.. ....+++..+..++.+++.||.|||+++ ++||||||+|||++.++.++|+|||++........ ...+
T Consensus 81 ~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 81 TFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 99864 3446889999999999999999999999 99999999999999999999999999875542211 1224
Q ss_pred CCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
..|+|||.+.++.++.++||||||+++|+|+| |..|+..... ......+........+...+..+.+++.+||.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 233 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQTRERIESGYRMPAPQLCPEEIYRLMLQCWA 233 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhc
Confidence 56999999988889999999999999999999 5655433211 11111111111222344556789999999999
Q ss_pred cCCCCCCChHHHHHHHH
Q 010529 308 YEPRERPSTKNLVVTLA 324 (508)
Q Consensus 308 ~~p~~Rps~~~il~~L~ 324 (508)
.+|.+|||+.++++.|.
T Consensus 234 ~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 234 YDPENRPSFSEIYNELQ 250 (251)
T ss_pred cChhhCcCHHHHHHHhh
Confidence 99999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=314.69 Aligned_cols=256 Identities=18% Similarity=0.256 Sum_probs=206.1
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.++|++++.||+|+||+||++.. .++..||+|++..... ...+.+.+|+++++.++||||+++++++.....+++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 45678899999999999999995 4688899998865432 235679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--C
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--K 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~ 223 (508)
|+++++|.+++.. .+.+++..+..++.+++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~ 160 (284)
T cd06620 84 FMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIAD 160 (284)
T ss_pred cCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccC
Confidence 9999999998863 4578999999999999999999997 46 999999999999999999999999988654322 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh---hhc----cchhhhhccccCCCCC-HHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM---IRG----ENLNLLMDSHLEGKFS-SEEA 295 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~-~~~~ 295 (508)
...++..|+|||++.+..++.++|||||||++|+|+||..|+....... ... .....++.... ..++ ...+
T Consensus 161 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 239 (284)
T cd06620 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-PRLPSSDFP 239 (284)
T ss_pred ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-CCCCchhcC
Confidence 3568899999999988889999999999999999999998865422110 000 01111111111 1112 2356
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..+.+|+.+||..||++|||+.+++++..-++.
T Consensus 240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 789999999999999999999999998666543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=311.00 Aligned_cols=246 Identities=18% Similarity=0.234 Sum_probs=184.8
Q ss_pred ccCCCCcccEEEEEEEcC---CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 76 SESGEKAANVVYKGRLEN---RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
++||+|+||.||+|...+ ...+++|.+...... ....|.+|+.+++.++||||+++++.+......++||||++++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999998533 346788877644322 2346889999999999999999999999999999999999999
Q ss_pred CHHHHhhccCC---CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------
Q 010529 152 TLAKHLFHWEK---QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------ 222 (508)
Q Consensus 152 sL~~~l~~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------ 222 (508)
+|.+++..... ...++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999864322 33567888999999999999999999 999999999999999999999999998653322
Q ss_pred CccccCCCCCCcccccc-------CCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHH
Q 010529 223 KSYSTNLAYTPPEYLKN-------GRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (508)
....++..|+|||++.. ..++.++||||||+++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 22234567999998742 356789999999999999999 5544432211100000000000011112223345
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+..+.+++..|| .||++|||+.+|++.|
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 677888999999 5999999999999887
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=322.15 Aligned_cols=247 Identities=19% Similarity=0.184 Sum_probs=195.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|++++.||+|+||.||+++. .+++.||||++.... ......+.+|+.++..++|+||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 578899999999999999995 458899999986421 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
|++|++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999864 3456899999999999999999999999 9999999999999999999999999987544322
Q ss_pred --ccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc---CCCCCHH
Q 010529 224 --SYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL---EGKFSSE 293 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 293 (508)
...||+.|+|||++.+ ..++.++|||||||++|+|++|+.|+........ ...+..... .......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~ 235 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHKEHFQFPPDVTD 235 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH----HHHHHcCCCcccCCCccCC
Confidence 2358999999999863 4578899999999999999999988754321100 011111000 0111123
Q ss_pred HHHHHHHHHHHhcccCCC--CCCChHHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPR--ERPSTKNLVVTL 323 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~--~Rps~~~il~~L 323 (508)
.+..+.+++.+|+..++. .|+++.+++.|-
T Consensus 236 ~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 236 VSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 567788999998865443 378999999983
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=313.20 Aligned_cols=245 Identities=21% Similarity=0.273 Sum_probs=211.8
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+-+.||+|.|+.|-+++ .=+|..||||++.+....+ ...+.+|++.|+.++|||||++|.+......+|||+|+-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 5666788999999999999 5689999999997655443 457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee-CCCCCeEEcccCCccccCCC---Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF-DEDGDPRLSCFGLMKNSMDG---KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill-~~~~~~kl~Dfg~a~~~~~~---~~ 224 (508)
.+|+|+++|.. +...+.+..+.+++.||+.|+.|+|... +|||||||+||++ ..-|.+||.|||++..+.++ .+
T Consensus 100 D~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 99999999976 5567999999999999999999999999 9999999999876 57899999999999988877 46
Q ss_pred cccCCCCCCccccccCCcC-ccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
.+|+..|-|||++.|..|+ +..|||||||+||-|++|+.||... -..+.+..+++-. ...|...+.+..+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA----NDSETLTmImDCK--YtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA----NDSETLTMIMDCK--YTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc----cchhhhhhhhccc--ccCchhhhHHHHHHHH
Confidence 7899999999999999986 4889999999999999999876432 1223344444432 3468888999999999
Q ss_pred HhcccCCCCCCChHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~ 324 (508)
.||..||.+|.|.++|+..-|
T Consensus 252 sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred HHHhcCchhhccHHHHhcccc
Confidence 999999999999999987644
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=308.33 Aligned_cols=243 Identities=24% Similarity=0.348 Sum_probs=194.7
Q ss_pred ccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
++||+|+||.||+|.+.. +..||+|.+...... ..+.+.+|+.+++.++||||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 368999999999998432 267999998765432 3457999999999999999999999875 5568999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcc-----
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY----- 225 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----- 225 (508)
++|.+++.. ...+++..+..++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999964 347899999999999999999999999 999999999999999999999999998755433221
Q ss_pred --ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 226 --STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 226 --~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+.... .......+........+...+..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-----GAEVIAMLESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 12357999999988889999999999999999998 776643211 1111111111111223344567899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhh
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+||..+|.+|||+.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=329.52 Aligned_cols=250 Identities=18% Similarity=0.209 Sum_probs=195.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCC-----cce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-----ERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-----~~~ 142 (508)
++++++.||.|+||.||++.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 356788999999999999995 5689999999864321 22457889999999999999999999998766 789
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 81 lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999996 67888775 4567999999999999999999999999 999999999999999999999999998754332
Q ss_pred -----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhh--------hhccchh---------
Q 010529 223 -----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDM--------IRGENLN--------- 279 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--------~~~~~~~--------- 279 (508)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||....... .......
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 223568899999998764 47889999999999999999998765421100 0000000
Q ss_pred --hhhccccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 280 --LLMDSHLEG-------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 280 --~~~~~~~~~-------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+....... ......+.++.+|+.+||..||.+|||+.+++.+-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 000000000 011223567889999999999999999999998854
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=309.61 Aligned_cols=243 Identities=19% Similarity=0.293 Sum_probs=199.3
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCCh---------hHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDP---------TQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
|.+...||.|++|.||+|.. .+++.||+|.+........ +.+.+|+.++++++||||+++++++......
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45667889999999999995 4578899998865433221 4588999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 999999999999999963 456899999999999999999999999 99999999999999999999999999875542
Q ss_pred C----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 222 G----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 222 ~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
. ....++..|+|||.+.+..++.++||||||+++|+|++|+.|+..... ........ .......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~-~~~~~~~~ 233 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQAIFKIG-ENASPEIP 233 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHHHHHHh-ccCCCcCC
Confidence 1 123467889999999888889999999999999999999988653211 00111111 12223344
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...+..+.+++.+||+.||.+||++.+++++
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 4567889999999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=309.14 Aligned_cols=238 Identities=24% Similarity=0.385 Sum_probs=189.9
Q ss_pred ccCCCCcccEEEEEEEcC-C----------CEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 76 SESGEKAANVVYKGRLEN-R----------QWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
+.||+|+||.||+|...+ + ..|++|.+...... ...|.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 357999999999999654 3 24778877644332 5789999999999999999999999988 778999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-------CeEEcccCCcc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-------DPRLSCFGLMK 217 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-------~~kl~Dfg~a~ 217 (508)
|||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++ .+||+|||++.
T Consensus 79 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 79 EEYVKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEcCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 999999999999864 2337899999999999999999999999 99999999999999887 79999999998
Q ss_pred ccCCCCccccCCCCCCccccccC--CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 218 NSMDGKSYSTNLAYTPPEYLKNG--RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 218 ~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.........++..|+|||++.+. .++.++||||||+++|+|++|..++...... ......... ....+....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~----~~~~~~~~~--~~~~~~~~~ 230 (259)
T cd05037 157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS----SEKERFYQD--QHRLPMPDC 230 (259)
T ss_pred ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc----hhHHHHHhc--CCCCCCCCc
Confidence 76665556677889999999876 7889999999999999999964443322210 000011100 011111122
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
..+.+++.+||..+|.+|||+.++++.|
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 6789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=307.61 Aligned_cols=247 Identities=22% Similarity=0.334 Sum_probs=199.7
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+++++.+.||.|+||.||++.+.++..+|+|.+.... .....|.+|++++++++||||+++++++......++||||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 34677889999999999999998777789999886443 33467999999999999999999999999889999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----- 223 (508)
.+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 82 EHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999999864 3346889999999999999999999999 9999999999999999999999999887543321
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...++..|+|||.+.++.++.++||||||+++|+|++ |..|+........ ... +........+...+..+.+|+
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV----VET-INAGFRLYKPRLASQSVYELM 234 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH----HHH-HhCCCCCCCCCCCCHHHHHHH
Confidence 1223567999999988889999999999999999998 7766532211100 000 111111111223457799999
Q ss_pred HHhcccCCCCCCChHHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L 323 (508)
.+||..+|++|||+.++++.|
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHcccChhhCCCHHHHHHhh
Confidence 999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=307.24 Aligned_cols=247 Identities=19% Similarity=0.222 Sum_probs=202.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
++|.+.+.||.|+||.||+|.. .++..+++|.+........+.+.+|+.+++.++||||+++++++......+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 3567888999999999999995 457889999998665555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
.+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 83 ~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 83 GGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence 99999998864 2357899999999999999999999999 999999999999999999999999998754432 23
Q ss_pred cccCCCCCCccccccC---CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc---ccCCCCCHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNG---RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS---HLEGKFSSEEATQV 298 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 298 (508)
..++..|+|||.+.+. .++.++||||||+++|+|+||+.|+...... ......... ..........+.++
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM----RALFLISKSNFPPPKLKDKEKWSPVF 236 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhccCCCccccchhhhhHHH
Confidence 4578889999998766 7889999999999999999999776432110 000000001 00111234456789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+++.+||..+|.+|||+.+++.+
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 237 HDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHhcC
Confidence 999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=308.65 Aligned_cols=246 Identities=15% Similarity=0.173 Sum_probs=200.6
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeee-CCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCA-GDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~lv~E 146 (508)
.|++++.||.|++|.||++.. .+++.||+|++..... ...+.+.+|++++++++|+||+++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 367889999999999999995 4578899999865332 234568899999999999999999998764 345789999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+++++|.+++.......+++.++..++.+++.||.+||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 999999999997645567899999999999999999999999 999999999999999999999999998755332
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
....+++.|+|||++.+..++.++||||||+++++|++|+.|+........ ...... ......+...+..+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li 234 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL----VYRIIE-GKLPPMPKDYSPELGELI 234 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHh-cCCCCCccccCHHHHHHH
Confidence 234578899999999888899999999999999999999987643211100 111111 111223445678899999
Q ss_pred HHhcccCCCCCCChHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~ 322 (508)
.+||..+|++|||+.+++++
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHhccCcccCCCHHHHhcC
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=313.68 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=198.0
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
.+|.+++.||+|+||.||+|... .+..||+|.+...... ....+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL 85 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 45788899999999999999743 2457999988644321 2346889999999999999999999999888999
Q ss_pred eeeecCCCCCHHHHhhccC--------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCC
Confidence 9999999999999996422 133567788999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccC
Q 010529 215 LMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 215 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
+++..... ....++..|+|||.+.++.++.++|||||||++|||++ |..|+..... ......+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~ 239 (288)
T cd05061 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVLKFVMDGGY 239 (288)
T ss_pred ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCC
Confidence 98754332 12234567999999988889999999999999999999 5545432111 111111111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
...+...+..+.+++.+||+.+|.+|||+.++++.|....
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1223344678999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=314.22 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=198.9
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
.+|++++.||.|+||.||+|... ++..||+|.+...... ....+.+|+.+++.++||||+++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 45778899999999999999853 4678999998754322 2456899999999999999999999999989999
Q ss_pred eeeecCCCCCHHHHhhccC--------------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill 202 (508)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~ 163 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLV 163 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEe
Confidence 9999999999999996321 124788899999999999999999999 9999999999999
Q ss_pred CCCCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhc
Q 010529 203 DEDGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRG 275 (508)
Q Consensus 203 ~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~ 275 (508)
+.++.++|+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..|+......
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~---- 239 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE---- 239 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 99999999999998754322 12234567999999988889999999999999999998 66565332111
Q ss_pred cchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 276 ENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.....+.... ....+...+.++.+|+.+||..+|.+|||+.|+++.|++
T Consensus 240 ~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 EVIYYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 0011111111 111233456789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=311.30 Aligned_cols=245 Identities=19% Similarity=0.267 Sum_probs=201.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++++.||.|++|.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 567888999999999999995 468899999986543 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLK---PGKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 9999999985 337899999999999999999999999 999999999999999999999999998765433 33
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH-HHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE-EATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~ 303 (508)
..++..|+|||++.+..++.++||||||+++|+|+||..|+..... ......+........+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcCCCCCcccccCHHHHHHHH
Confidence 4678889999999888899999999999999999999977643210 001111111111122222 5677999999
Q ss_pred HhcccCCCCCCChHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~ 324 (508)
+||..+|++|||+.+++.+-.
T Consensus 233 ~~l~~~p~~Rpt~~~il~~~~ 253 (274)
T cd06609 233 LCLNKDPKERPSAKELLKHKF 253 (274)
T ss_pred HHhhCChhhCcCHHHHhhChh
Confidence 999999999999999998743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=314.43 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=202.6
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
..+.|++++.||.|+||.||+|.. .++..||+|.+........+.+..|++++++++||||+++++++..+...++|||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 345688999999999999999995 4688999999875544445679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 9999999998864 3456999999999999999999999999 999999999999999999999999987654332
Q ss_pred CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc-ccCCCCCHHHHH
Q 010529 223 KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS-HLEGKFSSEEAT 296 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 296 (508)
....+++.|++||.+. +..++.++||||||+++|+|++|+.|+...... .....+... ...-..+...+.
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 236 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSEPPTLDQPSKWSS 236 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCCCCCcCCcccCCH
Confidence 2345788999999974 345678999999999999999999776432100 000111110 001112334567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+.+++.+||..+|.+|||+.+++++-+
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 237 SFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 7999999999999999999999998744
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=313.10 Aligned_cols=244 Identities=19% Similarity=0.281 Sum_probs=199.8
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
|..++.||.|+||.||+|.. .++..||+|.+..... ...+.+.+|+.+++.++||||+++++++......++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 45667889999999999985 4578899999864432 224578999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----cc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SY 225 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 225 (508)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999884 457899999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
.++..|+|||++.+..++.++||||||+++|+|+||+.|+..... ......+............+..+.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP-----MRVLFLIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch-----hhHHhhhhcCCCCCCCcccCHHHHHHHHHH
Confidence 567889999999888899999999999999999999977532210 001111111112223334567799999999
Q ss_pred cccCCCCCCChHHHHHHHH
Q 010529 306 LQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 306 l~~~p~~Rps~~~il~~L~ 324 (508)
|..+|++|||+.+++.+-+
T Consensus 237 l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 237 LNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred ccCCcccCcCHHHHHHhHH
Confidence 9999999999999999844
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=343.66 Aligned_cols=250 Identities=17% Similarity=0.206 Sum_probs=195.8
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
.+.+|.+++.||.|+||+||+|+. .++..||+|.+...... ....|..|+.+++.|+|||||+++++|... ..+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 456789999999999999999995 45788999998754322 245789999999999999999999988653 4689
Q ss_pred eeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCC------CceeecCCCcceeeCC----------
Q 010529 143 LVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEG------RPLYHDLNAYRVLFDE---------- 204 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~------~iiH~Dikp~Nill~~---------- 204 (508)
|||||+++++|.++|... ....+++..++.|+.||+.||.|||+.+ .||||||||+||||+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999999999998642 2357999999999999999999999842 2999999999999964
Q ss_pred -------CCCeEEcccCCccccCCC---CccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhh
Q 010529 205 -------DGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM 272 (508)
Q Consensus 205 -------~~~~kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~ 272 (508)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++||||||||||+|+||..||......
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~- 249 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF- 249 (1021)
T ss_pred cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH-
Confidence 235899999998765432 33468999999999864 45788999999999999999999886432100
Q ss_pred hhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 273 IRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+...+..... ......+.++.+||..||..+|.+|||+.+++.+
T Consensus 250 ---~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 250 ---SQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred ---HHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 000111111110 0112346779999999999999999999999976
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=324.72 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=195.1
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeC------
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------ 138 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------ 138 (508)
-..+|++++.||+|+||.||++.. ..++.||||++..... .....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346788999999999999999994 4588899999875432 2245788999999999999999999988643
Q ss_pred CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
...++||||+. ++|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCccccc
Confidence 24699999996 46777663 24888999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc------------------cc
Q 010529 219 SMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG------------------EN 277 (508)
Q Consensus 219 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~------------------~~ 277 (508)
.... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.......... ..
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 5443 33568899999999998889999999999999999999998875431100000 00
Q ss_pred hhhhhcc---------------ccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 278 LNLLMDS---------------HLE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 278 ~~~~~~~---------------~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
....+.. ... .......+..+.+|+.+||..||.+|||+.++++|-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 0000000 000 001112346788999999999999999999999884
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=309.30 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=199.7
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC------hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
+|.+.+.||.|+||+||+|...+++.+|||.+....... ...+.+|+.+++.++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 366778899999999999998788899999986443211 24688999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC---
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD--- 221 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~--- 221 (508)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 999999999999963 356889999999999999999999999 99999999999999999999999998864321
Q ss_pred -------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh-ccccCCCCCHH
Q 010529 222 -------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM-DSHLEGKFSSE 293 (508)
Q Consensus 222 -------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 293 (508)
.....++..|+|||++.+..++.++||||||+++|+|++|..|+..... . ....... ........+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~--~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR--L--AAMFYIGAHRGLMPRLPDS 233 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh--H--HHHHHhhhccCCCCCCCCC
Confidence 1234578899999999888889999999999999999999987643110 0 0000000 00112233445
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+..+.+++.+||..+|.+|||+.+++.+
T Consensus 234 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 234 FSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 67789999999999999999999999864
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=310.28 Aligned_cols=247 Identities=18% Similarity=0.253 Sum_probs=203.9
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.|+.++.||.|+||.||+|... ++..||||.+..... .....+.+|+.+++.++||||+++++++......++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667788999999999999954 588899999865432 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
+|++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 9999999884 456899999999999999999999999 999999999999999999999999998655432 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..++..|+|||++.+..++.++||||||+++|+|+||..|+...... ..............+...+..+.+++.+
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcCCCCCCchhhhHHHHHHHHH
Confidence 35678899999998888999999999999999999999775432110 0111111122233455677889999999
Q ss_pred hcccCCCCCCChHHHHHHHHHh
Q 010529 305 CLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~ 326 (508)
||..+|++||++.+++.+-.-.
T Consensus 236 ~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06640 236 CLNKDPSFRPTAKELLKHKFIV 257 (277)
T ss_pred HcccCcccCcCHHHHHhChHhh
Confidence 9999999999999999885543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=324.38 Aligned_cols=246 Identities=18% Similarity=0.174 Sum_probs=195.8
Q ss_pred cccccccCCCCcccEEEEEEEc---CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|.+++.||.|+||.||++... .+..||||.+... ..+.+|+++++.++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 5889999999999999999843 3567999987543 3467899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----- 222 (508)
+. ++|.+++. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 95 68888884 4567999999999999999999999999 999999999999999999999999998754432
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhh--------hhhc---cc----------hhh
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD--------MIRG---EN----------LNL 280 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--------~~~~---~~----------~~~ 280 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .. ...
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 2346899999999999888999999999999999999999887543110 0000 00 000
Q ss_pred h---hccccCCCC--C-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 281 L---MDSHLEGKF--S-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 281 ~---~~~~~~~~~--~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
. ......... + ...+.++.+++.+||..||++|||+.+++.+-.-
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f 378 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLF 378 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence 0 000000000 0 1124578899999999999999999999998543
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=306.19 Aligned_cols=244 Identities=17% Similarity=0.232 Sum_probs=201.5
Q ss_pred CcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
++|.+.+.||.|+||.||+|.... +..|++|.+..... ...+.+|+++++.++||||+++++++......++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 356778889999999999999654 78899999865432 678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----c
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----S 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 224 (508)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 ~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 81 GAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 99999999854 3457899999999999999999999999 9999999999999999999999999987654432 3
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSEEATQVVGLA 302 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~ 302 (508)
..++..|+|||++.+..++.++||||||+++|+|++|+.|+...... .... ...... ....+...+..+.+++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 233 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM----RAIF-MIPNKPPPTLSDPEKWSPEFNDFV 233 (256)
T ss_pred ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh----hhhh-hhccCCCCCCCchhhcCHHHHHHH
Confidence 35788999999998888999999999999999999999876432100 0000 001001 1112334567899999
Q ss_pred HHhcccCCCCCCChHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~ 322 (508)
.+||..+|.+|||+.+++.+
T Consensus 234 ~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 234 KKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred HHHHhcChhhCcCHHHHhcC
Confidence 99999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=317.26 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=202.0
Q ss_pred cccccccCCCCcccEEEEEEEcC--------CCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc
Q 010529 71 SDNIVSESGEKAANVVYKGRLEN--------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE 140 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 140 (508)
.|.+.+.||+|+||.||+|...+ ...||+|.++..... ....+.+|+.+++++ +||||++++++|...+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 46788999999999999998421 236899988754322 245789999999999 89999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~ 206 (508)
.++||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCC
Confidence 999999999999999986421 235788999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchh
Q 010529 207 DPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLN 279 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 279 (508)
.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ |..|+....... ..
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~ 246 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-----LF 246 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-----HH
Confidence 99999999987554322 1123457999999988889999999999999999999 665554321111 11
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
..+........+...+..+.+++.+||..+|.+|||+.+++..|..+....
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 247 KLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 111111222233445678999999999999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=312.52 Aligned_cols=252 Identities=20% Similarity=0.265 Sum_probs=195.9
Q ss_pred cccccccCCCCcccEEEEEEEc-----------------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-----------------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLI 132 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~ 132 (508)
+|++.+.||.|+||.||++... +...||+|++...... ....+.+|+.+++.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4678899999999999998632 2346899998754322 245799999999999999999999
Q ss_pred eeeeeCCcceeeeecCCCCCHHHHhhccC---------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC
Q 010529 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWE---------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203 (508)
Q Consensus 133 ~~~~~~~~~~lv~E~~~~~sL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~ 203 (508)
+++...+..++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEc
Confidence 99999999999999999999999986422 124778899999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh--CCCCCCchhhhhhhc
Q 010529 204 EDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS--GKHIPPSHALDMIRG 275 (508)
Q Consensus 204 ~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt--g~~~~~~~~~~~~~~ 275 (508)
.++.++|+|||++....... ...++..|++||...++.++.++|||||||++|||+| |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987654322 1223567999999888889999999999999999998 444443211110000
Q ss_pred cchhhhhcc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 276 ENLNLLMDS---HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 276 ~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
........ ......+..++..+.+|+.+||+.||.+|||+.+|++.|+
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 -NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred -HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00000000 0011122345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=323.38 Aligned_cols=244 Identities=20% Similarity=0.269 Sum_probs=206.1
Q ss_pred ccccCCCCcccEEEEEEEcC--CC--EEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 74 IVSESGEKAANVVYKGRLEN--RQ--WIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+.+.||+|.||.|++|.|.. |+ .||||.++..... ...+|++|+.+|.+|+|||++++||+..+ ....||||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 45678999999999999753 44 5799999876544 46789999999999999999999999977 6778999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcc-c-
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY-S- 226 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~- 226 (508)
+.|||.+.|+......|.......++.||+.||.||.+++ +|||||-..|+||-....+||||||+++.+...... +
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998766778889999999999999999999999 999999999999999989999999999977665432 2
Q ss_pred -----cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 227 -----TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 227 -----~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....|+|||.++...++.++|||+|||+||||+|+..-+|-. ..+..+-+.++..-+-+.+..+++++.++
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G----~~g~qIL~~iD~~erLpRPk~csedIY~i 347 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG----CRGIQILKNIDAGERLPRPKYCSEDIYQI 347 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC----CCHHHHHHhccccccCCCCCCChHHHHHH
Confidence 235699999999999999999999999999999976554432 12223334444444445577889999999
Q ss_pred HHHhcccCCCCCCChHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L 323 (508)
+..||..+|++||||..|.+.+
T Consensus 348 mk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 348 MKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHhccCCccccccHHHHHHhH
Confidence 9999999999999999998554
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=309.33 Aligned_cols=251 Identities=17% Similarity=0.216 Sum_probs=197.8
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..+++++.. ..||+|+||.||+|.. .++..|++|.+........+.+.+|+.+++.++|+||+++++++..++..+
T Consensus 5 ~~~~~~~~~---~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGER---VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCce---EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 345555544 3569999999999994 467889999987665445668999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCc--ChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCcccc
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTI--EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMKNS 219 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l--~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~~ 219 (508)
+||||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.++|+|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999999998642 2344 78888999999999999999999 999999999999976 679999999998654
Q ss_pred CCC----CccccCCCCCCccccccCC--cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 220 MDG----KSYSTNLAYTPPEYLKNGR--VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
... ....++..|+|||++.+.. ++.++||||||+++|+|++|+.|+........ . .............+..
T Consensus 160 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 236 (268)
T cd06624 160 AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--A-MFKVGMFKIHPEIPES 236 (268)
T ss_pred ccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--h-HhhhhhhccCCCCCcc
Confidence 322 2345788999999986543 78899999999999999999977643211000 0 0000000112233445
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+.++.+++.+||..+|.+|||+.+++.+
T Consensus 237 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 237 LSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 67789999999999999999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=308.16 Aligned_cols=252 Identities=19% Similarity=0.270 Sum_probs=200.3
Q ss_pred CcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.++.+.+.||.|+||.||+|...+ ...|+||...... ....+.+.+|+.+++.++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 346677889999999999998533 3468999886544 2234579999999999999999999999864 567899
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS 224 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 224 (508)
|||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 85 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 85 MELAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEcCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 999999999999964 2346899999999999999999999999 99999999999999999999999999875543321
Q ss_pred -----cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 225 -----YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 225 -----~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+........ ... +........+...+..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~ 237 (270)
T cd05056 163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV----IGR-IENGERLPMPPNCPPTL 237 (270)
T ss_pred eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH----HHH-HHcCCcCCCCCCCCHHH
Confidence 223457999999988889999999999999999996 8877543211100 001 11111112334556789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+++.+||..+|.+|||+.+++..|..+...
T Consensus 238 ~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 238 YSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=321.12 Aligned_cols=247 Identities=17% Similarity=0.160 Sum_probs=196.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|.+++.||+|+||.||+++. .+++.||||.+.... ......+.+|+.++..++|+||+++++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3678899999999999999995 458889999986422 122345888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC--
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
||++||+|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 99999999999964 2457899999999999999999999999 9999999999999999999999999987554321
Q ss_pred ---ccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC---CCCCH
Q 010529 224 ---SYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSS 292 (508)
Q Consensus 224 ---~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 292 (508)
...||+.|+|||++.+ +.++.++||||||+++|+|++|+.|+....... ....+...... +....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~----~~~~i~~~~~~~~~p~~~~ 234 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE----TYGKIMNHEERFQFPSHIT 234 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH----HHHHHHcCCCcccCCCccc
Confidence 2468999999999875 467889999999999999999998875432110 11111111111 11112
Q ss_pred HHHHHHHHHHHHhcccCCCC--CCChHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRE--RPSTKNLVVT 322 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~--Rps~~~il~~ 322 (508)
..+..+.+++.+||..++.+ |+++.+++.|
T Consensus 235 ~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 235 DVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 34678999999999866554 4688888877
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=317.71 Aligned_cols=244 Identities=13% Similarity=0.141 Sum_probs=190.5
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
..|.+++.||.|+||.||+|+.. ++..||+|+.... ....|+.++++++||||+++++++......++|||++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 35789999999999999999964 4778999975322 3457999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Ccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSY 225 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~ 225 (508)
. ++|.+++.. ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 140 ~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 216 (357)
T PHA03209 140 S-SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL 216 (357)
T ss_pred C-CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence 5 688888854 4457999999999999999999999999 999999999999999999999999998754322 235
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhh----hhh--ccchhhhhc------cccC------
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD----MIR--GENLNLLMD------SHLE------ 287 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~----~~~--~~~~~~~~~------~~~~------ 287 (508)
.||+.|+|||++.+..++.++|||||||++|||+++..++...... ... ...+..++. ..+.
T Consensus 217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 296 (357)
T PHA03209 217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSR 296 (357)
T ss_pred cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccH
Confidence 6899999999999889999999999999999999976554321000 000 000000000 0000
Q ss_pred -------------CCC-------CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 288 -------------GKF-------SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 288 -------------~~~-------~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
... ....+.++.+||.+||+.||.+|||+.++++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 297 LVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000 01124456679999999999999999999987
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=316.13 Aligned_cols=247 Identities=20% Similarity=0.212 Sum_probs=201.4
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|++++.||.|++|.||+|... ++..||+|.+...... ....+..|+++++.++||||+++++++......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5678889999999999999954 5889999999765432 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+.|++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999987545567999999999999999999999999 999999999999999999999999987643221
Q ss_pred -----------------------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh
Q 010529 223 -----------------------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI 273 (508)
Q Consensus 223 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~ 273 (508)
....|+..|+|||++.+..++.++||||||+++|+|++|..|+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-- 238 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD-- 238 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH--
Confidence 1235678899999998888999999999999999999999886533211
Q ss_pred hccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----hHHHHHH
Q 010529 274 RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS----TKNLVVT 322 (508)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps----~~~il~~ 322 (508)
.....+.............+..+.+++.+||..+|++||| +.+++.+
T Consensus 239 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 239 --ETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred --HHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1111122221111112225788999999999999999999 7777765
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=308.02 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=201.2
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCC----EEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQ----WIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+|++++.||.|+||.||+|.+. ++. .||+|.+...... ....+.+|+.+++.++||||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 35678899999999999999953 333 5899988655432 24578899999999999999999999976 78899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 86 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 86 ITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 9999999999999864 3445899999999999999999999999 9999999999999999999999999987654332
Q ss_pred c------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 S------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ~------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
. ..++..|+|||.+....++.++||||||+++||+++ |+.|+...... .+...+........+...+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 238 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-----EIPDLLEKGERLPQPPICTI 238 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHhCCCCCCCCCCCCH
Confidence 1 112467999999988889999999999999999999 88765432111 11111111111222333556
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+.+++.+||..+|.+|||+.+++..|..+..
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 78999999999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=312.77 Aligned_cols=251 Identities=20% Similarity=0.290 Sum_probs=197.5
Q ss_pred cccccccCCCCcccEEEEEEE-cCCC----EEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQ----WIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
+++.++.||.|+||.||+|.+ .++. .||+|.+....... ...+.+|+.+++.++||||++++++|.. ...++|
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCceee
Confidence 456778899999999999985 3444 46888886543222 3368899999999999999999999865 456799
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
+||+++|+|.+++.. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 87 ~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 87 TQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred ehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCccc
Confidence 999999999999864 3446899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 224 -----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...++..|+|||++.+..++.++||||||+++|||++ |+.|+...... ....++........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-----EIPDLLEKGERLPQPPICTID 239 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHCCCCCCCCCCCCHH
Confidence 1234568999999988889999999999999999998 77665432111 111111111111222334567
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+.+++..||..+|++||++.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 240 VYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 89999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=311.78 Aligned_cols=252 Identities=20% Similarity=0.255 Sum_probs=202.1
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++++.||.|+||.||++... ++..||+|.+..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5788999999999999999965 688999998865422 22457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Cc
Q 010529 149 PNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~ 224 (508)
++++|..++.... ...+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999999885321 23789999999999999999999974 7 999999999999999999999999998754332 33
Q ss_pred cccCCCCCCccccccCC------cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGR------VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
..++..|+|||.+.+.. ++.++|||||||++|+|++|+.|+......... .....+.. ......+...+.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVD-GDPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhh-cCCCCCCcccCHHH
Confidence 45778999999986543 478999999999999999999886432111000 01111111 11223455577889
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+|+.+||..+|.+||++.+++.+-+-
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLEHPWL 265 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhcChhh
Confidence 999999999999999999999987543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=320.00 Aligned_cols=246 Identities=17% Similarity=0.189 Sum_probs=195.5
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+|.+++.||+|+||.||+++.. +++.||+|++.... ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 5788899999999999999954 47889999985421 1223458889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 2456899999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC---CCCCHH
Q 010529 223 -KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSE 293 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 293 (508)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+...... +.....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~~~ 235 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHKERFQFPAQVTD 235 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH----HHHHHHhCCCccccCCCcccc
Confidence 2246899999999986 345788999999999999999999887543111 011111111111 111234
Q ss_pred HHHHHHHHHHHhcccCCCC--CCChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRE--RPSTKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~--Rps~~~il~~ 322 (508)
.+..+.+|+.+|+..++.+ |+++.++++|
T Consensus 236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 5678899999988655544 6899999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=322.88 Aligned_cols=250 Identities=15% Similarity=0.183 Sum_probs=194.7
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeC------C
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------D 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~ 139 (508)
..+|.+++.||+|+||.||++.. ..++.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 45788899999999999999994 458889999986532 22345788999999999999999999987543 3
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..|+||||+. ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 4699999996 56777773 24788999999999999999999999 999999999999999999999999999765
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccc------------------h
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGEN------------------L 278 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~------------------~ 278 (508)
... ....+|..|+|||++.+..++.++|||||||++|+|++|+.||............ .
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 443 3356889999999999889999999999999999999999887542110000000 0
Q ss_pred h---------------hhhcccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 279 N---------------LLMDSHL---EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 279 ~---------------~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
. .+..... ...........+.+|+.+||..||.+|||+.++++|-+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0 0000000 00001112457889999999999999999999998843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=322.47 Aligned_cols=237 Identities=17% Similarity=0.185 Sum_probs=186.3
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccC---CCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKL---RRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l---~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
||+|+||.||+|+. .+++.||||++...... ....+..|..++..+ .||||+++++++......|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999995 46889999998643211 223455666776655 799999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cccc
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYS 226 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 226 (508)
++|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++...... ....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999886 4567899999999999999999999999 999999999999999999999999998753222 3456
Q ss_pred cCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 227 TNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 227 ~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
||+.|+|||++.+. .++.++|||||||++|+|+||+.|+........ ...+...... ......+..+.+++.+|
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~----~~~i~~~~~~-~~~~~~~~~~~~li~~~ 232 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM----YRNIAFGKVR-FPKNVLSDEGRQFVKGL 232 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH----HHHHHcCCCC-CCCccCCHHHHHHHHHH
Confidence 89999999998754 478999999999999999999988754321111 0111111000 01122466788999999
Q ss_pred cccCCCCCC----ChHHHHHH
Q 010529 306 LQYEPRERP----STKNLVVT 322 (508)
Q Consensus 306 l~~~p~~Rp----s~~~il~~ 322 (508)
|..||.+|| ++.++++|
T Consensus 233 L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhcC
Confidence 999999998 56666665
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=321.87 Aligned_cols=251 Identities=19% Similarity=0.226 Sum_probs=195.0
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeC------C
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------D 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~ 139 (508)
.+.|.+++.||.|+||.||+|.. .++..||||++..... .....+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 45688899999999999999994 5688999999865322 2235678999999999999999999987543 3
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..+++||++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceec
Confidence 468999998 789988873 457999999999999999999999999 999999999999999999999999998865
Q ss_pred CCC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh-hh------hccchhhhhcccc----
Q 010529 220 MDG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-MI------RGENLNLLMDSHL---- 286 (508)
Q Consensus 220 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~------~~~~~~~~~~~~~---- 286 (508)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.|+...... .. .+...........
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 443 34578999999999876 56888999999999999999999877542110 00 0000000000000
Q ss_pred ------CCCCC--------HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 287 ------EGKFS--------SEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 287 ------~~~~~--------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
....+ ....+.+.+|+.+||..||.+|||+.+++.|-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00000 112345789999999999999999999998843
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=308.54 Aligned_cols=250 Identities=20% Similarity=0.311 Sum_probs=198.3
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
++|.++..||.|+||.||+|+.. +...|++|.+...... ....+.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 45678889999999999999954 2457899988654432 2457999999999999999999999998888999
Q ss_pred eeeecCCCCCHHHHhhccCC-------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEK-------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
+||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999964331 26899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC-----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCC
Q 010529 216 MKNSMDG-----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGK 289 (508)
Q Consensus 216 a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
+...... ....++..|+|||.+.+..++.++||||||+++|+|++ |..|+...... ..............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~----~~~~~~~~~~~~~~ 239 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE----EVLNRLQAGKLELP 239 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH----HHHHHHHcCCcCCC
Confidence 8644322 22345677999999988888999999999999999999 55444221100 00111111111111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+...+..+.+++.+||..+|.+|||+.+++..|.
T Consensus 240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 23345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=310.86 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=194.7
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|.+++.||.|++|.||+|+. .++..||||++...... ....+.+|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 367888999999999999995 46889999998654322 235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 148 MPNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
+. ++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 97 68888875433 357899999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhh--hh-----cc-------------chhhh
Q 010529 223 KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDM--IR-----GE-------------NLNLL 281 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--~~-----~~-------------~~~~~ 281 (508)
....+++.|+|||++.+. .++.++||||||+++|+|+||+.|+....... .. +. .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 223467889999988654 46889999999999999999997764321100 00 00 00000
Q ss_pred hccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 282 MDSHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 282 ~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
....... ......+.++.+++.+||..||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 0011245678899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=305.79 Aligned_cols=246 Identities=17% Similarity=0.188 Sum_probs=202.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|.+++.||.|+||.||++.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 367888999999999999994 5688999999865322 2345799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+.+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 99999999986544456899999999999999999999999 9999999999999999999999999987554432
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...+++.|+|||++.+..++.++||||||+++++|+||+.|+....... ........ .....+...+.++.+++.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~li~ 234 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN----LVLKIIRG-SYPPVSSHYSYDLRNLVS 234 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH----HHHHHhcC-CCCCCcccCCHHHHHHHH
Confidence 2357888999999988888999999999999999999998764321110 01111111 111233455678999999
Q ss_pred HhcccCCCCCCChHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~ 322 (508)
+||+.+|.+||++.+++++
T Consensus 235 ~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 235 QLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=310.73 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=200.7
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
...|++++.||.|+||.||+|.. .+++.||+|.+....... ...+.+|+.+++.++||||++++++|......++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 34467788899999999999995 468899999986443222 24688999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS 224 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 224 (508)
|||+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 94 ~e~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 94 MEYCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred HHhhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 99997 577776643 3456899999999999999999999999 99999999999999999999999999987766666
Q ss_pred cccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 225 ~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
..++..|+|||++. ...++.++||||||+++|+|+||+.|+........ ...+.........+...+..+.++
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 246 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNDSPTLSSNDWSDYFRNF 246 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH----HHHHhcCCCCCCCchhhCHHHHHH
Confidence 77889999999874 35678899999999999999999977543211000 000111111111123456789999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.+||..+|++||++.+++.+.+-
T Consensus 247 i~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 247 VDSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred HHHHhcCChhhCcCHHHHhcChhh
Confidence 999999999999999999987543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=307.68 Aligned_cols=242 Identities=21% Similarity=0.319 Sum_probs=194.3
Q ss_pred cCCCCcccEEEEEEEcC-------CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 77 ESGEKAANVVYKGRLEN-------RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.||.|+||.||+|+..+ +..||||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 57999999999999542 25789998865432 23567999999999999999999999999888999999999
Q ss_pred CCCCHHHHhhccC-----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-----CeEEcccCCccc
Q 010529 149 PNDTLAKHLFHWE-----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-----DPRLSCFGLMKN 218 (508)
Q Consensus 149 ~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-----~~kl~Dfg~a~~ 218 (508)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999996432 234788999999999999999999999 99999999999999877 899999999875
Q ss_pred cCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 219 SMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 219 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
..... ...++..|+|||++.++.++.++||||||+++|+|+| |+.|+...... .....+........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----EVLQHVTAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----HHHHHHhcCCccCCc
Confidence 43321 2234678999999998889999999999999999998 88765432111 011111111112234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
...+..+.+++.+||..+|.+||++.++++.|.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456788999999999999999999999999885
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=313.18 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=199.5
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.++.|.+++.||.|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++..+...++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 466789999999999999999995 4588899999865432 22446889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 689888864 3456889999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-----------ccchhhhhcc-----
Q 010529 223 -KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-----------GENLNLLMDS----- 284 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-----------~~~~~~~~~~----- 284 (508)
....+++.|+|||++.+ ..++.++||||||+++|+|+||+.|+......... ...+..+...
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 22356889999999865 45788999999999999999999876543211000 0000000000
Q ss_pred ----ccCCC----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 285 ----HLEGK----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 285 ----~~~~~----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
..... .....+..+.+|+.+||..||.+|||+.+++++-+-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f 289 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF 289 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 00000 011235678899999999999999999999987443
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=303.19 Aligned_cols=246 Identities=19% Similarity=0.211 Sum_probs=200.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|++++.||.|+||.||++.. .+++.+|||.+...... ....+.+|+.+++.++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 367788999999999999995 56888999998654322 245789999999999999999999999888999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCccccCCC---C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDG---K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~~~---~ 223 (508)
+++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||.+...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 99999999997544556899999999999999999999999 9999999999999855 45899999998765443 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...++..|+|||.+.+..++.++||||||+++|+|++|+.|+........ ...... ......+...+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL----VLKIMS-GTFAPISDRYSPDLRQLIL 234 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH----HHHHHh-cCCCCCCCCcCHHHHHHHH
Confidence 34578899999999888889999999999999999999987643211110 011111 1112233345678999999
Q ss_pred HhcccCCCCCCChHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~ 322 (508)
+||..+|.+|||+.+++++
T Consensus 235 ~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHccCChhhCCCHHHHhhC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=304.79 Aligned_cols=246 Identities=17% Similarity=0.224 Sum_probs=184.3
Q ss_pred cCCCCcccEEEEEEEcCC---CEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRLENR---QWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
+||+|+||.||++...++ ..+++|.+..... ...+.+.+|+.+++.++||||+++++.|......++||||+++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985443 3456776654432 235689999999999999999999999999889999999999999
Q ss_pred HHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC------CCc
Q 010529 153 LAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------GKS 224 (508)
Q Consensus 153 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~------~~~ 224 (508)
|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999996432 234667778899999999999999999 99999999999999999999999998764221 223
Q ss_pred cccCCCCCCcccccc-------CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-hhccchhhhhccccCCCCCHHHHH
Q 010529 225 YSTNLAYTPPEYLKN-------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-IRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
..++..|+|||++.. ..++.++||||||+++|||+++..+|....... ...............+......+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 456788999998743 245779999999999999998654443221110 000000000000111222233556
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+.+++..|| .+|++||++.+|++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 7888999999 68999999999998773
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=313.48 Aligned_cols=244 Identities=16% Similarity=0.228 Sum_probs=183.6
Q ss_pred cccCCCCcccEEEEEEEc---CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee--CCcceeeeecCC
Q 010529 75 VSESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERLLVAEYMP 149 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~lv~E~~~ 149 (508)
..+||+|+||+||+|+.. +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357899999999999954 46789999986543 23568899999999999999999998854 456789999995
Q ss_pred CCCHHHHhhcc-------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee----CCCCCeEEcccCCccc
Q 010529 150 NDTLAKHLFHW-------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF----DEDGDPRLSCFGLMKN 218 (508)
Q Consensus 150 ~~sL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~Dfg~a~~ 218 (508)
++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++..
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 6888877422 1235889999999999999999999999 9999999999999 4567899999999975
Q ss_pred cCCC-------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-----cchhh-----
Q 010529 219 SMDG-------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-----ENLNL----- 280 (508)
Q Consensus 219 ~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-----~~~~~----- 280 (508)
.... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....+.... .....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 4332 23467899999999876 457889999999999999999998764321100000 00000
Q ss_pred -------------------hhccccCCCC------------CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 281 -------------------LMDSHLEGKF------------SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 281 -------------------~~~~~~~~~~------------~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.......... .......+.+|+.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 00112457899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=309.40 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=196.6
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|+++..||.|++|.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 5778889999999999999965 588999999865432 2235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+++++|..++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988888764 3446899999999999999999999999 9999999999999999999999999987655432
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh--hhh-----ccchh---hhh----------
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD--MIR-----GENLN---LLM---------- 282 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~-----~~~~~---~~~---------- 282 (508)
...++..|+|||++.+ ..++.++||||||+++|+|++|+.|+...... ... ..... ...
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456788999999876 45788999999999999999999776532110 000 00000 000
Q ss_pred ccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 283 DSHLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 283 ~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+...... ....+..+.+|+.+||..+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000 01235778999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=302.76 Aligned_cols=245 Identities=26% Similarity=0.379 Sum_probs=197.8
Q ss_pred cccccCCCCcccEEEEEEEcC-----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 73 NIVSESGEKAANVVYKGRLEN-----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.+++.||.|+||.||++.... +..||+|++...... ....+..|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 466788999999999999643 378999999765433 45689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc--
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-- 224 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 224 (508)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999996433333899999999999999999999999 99999999999999999999999999876554311
Q ss_pred ---cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 225 ---YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 225 ---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
..++..|+|||.+.+..++.++||||||+++++|++ |..|+..... ...............+...+.++.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEYLKKGYRLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCCCcCCHHHHH
Confidence 225678999999988889999999999999999999 5544432111 0011111111122233346778999
Q ss_pred HHHHhcccCCCCCCChHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L 323 (508)
++.+||..+|.+|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=304.69 Aligned_cols=247 Identities=20% Similarity=0.316 Sum_probs=200.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++.+.||.|+||+||+|.. .++..+++|++..... .....+.+|+++++.++|+||+++++.+..+...++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 577889999999999999994 4688899999865432 24567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCC-CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 149 PNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999965333 56899999999999999999999999 9999999999999999999999999986554332
Q ss_pred ----ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc---ccCCC-CCHHH
Q 010529 224 ----SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS---HLEGK-FSSEE 294 (508)
Q Consensus 224 ----~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~ 294 (508)
...++..|++||++... .++.++||||||+++|+|++|+.|+...... ......... ..... .....
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM----KVLMLTLQNDPPSLETGADYKKY 236 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh----hhHHHHhcCCCCCcCCccccccc
Confidence 23578899999998766 6888999999999999999999876432110 001111111 01100 01245
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+..+.+++.+||..||++|||+.+++.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 237 SKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 6789999999999999999999999875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=308.65 Aligned_cols=247 Identities=18% Similarity=0.216 Sum_probs=196.2
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeee------CCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCA------GDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~------~~~~ 141 (508)
..|++.+.||.|+||.||+|.. .+++.||+|.+.... .....+..|+.++.++ +|+||+++++++.. ....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 4567778899999999999995 568889999986543 2345788999999998 79999999999853 3567
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 99999999999999997655567889999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH
Q 010529 222 ----GKSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292 (508)
Q Consensus 222 ----~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
.....++..|+|||.+. +..++.++||||||+++|+|++|..|+.... . ..................
T Consensus 174 ~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~-~---~~~~~~~~~~~~~~~~~~ 249 (282)
T cd06636 174 TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH-P---MRALFLIPRNPPPKLKSK 249 (282)
T ss_pred cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC-H---HhhhhhHhhCCCCCCccc
Confidence 23456788999999975 3457889999999999999999997764321 0 010111111111111122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+..+.+|+.+||..||.+|||+.+++++
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 456789999999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=309.18 Aligned_cols=250 Identities=18% Similarity=0.217 Sum_probs=202.6
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|..++.||.|+||.||+|.. .++..||+|.+....... ...+.+|+.+++.++||||+++++++..+...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 45678889999999999995 568899999986543222 34688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 227 (508)
+. |+|.+.+.. ....+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+
T Consensus 107 ~~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 107 CL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 97 577777643 3556899999999999999999999999 99999999999999999999999999887766666778
Q ss_pred CCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 228 t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
+..|+|||++. ++.++.++||||||+++|+|++|+.|+..... ......+.............+..+.+++.+
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 259 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPTLQSNEWSDYFRNFVDS 259 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHhccCCCCCCccccHHHHHHHHH
Confidence 99999999974 45688899999999999999999987643211 000111111111111233456779999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhhc
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
||+.+|.+||++.++++++..+..
T Consensus 260 ~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 260 CLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred HccCCcccCcCHHHHHhChhhhcc
Confidence 999999999999999999877653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=310.29 Aligned_cols=250 Identities=17% Similarity=0.236 Sum_probs=203.7
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.....|.+++.||.|+||.||++.. .++..|++|.+........+.+.+|+.+++.++||||+++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 3446778889999999999999984 467889999986554445567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 96 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred ecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence 9999999999984 346889999999999999999999999 999999999999999999999999987654432
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh-ccccCCCCCHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM-DSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 300 (508)
....+++.|++||.+.+..++.++||||||+++|++++|+.|+...... ....... ........+...+..+.+
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQNPEKLSAIFRD 247 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh----hheeehhcCCCCCCCCccccCHHHHH
Confidence 2235778899999998888899999999999999999999876432110 0000000 111111123345677999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
++.+||..+|++||++.+++.+-.
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h~~ 271 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQHPF 271 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcCHH
Confidence 999999999999999999998843
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=310.85 Aligned_cols=242 Identities=18% Similarity=0.238 Sum_probs=196.6
Q ss_pred cccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 75 VSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
+..||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35679999999999995 46889999998765544456789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNL 229 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~ 229 (508)
.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++.
T Consensus 107 ~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 107 TDIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 99884 346899999999999999999999999 999999999999999999999999988643322 2346788
Q ss_pred CCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccC
Q 010529 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYE 309 (508)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 309 (508)
.|+|||.+.+..++.++||||||+++|||++|+.|+........ ...+...+..... .....+..+.+++.+||..|
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~ 259 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MRRIRDNLPPRVK--DSHKVSSVLRGFLDLMLVRE 259 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCCccc--cccccCHHHHHHHHHHccCC
Confidence 99999999888899999999999999999999987643211000 0001111111111 11234567889999999999
Q ss_pred CCCCCChHHHHHHH
Q 010529 310 PRERPSTKNLVVTL 323 (508)
Q Consensus 310 p~~Rps~~~il~~L 323 (508)
|.+|||+.+++++-
T Consensus 260 P~~Rpt~~~il~~~ 273 (292)
T cd06658 260 PSQRATAQELLQHP 273 (292)
T ss_pred hhHCcCHHHHhhCh
Confidence 99999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=295.70 Aligned_cols=244 Identities=20% Similarity=0.239 Sum_probs=196.5
Q ss_pred cccCCCCcccEEEEEE-EcCCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 75 VSESGEKAANVVYKGR-LENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
++.||.|+||+|++.. .++|+..|||+++.... .+..+++.|++...+- +.||||+++|.+..++..+|.||+|. .
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 6789999999999999 46699999999987654 4466899999887666 79999999999999999999999995 6
Q ss_pred CHHHHhh---ccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Ccc
Q 010529 152 TLAKHLF---HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSY 225 (508)
Q Consensus 152 sL~~~l~---~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~ 225 (508)
||+.+.+ ...+..+++...-.|..-.++||.||...-+||||||||+|||++..|.+||||||++..+..+ +..
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d 227 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD 227 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence 7765543 3356679999999999999999999998766999999999999999999999999999876654 445
Q ss_pred ccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc---ccC-CCCCHHHHHHHH
Q 010529 226 STNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS---HLE-GKFSSEEATQVV 299 (508)
Q Consensus 226 ~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~l~ 299 (508)
.|...|||||.+.. ..|+.+|||||||++|+|+.||+-|+..+.. .+ +.+.+++.. .+. ..-....+..+.
T Consensus 228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vf--eql~~Vv~gdpp~l~~~~~~~~~s~~~~ 304 (361)
T KOG1006|consen 228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VF--EQLCQVVIGDPPILLFDKECVHYSFSMV 304 (361)
T ss_pred cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HH--HHHHHHHcCCCCeecCcccccccCHHHH
Confidence 68899999999863 4589999999999999999999977654322 11 111111111 111 111123577899
Q ss_pred HHHHHhcccCCCCCCChHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.++..||.+|..+||.+.+++++
T Consensus 305 ~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 305 RFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHhhcccccCcchhhhhcC
Confidence 99999999999999999999876
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-39 Score=306.03 Aligned_cols=243 Identities=18% Similarity=0.263 Sum_probs=199.5
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
|.+++.||.|+||.||+|.. .++..||||.+..... .....+.+|+.++..++||||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 56778899999999999985 4688899998864332 223578899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSY 225 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 225 (508)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999884 456899999999999999999999999 999999999999999999999999998754432 223
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
.++..|+|||.+.+..++.++||||||+++|+|++|..|+..... ......+........+...+..+.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCCCCCCCcccCHHHHHHHHHH
Confidence 578889999999888889999999999999999999977543211 001111111112223344567799999999
Q ss_pred cccCCCCCCChHHHHHHH
Q 010529 306 LQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 306 l~~~p~~Rps~~~il~~L 323 (508)
|..+|.+||++.+++++-
T Consensus 237 l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 237 LNKEPSFRPTAKELLKHK 254 (277)
T ss_pred ccCChhhCcCHHHHHhCH
Confidence 999999999999999973
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=311.18 Aligned_cols=244 Identities=19% Similarity=0.235 Sum_probs=198.6
Q ss_pred cccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 75 VSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
...||.|+||.||++.. .+++.||+|.+........+.+.+|+.++..++||||+++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 44679999999999995 56889999998765545566789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNL 229 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~ 229 (508)
..++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....++.
T Consensus 106 ~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 106 TDIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred HHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 99874 456899999999999999999999999 999999999999999999999999988644322 2346788
Q ss_pred CCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc-ccCCCCCHHHHHHHHHHHHHhccc
Q 010529 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS-HLEGKFSSEEATQVVGLASQCLQY 308 (508)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~ 308 (508)
.|+|||++.+..++.++||||||+++|+|++|+.|+...... .....+... ..........+..+.+++.+||..
T Consensus 182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 257 (297)
T cd06659 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTR 257 (297)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcC
Confidence 999999998888999999999999999999999876432100 000010000 000111223456789999999999
Q ss_pred CCCCCCChHHHHHHHHHh
Q 010529 309 EPRERPSTKNLVVTLARL 326 (508)
Q Consensus 309 ~p~~Rps~~~il~~L~~~ 326 (508)
+|.+||++.+++++-.-.
T Consensus 258 ~P~~Rps~~~ll~~~~~~ 275 (297)
T cd06659 258 EPQERATAQELLDHPFLL 275 (297)
T ss_pred CcccCcCHHHHhhChhhc
Confidence 999999999999985444
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=306.14 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=202.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++++.||.|++|.||++... +++.|++|.+..... .....+.+|++++++++||||+++++++......++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4677888999999999999965 588899999876543 23457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Ccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSY 225 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~ 225 (508)
++++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ...
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 82 DGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred CCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 999999998642 2678999999999999999999999 88 999999999999999999999999998754332 225
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-ccchhhhhccccCCCCCHH-HHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-GENLNLLMDSHLEGKFSSE-EATQVVGLAS 303 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~ 303 (508)
.++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... .......... .....+.. .+.++.+++.
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~ 238 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFVN 238 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHHH
Confidence 6788999999998888999999999999999999999876543100000 0001111111 11122222 6778999999
Q ss_pred HhcccCCCCCCChHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L 323 (508)
+||..+|.+|||+.+++.+-
T Consensus 239 ~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 239 LCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred HHcCCCchhCcCHHHHhhCc
Confidence 99999999999999999773
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=303.88 Aligned_cols=244 Identities=16% Similarity=0.167 Sum_probs=195.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-----ChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-----DPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
+|.+.+.||.|+||.||+|.. .++..||||.+...... ..+.+.+|+.+++.++||||+++++++.+. ..++
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 466778899999999999995 55889999988643211 134688899999999999999999988663 4578
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
+||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 99999999999999863 345888999999999999999999999 99999999999999999999999998875432
Q ss_pred ------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 222 ------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 222 ------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.....++..|+|||++.+..++.++||||||+++|+|++|+.|+..... ................+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFKIATQPTNPVLPPHVS 235 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHHHhcCCCCCCCchhhC
Confidence 1234578899999999888889999999999999999999987643210 011111111222233455667
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+.+++.+||. +|.+||++.+++++
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 788999999995 99999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=310.41 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=196.8
Q ss_pred ccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChh--HHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPT--QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|++++.||+|+||+||++.... ++.||+|.+......... ...+|+.++++++||||+++++++......++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5778899999999999999654 668999999766533222 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC----CCCc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM----DGKS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~----~~~~ 224 (508)
.+++|.+++. ....+++..+..++.||++||.+||+.+ ++|+||||+||+++.++.++|+|||.+.... ....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9989999996 3567899999999999999999999999 9999999999999999999999999987531 1234
Q ss_pred cccCCCCCCccccc-cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC--HHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLK-NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS--SEEATQVVGL 301 (508)
Q Consensus 225 ~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l 301 (508)
..++..|+|||++. +..++.++||||||+++|+|++|..|+...... -.................. ......+.++
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 236 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEIIEKILKRPLPSSSQQSREKSEELRDL 236 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHHHHHHHTHHHHHTTSHTTSHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccch-hhhhhhhhcccccccccccccchhHHHHHHH
Confidence 56788999999998 788899999999999999999999876543000 0000000000000000000 1113789999
Q ss_pred HHHhcccCCCCCCChHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+||+.||++|||+.+++++
T Consensus 237 i~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 237 IKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=302.69 Aligned_cols=246 Identities=19% Similarity=0.236 Sum_probs=201.5
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee--CCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~lv~ 145 (508)
+|++++.||.|+||.||++. ..++..||+|.+...... ..+.+..|+.+++.++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 36788999999999999999 456888999998654322 24568899999999999999999998764 34678999
Q ss_pred ecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHH-----hCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 146 EYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCN-----TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 146 E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH-----~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
||+++++|.+++... ....+++..++.++.||+.||.||| +.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999998642 2457899999999999999999999 888 99999999999999999999999999886
Q ss_pred cCCCC----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHH
Q 010529 219 SMDGK----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 219 ~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (508)
..... ...++..|+|||.+.+..++.++||||||+++++|++|+.|+...... .....+........+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 234 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASKIKEGKFRRIPYRY 234 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHHHhcCCCCCCcccc
Confidence 65433 346788999999998888899999999999999999999876432111 111112222223345566
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+..+.+++.+||..+|.+|||+.+|+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 7889999999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=309.78 Aligned_cols=248 Identities=19% Similarity=0.215 Sum_probs=193.6
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+++.||.|+||.||+|+. .+|..||+|.+...... ....+.+|+.+++.++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 67788899999999999995 46889999998653221 2346888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
. ++|.+++.. ....+++..+..++.||++||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred C-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 6 578887754 3456899999999999999999999999 999999999999999999999999998755432 22
Q ss_pred cccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhh--hhh-------cc------chhhhhccccCC
Q 010529 225 YSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALD--MIR-------GE------NLNLLMDSHLEG 288 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~-------~~------~~~~~~~~~~~~ 288 (508)
..++..|+|||++.+. .++.++||||||+++|+|+||..|+...... ... .. ......+.....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 3567889999998764 4688999999999999999998875322100 000 00 000000000000
Q ss_pred ---------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 289 ---------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 289 ---------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......+.++.+++.+||..||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0112345778899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=303.92 Aligned_cols=244 Identities=17% Similarity=0.205 Sum_probs=194.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-----ChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-----DPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
.|...+.||.|+||.||+|.. .++..|++|++...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 356678889999999999995 56889999988643221 134688899999999999999999988653 5678
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 83 IFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 99999999999999863 346899999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 -------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
....++..|+|||++.+..++.++||||||+++|+|++|+.|+..... ................+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~ 235 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHIS 235 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCCCCCCchhcC
Confidence 223478889999999888899999999999999999999977643210 111111111122233445556
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+.+++ +||..+|++|||+.+++.|
T Consensus 236 ~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 236 EHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 7778887 6888899999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=304.66 Aligned_cols=248 Identities=21% Similarity=0.244 Sum_probs=195.1
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC----------hhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD----------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
|.+.+.||.|+||.||+|.. .+++.||||.+....... .+.+..|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 56678899999999999984 568899999885422111 2357889999999999999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999864 357899999999999999999999999 9999999999999999999999999987543
Q ss_pred CC------CccccCCCCCCccccccCC--cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH
Q 010529 221 DG------KSYSTNLAYTPPEYLKNGR--VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292 (508)
Q Consensus 221 ~~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
.. ....++..|+|||.+.... ++.++||||||+++|++++|..|+...........................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 22 2235778899999987654 788999999999999999999776422110000000000000111111222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+..+.+++.+||..+|.+|||+.+++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 346789999999999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=306.87 Aligned_cols=249 Identities=15% Similarity=0.182 Sum_probs=195.1
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeee-----eCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCC-----AGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~-----~~~~~ 141 (508)
..+|++++.||+|+||.||+|.. .+++.+|+|++.... .....+..|+.+++.+ +||||+++++++. .++..
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 44567889999999999999995 458889999886432 2245788999999999 7999999999884 34568
Q ss_pred eeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 142 LLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeec
Confidence 9999999999999987532 3456889999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCC
Q 010529 220 MDG----KSYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGK 289 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 289 (508)
... ....+++.|+|||++.. ..++.++|||||||++|+|++|+.|+...... .......... ....
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~ 250 (286)
T cd06638 175 TSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----RALFKIPRNPPPTLH 250 (286)
T ss_pred ccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh----HHHhhccccCCCccc
Confidence 332 23457889999999853 45788999999999999999999876432110 0000000000 0001
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+...+..+.+++.+||+.+|++|||+.++++++
T Consensus 251 ~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 251 QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1222456799999999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=332.18 Aligned_cols=254 Identities=16% Similarity=0.173 Sum_probs=186.0
Q ss_pred CCcccccccCCCCcccEEEEEEEcC--CCEEEEEEec--------------C---CCCCChhHHHHHHHHhccCCCCCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN--RQWIAVKKFT--------------K---VAWPDPTQFKEEAEGVGKLRRKRLA 129 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~h~nIv 129 (508)
...|+++++||+|+||.||++.++. +..+++|.+. + ........+.+|+.+|++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4578999999999999999987532 2222222110 0 1111234688999999999999999
Q ss_pred ceeeeeeeCCcceeeeecCCCCCHHHHhhccC---CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC
Q 010529 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWE---KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 130 ~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~ 206 (508)
++++++...+..|+|+|++. ++|.+++.... ........+..|+.||+.||.|||+++ ||||||||+|||++.++
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDG 304 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999995 67777764321 122345677889999999999999999 99999999999999999
Q ss_pred CeEEcccCCccccCCC-----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh-----hh---h
Q 010529 207 DPRLSCFGLMKNSMDG-----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL-----DM---I 273 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-----~~---~ 273 (508)
.+||+|||++...... ....||..|+|||++.+..++.++|||||||++|||++|..+|..... .. .
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 9999999999765433 234689999999999988999999999999999999999865543210 00 0
Q ss_pred hc-----cc-------hhhhhccccC----CCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 274 RG-----EN-------LNLLMDSHLE----GKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 274 ~~-----~~-------~~~~~~~~~~----~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.. .. ....+..... ..++ ...+.++.+++.+||..||.+|||+.|++.+-+
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 00 00 0000000000 0000 012356778899999999999999999998744
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=308.39 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=200.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.|.+++.||.|+||.||++.. .+++.||+|++..... .....+.+|++++++++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 578889999999999999995 4688999999865322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 225 (508)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|.|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999863 467899999999999999999999999 999999999999999999999999998765544 334
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHh
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 305 (508)
.+++.|+|||.+.+...+.++||||||+++|+|++|+.|+...... .....+... ....+...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~--~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QIYEKILEG--KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhcC--CccCCccCCHHHHHHHHHH
Confidence 5788999999998888889999999999999999999876432210 001111111 1123344567899999999
Q ss_pred cccCCCCCC-----ChHHHHHH
Q 010529 306 LQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 306 l~~~p~~Rp-----s~~~il~~ 322 (508)
|..||.+|+ ++.+++.+
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcC
Confidence 999999998 77777766
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=301.34 Aligned_cols=244 Identities=20% Similarity=0.254 Sum_probs=198.5
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-----CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-----PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
|+..+.||.|++|.||+|... ++..|++|.+..... ...+.+.+|+.+++.++|+||+++++++..+...++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 455678899999999999965 788999999865332 12457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 99999999999863 346899999999999999999999999 999999999999999999999999988754433
Q ss_pred CccccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....++..|++||.+.... ++.++|+||||+++|+|++|+.|+..... . ...............+...+..+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-V---AAVFKIGRSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-H---HHHHHHHhcccCCCcCCCcCHHHHHH
Confidence 3455788899999987666 88999999999999999999987643210 0 00011111011122344456788999
Q ss_pred HHHhcccCCCCCCChHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+||..+|.+|||+.+++.+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcC
Confidence 999999999999999999865
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=306.37 Aligned_cols=249 Identities=20% Similarity=0.288 Sum_probs=197.2
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|.+.+.||.|++|.||+|.. .++..||||++..... .....+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 367889999999999999995 4688999999876542 2246799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+ +++|.+++.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 9999998864 3367999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----h---c---------cc---hhhh
Q 010529 224 -SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----R---G---------EN---LNLL 281 (508)
Q Consensus 224 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----~---~---------~~---~~~~ 281 (508)
...++..|+|||++.+. .++.++||||||+++++|+||.+++........ . . .. ...+
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 34578899999998654 468899999999999999999755543211000 0 0 00 0000
Q ss_pred hccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 282 MDSHLE----GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 282 ~~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... .......+..+.+++.+||..+|.+|||+.+++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 00111335789999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=309.07 Aligned_cols=248 Identities=18% Similarity=0.144 Sum_probs=197.6
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.|.+++.||.|+||.||++... +++.|++|.+..... .....+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 5678899999999999999954 578899999875432 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999963 356899999999999999999999999 999999999999999999999999987631110
Q ss_pred ---------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc-
Q 010529 223 ---------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL- 286 (508)
Q Consensus 223 ---------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (508)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+......... ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~----~~~~~~~~~ 234 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF----GQVISDDIE 234 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhcccC
Confidence 1234677899999998888999999999999999999999887543211111 11111100
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
........+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111112356778999999999999999997666555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=308.65 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=195.7
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|++++.||.|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..+...++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 4678899999999999999965 5889999988654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
+++++|..+.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99999988765 3345899999999999999999999999 999999999999999999999999998755433 2
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-----hh--c---cchhhhh------cccc
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-----IR--G---ENLNLLM------DSHL 286 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~--~---~~~~~~~------~~~~ 286 (508)
...++..|+|||++.+ ..++.++||||||+++|+|++|++|+....... .. . ....... ....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 2456788999999865 446789999999999999999987664321100 00 0 0000000 0000
Q ss_pred CCC---------CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 287 EGK---------FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 287 ~~~---------~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
... .....+..+.+|+.+||..+|++||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000 012346779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=300.20 Aligned_cols=245 Identities=18% Similarity=0.287 Sum_probs=198.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|++.+.||.|+||.||+|.. .+++.|++|.++..... ....+..|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 367788999999999999995 46889999999765543 456799999999999999999999999989999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 999999999863 445889999999999999999999999 9999999999999999999999999987654321
Q ss_pred ----ccccCCCCCCccccccCC---cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH--HH
Q 010529 224 ----SYSTNLAYTPPEYLKNGR---VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS--EE 294 (508)
Q Consensus 224 ----~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 294 (508)
...++..|++||++.+.. ++.++||||||+++|+|++|+.|+........ .............+. ..
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 233 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ----IMFHVGAGHKPPIPDSLQL 233 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH----HHHHHhcCCCCCCCccccc
Confidence 234678899999998765 78899999999999999999987643211000 000000011112222 23
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 6778999999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=301.21 Aligned_cols=252 Identities=15% Similarity=0.134 Sum_probs=194.8
Q ss_pred HHHHHHhcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeee
Q 010529 60 LDLRAATNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCA 137 (508)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~ 137 (508)
.++....++|..++.++ ||.|+||.||++.. .++..+|+|.+........ |+.....+ +||||+++++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34444444444333333 59999999999994 5688899999865432211 22222222 79999999999999
Q ss_pred CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCc
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLM 216 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a 216 (508)
.+..++||||+++++|.+++.. ...+++..+..++.||++||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999999963 348999999999999999999999999 99999999999999888 9999999998
Q ss_pred cccCCCCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 217 KNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 217 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
..........++..|+|||++.+..++.++||||||+++|+|++|+.|+............+...... ....+...+.
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSK 235 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCH
Confidence 87766666778999999999988889999999999999999999998765322111111111111111 1122335678
Q ss_pred HHHHHHHHhcccCCCCCCC-hHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPS-TKNLVVT 322 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps-~~~il~~ 322 (508)
.+.+++.+||+.+|.+||+ +.++++|
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 236 NANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHHHhccChhhCCchHHHHhcC
Confidence 8999999999999999995 6999865
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=343.00 Aligned_cols=242 Identities=18% Similarity=0.211 Sum_probs=201.3
Q ss_pred cccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 75 VSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
...||.|.||.||-|. ..+|...|||-++..... ..+.+.+|+.++..+.|||+|+++|+=.+.+..+|.||||.||
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 4466999999999999 677999999998765433 2457899999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--------C
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--------K 223 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--------~ 223 (508)
+|.+.+. .++..++.....+..|++.|+.|||++| ||||||||.||+++.+|.+|++|||.|...... .
T Consensus 1320 sLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~ 1396 (1509)
T KOG4645|consen 1320 SLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQ 1396 (1509)
T ss_pred cHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHH
Confidence 9999996 3445677777788999999999999999 999999999999999999999999999866554 2
Q ss_pred ccccCCCCCCccccccC---CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNG---RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
...||+.|||||++.+. ....++||||||||++||+||++|+.....++ .+..-+...-.+.+|...+.+-.+
T Consensus 1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~----aIMy~V~~gh~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW----AIMYHVAAGHKPQIPERLSSEGRD 1472 (1509)
T ss_pred hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh----HHHhHHhccCCCCCchhhhHhHHH
Confidence 45799999999999763 34568999999999999999999854321111 111112223345667778999999
Q ss_pred HHHHhcccCCCCCCChHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L 323 (508)
|+.+||..||..|.++.+++++-
T Consensus 1473 Fle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred HHHHHHhcCchhhhHHHHHHHhh
Confidence 99999999999999999888773
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=310.58 Aligned_cols=243 Identities=16% Similarity=0.218 Sum_probs=182.6
Q ss_pred ccCCCCcccEEEEEEEc---CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee--CCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~lv~E~~~~ 150 (508)
.+||.|+||.||+|+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 46899999999999964 35689999986543 23468899999999999999999999854 456789999996
Q ss_pred CCHHHHhhcc-------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee----CCCCCeEEcccCCcccc
Q 010529 151 DTLAKHLFHW-------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF----DEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 151 ~sL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~Dfg~a~~~ 219 (508)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 5787776421 1235888999999999999999999999 9999999999999 56678999999999755
Q ss_pred CCC-------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-----------------
Q 010529 220 MDG-------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR----------------- 274 (508)
Q Consensus 220 ~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~----------------- 274 (508)
... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.....+...
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 23467889999999876 45788999999999999999999776422110000
Q ss_pred ---ccchhh---------hhccccCC------------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 275 ---GENLNL---------LMDSHLEG------------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 275 ---~~~~~~---------~~~~~~~~------------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... ........ .........+.+|+.+||..||.+|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000 00000000 0001123457889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=304.90 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=194.5
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHH-hccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEG-VGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|.+++.||.|+||.||+|.. .+|..||+|+++.... ....++..|+.+ ++.++||||+++++++..++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 567889999999999999995 4689999999875432 223456667665 5566999999999999999999999999
Q ss_pred CCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
++ ++|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 96 6888877542 335689999999999999999999997 7 999999999999999999999999998765432
Q ss_pred -CccccCCCCCCcccccc----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKN----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+....... ...................+.+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF---QQLKQVVEEPSPQLPAEKFSPE 236 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH---HHHHHHHhcCCCCCCccccCHH
Confidence 22457889999998864 446889999999999999999998764211100 1111111111111112235678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.+++.+||..+|.+|||+.+++.+-+-
T Consensus 237 l~~li~~~l~~~p~~Rp~~~~il~~~~~ 264 (283)
T cd06617 237 FQDFVNKCLKKNYKERPNYPELLQHPFF 264 (283)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCchh
Confidence 9999999999999999999999987433
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=301.63 Aligned_cols=248 Identities=18% Similarity=0.250 Sum_probs=197.2
Q ss_pred ccccccCCCCcccEEEEEEEcC--CCEEEEEEecCCCCC----------ChhHHHHHHHHhcc-CCCCCCcceeeeeeeC
Q 010529 72 DNIVSESGEKAANVVYKGRLEN--RQWIAVKKFTKVAWP----------DPTQFKEEAEGVGK-LRRKRLANLIGYCCAG 138 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~-l~h~nIv~~~~~~~~~ 138 (508)
|.+.+.||.|+||.||+|.... +..+|||.+...... ...++..|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5678889999999999999654 788999988643211 12457788888865 6999999999999999
Q ss_pred CcceeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 139 DERLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
+..++||||++|++|.+++... ....+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999887432 34568999999999999999999996 56 99999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH
Q 010529 216 MKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292 (508)
Q Consensus 216 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+...... ....++..|++||.+.+..++.++||||||+++|+|++|+.|+........ ...+...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL----ATKIVEAVYEPLPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH----HHHHhhccCCcCCcc
Confidence 8765443 234578899999999888899999999999999999999877543211100 011111111111112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+..+.+++.+||+.||++||++.++..++.
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 34577999999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=305.31 Aligned_cols=251 Identities=21% Similarity=0.292 Sum_probs=194.1
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
...|++++.||.|++|.||+|... +++.||||.+...... ....+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 457888999999999999999954 6889999998754322 23457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 84 ~~~-~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 84 YLD-TDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred cCC-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 997 589998864 3347899999999999999999999999 999999999999999999999999998654321
Q ss_pred CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhh--hhhh----------ccchhhhhc------
Q 010529 223 KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHAL--DMIR----------GENLNLLMD------ 283 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~~----------~~~~~~~~~------ 283 (508)
....++..|+|||++.+ ..++.++||||||+++|+|++|+.|+..... +... .........
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 22345788999999875 4578899999999999999999977643210 0000 000000000
Q ss_pred ---cccCCC----CCHHH--HHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 ---SHLEGK----FSSEE--ATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ---~~~~~~----~~~~~--~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... ..... ...+.+++.+||..+|.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000 00011 2667899999999999999999999865
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=308.43 Aligned_cols=248 Identities=20% Similarity=0.254 Sum_probs=194.0
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++..++.||.|+||.||++.. .+++.||+|.+...... ....+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 445667899999999999995 45899999998754322 3457889999999995 99999999999988899999999
Q ss_pred CCCCCHHHHh---hccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 148 MPNDTLAKHL---FHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 148 ~~~~sL~~~l---~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
+. ++|.++. .......+++..+..++.|++.||.|||+. + ++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 86 5665543 222346799999999999999999999985 7 999999999999999999999999998754332
Q ss_pred --CccccCCCCCCccccccC---CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc---cccCCCCCHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNG---RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD---SHLEGKFSSEE 294 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 294 (508)
....++..|+|||++.+. .++.++||||||+++|+|++|+.|+..... .. ........ ..+....+...
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd06616 163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VF--DQLTQVVKGDPPILSNSEEREF 239 (288)
T ss_pred ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HH--HHHhhhcCCCCCcCCCcCCCcc
Confidence 234578899999998765 688999999999999999999987643211 00 00111110 11111222346
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+..+.+|+.+||..+|++|||+.+|+.+-
T Consensus 240 ~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 240 SPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 77899999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=302.62 Aligned_cols=247 Identities=16% Similarity=0.255 Sum_probs=199.5
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
|+..+.||.|++|.||++. ..++..||+|++...... ..+.+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 4566788999999999999 467889999998643321 135789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~~- 222 (508)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++ .++|+|||.+......
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 82 VEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 999999999999863 457899999999999999999999999 99999999999998776 5999999998654332
Q ss_pred -------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 -------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
....++..|+|||.+.+..++.++||||||+++++|++|..|+........ ................+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHHHHhccCCCCCCchhhC
Confidence 123567899999999888889999999999999999999977642211000 000111111122334555677
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+++.+++.+||..+|.+|||+.+++.+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 889999999999999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=302.88 Aligned_cols=244 Identities=19% Similarity=0.206 Sum_probs=201.0
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|++.+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 678889999999999999964 588899999975432 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Cc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KS 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~ 224 (508)
+.|++|.+++.. ...+++..+..|+.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999963 357899999999999999999999999 999999999999999999999999998765543 33
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..++..|+|||.+.+..++.++||||||+++|+|++|..|+...... ........... .....+...+..+.+++.+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 235 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQET-ADVLYPATWSTEAIDAINK 235 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcc-ccccCcccCcHHHHHHHHH
Confidence 45778899999998888899999999999999999999886543210 00001111111 2223444567889999999
Q ss_pred hcccCCCCCCCh--HHHHH
Q 010529 305 CLQYEPRERPST--KNLVV 321 (508)
Q Consensus 305 cl~~~p~~Rps~--~~il~ 321 (508)
||..||.+||++ .+++.
T Consensus 236 ~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 236 LLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HccCChhHcCCccHHHHhc
Confidence 999999999999 66654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=304.00 Aligned_cols=254 Identities=18% Similarity=0.215 Sum_probs=199.5
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~lv~E 146 (508)
.|..++.||.|++|.||+|.. .+++.||+|.+..... .....+.+|+++++.++||||++++++|... +.+++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 456788999999999999996 4588899999875433 2345799999999999999999999998653 46899999
Q ss_pred cCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 147 YMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|++|++|.+++... ....+++..+..++.||+.||.|||+.+ ++|+||+|.||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 99999999887432 3456889999999999999999999999 999999999999999999999999998754432
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-ccchhhhhc---cccCCCCC--HHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-GENLNLLMD---SHLEGKFS--SEEAT 296 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~--~~~~~ 296 (508)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+......... ......+.. ..+..... ...++
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHH
Confidence 2345678899999998888999999999999999999999876543110000 000111111 00000111 23467
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+.+++.+||..+|.+|||+.+++++-+-
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 89999999999999999999999988544
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=311.53 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=214.1
Q ss_pred hcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
.+.+.-|.+++.||+|.|+.|.+++ ..++..||||.+.+..... ...+.+|+++|..|+|||||+++.+......+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 3456678899999999999999999 4568889999997754433 346899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+.+|.+++++. ..+.+.+..+..++.|+++|++|||++. |+|||||.+||||+.+.++||+|||++..+..+
T Consensus 132 lV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeeccc
Confidence 9999999999999997 4566777999999999999999999999 999999999999999999999999999877654
Q ss_pred ---CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC--CCHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEEAT 296 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 296 (508)
.+++|++.|.|||++.+..| .+.+|+||+|++||-|+.|..||.+ ..+..+-++.+.+. ++...+.
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG--------~~lk~Lr~rvl~gk~rIp~~ms~ 280 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG--------QNLKELRPRVLRGKYRIPFYMSC 280 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC--------cccccccchheeeeecccceeec
Confidence 57889999999999998777 6799999999999999999998654 33333333333332 2334566
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+..+++.++|.++|.+|+++.+++++-|.-
T Consensus 281 dce~lLrk~lvl~Pskr~~~dqim~~~W~n 310 (596)
T KOG0586|consen 281 DCEDLLRKFLVLNPSKRGPCDQIMKDRWRN 310 (596)
T ss_pred hhHHHHHHhhccCccccCCHHHhhhhcccc
Confidence 788999999999999999999999986553
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=303.18 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=203.6
Q ss_pred cCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+....|.+...||.|++|.||+|... ++..|++|++..... ....+.+|+++++.++|+||+++++++......++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 34445677788999999999999965 688899999976543 4567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 172 (286)
T cd06614 95 EYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK 172 (286)
T ss_pred eccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence 9999999999996422 37999999999999999999999999 999999999999999999999999987644332
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC-CCCHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG-KFSSEEATQVVG 300 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 300 (508)
....++..|++||++.+..++.++||||||+++|+|++|+.|+...... ............. ..+...+..+.+
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RALFLITTKGIPPLKNPEKWSPEFKD 248 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCCCcchhhCCHHHHH
Confidence 2334678899999998888899999999999999999999775422100 0001111111111 112225678999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
++.+||+.+|.+|||+.+++.+..-
T Consensus 249 li~~~l~~~p~~Rpt~~~il~~~~~ 273 (286)
T cd06614 249 FLNKCLVKDPEKRPSAEELLQHPFL 273 (286)
T ss_pred HHHHHhccChhhCcCHHHHhhChHh
Confidence 9999999999999999999987443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=301.53 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=197.1
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCC------cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGD------ER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~------~~ 141 (508)
++|++++.||.|++|.||+|... +++.+++|++..... ....+.+|+.+++++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 56788899999999999999964 578899999875542 346799999999999 7999999999997644 47
Q ss_pred eeeeecCCCCCHHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 142 LLVAEYMPNDTLAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999886433 467899999999999999999999999 999999999999999999999999998654
Q ss_pred CCC----CccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc-CCC
Q 010529 220 MDG----KSYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL-EGK 289 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 289 (508)
... ....++..|+|||++.. ..++.++||||||+++|+|++|+.|+..... ......+..... ...
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~ 239 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP----MRALFKIPRNPPPTLK 239 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch----HHHHHHhhccCCCCCC
Confidence 332 23457889999998753 3467899999999999999999987643210 011111111111 111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+...+..+.+|+.+||..||++|||+.+++++
T Consensus 240 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 240 SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 122356789999999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=302.09 Aligned_cols=246 Identities=17% Similarity=0.253 Sum_probs=198.0
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCC---CCCCcceeeeeeeCCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLR---RKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.|++++.||.|+||.||+|.. .++..||||.+..... ....++.+|+.+++.+. ||||+++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 356778899999999999995 5688999999865432 33567889999999986 999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||++|++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 82 EYAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred ecCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 9999999999884 347899999999999999999999999 999999999999999999999999998765443
Q ss_pred -CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH-HHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS-EEATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 299 (508)
....++..|+|||.+.++ .++.++||||||+++|+|++|..|+....... .. ...........+. ..+.++.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 232 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR----AM-MLIPKSKPPRLEDNGYSKLLR 232 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh----hh-hccccCCCCCCCcccCCHHHH
Confidence 234578889999998754 46889999999999999999998764321100 00 0011111111122 2567899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+++.+||..||++||++.+++.+-+-
T Consensus 233 ~~i~~~l~~~p~~R~~~~~il~~~~~ 258 (277)
T cd06917 233 EFVAACLDEEPKERLSAEELLKSKWI 258 (277)
T ss_pred HHHHHHcCCCcccCcCHHHHhhChHh
Confidence 99999999999999999999986443
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=299.97 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=193.3
Q ss_pred ccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 72 DNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
|.+.+.||+|+||.||+|.+. +++.||||.+...... ..+++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456778999999999999853 3678999998654322 2457889999999999999999999886532
Q ss_pred cceeeeecCCCCCHHHHhhcc----CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 140 ERLLVAEYMPNDTLAKHLFHW----EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
..++++||+.+++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccc
Confidence 247889999999998887421 1235788999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCC
Q 010529 216 MKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEG 288 (508)
Q Consensus 216 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (508)
+....... ...+++.|++||.+.+..++.++||||||+++|+|++ |..|+...... .....+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~ 234 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-----EIYNYLIKGNRL 234 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-----HHHHHHHcCCcC
Confidence 88654322 2234567999999988888999999999999999999 66554322110 000001011111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
..+...+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus 235 ~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 12234557899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=299.41 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=199.6
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+.+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|+.+++.++|+||+++++.+......++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 567788999999999999954 588899999865422 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC-eEEcccCCccccCCCC----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD-PRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~-~kl~Dfg~a~~~~~~~---- 223 (508)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++. ++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 9999999997545556899999999999999999999999 999999999999988764 6999999987654432
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...+++.|+|||++.+..++.++||||||+++|+|++|..|+....... ......... ........+.++.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ----LVLKICQGY-FAPISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHhccc-CCCCCCCCCHHHHHHHH
Confidence 2357888999999988889999999999999999999998764321110 111111111 11223345667999999
Q ss_pred HhcccCCCCCCChHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~ 322 (508)
+||..+|++|||+.+++.+
T Consensus 236 ~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 236 QLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=303.68 Aligned_cols=243 Identities=17% Similarity=0.236 Sum_probs=196.6
Q ss_pred cccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 73 NIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.....||.|++|.||++.. .+++.|++|++........+.+.+|+.+++.++||||+++++++...+..++|+||++|+
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~ 101 (285)
T cd06648 22 DNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG 101 (285)
T ss_pred hcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence 3346779999999999995 568889999986554444567899999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYST 227 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 227 (508)
+|.+++.. ..+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||.+...... ....+
T Consensus 102 ~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 177 (285)
T cd06648 102 ALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG 177 (285)
T ss_pred CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccC
Confidence 99999853 56899999999999999999999999 999999999999999999999999987644322 23457
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
+..|+|||.+.+..++.++||||||+++|+|++|+.|+........ ............ ..+...+..+.+++.+||.
T Consensus 178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~ 254 (285)
T cd06648 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-MKRIRDNLPPKL--KNLHKVSPRLRSFLDRMLV 254 (285)
T ss_pred CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-HHHHHhcCCCCC--cccccCCHHHHHHHHHHcc
Confidence 8899999999888899999999999999999999987643210000 000000000000 1122245779999999999
Q ss_pred cCCCCCCChHHHHHH
Q 010529 308 YEPRERPSTKNLVVT 322 (508)
Q Consensus 308 ~~p~~Rps~~~il~~ 322 (508)
.+|++|||+.+++++
T Consensus 255 ~~p~~Rpt~~~il~~ 269 (285)
T cd06648 255 RDPAQRATAAELLNH 269 (285)
T ss_pred cChhhCcCHHHHccC
Confidence 999999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=298.99 Aligned_cols=247 Identities=23% Similarity=0.286 Sum_probs=203.9
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++.+.||.|++|.||+|... +++.|+||++..... .....+.+|+..+..++|+||+++++++......++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 4677889999999999999965 589999999876543 23568999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
++++|.+++.. ...+++..++.++.|+++||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 82 DGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 99999999963 3678999999999999999999999 99 9999999999999999999999999987654432
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH-HHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE-EATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~ 302 (508)
...++..|+|||.+.+..++.++||||||+++|+|+||+.|+........ ......+... .....+.. .+..+.+++
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li 236 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF-FELMQAICDG-PPPSLPAEEFSPEFRDFI 236 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH-HHHHHHHhcC-CCCCCCcccCCHHHHHHH
Confidence 34578899999999888889999999999999999999987643311000 0011111111 11222333 667899999
Q ss_pred HHhcccCCCCCCChHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~ 322 (508)
.+||..+|.+|||+.+++++
T Consensus 237 ~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 237 SACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHccCChhhCCCHHHHHhC
Confidence 99999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=304.32 Aligned_cols=249 Identities=22% Similarity=0.262 Sum_probs=195.0
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|++++.||.|++|.||+|.. .++..||||++...... ....+.+|++++++++||||+++++++.+....++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 67788999999999999995 46889999998654322 2357889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
. ++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 68998886555667899999999999999999999999 999999999999999999999999998754332 22
Q ss_pred cccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-------chhh-------------hhc
Q 010529 225 YSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-------NLNL-------------LMD 283 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-------~~~~-------------~~~ 283 (508)
..++..|+|||++.+.. ++.++||||||+++|+|+||+.|+........... .... .+.
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887644 58899999999999999999987654311000000 0000 000
Q ss_pred cccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000 0011234668899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=304.58 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=196.1
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
....|.+++.||.|+||.||+|... +++.|++|.++...... ...+.+|+.++++++||||+++++++... ...+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 3456788899999999999999965 58889999997543222 33577899999999999999999998877 7899
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 lv~e~~~-~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVE-HDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcC-cCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 9999997 589888854 2346899999999999999999999999 999999999999999999999999998765443
Q ss_pred ----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc----------------------
Q 010529 223 ----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG---------------------- 275 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---------------------- 275 (508)
....+++.|+|||.+.+. .++.++||||||+++|+|++|..|+..........
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 233467889999998754 46889999999999999999987764321100000
Q ss_pred ---cchhhhhccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 276 ---ENLNLLMDSHLEGKFSSE-EATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 276 ---~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..........+...++.. .++.+.+++.+||+.+|++|||+.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000000111112222 36778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=304.72 Aligned_cols=249 Identities=20% Similarity=0.304 Sum_probs=196.7
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|++.+.||.|++|.||+|... +++.|+||+++.... ...+.+.+|+++++.++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5778889999999999999954 588999999865432 2246799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
++++.|..+.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 3456899999999999999999999999 9999999999999999999999999987655432
Q ss_pred -ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhh--hh-----cc---chhhhh--cccc---
Q 010529 224 -SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDM--IR-----GE---NLNLLM--DSHL--- 286 (508)
Q Consensus 224 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--~~-----~~---~~~~~~--~~~~--- 286 (508)
...++..|+|||++.+. .++.++||||||+++|+|++|+.|+....... .. +. .....+ ....
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 78899999999999999999997765321100 00 00 000000 0000
Q ss_pred -----------CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 287 -----------EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 287 -----------~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
....+...+.++.+|+.+||..+|++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 001122236789999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=297.53 Aligned_cols=240 Identities=20% Similarity=0.196 Sum_probs=196.6
Q ss_pred CCCCcccEEEEEEEc-CCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||.|++|.||+|+.. ++..||+|++...... ..+.+.+|+.+++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999964 4888999998754322 245799999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---CccccCCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLA 230 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~t~~ 230 (508)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999963 346899999999999999999999999 999999999999999999999999998866543 23457889
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEP 310 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p 310 (508)
|++||.+.+..++.++|+||||+++|+|++|..|+.....+. ......+.........+...+..+.+++.+||..+|
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 235 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--MEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP 235 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence 999999988888999999999999999999998764332100 011111221112223344447889999999999999
Q ss_pred CCCCC-----hHHHHHH
Q 010529 311 RERPS-----TKNLVVT 322 (508)
Q Consensus 311 ~~Rps-----~~~il~~ 322 (508)
.+||+ +.+++++
T Consensus 236 ~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 236 EERLGNLKGGIKDIKKH 252 (262)
T ss_pred hhCcCCcccCHHHHhcC
Confidence 99999 7888775
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=301.91 Aligned_cols=248 Identities=15% Similarity=0.155 Sum_probs=195.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeC-----Ccc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAG-----DER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~-----~~~ 141 (508)
-.+|.++..||.|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++... +..
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 34567888999999999999995 568899999986532 2345788999999999 899999999998753 357
Q ss_pred eeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 142 LLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~~kl~dfg~~~~~ 178 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGGVKLVDFGVSAQL 178 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence 9999999999999988532 3456899999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccCCCCCCccccccC-----CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCC
Q 010529 220 MDG----KSYSTNLAYTPPEYLKNG-----RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGK 289 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 289 (508)
... ....++..|+|||.+... .++.++|||||||++|+|++|+.|+...... .....+.... ..-.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~ 254 (291)
T cd06639 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----KTLFKIPRNPPPTLL 254 (291)
T ss_pred ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----HHHHHHhcCCCCCCC
Confidence 432 234578889999998643 3678999999999999999999776432110 0011111000 0001
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+...+..+.+++.+||..+|++||++.+++++
T Consensus 255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 123345679999999999999999999999976
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=282.88 Aligned_cols=245 Identities=17% Similarity=0.117 Sum_probs=197.8
Q ss_pred ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeee----CCcceeeeecCC
Q 010529 76 SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCA----GDERLLVAEYMP 149 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~----~~~~~lv~E~~~ 149 (508)
++||-|-.|.|-.+.. .+++.+|+|++.. .....+|++..-.. .|||||.++++|.+ ...+.+|||.|+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 5689999999999994 5688899999853 34567888887666 79999999999864 346789999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccccCCC---C
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNSMDG---K 223 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~~~~---~ 223 (508)
||.|...+.+...+.+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.+. |..+||+|||+|+..... .
T Consensus 143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 999999998877788999999999999999999999999 999999999999964 456999999999976643 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc--ccCCCCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS--HLEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l 301 (508)
+.+-|++|.|||++...+|+..+|+||+||++|-|++|-+||++.--..+...-...+... .+..+-+...++...++
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl 301 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL 301 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence 4567999999999988899999999999999999999998876532111111101111110 11122345678999999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHh
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
|..+|..+|.+|.|+.+++.+-+--
T Consensus 302 IR~LLkt~PteRlTI~~~m~hpwi~ 326 (400)
T KOG0604|consen 302 IRKLLKTEPTERLTIEEVMDHPWIN 326 (400)
T ss_pred HHHHhcCCchhheeHHHhhcCchhc
Confidence 9999999999999999999886543
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=300.11 Aligned_cols=240 Identities=18% Similarity=0.162 Sum_probs=188.2
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhc---cCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVG---KLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~---~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
||+|+||.||++.. .+++.||||.+....... ...+.+|..+++ ...||||+.+++++..++..++||||++|
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999995 568899999986543221 223445544443 34799999999999988999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--CccccC
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN 228 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~~~t 228 (508)
++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....++
T Consensus 82 ~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 99999886 3456999999999999999999999999 999999999999999999999999998654332 234688
Q ss_pred CCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 229 LAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 229 ~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
..|+|||.+.+ ..++.++|||||||++|+|++|..||........ ....... .......+...+.++.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMT-LTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999864 5578999999999999999999988653211000 0011110 111223344567789999999999
Q ss_pred cCCCCCC-----ChHHHHHHH
Q 010529 308 YEPRERP-----STKNLVVTL 323 (508)
Q Consensus 308 ~~p~~Rp-----s~~~il~~L 323 (508)
.||.+|| |+.++++|.
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhCc
Confidence 9999999 699998884
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=304.68 Aligned_cols=248 Identities=19% Similarity=0.181 Sum_probs=194.0
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-----ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-----DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
|.+++.||.|++|.||+|.. .+++.||||++...... ....+..|+++++.++|+||+++++++.+....++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 56778899999999999995 46889999999765433 1345778999999999999999999999988999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC--
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
||+ +++|.+++.... ..+++..+..++.||++||.|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 899999996422 37999999999999999999999999 9999999999999999999999999987654432
Q ss_pred --ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh-----hhhc--c----------chhhhhc
Q 010529 224 --SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-----MIRG--E----------NLNLLMD 283 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----~~~~--~----------~~~~~~~ 283 (508)
...+++.|+|||.+.+ ..++.++||||||+++|+|++|.+++...... .... . .......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2345678999998864 45788999999999999999997554322100 0000 0 0000000
Q ss_pred cccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHLEGK-----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... .....+..+.+++.+||..+|.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 112346788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=313.05 Aligned_cols=236 Identities=17% Similarity=0.197 Sum_probs=192.9
Q ss_pred ccCCCCcccEEEEEEE-cCCCEEEEEEec--C--CCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc--ceeeeecC
Q 010529 76 SESGEKAANVVYKGRL-ENRQWIAVKKFT--K--VAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE--RLLVAEYM 148 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~--~--~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~--~~lv~E~~ 148 (508)
..||+|+|-+||+|.. .+|..||--.++ . ......++|..|+.+|+.|+||||++++.+|.+... ..+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 5679999999999994 457777733222 1 122235789999999999999999999999987655 77999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeC-CCCCeEEcccCCccccCCC--Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSMDG--KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~~~~--~~ 224 (508)
..|+|..|++ +.+.++...+..|+.||++||.|||++. +|||||||.+||+|+ ..|.|||+|+|+|...... ..
T Consensus 126 TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 126 TSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred cCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 9999999997 4567888999999999999999999987 689999999999997 5589999999999876554 45
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH----HHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE----EATQVVG 300 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~ 300 (508)
..|||.|||||+.. ..|+...||||||++++||+|+.-|+.. .....++......+..|.. ..+++.+
T Consensus 204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-------C~n~AQIYKKV~SGiKP~sl~kV~dPevr~ 275 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-------CTNPAQIYKKVTSGIKPAALSKVKDPEVRE 275 (632)
T ss_pred eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-------hCCHHHHHHHHHcCCCHHHhhccCCHHHHH
Confidence 68999999999985 7899999999999999999999977533 2233333333333332322 2478999
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
||.+||.. ..+|||+.|+|.+
T Consensus 276 fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 276 FIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHHhcC-chhccCHHHHhhC
Confidence 99999998 9999999999987
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=299.69 Aligned_cols=242 Identities=19% Similarity=0.220 Sum_probs=193.3
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||.|+||+||+|.. .+++.||+|.+..... .....+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 58999999999984 4688999999864321 2234678899999999999999999999988999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---CccccCCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLA 230 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~t~~ 230 (508)
.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99997544457999999999999999999999999 999999999999999999999999988754432 23356788
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEP 310 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p 310 (508)
|+|||++.+..++.++||||||+++++|++|+.|+....... ....+...... .....+...++.+.+++.+||+.+|
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhcccc-ccccCCccCCHHHHHHHHHHccCCh
Confidence 999999988889999999999999999999998764321100 00000000000 1112333457789999999999999
Q ss_pred CCCC-----ChHHHHHH
Q 010529 311 RERP-----STKNLVVT 322 (508)
Q Consensus 311 ~~Rp-----s~~~il~~ 322 (508)
.+|| ++.+++.+
T Consensus 238 ~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 238 EKRLGCRGGSADEVREH 254 (277)
T ss_pred hHccCCCcccHHHHHhC
Confidence 9999 66667765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=296.78 Aligned_cols=240 Identities=18% Similarity=0.209 Sum_probs=189.7
Q ss_pred ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHh-ccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGV-GKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+.||.|+||.||+|.. .+++.||||.+....... ...+..|..++ ...+|+||+++++++...+..++||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999995 468899999986543211 22344555444 455899999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccccCCC
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA 230 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~ 230 (508)
++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++..
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999863 456899999999999999999999999 99999999999999999999999999887665566678899
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHHHHHHHHHHHHHhccc
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEATQVVGLASQCLQY 308 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~ 308 (508)
|++||.+.+..++.++||||||+++|+|+||..|+........ ...+.... .........+..+.+++.+||..
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 234 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV----FDNILSRRINWPEEVKEFCSPEAVDLINRLLCM 234 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhcccCCCCcccccCCHHHHHHHHHHccC
Confidence 9999999888889999999999999999999987643211110 00111100 11112224567899999999999
Q ss_pred CCCCCCChH---HHHHH
Q 010529 309 EPRERPSTK---NLVVT 322 (508)
Q Consensus 309 ~p~~Rps~~---~il~~ 322 (508)
+|++||++. +++.+
T Consensus 235 ~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 235 DPAKRLGANGYQEIKSH 251 (260)
T ss_pred CHHHccCCCcHHHHHcC
Confidence 999999665 55544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=300.04 Aligned_cols=250 Identities=22% Similarity=0.233 Sum_probs=192.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
..|.+++.||.|+||.||+|.. .++..||+|.+....... ...+.+|+.+++.++|+||+++++++..+...++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 4578889999999999999995 568889999986543322 34678999999999999999999999998899999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred cc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 96 677777643 2346788889999999999999999999 999999999999999999999999998753322 2
Q ss_pred ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhh--hhhc----------c------chhhhhcc
Q 010529 224 SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALD--MIRG----------E------NLNLLMDS 284 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~~----------~------~~~~~~~~ 284 (508)
...+++.|+|||++.+. .++.++||||||+++|+|+||..|+...... .... . ........
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 33468899999998753 5788999999999999999999876432110 0000 0 00000000
Q ss_pred ccCCCCC---------HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 HLEGKFS---------SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 ~~~~~~~---------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......+ ...+..+.+++.+|+..||.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000 0124578899999999999999999999865
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=304.68 Aligned_cols=247 Identities=18% Similarity=0.228 Sum_probs=190.4
Q ss_pred cCCCC--cccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEK--AANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+| +||+||++.. .+++.||||++...... ..+.+.+|+.+++.++||||++++++|..++..++||||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 34555 9999999995 57899999998754322 2357889999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---------
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--------- 222 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--------- 222 (508)
+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+.+......
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 9999987544556899999999999999999999999 999999999999999999999999854322111
Q ss_pred --CccccCCCCCCccccccC--CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----hccch---------------
Q 010529 223 --KSYSTNLAYTPPEYLKNG--RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----RGENL--------------- 278 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----~~~~~--------------- 278 (508)
....++..|+|||++.+. .++.++||||||+++|+|++|+.|+........ .....
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM 243 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence 111245679999999763 478899999999999999999987653211100 00000
Q ss_pred ----------------h-----hhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 279 ----------------N-----LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 279 ----------------~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
. .+....+........+..+.+|+.+||..||++|||+.+++++-+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0 000001111122345778999999999999999999999998844
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=292.56 Aligned_cols=245 Identities=20% Similarity=0.269 Sum_probs=202.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
+|.+.+.||.|++|.||++... ++..|++|++..........+.+|+++++.++|+||+++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3567788999999999999965 688899999976654456789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Cccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYS 226 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~ 226 (508)
+++|.+++.. ....+++..+..++.|++.||.|||..+ ++|+||+|+||+++.++.++|+|||.+...... ....
T Consensus 81 ~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 81 GGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 9999999864 2257899999999999999999999999 999999999999999999999999998766554 3456
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC--HHHHHHHHHHHHH
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS--SEEATQVVGLASQ 304 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~ 304 (508)
++..|++||.+.+..++.++||||||+++++|++|+.|+...... ........ ......+ ...+..+.+++.+
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM----KALFKIAT-NGPPGLRNPEKWSDEFKDFLKK 233 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH----HHHHHHHh-cCCCCcCcccccCHHHHHHHHH
Confidence 788999999998888899999999999999999999775432100 00000000 1111111 1226779999999
Q ss_pred hcccCCCCCCChHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~ 322 (508)
||..||.+|||+.+++++
T Consensus 234 ~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HccCChhhCCCHHHHhcC
Confidence 999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=301.89 Aligned_cols=244 Identities=20% Similarity=0.219 Sum_probs=195.3
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|..+.+||.|+||.||+|.. .++..|++|++....... ...+.+|+.+++.++||||+++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 34567789999999999995 468889999986543322 24688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 227 (508)
+. ++|.+++.. ....+++.++..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+
T Consensus 103 ~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 96 577777753 3456899999999999999999999999 99999999999999999999999999876665566678
Q ss_pred CCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 228 t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
+..|+|||++. ...++.++||||||+++|+|++|..|+....... ..................+..+.+|+.+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~ 255 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNDSPTLQSNEWTDSFRGFVDY 255 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence 89999999984 3567889999999999999999998764321100 0001111111111122345668999999
Q ss_pred hcccCCCCCCChHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~ 322 (508)
||+.+|.+||++.+++.+
T Consensus 256 ~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 256 CLQKIPQERPASAELLRH 273 (313)
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999976
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=299.66 Aligned_cols=249 Identities=21% Similarity=0.278 Sum_probs=194.1
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|++++.||.|++|.||+|.. .+|..||||++...... ....+.+|+++++.++||||+++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 46778899999999999995 46899999998754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
. ++|.+++.......+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 5 68999886544346899999999999999999999999 999999999999999999999999998754322 22
Q ss_pred cccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhh--hhh---c--cchh----------hh---hc
Q 010529 225 YSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALD--MIR---G--ENLN----------LL---MD 283 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~---~--~~~~----------~~---~~ 283 (508)
..++..|+|||++.+. .++.++||||||+++|+|++|+.|+...... ... . .... .. ..
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 3457889999988654 5688999999999999999999776432110 000 0 0000 00 00
Q ss_pred cccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHLE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.... .......+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 00112234678899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=301.91 Aligned_cols=249 Identities=19% Similarity=0.201 Sum_probs=199.3
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|..++.||.|+||.||+|+. .++..|++|.+...... ...++.+|+++++.++|+||+++++++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 55678889999999999995 46888999998643222 234688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 227 (508)
+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........+
T Consensus 97 ~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (308)
T cd06634 97 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG 173 (308)
T ss_pred cC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence 96 578777643 3456899999999999999999999999 99999999999999999999999999887766666778
Q ss_pred CCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 228 t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
+..|+|||.+. .+.++.++||||||+++|+|++|..|+...... ...................+..+.+|+.+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 249 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPALQSGHWSEYFRNFVDS 249 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH----HHHHHHhhcCCCCcCcccccHHHHHHHHH
Confidence 89999999974 346788999999999999999999775432110 00011111111111123456778999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhh
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
||..+|.+||++.+++.+.+...
T Consensus 250 cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 250 CLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HhhCCcccCCCHHHHhhCccccc
Confidence 99999999999999998865544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=300.25 Aligned_cols=240 Identities=18% Similarity=0.247 Sum_probs=194.9
Q ss_pred ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHH
Q 010529 76 SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLA 154 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~ 154 (508)
..||.|+||.||++.. .++..||||++..........+.+|+.+++.++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5679999999999995 568899999986544444567999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccCCC
Q 010529 155 KHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNLA 230 (508)
Q Consensus 155 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~~ 230 (508)
+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9874 446899999999999999999999999 999999999999999999999999987644322 23457889
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEP 310 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p 310 (508)
|++||.+.+..++.++||||||+++|+|++|..|+........ ............. .....+..+.+++.+||..+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhhCCcccC--CcccCCHHHHHHHHHHHhCCc
Confidence 9999999888889999999999999999999987643211000 0000011111110 112345678899999999999
Q ss_pred CCCCChHHHHHH
Q 010529 311 RERPSTKNLVVT 322 (508)
Q Consensus 311 ~~Rps~~~il~~ 322 (508)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=293.43 Aligned_cols=246 Identities=20% Similarity=0.214 Sum_probs=203.2
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+|.+.+.||.|+||.||++... ++..|++|++..... .....+.+|+++++.++|||++++++.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 3677888999999999999954 688899999976543 3456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC--
Q 010529 148 MPNDTLAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 99999999986532 467999999999999999999999999 9999999999999999999999999987654432
Q ss_pred --ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 224 --SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
...+++.|+|||.+.+..++.++||||||+++++|++|..|+....... ....... ......+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE----LALKILK-GQYPPIPSQYSSELRNL 234 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH----HHHHHhc-CCCCCCCCCCCHHHHHH
Confidence 3457888999999988889999999999999999999997754321110 0111111 11222344556789999
Q ss_pred HHHhcccCCCCCCChHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+||..+|++|||+.+++++
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=293.48 Aligned_cols=245 Identities=16% Similarity=0.213 Sum_probs=202.4
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+.+.||.|+||.||++.. .++..+++|.+..... .....+.+|+++++.++|+||+++++++......++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 67788999999999999984 4688899999875432 22457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--Cc
Q 010529 149 PNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~ 224 (508)
++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999999988642 2356899999999999999999999999 999999999999999999999999998765443 23
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..++..|++||.+.+..++.++|+||||+++|+|++|+.|+...... .....+........+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYKVQRGKYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCCCCCchhhCHHHHHHHHH
Confidence 45788999999998888999999999999999999999876432111 1111112222233445677889999999
Q ss_pred hcccCCCCCCChHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~ 322 (508)
||..+|++|||+.+++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=293.78 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=197.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC-----CCChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA-----WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
.|.+.+.||.|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++|+||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 467788899999999999995 568899999875321 11234788999999999999999999998664 4578
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 99999999999999863 345889999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 -------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
....++..|+|||++.+..++.++||||||+++|+|++|+.|+.... .................+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE----AMAAIFKIATQPTKPMLPDGVS 235 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC----HHHHHHHHHcCCCCCCCCcccC
Confidence 23457889999999988888999999999999999999997764321 0111122222222334566677
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+.+++.+||. +|..|||+.+++.|
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 889999999999 57999999998865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=292.29 Aligned_cols=243 Identities=21% Similarity=0.286 Sum_probs=201.3
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+...||.|++|.||++... +++.|++|.+..... .....+.+|++++++++||||+++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 567788999999999999954 578899999976653 23467999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----c
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----S 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 224 (508)
++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999863 367999999999999999999999999 9999999999999999999999999988665443 2
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..++..|+|||...+..++.++||||||+++|+|++|..|+...... ....... .......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRIV-QDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHh-ccCCCCCCCCCCHHHHHHHHH
Confidence 45788999999998777889999999999999999999775432100 0000111 111223344556789999999
Q ss_pred hcccCCCCCCChHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~ 322 (508)
||..+|++|||+.+++.+
T Consensus 234 ~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHhCChhhCcCHHHHhcC
Confidence 999999999999999854
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=296.40 Aligned_cols=247 Identities=19% Similarity=0.233 Sum_probs=190.4
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccC-CCCCCcceeeeeeeC--Ccceeeee
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAG--DERLLVAE 146 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~--~~~~lv~E 146 (508)
|.+++.||.|+||.||+|.. .+++.||+|+++.... .......+|+.++.++ .|+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 46788899999999999994 5688999999875422 2223456788899988 599999999999887 88999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---C
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---K 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~ 223 (508)
|+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. +.+||+|||++...... .
T Consensus 81 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 997 578887754 2357899999999999999999999999 999999999999999 99999999998765433 2
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-h------hccchhh---hhccc--cCCC-
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-I------RGENLNL---LMDSH--LEGK- 289 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~------~~~~~~~---~~~~~--~~~~- 289 (508)
...++..|+|||++.+ +.++.++|||||||++|||++|..|+....... . .+..... ..... ....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3457889999997654 556889999999999999999987765321100 0 0000000 00000 0000
Q ss_pred ----------CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 ----------FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 ----------~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.....+..+.+++.+||..+|++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 012346889999999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=306.39 Aligned_cols=248 Identities=17% Similarity=0.192 Sum_probs=194.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeC------Cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~ 140 (508)
..|++++.||+|+||.||+|.. .+++.||||.+.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 5678889999999999999994 568899999986432 22245678899999999999999999988643 34
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.|+||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 96 ~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 96 VYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred EEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 699999996 588887742 2889999999999999999999999 9999999999999999999999999997654
Q ss_pred CC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhh-h-------hc--------------
Q 010529 221 DG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-I-------RG-------------- 275 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~-------~~-------------- 275 (508)
.. ....++..|+|||.+.+..++.++||||||+++|+|++|+.|+....... + ..
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 43 23457889999999998899999999999999999999998765321000 0 00
Q ss_pred -----------cchhhhhccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 276 -----------ENLNLLMDSHLE----GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 276 -----------~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
..+..+...... ...+...+..+.+++.+||..||.+|||+.+++.+-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 000000000000 000123466789999999999999999999999884
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=298.54 Aligned_cols=250 Identities=11% Similarity=0.054 Sum_probs=182.0
Q ss_pred CcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCCCh-----------hHHHHHHHHhccCCCCCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWPDP-----------TQFKEEAEGVGKLRRKRLANLIGY 134 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~~~~~ 134 (508)
..|.+.+.||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 468899999999999999999644 34566665432221110 112334455667799999999998
Q ss_pred eeeCC----cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEE
Q 010529 135 CCAGD----ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210 (508)
Q Consensus 135 ~~~~~----~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl 210 (508)
+.... ..++++|++. .++.+.+.. ....++..+..|+.|++.||.|||+.+ ++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEE
Confidence 76543 3468888874 567766642 234678889999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCC-----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhh-hhhccch
Q 010529 211 SCFGLMKNSMDG-----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-MIRGENL 278 (508)
Q Consensus 211 ~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~ 278 (508)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 999998754321 2246899999999999889999999999999999999999876533110 0000000
Q ss_pred hhhhccccCCC-CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 279 NLLMDSHLEGK-FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 279 ~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...+.....+. .....++.+.+++..||..+|++||++.++++.|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 248 CDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 01111111111 1223467799999999999999999999999875
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=298.93 Aligned_cols=251 Identities=22% Similarity=0.251 Sum_probs=193.8
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
++|++++.||.|++|.||+|... +++.||+|.+...... ....+.+|+++++.++||||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 56788999999999999999954 6889999998654322 23568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCccccCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~~~~~--- 222 (508)
|+. ++|.+++.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 57888876544445688889999999999999999999 999999999999985 567999999998754322
Q ss_pred -CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhh-----hhh--ccchhhhhc----------
Q 010529 223 -KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALD-----MIR--GENLNLLMD---------- 283 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----~~~--~~~~~~~~~---------- 283 (508)
....+++.|+|||++.+. .++.++||||||+++|+|+||..|+...... .+. .......+.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 233567899999998664 5788999999999999999998776432110 000 000000000
Q ss_pred --cccCCC----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 --SHLEGK----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 --~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... .....+..+.+++.+||..+|++||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 012235678999999999999999999999986
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=291.12 Aligned_cols=245 Identities=19% Similarity=0.239 Sum_probs=201.8
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccceeeee
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLLVAE 146 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~lv~E 146 (508)
|.+.+.||+|++|.||+|... ++..|++|++..... ...+.+.+|+.++++++||||+++++.+... ...++|||
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 456678899999999999965 688999999875543 2356799999999999999999999999888 78999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 9999999999864 338999999999999999999999999 9999999999999999999999999987655442
Q ss_pred ---ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 224 ---SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 224 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
...++..|++||.+.+...+.++||||||+++++|++|..|+....... .....+.........+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM---AALYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHHHhccccCCCcCCCcccCHHHHH
Confidence 3457889999999988889999999999999999999998764321000 0011111111222334455788999
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
++.+||..+|.+||++.+++.+
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhC
Confidence 9999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=294.49 Aligned_cols=240 Identities=19% Similarity=0.171 Sum_probs=188.3
Q ss_pred CCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHH---HhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 78 SGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAE---GVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 78 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
||.|+||.||++.. .+++.||+|.+....... ...+..|.. .++...||||+.+++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 69999999999994 568899999986543221 122444443 44456899999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--CccccC
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--KSYSTN 228 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~~~t 228 (508)
++|.+++. ....+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|+
T Consensus 82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 99999886 3457999999999999999999999999 999999999999999999999999998754332 345688
Q ss_pred CCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcc
Q 010529 229 LAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307 (508)
Q Consensus 229 ~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 307 (508)
..|+|||++.++ .++.++||||||+++|+|++|+.|+...... ......... .......+...+..+.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~--~~~~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc--chHHHHHHh-hccCCCCCCcCCHHHHHHHHHHhh
Confidence 999999998754 6889999999999999999999876542110 000011111 111222344457789999999999
Q ss_pred cCCCCCC-----ChHHHHHHH
Q 010529 308 YEPRERP-----STKNLVVTL 323 (508)
Q Consensus 308 ~~p~~Rp-----s~~~il~~L 323 (508)
.+|.+|| ++.+++++-
T Consensus 236 ~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 236 RDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred cCHHhccCCCCCCHHHHHhCc
Confidence 9999999 999998763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=326.56 Aligned_cols=255 Identities=20% Similarity=0.203 Sum_probs=212.4
Q ss_pred HHHHHhcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecC---CCCCChhHHHHHHHHhccCCCCCCcceeeeee
Q 010529 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTK---VAWPDPTQFKEEAEGVGKLRRKRLANLIGYCC 136 (508)
Q Consensus 61 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~ 136 (508)
.+.....+-++|.+++.||+|+||.|..++. .+++++|+|++++ ....+...|..|-.+|..-+.+-|+.++..|.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 4455556678899999999999999999995 5589999999976 33445678999999999999999999999999
Q ss_pred eCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 137 AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 137 ~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
++.++||||||++||+|-.++... ..+++..+.-++..|+-||.-||+.| +|||||||+|||+|..|++||+|||.+
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhH
Confidence 999999999999999999999642 27999999999999999999999999 999999999999999999999999987
Q ss_pred cccC-CC----CccccCCCCCCccccc----c-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc
Q 010529 217 KNSM-DG----KSYSTNLAYTPPEYLK----N-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL 286 (508)
Q Consensus 217 ~~~~-~~----~~~~~t~~y~aPE~~~----~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (508)
-... ++ ...+|||-|++||++. + +.|++.+|.||+||++|||+.|..||+.+..- +....++...-
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv----eTY~KIm~hk~ 298 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV----ETYGKIMNHKE 298 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH----HHHHHHhchhh
Confidence 6555 33 3457999999999996 3 67899999999999999999999998866322 22223333211
Q ss_pred CCCCC--HHHHHHHHHHHHHhcccCCCCCCC---hHHHHHHH
Q 010529 287 EGKFS--SEEATQVVGLASQCLQYEPRERPS---TKNLVVTL 323 (508)
Q Consensus 287 ~~~~~--~~~~~~l~~l~~~cl~~~p~~Rps---~~~il~~L 323 (508)
.-.+| ..++++..+||.+.+. +|+.|.. +.++..|.
T Consensus 299 ~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 299 SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 22233 4578899999998876 8888877 99999883
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=298.23 Aligned_cols=258 Identities=19% Similarity=0.219 Sum_probs=197.4
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccc
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAG--DER 141 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~ 141 (508)
+..+.|++++.||.|+||.||+|.. .+|..||+|++....... ...+.+|+.++++++|+||+++++++... +..
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 3556788999999999999999995 468999999986543222 23567899999999999999999998754 468
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 84 FLVMEYCE-QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEEecCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 99999996 578888754 2357899999999999999999999999 99999999999999999999999999876543
Q ss_pred C----CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhhhc------
Q 010529 222 G----KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLLMD------ 283 (508)
Q Consensus 222 ~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~~~------ 283 (508)
. ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+......... +......+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 2 12234678999999865 45788999999999999999999776532110000 000000000
Q ss_pred ---cc-cC-CCC------CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 284 ---SH-LE-GKF------SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 284 ---~~-~~-~~~------~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.. .. ... ....++.+.+++.+||..||.+|||+.+++.|-+-..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 00 00 000 0113677889999999999999999999998865543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=296.37 Aligned_cols=248 Identities=24% Similarity=0.269 Sum_probs=193.7
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccceeeee
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLLVAE 146 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~lv~E 146 (508)
|.+++.||.|++|.||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 467888999999999999965 58889999998653 22345688999999999999999999999887 78999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
|++ ++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMD-HDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred ccc-ccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 997 589888854 2357999999999999999999999999 9999999999999999999999999987655432
Q ss_pred --ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-----------cchhhhh----c--
Q 010529 224 --SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-----------ENLNLLM----D-- 283 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-----------~~~~~~~----~-- 283 (508)
...++..|+|||.+.+ ..++.++||||||+++|+|+||+.|+.......... ....... .
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 2345778999998765 457889999999999999999997764322110000 0000000 0
Q ss_pred --------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 --------SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 --------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+...+...++..+.+++.+||..+|.+||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000011126778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=300.29 Aligned_cols=249 Identities=17% Similarity=0.230 Sum_probs=191.5
Q ss_pred ccccccCCCCcccEEEEEEEc---CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeC--Cccee
Q 010529 72 DNIVSESGEKAANVVYKGRLE---NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLL 143 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~l 143 (508)
|.+++.||+|+||.||+|... ++..||||.+.... ....+.+.+|+.+++.++||||+++++++... ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 677889999999999999954 47889999997633 22345788999999999999999999999887 78999
Q ss_pred eeecCCCCCHHHHhhcc---CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC----CCCeEEcccCCc
Q 010529 144 VAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE----DGDPRLSCFGLM 216 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~----~~~~kl~Dfg~a 216 (508)
||||+. ++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999997 4677766422 2236899999999999999999999999 999999999999998 899999999998
Q ss_pred cccCCC-------CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhh-----hhcc-------
Q 010529 217 KNSMDG-------KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-----IRGE------- 276 (508)
Q Consensus 217 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~~~------- 276 (508)
...... ....++..|+|||++.+. .++.++||||||+++++|++|+.|+....... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 754332 233567889999988764 57889999999999999999997764321111 0000
Q ss_pred -----------------chhhhhccccCCCCC-----H------HHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 277 -----------------NLNLLMDSHLEGKFS-----S------EEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 277 -----------------~~~~~~~~~~~~~~~-----~------~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......+.......+ . ..+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000000000111 0 234578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=297.69 Aligned_cols=250 Identities=18% Similarity=0.215 Sum_probs=191.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc-----c
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE-----R 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~-----~ 141 (508)
.|.+.+.||.|+||.||+|.. .+++.||||.+...... ....+.+|+.+++.+ +||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 467788899999999999995 46889999988654322 235788999999999 56999999999877655 7
Q ss_pred eeeeecCCCCCHHHHhhccC---CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCcc
Q 010529 142 LLVAEYMPNDTLAKHLFHWE---KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMK 217 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~ 217 (508)
|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||+|+||+++. ++.+||+|||++.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccce
Confidence 999999985 7888875432 346899999999999999999999999 999999999999998 8899999999987
Q ss_pred ccCCC----CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh--h---hhc--cchhhhhc--
Q 010529 218 NSMDG----KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD--M---IRG--ENLNLLMD-- 283 (508)
Q Consensus 218 ~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~---~~~--~~~~~~~~-- 283 (508)
..... ....+++.|+|||++.+ ..++.++||||||+++|+|++|..|+...... . ... ......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 54322 22346788999998865 45788999999999999999999776542110 0 000 00000000
Q ss_pred ---------cccCC----CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 ---------SHLEG----KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ---------~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..... ......+..+.+++.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 0012346778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=298.24 Aligned_cols=253 Identities=20% Similarity=0.244 Sum_probs=190.5
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCC----
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD---- 139 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~---- 139 (508)
...+.|.+++.||.|+||.||+|.. .+++.||||.+...... ....+.+|+.++++++||||++++++|...+
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 3445688899999999999999995 46889999998643322 2335678999999999999999999987654
Q ss_pred ----cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 140 ----ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 140 ----~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
..++||||+. ++|.+++.. ....+++.++..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCC
Confidence 3499999996 578887753 3346899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC--------ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-------hccchh
Q 010529 216 MKNSMDGK--------SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-------RGENLN 279 (508)
Q Consensus 216 a~~~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-------~~~~~~ 279 (508)
+....... ...++..|+|||.+.+. .++.++||||||+++|+|+||..|+........ .+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 87543321 23457789999988654 468899999999999999999876543211000 000000
Q ss_pred hh---------hccc-cCCCC---------CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 280 LL---------MDSH-LEGKF---------SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 280 ~~---------~~~~-~~~~~---------~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+ .+.. ..... ....+..+.+|+.+||..||.+|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00 0000 00000 00123567799999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=302.51 Aligned_cols=252 Identities=19% Similarity=0.284 Sum_probs=195.8
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~~ 142 (508)
.|.+++.||.|+||.||+|. ..++..||||.+.... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 56788899999999999999 4568899999986532 22345678899999999999999999988654 3479
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999995 78988886 3457999999999999999999999999 999999999999999999999999998765433
Q ss_pred ----CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh--------hh-----------hccch
Q 010529 223 ----KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD--------MI-----------RGENL 278 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--------~~-----------~~~~~ 278 (508)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+...... .. .....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23457889999998764 46888999999999999999999876432100 00 00000
Q ss_pred hhhhcccc---CC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHh
Q 010529 279 NLLMDSHL---EG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT--LARL 326 (508)
Q Consensus 279 ~~~~~~~~---~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~ 326 (508)
...+.... .. ......+..+.+++.+||..+|++|||+.+++++ +..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000000 00 0112346778999999999999999999999999 5443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=340.58 Aligned_cols=245 Identities=24% Similarity=0.417 Sum_probs=196.8
Q ss_pred ccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 74 IVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
....||+|+||.||+|+. .++..||||++..... ....|++++++++|||||+++|+|.+....++||||+++|+
T Consensus 694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred cccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 345679999999999995 5788999999864432 22356889999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHH---hCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccccCC
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN---TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNL 229 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~ 229 (508)
|.++++ .++|..+..|+.||++||.||| +.+ |+||||||+||+++.++.+++. ||............+|+
T Consensus 770 L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~ 842 (968)
T PLN00113 770 LSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISS 842 (968)
T ss_pred HHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccccc
Confidence 999994 3899999999999999999999 456 9999999999999998888775 66655444444557889
Q ss_pred CCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh------hh----hhccchhhhhccccCC--CCCHHHHHH
Q 010529 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL------DM----IRGENLNLLMDSHLEG--KFSSEEATQ 297 (508)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~------~~----~~~~~~~~~~~~~~~~--~~~~~~~~~ 297 (508)
.|+|||++.+..++.++|||||||++|||+||+.|+..... .+ .........+++.+.. ........+
T Consensus 843 ~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (968)
T PLN00113 843 AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVE 922 (968)
T ss_pred cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHH
Confidence 99999999988999999999999999999999988643210 00 0011122223333322 233456677
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 923 VMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 88999999999999999999999999988653
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=303.85 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=192.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~~ 142 (508)
++|.+++.||.|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++... ...+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 4578889999999999999994 5688999999864322 2345688999999999999999999987644 3479
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+|+||+. ++|.+++ ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 85 IVQELME-TDLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEehhcc-cCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 9999996 5888877 3457999999999999999999999999 999999999999999999999999998754332
Q ss_pred -------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh--------hh---ccchhhhhc
Q 010529 223 -------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM--------IR---GENLNLLMD 283 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--------~~---~~~~~~~~~ 283 (508)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+....... .. .+....+..
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 12457888999998754 467889999999999999999997765321000 00 000000000
Q ss_pred cc--------c-CCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SH--------L-EGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~--------~-~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.. . .... ....+.++.+++.+||+.+|.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0 0000 11235678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=292.22 Aligned_cols=255 Identities=21% Similarity=0.267 Sum_probs=198.5
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC--CCCCCcceeeeeeeCC----ccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL--RRKRLANLIGYCCAGD----ERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~~~~~~~~~~----~~~l 143 (508)
...++++.+|+|.||.||+|.+.+ +.||||++... +...|..|-+|.+.. .|+||++++++-..+. .++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 345667888999999999999865 67999999644 356788888888765 8999999999865544 7899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC--------CceeecCCCcceeeCCCCCeEEcccCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG--------RPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--------~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
|+||.+.|||.++| ....++|....+|+..+++||+|||+-. +|+|||||+.||||..|++..|+|||+
T Consensus 286 Vt~fh~kGsL~dyL---~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYL---KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHH---HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999 5678999999999999999999999742 499999999999999999999999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCC------cCccccchhhHHHHHHHHhCCCCC-------Cc-----hhhh
Q 010529 216 MKNSMDGK------SYSTNLAYTPPEYLKNGR------VIPESVIYSFGTVLLDLLSGKHIP-------PS-----HALD 271 (508)
Q Consensus 216 a~~~~~~~------~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~vl~elltg~~~~-------~~-----~~~~ 271 (508)
|..+..+. ..+||.+|||||++.+.. .-.+.||||+|.|||||++.-... +. .+-.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 98776542 357999999999997532 123689999999999999864221 10 0000
Q ss_pred hhhccchhh-hhccccCCCCCH-----HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 272 MIRGENLNL-LMDSHLEGKFSS-----EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~~-----~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
....+.++. ++....++.++. ....-+.+.+..||..||+-|.|+.=+-+.+..+....+
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 001111222 223333333332 235678999999999999999999999999888876543
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=295.76 Aligned_cols=250 Identities=18% Similarity=0.266 Sum_probs=194.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+|++++.||.|++|.||+|+. .++..||||+++..... ....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 367889999999999999996 46889999999765432 2456789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 149 PNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++...... .
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence 74 8888875422 246899999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-----------chhhhhc-cccCC--
Q 010529 224 SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-----------NLNLLMD-SHLEG-- 288 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~-- 288 (508)
...++..|++||++.+. .++.++||||||+++|+|++|+.|+........... ....+.. +....
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF 238 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence 34567889999998654 468899999999999999999977643211100000 0000000 00000
Q ss_pred ---------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 289 ---------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 289 ---------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......+..+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0112335678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=297.47 Aligned_cols=252 Identities=20% Similarity=0.241 Sum_probs=203.7
Q ss_pred HHHHHHh-cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeee
Q 010529 60 LDLRAAT-NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGY 134 (508)
Q Consensus 60 ~~~~~~~-~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~ 134 (508)
.|....| +.|..|+ .||+|+||.||-++. .+|+-+|.|++.+... ....-.+.|-.+|.+++.+.||.+-..
T Consensus 177 lE~qpvt~n~F~~~R---vlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA 253 (591)
T KOG0986|consen 177 LELQPVTKNTFRVYR---VLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA 253 (591)
T ss_pred HHhhhccccceeeeE---EEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence 3343333 3355554 459999999999994 5699999998854322 123457789999999999999999999
Q ss_pred eeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 135 ~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
|...+.+|||+..|+||+|.-+|.+.....+++..++-++.+|+.||++||+.+ ||+||+||+|||+|+.|++.|+|+|
T Consensus 254 feTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 254 FETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred ecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccc
Confidence 999999999999999999999998766678999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCCc---cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 215 LMKNSMDGKS---YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 215 ~a~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
+|..+..+.. .+||.+|||||++.++.|+...|.|||||+||||+.|+.||...-.. ...+.+...+... ...++
T Consensus 333 LAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-vk~eEvdrr~~~~-~~ey~ 410 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-VKREEVDRRTLED-PEEYS 410 (591)
T ss_pred eEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-hhHHHHHHHHhcc-hhhcc
Confidence 9998877643 47899999999999999999999999999999999999987543211 1111111111111 12345
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTK 317 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~ 317 (508)
...+++..+|....|.+||.+|.-..
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccCC
Confidence 67788999999999999999996443
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=304.90 Aligned_cols=243 Identities=21% Similarity=0.213 Sum_probs=202.2
Q ss_pred CCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.+..|.+...+|.|+|+.|-.+. ..+++..+||++.... .+-.+|+.++... +||||+++.+++.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 46778888899999999999999 5668889999997663 2345677666666 8999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee-CCCCCeEEcccCCccccCCC-C
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF-DEDGDPRLSCFGLMKNSMDG-K 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill-~~~~~~kl~Dfg~a~~~~~~-~ 223 (508)
|.+.|+-|.+.+. ....+. ..+..|+.+|+.++.|||++| +||||+||+|||+ ++.++++|+|||.++..... .
T Consensus 396 e~l~g~ell~ri~--~~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIR--SKPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHH--hcchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 9999988877774 222333 777889999999999999999 9999999999999 69999999999999876665 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
+.+-|..|.|||++....|++.+|+||||++||+||+|+.|+...-.+ ..+......+.+....+....+|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence 335578899999999999999999999999999999999886433211 2333333444455677899999999
Q ss_pred HhcccCCCCCCChHHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+||+.||.+||++.++..+-+.
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhccCChhhCcChhhhccCcch
Confidence 9999999999999999988666
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=298.98 Aligned_cols=242 Identities=20% Similarity=0.223 Sum_probs=186.2
Q ss_pred cccEEEEEE-EcCCCEEEEEEecCC--CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhh
Q 010529 82 AANVVYKGR-LENRQWIAVKKFTKV--AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLF 158 (508)
Q Consensus 82 ~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~ 158 (508)
++|.||.++ ..+++.||||++... .......+.+|+.+++.++|+||+++++++...+..+++|||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 344455555 336889999998754 22334679999999999999999999999999999999999999999999997
Q ss_pred ccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----------Ccccc
Q 010529 159 HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----------KSYST 227 (508)
Q Consensus 159 ~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----------~~~~~ 227 (508)
......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 544567899999999999999999999999 999999999999999999999999987644321 22345
Q ss_pred CCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc----chhhhhc------------------
Q 010529 228 NLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE----NLNLLMD------------------ 283 (508)
Q Consensus 228 t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~------------------ 283 (508)
+..|+|||++.+ ..++.++||||||+++|+|++|..|+........... .....++
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 678999999865 3578899999999999999999987653211000000 0000000
Q ss_pred ------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 284 ------SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 284 ------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
...........+.++.+|+.+||..||++|||+.+++++-.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 00001112344678899999999999999999999998844
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=293.05 Aligned_cols=237 Identities=20% Similarity=0.264 Sum_probs=191.2
Q ss_pred CCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||.|+||.||+++.. +++.|++|.+..... .....+.+|++++++++||||+++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 489999999865433 2345789999999999999999999999989999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----------
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----------- 222 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----------- 222 (508)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999864 347899999999999999999999999 999999999999999999999999988754332
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH--HHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE--EATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 299 (508)
....++..|++||.+.+...+.++||||||+++|+|++|..|+........ ...+..... ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI----FQNILNGKI--EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCCc--CCCccccCCHHHH
Confidence 123467889999999888889999999999999999999987643221110 111111111 11222 267899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+++.+||+.+|.+|||+..+.+.|
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHh
Confidence 999999999999999994444433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=283.09 Aligned_cols=255 Identities=15% Similarity=0.196 Sum_probs=196.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cC----CCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee-CCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-EN----RQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA-GDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~ 140 (508)
...|++++.||+|.||.||+|.- ++ ...+|+|+++..... -.....+|+.+++.++||||+.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 34678999999999999999963 22 236899999765322 24568899999999999999999999887 788
Q ss_pred ceeeeecCCCCCHHHHhhcc---CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC----CCeEEccc
Q 010529 141 RLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED----GDPRLSCF 213 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~----~~~kl~Df 213 (508)
++|++||.+ -+|..+|+.. ....++...+.+|+.||+.|+.|||++- |+||||||.||||..+ |+|||+||
T Consensus 103 v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 103 VWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999997 6798888643 2356889999999999999999999999 9999999999999877 89999999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc----------
Q 010529 214 GLMKNSMDG-------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG---------- 275 (508)
Q Consensus 214 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---------- 275 (508)
|+++.+... ...+.|.+|+|||.+.| ..|+...|||+.||++.||+|-++.|...-...-..
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 999866543 44567999999999987 468999999999999999999987665431111000
Q ss_pred ----------cchhh---------hhccccCCCC-C---HH-------HHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 276 ----------ENLNL---------LMDSHLEGKF-S---SE-------EATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 276 ----------~~~~~---------~~~~~~~~~~-~---~~-------~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
..+.. .+........ + .. -++...+|+.++|..||-+|.|+.+++++.--
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF 340 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF 340 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence 00000 0000000000 0 00 13347889999999999999999999988533
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=302.39 Aligned_cols=253 Identities=16% Similarity=0.232 Sum_probs=195.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeee----CCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~ 142 (508)
..|.+.+.||.|+||.||+|.. .++..||+|++..... .....+.+|+.+++.++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 3567778899999999999994 5688999999875422 234568889999999999999999998753 34679
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 85 VVMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999995 68998885 3456999999999999999999999999 999999999999999999999999998654322
Q ss_pred --------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-------hhc-----------
Q 010529 223 --------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-------IRG----------- 275 (508)
Q Consensus 223 --------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-------~~~----------- 275 (508)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ..+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence 12357888999999865 457889999999999999999998875421100 000
Q ss_pred -cchhhhhcccc-CCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 276 -ENLNLLMDSHL-EGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 276 -~~~~~~~~~~~-~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
......+.... .... ....+..+.+++.+||+.+|.+|||+.+++.+.+--
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~ 298 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence 00011111000 0011 123467899999999999999999999999885443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=294.94 Aligned_cols=248 Identities=22% Similarity=0.286 Sum_probs=196.6
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+++.||.|++|.||+|.. .+++.+++|.+...... ....+.+|+.+++.++|+||+++++++..+...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 45678899999999999995 46889999998754432 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----c
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----S 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 224 (508)
+ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... .
T Consensus 81 ~-~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 D-TDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred C-CCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 7 488888754 3357899999999999999999999999 9999999999999999999999999987655432 3
Q ss_pred cccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-h------ccchhhhhcccc----------
Q 010529 225 YSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-R------GENLNLLMDSHL---------- 286 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-~------~~~~~~~~~~~~---------- 286 (508)
..++..|+|||.+.+. .++.++||||||+++|+|+||+.|+........ . +......+....
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4567889999998776 688999999999999999999977643211000 0 000000000000
Q ss_pred -------CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 287 -------EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 287 -------~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
........+.++.+++.+||..||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 001123456789999999999999999999999875
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=283.76 Aligned_cols=245 Identities=20% Similarity=0.257 Sum_probs=205.0
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhH---HHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
..++.+++.||+|.||.|-+++ ..+++.+|+|++++...-..++ -+.|-++|+..+||.+..+...|...+.+|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4556788999999999999999 5679999999998765544433 45688999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC---
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD--- 221 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~--- 221 (508)
|||..||.|.-+|. ....+++....-+...|+.||.|||+++ ||+||+|.+|+|+|.+|++||.|||+++....
T Consensus 247 MeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 247 MEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred EEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccc
Confidence 99999999988886 4667999999999999999999999999 99999999999999999999999999974332
Q ss_pred -CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 222 -GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 222 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
..+++|||.|+|||++....|....|.|.+|||+|||++|+.||..... ..-+..++-..+ .+|...+++...
T Consensus 324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh----~kLFeLIl~ed~--kFPr~ls~eAkt 397 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH----EKLFELILMEDL--KFPRTLSPEAKT 397 (516)
T ss_pred eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch----hHHHHHHHhhhc--cCCccCCHHHHH
Confidence 3578999999999999999999999999999999999999999764211 111112222211 356677888999
Q ss_pred HHHHhcccCCCCCC-----ChHHHHHH
Q 010529 301 LASQCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rp-----s~~~il~~ 322 (508)
|+..+|.+||.+|. .+.||.++
T Consensus 398 LLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 398 LLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 99999999999994 46677666
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=295.59 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=196.3
Q ss_pred cCCCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCccee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~l 143 (508)
..+++|.+.+.||.|+||.||+|...+ ++.||||.++..... ....+..|+.++.+. .||||++++++|......++
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 355678889999999999999999764 889999999754322 234577788777666 59999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
||||+. ++|.+++.. ....+++..+..++.||+.||.|||+ .+ ++||||+|+||+++.++.+||+|||++......
T Consensus 92 v~e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 999985 577776654 34578999999999999999999997 47 999999999999999999999999998765433
Q ss_pred C---ccccCCCCCCccccccCC----cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc-CCCCCHHH
Q 010529 223 K---SYSTNLAYTPPEYLKNGR----VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL-EGKFSSEE 294 (508)
Q Consensus 223 ~---~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 294 (508)
. ...++..|+|||.+.+.. ++.++||||||+++|+|++|+.|+...... . ......+.... ........
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-F--EVLTKILQEEPPSLPPNEGF 245 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-H--HHHHHHhcCCCCCCCCCCCC
Confidence 2 234677899999987543 788999999999999999999876431110 0 00111111110 00111134
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.++.+|+.+||..||.+|||+.+++.+.+-
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 6779999999999999999999999988553
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=292.05 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=192.6
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccC---CCCCCcceeeeeeeCCc-----
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKL---RRKRLANLIGYCCAGDE----- 140 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~nIv~~~~~~~~~~~----- 140 (508)
|++++.||.|+||.||+|+.. +++.||||++....... ...+.+|+.+++++ .||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 467788999999999999965 48899999997543222 33566788777666 69999999999987766
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.+++|||+. ++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 899999997 58998886544456999999999999999999999999 9999999999999999999999999987654
Q ss_pred CCC---ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchh------------------
Q 010529 221 DGK---SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN------------------ 279 (508)
Q Consensus 221 ~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~------------------ 279 (508)
... ...++..|+|||++.+..++.++||||||+++|+|++|..|+..............
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 332 23467889999999888899999999999999999999866543211100000000
Q ss_pred hhhccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 280 LLMDSHLE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 280 ~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
........ .......+..+.+++.+||..||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000000 01112346778899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=305.72 Aligned_cols=253 Identities=21% Similarity=0.268 Sum_probs=193.5
Q ss_pred cccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC------Ccceee
Q 010529 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DERLLV 144 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~~~lv 144 (508)
..-+.||.|+||.||+|+ ..+|+.||||.++.... ...+...+|+++|++|+|+|||+++++=.+. ....+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 334567999999999999 67799999999987542 3467899999999999999999999985443 346899
Q ss_pred eecCCCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee--CCCCC--eEEcccCCcccc
Q 010529 145 AEYMPNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF--DEDGD--PRLSCFGLMKNS 219 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill--~~~~~--~kl~Dfg~a~~~ 219 (508)
||||.||||...+...+ ...|++.+.+.++.+++.||.|||+++ |+||||||.||++ ..+|+ .||+|||.|+..
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 99999999999996543 357999999999999999999999999 9999999999998 33344 799999999988
Q ss_pred CCCC---ccccCCCCCCccccc-cCCcCccccchhhHHHHHHHHhCCCCCCchhhh-----hh----hccc--hhhhhcc
Q 010529 220 MDGK---SYSTNLAYTPPEYLK-NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-----MI----RGEN--LNLLMDS 284 (508)
Q Consensus 220 ~~~~---~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----~~----~~~~--~~~~~~~ 284 (508)
.++. +.+||..|.+||... .+.|+..+|.|||||++|+..||..||-...-. .. .... +.....+
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~ 254 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQE 254 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeec
Confidence 8774 568999999999998 488899999999999999999999987543111 00 0000 0000000
Q ss_pred ccCC--------CCC----HHHHHHHHHHHHHhcccCCCCCC--ChHHHHHHHHHh
Q 010529 285 HLEG--------KFS----SEEATQVVGLASQCLQYEPRERP--STKNLVVTLARL 326 (508)
Q Consensus 285 ~~~~--------~~~----~~~~~~l~~l~~~cl~~~p~~Rp--s~~~il~~L~~~ 326 (508)
...+ +++ ......+..++..+|..+|.+|- .+.+....+..|
T Consensus 255 ~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 255 EENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred ccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 0010 111 23345566677788888999997 666655555444
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=292.97 Aligned_cols=249 Identities=18% Similarity=0.288 Sum_probs=193.9
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+.+.||.|++|+||+|... +++.|+||++..... .......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 467788999999999999965 578899999865432 22334567999999998 999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---Ccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSY 225 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~ 225 (508)
+++|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 789999887544457899999999999999999999999 999999999999999999999999998765543 234
Q ss_pred ccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----------------hc----cchhhhhc
Q 010529 226 STNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----------------RG----ENLNLLMD 283 (508)
Q Consensus 226 ~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----------------~~----~~~~~~~~ 283 (508)
.++..|+|||++.+ ..++.++||||||+++++|++|+.|++....... .. ......+.
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 57888999998854 4578899999999999999999977643211000 00 00000000
Q ss_pred cccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..... ......+..+.+++.+||..+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000 0001124679999999999999999999999865
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=294.14 Aligned_cols=243 Identities=21% Similarity=0.242 Sum_probs=199.7
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+|.+.+.||.|+||.||+|.. .++..|++|++..... .....+.+|+.++++++ ||||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 578889999999999999995 4689999999865322 22356889999999998 999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC--
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
||+++++|.+++.. ...+++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999963 447999999999999999999999999 9999999999999999999999999987543321
Q ss_pred ----------------------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhh
Q 010529 224 ----------------------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281 (508)
Q Consensus 224 ----------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~ 281 (508)
...++..|++||++.+..++.++||||||++++++++|+.|+..... .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~ 234 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE----YLTFQKI 234 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHH
Confidence 22457889999999888889999999999999999999977543211 0001111
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCh----HHHHHH
Q 010529 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPST----KNLVVT 322 (508)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~----~~il~~ 322 (508)
.. .....+...++.+.+++.+||..+|.+|||+ .+++.+
T Consensus 235 ~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 LK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred Hh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11 1223344557789999999999999999999 888765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=301.50 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=199.1
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCC-----cce
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-----ERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-----~~~ 142 (508)
.|++.+.||.|++|.||+|... ++..||||++.... ....+.+.+|+.+++.++||||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 3677889999999999999954 58899999987543 233567999999999999999999999987765 789
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||.|||++.++.++|+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999997 58988886 3448999999999999999999999999 999999999999999999999999998765443
Q ss_pred C-------ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-------------------hc
Q 010529 223 K-------SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-------------------RG 275 (508)
Q Consensus 223 ~-------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-------------------~~ 275 (508)
. ...++..|+|||++.+. .++.++||||||+++|+|++|+.|+........ ..
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 2 34568889999999877 789999999999999999999987654321000 00
Q ss_pred cchhhhhccc-cC-----CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHhh
Q 010529 276 ENLNLLMDSH-LE-----GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT--LARLQ 327 (508)
Q Consensus 276 ~~~~~~~~~~-~~-----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~~ 327 (508)
......+... .. .......+..+.+++.+||..+|.+|||+.+++.+ +..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0000000000 00 00112246778999999999999999999999987 44443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=293.34 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=194.1
Q ss_pred ccccccCCCCcccEEEEEEE----cCCCEEEEEEecCCCC----CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 72 DNIVSESGEKAANVVYKGRL----ENRQWIAVKKFTKVAW----PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
|++.+.||.|+||.||+|.. .+|..||+|++..... ...+.+.+|+.++..+ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 57788999999999999985 3688899999865322 2245688999999999 6999999999998888899
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999863 456889999999999999999999999 999999999999999999999999998755432
Q ss_pred -----CccccCCCCCCccccccC--CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHH
Q 010529 223 -----KSYSTNLAYTPPEYLKNG--RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSE 293 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 293 (508)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+..... ......+.... .....+..
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 234 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSEPPYPQE 234 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc----cccHHHHHHHhhccCCCCCcc
Confidence 234578899999998753 467899999999999999999977642110 00011111111 01123344
Q ss_pred HHHHHHHHHHHhcccCCCCCC-----ChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rp-----s~~~il~~ 322 (508)
.+..+.+++.+||..+|.+|| ++.+++.+
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 567789999999999999997 66777665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=278.93 Aligned_cols=245 Identities=23% Similarity=0.221 Sum_probs=198.4
Q ss_pred ccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 76 SESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
+.||+|+|+.|--+. +.+|..+|||++.+.......++.+|++++.++ .|+||+.++++|.++..+|||||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 457999999999999 889999999999988766788999999999999 799999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC---CeEEcccCCccccCCC--------
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG---DPRLSCFGLMKNSMDG-------- 222 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~Dfg~a~~~~~~-------- 222 (508)
..+|. ....+++.++.++..+|+.||.|||.+| |.|||+||+|||-.+-. -+|||||.+.......
T Consensus 164 LshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spast 240 (463)
T KOG0607|consen 164 LSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAST 240 (463)
T ss_pred HHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCC
Confidence 99987 4667999999999999999999999999 99999999999986543 3899999876432211
Q ss_pred ---CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhh---hhhhccc----hhhhhccccC
Q 010529 223 ---KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL---DMIRGEN----LNLLMDSHLE 287 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~---~~~~~~~----~~~~~~~~~~ 287 (508)
.+.+|+..|||||+.. ...|+.++|.||||||||-||+|.+||.++-- .+-.++. -..++..+..
T Consensus 241 P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE 320 (463)
T KOG0607|consen 241 PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 320 (463)
T ss_pred ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc
Confidence 2446778899999864 24689999999999999999999988866421 1111111 0112222222
Q ss_pred C--CCC----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 288 G--KFS----SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 288 ~--~~~----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+ ++| ..++.+..+++..+|..++.+|.++..++.+-
T Consensus 321 GkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 321 GKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred cCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 1 223 34578889999999999999999999998763
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=288.66 Aligned_cols=245 Identities=16% Similarity=0.196 Sum_probs=194.6
Q ss_pred cccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCC-----CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAW-----PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.|.+.+.||.|+||.||++.... +..+++|.++.... ....++..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36778899999999999999543 44466666543221 1234577899999999999999999999988899999
Q ss_pred eecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 145 AEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
|||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++ +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 9999999999888532 3457999999999999999999999999 999999999999975 57999999998765433
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
....+++.|+|||.+.+..++.++||||||+++|+|++|..|+...... ....... .......+...+.++
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~ 233 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL----SVVLRIV-EGPTPSLPETYSRQL 233 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHH-cCCCCCCcchhcHHH
Confidence 2345788899999998888899999999999999999999876432110 0011111 111223345667889
Q ss_pred HHHHHHhcccCCCCCCChHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+++.+||..+|++||++.+++++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhhC
Confidence 999999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=293.94 Aligned_cols=249 Identities=19% Similarity=0.251 Sum_probs=196.2
Q ss_pred ccccccCCCCcccEEEEEEE----cCCCEEEEEEecCCCC----CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 72 DNIVSESGEKAANVVYKGRL----ENRQWIAVKKFTKVAW----PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
|.+.+.||.|++|.||+++. .++..||||.++.... .....+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 56788899999999999984 2467899999864321 2235688999999999 6999999999999888999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ...+++..+..++.|+++||.|||+.+ ++|+||+|.||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 99999999999998853 456899999999999999999999999 999999999999999999999999998754432
Q ss_pred C-----ccccCCCCCCccccccCC--cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 K-----SYSTNLAYTPPEYLKNGR--VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 ~-----~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
. ...++..|++||.+.+.. .+.++||||||+++|+|++|..|+................... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 2 235788999999987654 6889999999999999999998764221000000000111111 112334456
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
..+.+++.+||+.+|++|||+.++...|+.
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 778999999999999999998877766654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=306.56 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=205.7
Q ss_pred cCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeee-----CC
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCA-----GD 139 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~-----~~ 139 (508)
+.-..+.|+..||.|.+|.||+++ .++++.+|||+...... ..+++..|.++|+.+ .|||++.++|++.. ++
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 333445778888999999999999 67899999999876553 346788999999998 89999999999863 56
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
.++||||||.|||..++++...+..+.|..+..|++.++.||.|||.+. +||||||-.|||++.++.|||+|||++...
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 7999999999999999998878889999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc-cccCCC
Q 010529 220 MDG----KSYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGK 289 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 289 (508)
..+ .+..||+.|||||++.. ..|+.++|+||||++..||-.|.+|.... .....+..+.. +...-.
T Consensus 174 dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLk 249 (953)
T KOG0587|consen 174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLK 249 (953)
T ss_pred ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCcccc
Confidence 543 56789999999999863 45788999999999999999998664221 11111111111 111111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
-+...++++.++|..||.+|-.+||++.++++|
T Consensus 250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred chhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 245678999999999999999999999999887
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=299.59 Aligned_cols=262 Identities=16% Similarity=0.214 Sum_probs=196.7
Q ss_pred HHHHHHHh-cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeee
Q 010529 59 FLDLRAAT-NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGY 134 (508)
Q Consensus 59 ~~~~~~~~-~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~ 134 (508)
..|+.... .-...|.++..||.|+||.||+|.. .++..||||++...... ....+.+|+.+++.++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 34444443 2245677889999999999999995 56889999998653211 23468899999999999999999999
Q ss_pred eeeCC------cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCe
Q 010529 135 CCAGD------ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208 (508)
Q Consensus 135 ~~~~~------~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~ 208 (508)
+.... ..++|+||+. .+|..++ ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCE
Confidence 86543 4589999996 5777655 236899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh-hh----h-------
Q 010529 209 RLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-MI----R------- 274 (508)
Q Consensus 209 kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~----~------- 274 (508)
+|+|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .. .
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998765433 33467888999999876 45788999999999999999999887542100 00 0
Q ss_pred -------ccchhhhhc---cccCCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHh
Q 010529 275 -------GENLNLLMD---SHLEGKF---SSEEATQVVGLASQCLQYEPRERPSTKNLVVT--LARL 326 (508)
Q Consensus 275 -------~~~~~~~~~---~~~~~~~---~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~ 326 (508)
......... ....... ....+..+.+|+.+||+.||.+||++.+++.+ ++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 000000000 0000000 01234668899999999999999999999987 5444
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=299.98 Aligned_cols=248 Identities=20% Similarity=0.279 Sum_probs=191.4
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC--CCChhHHHHHHHHhccC-CCCCCcceeeeeeeC--Cccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAG--DERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~--~~~~l 143 (508)
.+|.+.+.||.|+||.||+|... ++..||||++.... ......+.+|+.+++++ +||||++++++|... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 35677888999999999999954 58889999885432 22345678899999999 999999999998653 35799
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+. ++|.+++.. ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 87 VFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred Eecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 999997 589998853 37889999999999999999999999 999999999999999999999999998754332
Q ss_pred --------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----h--------------
Q 010529 223 --------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----R-------------- 274 (508)
Q Consensus 223 --------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----~-------------- 274 (508)
....++..|+|||++.+ ..++.++||||||+++|+|+||+.|+........ .
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12457889999998765 4578899999999999999999987653210000 0
Q ss_pred ccchhhhhccccCC------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 275 GENLNLLMDSHLEG------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 275 ~~~~~~~~~~~~~~------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......++...... ......+.++.+++.+||+.+|.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000011100000 0111246778999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=300.40 Aligned_cols=248 Identities=16% Similarity=0.189 Sum_probs=191.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC----------
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG---------- 138 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~---------- 138 (508)
..|.+++.||.|+||.||+|.. .++..||+|++........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 4678889999999999999995 56889999999766555567799999999999999999999876543
Q ss_pred ----CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEccc
Q 010529 139 ----DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCF 213 (508)
Q Consensus 139 ----~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Df 213 (508)
...++||||+. ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++ .++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCc
Confidence 34789999996 58988884 456899999999999999999999999 99999999999997 4567899999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-----hhc-----
Q 010529 214 GLMKNSMDG-------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-----IRG----- 275 (508)
Q Consensus 214 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~~----- 275 (508)
|.+...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ...
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998754321 12346788999998754 557889999999999999999998874321000 000
Q ss_pred ----c----chhhhhc-cccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 276 ----E----NLNLLMD-SHLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 276 ----~----~~~~~~~-~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
. ....... ....... ....+.++.+|+.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 0000000 0000000 11235678899999999999999999999977
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=318.78 Aligned_cols=248 Identities=19% Similarity=0.208 Sum_probs=185.9
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeee-------
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCA------- 137 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------- 137 (508)
+.+++++.+..||+||||.||+++. =+|+.+|||+|..... .....+.+|++.|++|+|||||+++..|.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 3455667778889999999999994 4789999999976541 123468999999999999999998753100
Q ss_pred --------------------------------------------------------------------------------
Q 010529 138 -------------------------------------------------------------------------------- 137 (508)
Q Consensus 138 -------------------------------------------------------------------------------- 137 (508)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHH
Q 010529 138 ------------------------G--------DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN 185 (508)
Q Consensus 138 ------------------------~--------~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH 185 (508)
+ -.+||-||||+..+|.+++..+.-.. .....++++.+|++||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence 0 12478899999888888775422211 46788999999999999999
Q ss_pred hCCCceeecCCCcceeeCCCCCeEEcccCCccccC----------------------CCCccccCCCCCCccccccC---
Q 010529 186 TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM----------------------DGKSYSTNLAYTPPEYLKNG--- 240 (508)
Q Consensus 186 ~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~----------------------~~~~~~~t~~y~aPE~~~~~--- 240 (508)
+.| +|||||||.||+++.++.|||+|||+|.... ..+..+||..|+|||++.+.
T Consensus 715 ~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 715 DQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred hCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 999 9999999999999999999999999997621 11345789999999999764
Q ss_pred CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC--CCCCHHHHHHHHHHHHHhcccCCCCCCChHH
Q 010529 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE--GKFSSEEATQVVGLASQCLQYEPRERPSTKN 318 (508)
Q Consensus 241 ~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~ 318 (508)
.|+.|+|+|||||||+||+.- |...+.. ...+..+-+..+. ..+.....+.-..+|.++++.||.+|||+.|
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~yP---F~TsMER---a~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLYP---FGTSMER---ASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred cccchhhhHHHHHHHHHHhcc---CCchHHH---HHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 499999999999999999863 4332211 1111111111111 1123334455567999999999999999999
Q ss_pred HHHH
Q 010529 319 LVVT 322 (508)
Q Consensus 319 il~~ 322 (508)
+|..
T Consensus 868 LL~s 871 (1351)
T KOG1035|consen 868 LLNS 871 (1351)
T ss_pred Hhhc
Confidence 9864
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=293.73 Aligned_cols=247 Identities=20% Similarity=0.269 Sum_probs=192.4
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeee-CCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCA-GDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~lv~E 146 (508)
.|.+++.||.|+||.||+|. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.. ....++|||
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 46788899999999999999 45788999998864321 234578899999999999999999999865 457899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 225 (508)
|+ +++|..++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 98 578988884 456888889999999999999999999 999999999999999999999999998755433 334
Q ss_pred ccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-------hhcc------------chhhhhccc
Q 010529 226 STNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-------IRGE------------NLNLLMDSH 285 (508)
Q Consensus 226 ~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-------~~~~------------~~~~~~~~~ 285 (508)
.++..|+|||.+.+ ..++.++||||||+++|+|+||+.|+....... ..+. ....++...
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 57888999998765 568899999999999999999997765421100 0000 000000000
Q ss_pred -cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 286 -LEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 286 -~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.....+ ...+..+.+++.+||..+|++|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000111 1235779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=288.75 Aligned_cols=248 Identities=23% Similarity=0.278 Sum_probs=194.7
Q ss_pred ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|.+++.||+|++|.||+|... +++.||+|++.... ......+..|+.+++.++|+||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678899999999999954 58999999997653 223457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----c
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----S 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 224 (508)
. ++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~-~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred C-cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 7 5899999642 247999999999999999999999999 9999999999999999999999999987654432 2
Q ss_pred cccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------c----------cc---hhhhhc
Q 010529 225 YSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------G----------EN---LNLLMD 283 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~----------~~---~~~~~~ 283 (508)
..++..|+|||.+.+. .++.++||||||+++|||++|+.|+......... . .. ......
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 3456789999998766 7889999999999999999998776443210000 0 00 000000
Q ss_pred cccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..... ......+..+.+++.+||..+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000 0011235679999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=295.54 Aligned_cols=251 Identities=18% Similarity=0.164 Sum_probs=192.1
Q ss_pred cccc-cccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--------------hhHHHHHHHHhccCCCCCCcceeee
Q 010529 71 SDNI-VSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--------------PTQFKEEAEGVGKLRRKRLANLIGY 134 (508)
Q Consensus 71 ~~~~-~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~~~~~ 134 (508)
.|.. .+.||.|+||.||+|.. .+++.||||++....... ...+.+|+++++.++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 3443 35689999999999995 468899999986543221 1247899999999999999999999
Q ss_pred eeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 135 ~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
+..++..++||||+. ++|.+++. ....+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCcc
Confidence 999999999999996 68999885 3456899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------------------CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc
Q 010529 215 LMKNSMDG------------------KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG 275 (508)
Q Consensus 215 ~a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~ 275 (508)
++...... ....++..|+|||.+.+. .++.++||||||+++|+|+||..|+..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 244 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG 244 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 98754410 122357789999998764 46889999999999999999997765331110000
Q ss_pred -------cchhhhhccc--------cCC-------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 276 -------ENLNLLMDSH--------LEG-------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 276 -------~~~~~~~~~~--------~~~-------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
......+... ... ......+..+.+++.+||..+|++|||+.+++.+-+-
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 0000000000 000 0011235678899999999999999999999987554
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=252.31 Aligned_cols=248 Identities=19% Similarity=0.254 Sum_probs=194.5
Q ss_pred ccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 72 DNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
|...++||+|.||+||+++ +++++.||+|.++.....+ .....+|+-+|+.+.|.|||+++++...+..+-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4556789999999999999 6779999999997544322 457899999999999999999999998899999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
. .+|..+... -++.++...+.+++.|+++||.|+|+++ +.|||+||.|.|++.+|.+||+|||+++.+.-. ..
T Consensus 84 d-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred h-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 5 778887744 5678999999999999999999999999 999999999999999999999999999866543 34
Q ss_pred cccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCC-CCchhhhhhh-----------ccc---hhhhhccccCC
Q 010529 225 YSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHI-PPSHALDMIR-----------GEN---LNLLMDSHLEG 288 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~-~~~~~~~~~~-----------~~~---~~~~~~~~~~~ 288 (508)
.+.|.+|.+|.++.|.+ |+...|+||-||++.|+.....| |++...+... ... +..+.+-...+
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 46789999999998754 78899999999999999875444 5543211110 011 11111111111
Q ss_pred CCC---------HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 289 KFS---------SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 289 ~~~---------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.++ +.....-.+++.+.|.-+|.+|.++++.+++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 111 1223344688899999999999999999876
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=291.74 Aligned_cols=250 Identities=22% Similarity=0.256 Sum_probs=190.9
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCC-------
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------- 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------- 139 (508)
.+|.+.+.||.|+||.||+|... +++.||||+++.... .....+.+|+.+++.++||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 45678889999999999999964 588999999975432 22346788999999999999999999987654
Q ss_pred ---cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 140 ---ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 140 ---~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
..++||||+++ +|...+.. ....+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCccccc
Confidence 78999999975 67777653 2447899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC-----ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-h------hccchhhhhc
Q 010529 217 KNSMDGK-----SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-I------RGENLNLLMD 283 (508)
Q Consensus 217 ~~~~~~~-----~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~------~~~~~~~~~~ 283 (508)
....... ...++..|+|||.+.+ ..++.++|||||||++|+|++|+.|+....... . ........+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 7654322 1235778999998865 346889999999999999999987664321000 0 0000000000
Q ss_pred cc--------------cC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SH--------------LE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~--------------~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.. .. .......+..+.+++.+||..+|.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00 00011235779999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=297.27 Aligned_cols=249 Identities=16% Similarity=0.226 Sum_probs=193.4
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
...|.+++.||.|+||.||++. ..++..||||++...... ....+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 3457889999999999999999 456899999998643222 2346889999999999999999999987543
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++...
T Consensus 94 ~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred eEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 358999999 789988884 457899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh-----hhh--cc------------ch
Q 010529 220 MDG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-----MIR--GE------------NL 278 (508)
Q Consensus 220 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----~~~--~~------------~~ 278 (508)
... ....+++.|++||.+.+ ..++.++||||||+++|+|++|..|+...... ... .. ..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07880 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA 248 (343)
T ss_pred ccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence 443 23467889999999875 45788999999999999999999876532110 000 00 00
Q ss_pred hhhhccc--cC-C---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 279 NLLMDSH--LE-G---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 279 ~~~~~~~--~~-~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
....... .. . ......+..+.+++.+||..||.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 00 0 0111235568899999999999999999999976
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=297.22 Aligned_cols=250 Identities=18% Similarity=0.222 Sum_probs=192.8
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeC------Cc
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~ 140 (508)
+.|.+++.||+|+||.||+|. ..++..||||++..... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 556788899999999999999 45688999999865321 2245688999999999999999999988643 34
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 97 ~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 97 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred EEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 67888887 789988874 346899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh-hh------ccchhhhh---------
Q 010529 221 DG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-IR------GENLNLLM--------- 282 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~------~~~~~~~~--------- 282 (508)
.. ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+....... .. ......+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
T cd07877 172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 251 (345)
T ss_pred ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHH
Confidence 43 23467889999999866 567889999999999999999998764321100 00 00000000
Q ss_pred ------ccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 283 ------DSHLEGKF---SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 283 ------~~~~~~~~---~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.......+ ....++.+.+++.+||..||.+|||+.+++.+-.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 00000000 0113567889999999999999999999998843
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=302.69 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=206.5
Q ss_pred ccccCCCCcccEEEEEEE-cC----CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 74 IVSESGEKAANVVYKGRL-EN----RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
..++||.|+||+||+|.| +. ..+||+|++..... +...++++|+-+|..++|||+++++|+|.... +.||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 457889999999999994 43 44689999875543 34678999999999999999999999997655 8899999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcc--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY-- 225 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-- 225 (508)
+++|+|.++++. +...+.....+.|..||++||.|||.++ ++||||-..||||..-..+||.|||+++........
T Consensus 779 mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred cccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 999999999976 5667889999999999999999999999 999999999999999999999999999977654322
Q ss_pred ----ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 226 ----STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 226 ----~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
...+.|||-|.++...|+.++|||||||++||++| |..|+.. ...+.+..++....+-..|+-++.++..
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g-----i~~~eI~dlle~geRLsqPpiCtiDVy~ 931 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG-----IPAEEIPDLLEKGERLSQPPICTIDVYM 931 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC-----CCHHHhhHHHhccccCCCCCCccHHHHH
Confidence 12456999999999999999999999999999998 5555433 2233444455444444556778889999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
++.+||..|+..||+|+++...+.+..+
T Consensus 932 ~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 932 VMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 9999999999999999999998877654
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=291.16 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=189.6
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
..+|.+++.||.|+||.||+|.. .+++.||||++......+ ...+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46788999999999999999995 458889999986543222 346789999999999999999999875433
Q ss_pred --cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 140 --ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 140 --~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
..++||||+. ++|...+.. ....+++..+..++.|+++||.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccch
Confidence 4699999996 567776643 3457999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC---------------ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhh-----hh--
Q 010529 218 NSMDGK---------------SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-----IR-- 274 (508)
Q Consensus 218 ~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~-- 274 (508)
...... ...+++.|+|||.+.+. .++.++||||||+++|+|++|+.|+....... +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12457789999987654 57889999999999999999997764321100 00
Q ss_pred c----------cchhhhhccccCCCCC-------HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 275 G----------ENLNLLMDSHLEGKFS-------SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 275 ~----------~~~~~~~~~~~~~~~~-------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
. ...............+ ......+.+++.+||..||.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 0 0000000000000000 1123568899999999999999999999865
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=281.22 Aligned_cols=236 Identities=22% Similarity=0.254 Sum_probs=193.7
Q ss_pred CCCCcccEEEEEEEc-CCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCH
Q 010529 78 SGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 78 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
||.|+||.||++... +++.|++|.+...... ....+..|+.+++.++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999964 5888999998765432 244789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----CccccCC
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNL 229 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~ 229 (508)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999963 346899999999999999999999999 999999999999999999999999998765442 3345788
Q ss_pred CCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccC
Q 010529 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYE 309 (508)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 309 (508)
.|++||...+...+.++|+||||+++|+|++|..|+...... .....+.. ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~----~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK----EIYEKILK--DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999999998888889999999999999999999876432110 11111111 112234445778999999999999
Q ss_pred CCCCCCh---HHHHHH
Q 010529 310 PRERPST---KNLVVT 322 (508)
Q Consensus 310 p~~Rps~---~~il~~ 322 (508)
|++||++ .+++.+
T Consensus 232 p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 232 PTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhhCCCcccHHHHHhC
Confidence 9999999 555543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=279.30 Aligned_cols=218 Identities=22% Similarity=0.257 Sum_probs=176.8
Q ss_pred CcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhhc
Q 010529 81 KAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFH 159 (508)
Q Consensus 81 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~ 159 (508)
|.+|.||+++ ..+++.||+|++.... .+.+|...+....||||+++++++.+....++||||++|++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 7899999999 4568899999996543 234455555566799999999999999999999999999999999863
Q ss_pred cCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-CccccCCCCCCccccc
Q 010529 160 WEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLK 238 (508)
Q Consensus 160 ~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~ 238 (508)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 346899999999999999999999999 999999999999999999999999987654433 2334567799999998
Q ss_pred cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 010529 239 NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPST 316 (508)
Q Consensus 239 ~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 316 (508)
+..++.++||||+|+++|+|++|..|+...... .........+...+..+.+++.+||+.||.+||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888899999999999999999998654321100 00001112334456779999999999999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=292.42 Aligned_cols=247 Identities=18% Similarity=0.228 Sum_probs=188.1
Q ss_pred ccccccCCCCcccEEEEEEEc-C--CCEEEEEEecCCCCC--ChhHHHHHHHHhccC-CCCCCcceeeeeeeC----Ccc
Q 010529 72 DNIVSESGEKAANVVYKGRLE-N--RQWIAVKKFTKVAWP--DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG----DER 141 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~----~~~ 141 (508)
|.+.+.||.|+||.||++... + +..||||++...... ....+.+|+.+++++ .||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 567888999999999999953 4 778999998643221 245688999999999 699999999875432 356
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++++||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++.....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 89999985 68998885 3557899999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh-hhh-----------------
Q 010529 222 G--------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-MIR----------------- 274 (508)
Q Consensus 222 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~----------------- 274 (508)
. ....++..|+|||++.+ ..++.++||||||+++|+|++|..|+...... ...
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 22457889999998765 46789999999999999999999765432100 000
Q ss_pred -ccchhhhhc---cccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 275 -GENLNLLMD---SHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 275 -~~~~~~~~~---~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......... ..... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000 00000 0011235678999999999999999999999877
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=315.62 Aligned_cols=146 Identities=24% Similarity=0.282 Sum_probs=130.6
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
+..|.+++.||.|+||.||+|... +++.||||+++...... ...+..|+.++..++||||+++++++......|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 457889999999999999999965 68899999997543222 35788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
|||+.|++|.+++.. ...+++..++.|+.||+.||.|||..+ |+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999863 456889999999999999999999999 9999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=297.44 Aligned_cols=249 Identities=19% Similarity=0.226 Sum_probs=194.4
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc-----
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE----- 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~----- 140 (508)
.+.|.++..||.|++|.||+|+. .++..||||++.... ......+.+|+.+++.+.||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 45678899999999999999995 458889999986432 1223567889999999999999999998766554
Q ss_pred -ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 141 -RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 141 -~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
.++|+||+ +++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 94 ~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 679999884 457999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----h--ccchhhhh--------
Q 010529 220 MDG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----R--GENLNLLM-------- 282 (508)
Q Consensus 220 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----~--~~~~~~~~-------- 282 (508)
... ....++..|+|||.+.+ ..++.++||||||+++|+|+||+.|+........ . ......++
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 433 34467888999999865 3578899999999999999999987653211000 0 00000000
Q ss_pred ----cccc---CCC---CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 283 ----DSHL---EGK---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 283 ----~~~~---~~~---~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.... ... .....+..+.+++.+||..+|.+|||+.+|+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000 000 001236789999999999999999999999977
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=281.04 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=199.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-C-CC----CcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-R-KR----LANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----Iv~~~~~~~~~~~~~ 142 (508)
..|.+++.+|+|.||.|-.+.. ..+..||||+++... ...+.-+-|+++|.++. + |+ +|.+.+||...++.|
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 4578899999999999999994 457889999997654 23456778999999993 2 33 788888898899999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC------------------
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE------------------ 204 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~------------------ 204 (508)
||+|.+ |.|+.+++..+.-.+++...+..++.|+++++.|||+.+ ++|.||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999998 789999998877778999999999999999999999999 999999999999832
Q ss_pred --CCCeEEcccCCccccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh-------hhhh
Q 010529 205 --DGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL-------DMIR 274 (508)
Q Consensus 205 --~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-------~~~~ 274 (508)
+..++|+|||.|...... ...+.|..|.|||++.+-.++.++||||+||||.|++||...|+.+.. +...
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 234899999999877665 455789999999999999999999999999999999999987765421 1111
Q ss_pred ccchhhhhccc----------c---------------CCC--------CCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 010529 275 GENLNLLMDSH----------L---------------EGK--------FSSEEATQVVGLASQCLQYEPRERPSTKNLVV 321 (508)
Q Consensus 275 ~~~~~~~~~~~----------~---------------~~~--------~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~ 321 (508)
+.-...++... + ... ....+..++.+|+.+||..||.+|+|+.|++.
T Consensus 326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 11111111100 0 000 11234577999999999999999999999998
Q ss_pred HH
Q 010529 322 TL 323 (508)
Q Consensus 322 ~L 323 (508)
|-
T Consensus 406 Hp 407 (415)
T KOG0671|consen 406 HP 407 (415)
T ss_pred CH
Confidence 73
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=260.49 Aligned_cols=265 Identities=19% Similarity=0.256 Sum_probs=212.2
Q ss_pred CCCCCccccCHHHHHHHhcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-CC
Q 010529 49 EEAPLFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RK 126 (508)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~ 126 (508)
....+...|+++.......+-++|++++++|+|.|++||.|. ..++..++||++++.. .+.+.+|+++|..|+ ||
T Consensus 17 n~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~ 93 (338)
T KOG0668|consen 17 NEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGP 93 (338)
T ss_pred cccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCC
Confidence 334455678888887778889999999999999999999999 6778889999998654 567999999999995 99
Q ss_pred CCcceeeeeeeC--CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 127 RLANLIGYCCAG--DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 127 nIv~~~~~~~~~--~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
||++++++..+. ..+.||+||+++.+...+. ..++...+..++.++++||.|||+.| |+|||+||.|+++|.
T Consensus 94 NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh 167 (338)
T KOG0668|consen 94 NIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDH 167 (338)
T ss_pred CeeehhhhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeech
Confidence 999999998765 3578999999998877765 35788889999999999999999999 999999999999996
Q ss_pred C-CCeEEcccCCccccCCCCcc---ccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh---h----
Q 010529 205 D-GDPRLSCFGLMKNSMDGKSY---STNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD---M---- 272 (508)
Q Consensus 205 ~-~~~kl~Dfg~a~~~~~~~~~---~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~---~---- 272 (508)
. ..++|+|+|+|....++..+ +.+..|--||.+.. ..|+..-|+|||||+|..|+..+.||+-.... .
T Consensus 168 ~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIa 247 (338)
T KOG0668|consen 168 ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIA 247 (338)
T ss_pred hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHH
Confidence 5 45999999999998888654 45677899999875 56788999999999999999999987632100 0
Q ss_pred --hh---------------ccchhhh--------hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 273 --IR---------------GENLNLL--------MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 273 --~~---------------~~~~~~~--------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+. ......+ +..........-.+++..+|+.+.|..|-.+|+|+.|++.|
T Consensus 248 kVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 248 KVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 00 0001111 11111111122235889999999999999999999999987
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=288.29 Aligned_cols=240 Identities=23% Similarity=0.244 Sum_probs=200.8
Q ss_pred ccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 76 SESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
+.||+|-||+||-|. .++|+.||||++.+.... ...++..|+.||+++.||.||.+-..|...+..+.|||-+.|.-
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM 649 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM 649 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence 578999999999999 567999999999876543 34679999999999999999999999999999999999997555
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC---CCeEEcccCCccccCCC---Cccc
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED---GDPRLSCFGLMKNSMDG---KSYS 226 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~Dfg~a~~~~~~---~~~~ 226 (508)
|.-+| ..+.+.+++....-++.||+.||.|||.++ |+|+||||+|||+.+. -++||||||+|+...+. .+.+
T Consensus 650 LEMIL-SsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 650 LEMIL-SSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHH-HhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 55444 457889999999999999999999999999 9999999999999644 46999999999988775 5678
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--c-CCCCCHHHHHHHHHHHH
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--L-EGKFSSEEATQVVGLAS 303 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~l~~ 303 (508)
||+.|+|||+++...|...-|+||.||++|.-++|.-||-+ ++++...+... + ......+.+...++||.
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE-------dEdIndQIQNAaFMyPp~PW~eis~~AidlIn 800 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE-------DEDINDQIQNAAFMYPPNPWSEISPEAIDLIN 800 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC-------ccchhHHhhccccccCCCchhhcCHHHHHHHH
Confidence 99999999999999999999999999999999999877643 22222222211 1 12234567888999999
Q ss_pred HhcccCCCCCCChHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+|+..-.+|-|....+.|.|
T Consensus 801 ~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 801 NLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred HHHHHHHHHhcchHhhccchh
Confidence 999999999999988877743
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=277.19 Aligned_cols=251 Identities=21% Similarity=0.260 Sum_probs=195.1
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC--CCCCCcceeeeeeeC----Ccceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL--RRKRLANLIGYCCAG----DERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~~~~~~~~~----~~~~lv 144 (508)
+-.+++.||+|.||+||+|.|+++. ||||++... +.+.+.+|.++.+.. +|+||+.+++.-..+ ..++||
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~-VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGED-VAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred eeEEEEEecCccccceeeccccCCc-eEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 3467889999999999999997654 999999643 456799999999875 999999999875433 357999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-----C--CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-----G--RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-----~--~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
++|.+.|||+++| ....++....++++..++.||+|||.. | .|.|||||+.||||..+|...|+|+|+|.
T Consensus 288 TdYHe~GSL~DyL---~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 288 TDYHEHGSLYDYL---NRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eecccCCcHHHHH---hhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999999 457899999999999999999999963 2 38999999999999999999999999997
Q ss_pred ccCCC--------CccccCCCCCCccccccCC----cC--ccccchhhHHHHHHHHhC----------CCCCCchhhhhh
Q 010529 218 NSMDG--------KSYSTNLAYTPPEYLKNGR----VI--PESVIYSFGTVLLDLLSG----------KHIPPSHALDMI 273 (508)
Q Consensus 218 ~~~~~--------~~~~~t~~y~aPE~~~~~~----~~--~~~Dv~slG~vl~elltg----------~~~~~~~~~~~~ 273 (508)
..... ...+||.+|||||++.... +. ..+||||||.|+||+... +.||.+.+-...
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 65543 3457999999999996432 21 368999999999999753 233332221111
Q ss_pred hccchhhhh-ccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 274 RGENLNLLM-DSHLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 274 ~~~~~~~~~-~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..+.+..++ ...+++.. .......+.++|+.||..||.-|-|+--|-+.|..+..
T Consensus 445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 112222211 12222222 23557788999999999999999999999999988864
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=289.53 Aligned_cols=251 Identities=18% Similarity=0.195 Sum_probs=209.9
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCC-EEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQ-WIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+++.+.+..||-|+||.|-++..++.. .+|+|.+++....+ .+.+..|-.+|..++.|.||++|..|.+....|+
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 4566677889999999999999976543 48888887655444 4457789999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
.||-|-||.|+..++ ..+.++..+..-++..+++|++|||+++ ||+|||||+|.+++.+|-+||.|||+|+....+.
T Consensus 498 LmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999999999997 5678999999999999999999999999 9999999999999999999999999999877663
Q ss_pred ---ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 224 ---SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 224 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
+++|||.|.|||++.....+...|.||||+++|||+||.+||.+. ..+ .....++...-.-.+|...++...+
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-dpm---ktYn~ILkGid~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-DPM---KTYNLILKGIDKIEFPRRITKTATD 650 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC-chH---HHHHHHHhhhhhhhcccccchhHHH
Confidence 578999999999999999999999999999999999999776432 111 1112222222223456777888999
Q ss_pred HHHHhcccCCCCCCC-----hHHHHHHHHH
Q 010529 301 LASQCLQYEPRERPS-----TKNLVVTLAR 325 (508)
Q Consensus 301 l~~~cl~~~p~~Rps-----~~~il~~L~~ 325 (508)
||.++...+|.+|.- +.+|-+|-|-
T Consensus 651 Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 651 LIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred HHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 999999999999964 6777777543
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=275.24 Aligned_cols=237 Identities=20% Similarity=0.261 Sum_probs=197.2
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~l 143 (508)
..+++++.+||+|+||.|-++..+ +...+|||++++... .+.+--+.|-++|... +-|.+++++.+|..-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 456778999999999999999954 477899999986532 2344456777888777 67889999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC--
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-- 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~-- 221 (508)
||||+.||+|--.+. .-+.+.++.+.-++..|+-||-+||++| ||+||||..|||+|.+|++||+|||+++.-..
T Consensus 428 VMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred EEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCC
Confidence 999999999988876 4567889999999999999999999999 99999999999999999999999999874332
Q ss_pred --CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 222 --GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 222 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
..+++|||-|+|||++...+|+...|.|||||+||||+.|++||.++..+ +-+..+.+.. -.+|...+.+..
T Consensus 505 ~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~----elF~aI~ehn--vsyPKslSkEAv 578 (683)
T KOG0696|consen 505 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQAIMEHN--VSYPKSLSKEAV 578 (683)
T ss_pred cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHcc--CcCcccccHHHH
Confidence 35678999999999999999999999999999999999999886544211 1122223322 235777888999
Q ss_pred HHHHHhcccCCCCCC
Q 010529 300 GLASQCLQYEPRERP 314 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rp 314 (508)
.++...|.+.|.+|.
T Consensus 579 ~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 579 AICKGLLTKHPGKRL 593 (683)
T ss_pred HHHHHHhhcCCcccc
Confidence 999999999999994
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=266.81 Aligned_cols=255 Identities=21% Similarity=0.231 Sum_probs=195.8
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeC--------
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-------- 138 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-------- 138 (508)
+.|.-+.+||+|.||+||+|+. ++|+.||+|++-..+. .-...-.+|+++|..|.|+|++.++.+|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 4566778899999999999994 5588899988754322 2234678999999999999999999998642
Q ss_pred CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
..+||||.+|+ -+|.-+|.+ ....++..++.+++.++..||.|+|... |+|||+|+.|+|++.+|.+||+|||+++.
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccc
Confidence 34799999997 678888854 4567999999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCC--------ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhh-------hhhccchhh--
Q 010529 219 SMDGK--------SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-------MIRGENLNL-- 280 (508)
Q Consensus 219 ~~~~~--------~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-------~~~~~~~~~-- 280 (508)
+.... ..+.|.+|.+||.+.| ..|+++.|||.-||++.||+|+.+.+.+.... .+-+..-..
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 55432 2345899999999987 56899999999999999999998766543211 000110001
Q ss_pred -------hhccccCCCCC-------------HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 281 -------LMDSHLEGKFS-------------SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 281 -------~~~~~~~~~~~-------------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
++...-..+.+ ..-.++..+|+.+++..||.+|+++++++.|-.-..
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 11111000011 011346789999999999999999999999876654
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=305.34 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=205.1
Q ss_pred cccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 75 VSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+.||.|.||.|++|... ....||||.++..... +.+.+..|+++|+.+ .|+||+.++|+|...+..++|
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v 380 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI 380 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence 347899999999999843 1456999999865433 456899999999999 799999999999998999999
Q ss_pred eecCCCCCHHHHhhccC------------C--CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEE
Q 010529 145 AEYMPNDTLAKHLFHWE------------K--QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl 210 (508)
+||+..|+|.+++++.. . ..++..+.+.++.||+.|++||++.. +|||||-..|||++.+..+||
T Consensus 381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kI 459 (609)
T KOG0200|consen 381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKI 459 (609)
T ss_pred EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEE
Confidence 99999999999997643 0 13889999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCCCccc-----c--CCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc
Q 010529 211 SCFGLMKNSMDGKSYS-----T--NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283 (508)
Q Consensus 211 ~Dfg~a~~~~~~~~~~-----~--t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~ 283 (508)
+|||+++.......+. + ...|||||.+....|+.++|||||||+||||+|...+|+.... ....+-..+.
T Consensus 460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l~ 536 (609)
T KOG0200|consen 460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFLK 536 (609)
T ss_pred ccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHHh
Confidence 9999999655543321 1 2349999999999999999999999999999997655544311 0111222344
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 284 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+..+...|..++.++.++|..||+.+|++||++.++.+.+....
T Consensus 537 ~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 537 EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 44455566777899999999999999999999999999998853
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=286.26 Aligned_cols=250 Identities=19% Similarity=0.207 Sum_probs=197.3
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCccee
Q 010529 57 FSFLDLRAATNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLI 132 (508)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~ 132 (508)
..|..|+.+...-+-+..|+.||-|+||+|.+++ .++...+|+|.+++.+--. ..-...|-.||..-+.+-||++|
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 3455667777777788889999999999999999 6678889999997643222 23477899999999999999999
Q ss_pred eeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcc
Q 010529 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212 (508)
Q Consensus 133 ~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 212 (508)
..|.+.+.+|+||+|++||++-.+|. ..+-|++..+.-++..+..|+++.|..| +|||||||+|||||.+|++||.|
T Consensus 696 ySFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTD 772 (1034)
T KOG0608|consen 696 YSFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTD 772 (1034)
T ss_pred EEeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeee
Confidence 99999999999999999999999886 4667889999999999999999999999 99999999999999999999999
Q ss_pred cCCccccC---C------C-------------------------------------CccccCCCCCCccccccCCcCccc
Q 010529 213 FGLMKNSM---D------G-------------------------------------KSYSTNLAYTPPEYLKNGRVIPES 246 (508)
Q Consensus 213 fg~a~~~~---~------~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~ 246 (508)
||++.-+. + + ...+||+.|+|||++....|+..+
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 99985221 0 0 123589999999999999999999
Q ss_pred cchhhHHHHHHHHhCCCCCCchhh--hhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010529 247 VIYSFGTVLLDLLSGKHIPPSHAL--DMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERP 314 (508)
Q Consensus 247 Dv~slG~vl~elltg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp 314 (508)
|.||.|||||||+.|+.||..+.- .......++..++ -......+++..++|.++.. +++.|.
T Consensus 853 dwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~----~~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 853 DWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLH----IPYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred hhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccc----cccccccCHHHHHHHHHHhc-Chhhhh
Confidence 999999999999999988754321 1111222222222 22233456667777766432 566663
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=249.83 Aligned_cols=195 Identities=17% Similarity=0.207 Sum_probs=167.6
Q ss_pred cccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC-CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCC
Q 010529 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.-+..||+|++|.|-+.+ ..+|...|||.+.... .+..++.++|+.+..+. .+|.+|.++|.....+..++.||.|.
T Consensus 49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~ 128 (282)
T KOG0984|consen 49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD 128 (282)
T ss_pred hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh
Confidence 346788999999999999 5789999999997543 23356788899887776 89999999999999999999999995
Q ss_pred CCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---c
Q 010529 150 NDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---S 224 (508)
Q Consensus 150 ~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 224 (508)
.||+.+.++. .++.+++..+-+|+..|+.||.|||++-.+||||+||+|||++.+|++|+||||++..+.++- .
T Consensus 129 -tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~ 207 (282)
T KOG0984|consen 129 -TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM 207 (282)
T ss_pred -hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH
Confidence 7888766532 567899999999999999999999998669999999999999999999999999998777652 2
Q ss_pred cccCCCCCCcccccc----CCcCccccchhhHHHHHHHHhCCCCCCch
Q 010529 225 YSTNLAYTPPEYLKN----GRVIPESVIYSFGTVLLDLLSGKHIPPSH 268 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~vl~elltg~~~~~~~ 268 (508)
..|.-.|||||.+.. ..|+.++||||||+++.||.+++.|++.+
T Consensus 208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 468889999999863 46899999999999999999999886544
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=264.05 Aligned_cols=234 Identities=23% Similarity=0.273 Sum_probs=191.5
Q ss_pred cccEEEEEEEc-CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhhc
Q 010529 82 AANVVYKGRLE-NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFH 159 (508)
Q Consensus 82 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~ 159 (508)
+||.||+|... +++.|++|++....... .+.+.+|++.+++++|+||+++++++......++||||+.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58899999965 48899999997665444 67899999999999999999999999998999999999999999999863
Q ss_pred cCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---CccccCCCCCCccc
Q 010529 160 WEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEY 236 (508)
Q Consensus 160 ~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~ 236 (508)
...+++..++.++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 223899999999999999999999999 999999999999999999999999998866553 34567889999999
Q ss_pred cccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH--HHHHHHHHHHHhcccCCCCCC
Q 010529 237 LKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE--EATQVVGLASQCLQYEPRERP 314 (508)
Q Consensus 237 ~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~cl~~~p~~Rp 314 (508)
+.+..++.++||||||+++++|++|..|+.... ........+........... .+..+.+++.+||..+|++||
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhcc
Confidence 988888999999999999999999987754310 00111111111111111111 567899999999999999999
Q ss_pred ChHHHHHH
Q 010529 315 STKNLVVT 322 (508)
Q Consensus 315 s~~~il~~ 322 (508)
++.+++++
T Consensus 234 ~~~~~~~~ 241 (244)
T smart00220 234 TAEEALQH 241 (244)
T ss_pred CHHHHhhC
Confidence 99999873
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=271.34 Aligned_cols=248 Identities=20% Similarity=0.267 Sum_probs=193.8
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC-CCC------hhHHHHHHHHhccCCCCCCcceeeeeee-CCcc
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA-WPD------PTQFKEEAEGVGKLRRKRLANLIGYCCA-GDER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~------~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~ 141 (508)
.|.++..||+|+|++||++. +...+.||||+-..+. ..+ .+-..+|.+|.+.|+||.||++|+++.- ...+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 36678889999999999999 6668899999864322 111 2246789999999999999999999864 4678
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeC---CCCCeEEcccCCcc
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFD---EDGDPRLSCFGLMK 217 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~---~~~~~kl~Dfg~a~ 217 (508)
|-|+|||+|-+|+-+|+ ....+++.++..|+.||+.||.||.+.. +|||-||||.|||+. ..|.+||.|||+++
T Consensus 544 CTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred eeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 99999999999999997 5667999999999999999999999875 699999999999994 45789999999998
Q ss_pred ccCCCC-----------ccccCCCCCCccccccC----CcCccccchhhHHHHHHHHhCCCCCCchhhh--hhhccchhh
Q 010529 218 NSMDGK-----------SYSTNLAYTPPEYLKNG----RVIPESVIYSFGTVLLDLLSGKHIPPSHALD--MIRGENLNL 280 (508)
Q Consensus 218 ~~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~~~~~~~ 280 (508)
...... ...||.+|++||.+.-+ +.+.+.||||.||++|..+.|+.||...... .+....+-.
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk 701 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK 701 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence 765432 24579999999998633 4678999999999999999999987543211 111111111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
. ..+.-+..+.++.+...||.+||++.-++|....++..+
T Consensus 702 A--tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 702 A--TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred c--eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 1 011112234567788999999999999999998887755
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=296.13 Aligned_cols=250 Identities=21% Similarity=0.198 Sum_probs=167.5
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cC----CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeee------ee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-EN----RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGY------CC 136 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~------~~ 136 (508)
..++|.+.+.||+|+||.||+|+. .+ +..||||++..... .+.+..+ .+....+.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 456788999999999999999995 44 68899998864331 1112221 1222223333332222 23
Q ss_pred eCCcceeeeecCCCCCHHHHhhccCC------------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCc
Q 010529 137 AGDERLLVAEYMPNDTLAKHLFHWEK------------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198 (508)
Q Consensus 137 ~~~~~~lv~E~~~~~sL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~ 198 (508)
.+...+|||||+.+++|.+++..... .......+..|+.||+.||.|||+.+ |+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHH
Confidence 45678999999999999998864211 01123345679999999999999999 999999999
Q ss_pred ceeeCC-CCCeEEcccCCccccCCC-----CccccCCCCCCccccccC----------------------CcCccccchh
Q 010529 199 RVLFDE-DGDPRLSCFGLMKNSMDG-----KSYSTNLAYTPPEYLKNG----------------------RVIPESVIYS 250 (508)
Q Consensus 199 Nill~~-~~~~kl~Dfg~a~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~~Dv~s 250 (508)
|||++. ++.+||+|||+++....+ ....+++.|+|||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 689999999999754332 345688999999965422 2334679999
Q ss_pred hHHHHHHHHhCCCCCCchhhhhh---hc--cchhhhhccccCCCCCHH----------HHHHHHHHHHHhcccCCCCCCC
Q 010529 251 FGTVLLDLLSGKHIPPSHALDMI---RG--ENLNLLMDSHLEGKFSSE----------EATQVVGLASQCLQYEPRERPS 315 (508)
Q Consensus 251 lG~vl~elltg~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~----------~~~~l~~l~~~cl~~~p~~Rps 315 (508)
|||+||||+++..+......... .. ..... +..........+ ......+|+.+||+.||.+|||
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t 443 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVA-WRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS 443 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHH-HHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence 99999999998654333211110 00 00000 000001111111 1233558999999999999999
Q ss_pred hHHHHHHH
Q 010529 316 TKNLVVTL 323 (508)
Q Consensus 316 ~~~il~~L 323 (508)
+.++++|-
T Consensus 444 a~e~L~Hp 451 (566)
T PLN03225 444 AKAALAHP 451 (566)
T ss_pred HHHHhCCc
Confidence 99999883
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=281.41 Aligned_cols=255 Identities=16% Similarity=0.162 Sum_probs=179.6
Q ss_pred CCcccccccCCCCcccEEEEEEE-----------------cCCCEEEEEEecCCCCCChhH--------------HHHHH
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-----------------ENRQWIAVKKFTKVAWPDPTQ--------------FKEEA 117 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~ 117 (508)
.++|.+.++||+|+||.||+|.. ..++.||||++........++ +..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45678889999999999999963 235679999986543222223 34466
Q ss_pred HHhccCCCCCC-----cceeeeeee--------CCcceeeeecCCCCCHHHHhhccC----------------------C
Q 010529 118 EGVGKLRRKRL-----ANLIGYCCA--------GDERLLVAEYMPNDTLAKHLFHWE----------------------K 162 (508)
Q Consensus 118 ~~l~~l~h~nI-----v~~~~~~~~--------~~~~~lv~E~~~~~sL~~~l~~~~----------------------~ 162 (508)
.++.+++|.++ ++++++|.. .+..+|||||+++++|.+++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 677787753 356799999999999999886321 1
Q ss_pred CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----ccccCCCCCCcccc
Q 010529 163 QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-----SYSTNLAYTPPEYL 237 (508)
Q Consensus 163 ~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~~t~~y~aPE~~ 237 (508)
..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+++.|+|||.+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence 13467788999999999999999999 9999999999999999999999999987543322 12347899999987
Q ss_pred ccCC--------------------c--CccccchhhHHHHHHHHhCCCCCCchhh---hhhhc-cch----hhhhccccC
Q 010529 238 KNGR--------------------V--IPESVIYSFGTVLLDLLSGKHIPPSHAL---DMIRG-ENL----NLLMDSHLE 287 (508)
Q Consensus 238 ~~~~--------------------~--~~~~Dv~slG~vl~elltg~~~~~~~~~---~~~~~-~~~----~~~~~~~~~ 287 (508)
.... + ..+.||||+||++++|++|..++..... ..... ... .........
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~ 462 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD 462 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence 5321 1 1247999999999999999754332210 00000 000 001011111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCC---CCCCChHHHHHHHH
Q 010529 288 GKFSSEEATQVVGLASQCLQYEP---RERPSTKNLVVTLA 324 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p---~~Rps~~~il~~L~ 324 (508)
-......+....+|+.+||..+| .+|+|+.+++.|-+
T Consensus 463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 11223456788999999999766 68999999998843
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=258.58 Aligned_cols=251 Identities=17% Similarity=0.194 Sum_probs=203.3
Q ss_pred ccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeC-Cccee
Q 010529 72 DNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAG-DERLL 143 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-~~~~l 143 (508)
.++...+-+|.||.||+|.|.+ .+.|-||.++....+- ...++.|...+..+.|||+..+.+++.++ ..++.
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V 365 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV 365 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence 4455566889999999997643 3446788887654332 35688999999999999999999998765 56788
Q ss_pred eeecCCCCCHHHHhhcc------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 144 VAEYMPNDTLAKHLFHW------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
++.++.-|+|..+|.-+ ..+.++..+...++.|++.|++|||+++ +||.||-..|+++|+..++||+|=.+++
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhcc
Confidence 99999889999999732 2346778889999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCcc------ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 218 NSMDGKSY------STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 218 ~~~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
...+.... .....||+||.+....|+..+|||||||++|||+|-...|..+. ....+...+....+-.-|
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI----DPfEm~~ylkdGyRlaQP 520 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI----DPFEMEHYLKDGYRLAQP 520 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc----CHHHHHHHHhccceecCC
Confidence 77766433 23567999999999999999999999999999999554444332 222233444444444457
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.++++++..+|..||...|++||++++++.-|....
T Consensus 521 ~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 521 FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 788999999999999999999999999999987764
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=280.12 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=206.5
Q ss_pred cCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+.-.+|.+++++|.|.||.||+++ ..++...|||+++.....+..-+.+|+-+++..+|||||.++|-+......+++|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 455678899999999999999999 6679999999999888778888999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC----C
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM----D 221 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~----~ 221 (508)
|||.||+|.+..+ -.+++++.++..++...+.||.|||+.| =+|||||-.|||+++.|.+|+.|||.+.... .
T Consensus 92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 9999999998765 4678999999999999999999999999 8999999999999999999999999876443 3
Q ss_pred CCccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC---CCCCHHHH
Q 010529 222 GKSYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFSSEEA 295 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 295 (508)
..++.||++|||||+.. .+.|...+|||++|++..|+---++| ..+.-. ......+...... -.-....+
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpp-lfdlhp---mr~l~LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPP-LFDLHP---MRALFLMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCc-ccccch---HHHHHHhhccCCCCCcccCCccch
Confidence 46789999999999874 46789999999999999999777644 222111 1111111111111 11123456
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+.+|++.|+.++|.+|||+..++.|
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheec
Confidence 779999999999999999999988875
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=253.75 Aligned_cols=242 Identities=17% Similarity=0.253 Sum_probs=194.9
Q ss_pred CCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC---hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
...++.++.+||+|+|+.|.+++ .++.+.+|+|++++....+ ..=...|-.+..+- +||.+|-++.+|..+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 35678899999999999999999 5568899999998754333 33456677777766 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC--
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM-- 220 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~-- 220 (508)
+|.||++||+|--++. ....++++.+.-+...|+-||.|||+.| ||+||||..|||+|..|++||.|+|.++.-.
T Consensus 328 fvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 9999999999866664 4567999999999999999999999999 9999999999999999999999999987432
Q ss_pred --CCCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccc----hhhhhccccCCCCCHHH
Q 010529 221 --DGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGEN----LNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 221 --~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 294 (508)
...+++|||.|+|||++++..|....|.|+|||+++||+.|+.||.--..+...... ++.++...++ .|...
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir--iprsl 482 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR--IPRSL 482 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc--cccee
Confidence 235678999999999999999999999999999999999999887532211111111 1222222222 34444
Q ss_pred HHHHHHHHHHhcccCCCCCC
Q 010529 295 ATQVVGLASQCLQYEPRERP 314 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rp 314 (508)
+-....++..-|.+||.+|.
T Consensus 483 svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhc
Confidence 55667788889999999994
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-33 Score=263.67 Aligned_cols=249 Identities=19% Similarity=0.189 Sum_probs=195.8
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC------CCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR------RKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~~~~~~~~~~~~~l 143 (508)
.|.+.+..|.|-|++|.+|.. ..|+.||||+|..+..- .+.-+.|+++|++|. --|+++++..|.+.+++||
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 466777789999999999994 45889999999765432 345678999999994 2479999999999999999
Q ss_pred eeecCCCCCHHHHhhcc-CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCccccCC
Q 010529 144 VAEYMPNDTLAKHLFHW-EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMD 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~~ 221 (508)
|+|-+. .+|.++|+.. .+..|....+..++.|+.-||..|...+ |+|.||||.||||+.. ..+||||||.|.....
T Consensus 512 VFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 512 VFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred Eehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCcccccccc
Confidence 999984 8899999753 3446888999999999999999999999 9999999999999854 5689999999886655
Q ss_pred C--CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-------hccchhh------hhcccc
Q 010529 222 G--KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-------RGENLNL------LMDSHL 286 (508)
Q Consensus 222 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-------~~~~~~~------~~~~~~ 286 (508)
. +.+..+..|.|||++.|-+|+...|+||.||+||||.||+.+|++.....+ .+.-... +.+..+
T Consensus 590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHF 669 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHF 669 (752)
T ss_pred ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhc
Confidence 4 344556789999999999999999999999999999999998887522111 0000000 000000
Q ss_pred --------------------------C------------CCCC---HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 287 --------------------------E------------GKFS---SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 287 --------------------------~------------~~~~---~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
. ..++ .....++.+|+.+||.+||++|.|..++|.|
T Consensus 670 D~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 670 DQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred ccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0 0011 2345678899999999999999999999976
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-33 Score=248.52 Aligned_cols=245 Identities=19% Similarity=0.251 Sum_probs=188.0
Q ss_pred cccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccceeeee
Q 010529 75 VSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DERLLVAE 146 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~~lv~E 146 (508)
-+.||.|+||.||.++. ++|+.||+|++...- ....+++.+|+++|.-++|.|++..+++..-. ...|.|+|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 46789999999999994 568999999986432 22356899999999999999999998876533 35689999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCc--
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKS-- 224 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 224 (508)
.|. .+|..++. ..+.++...+.-++.||++||.|||+.+ |.||||||.|.|++.+..+||||||+++.......
T Consensus 138 LmQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 138 LMQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred HHH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence 995 67888876 6778999999999999999999999999 99999999999999999999999999997665432
Q ss_pred ---cccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCch--------hhhhhhc-----------cchhhh
Q 010529 225 ---YSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSH--------ALDMIRG-----------ENLNLL 281 (508)
Q Consensus 225 ---~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~--------~~~~~~~-----------~~~~~~ 281 (508)
.+.|.+|.|||++.| ..|+...||||.||++.||+..+..|... ..+.... .....+
T Consensus 214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~ 293 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV 293 (449)
T ss_pred hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence 345789999999987 46899999999999999999887655321 0111111 111112
Q ss_pred hccccCCC-CC--------HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 282 MDSHLEGK-FS--------SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 282 ~~~~~~~~-~~--------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+......+ ++ .....+...+...++..||+.|.+..+.+.++
T Consensus 294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 22211111 10 11234456778889999999999999999875
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=253.12 Aligned_cols=131 Identities=18% Similarity=0.185 Sum_probs=113.2
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-----C---CCCcceeeeeee----
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-----R---KRLANLIGYCCA---- 137 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~~~~~~~~---- 137 (508)
+|-++++||=|.|++||+++ ..+.+.||+|+++... ...+.-+.||++|++++ | .+||++++.|..
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 67889999999999999999 5678899999986432 33566789999999882 3 359999999875
Q ss_pred CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~ 203 (508)
+.++|||+|++ |.+|-.+|....-+.++...+..|+.||+.||.|||...+|||.||||+|||+.
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 45789999999 889999998777778999999999999999999999885599999999999993
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=273.85 Aligned_cols=240 Identities=21% Similarity=0.215 Sum_probs=178.6
Q ss_pred CCcccccccCCCCccc-EEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAAN-VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
|+..+++ |.|+.| .||+|... |+.||||++-... ..-..+|+..|+.- .|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4444444 777766 47999985 4579999985432 33567999999998 79999999999888899999999
Q ss_pred cCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---C--CCeEEcccCCcccc
Q 010529 147 YMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---D--GDPRLSCFGLMKNS 219 (508)
Q Consensus 147 ~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~--~~~kl~Dfg~a~~~ 219 (508)
.|. .+|.+++... ..........+.+..|+++||+|||+.+ ||||||||.||||+. + .+++|+|||+++..
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 995 8999999642 1111111445778999999999999999 999999999999964 3 46899999999877
Q ss_pred CCCC-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCC-CCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 220 MDGK-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK-HIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 220 ~~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
..+. ...||-+|+|||++....-+...||||||||+|..++|. .||.... ... . ..+....-.....
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~-~R~--~--NIl~~~~~L~~L~ 736 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL-ERQ--A--NILTGNYTLVHLE 736 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH-Hhh--h--hhhcCccceeeec
Confidence 6553 346889999999999888888999999999999999984 4543321 110 0 0000000000000
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+....+..+||.+|+..+|..||++.+|+.|
T Consensus 737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 737 PLPDCEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred cCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0001178899999999999999999999988
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=242.02 Aligned_cols=245 Identities=17% Similarity=0.207 Sum_probs=188.7
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCC--CCCChhHHHHHHHHhccCCCCCCcceeeeeeeC------Ccc
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKV--AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~~ 141 (508)
+|.-+..+|.|.- .|.-+. .-.++.||+|++... .....++-.+|..++..+.|+||++++.++.-. ...
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 3455667788876 455554 335788999987532 233456788999999999999999999998644 356
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|+|||+|. .+|.+.+. -.++-..+..|+.|++.|+.|||+.| |+||||||+||++..+..+||.|||+++....
T Consensus 97 y~v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HHHHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCc
Confidence 99999995 88998884 45777889999999999999999999 99999999999999999999999999986655
Q ss_pred C---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh--hhh-----------------------
Q 010529 222 G---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL--DMI----------------------- 273 (508)
Q Consensus 222 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~----------------------- 273 (508)
. +.++.|..|.|||++.+..+.+..||||+||++.||++|+..|++... ++.
T Consensus 171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 4 456778899999999988899999999999999999999987765310 000
Q ss_pred --------hccchhhhhccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 274 --------RGENLNLLMDSHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 274 --------~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
....+...+...... +.+...+..+.+++.+||..||++|.|+.++|.|
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000111111111100 0111235567889999999999999999999988
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=235.32 Aligned_cols=207 Identities=28% Similarity=0.378 Sum_probs=182.3
Q ss_pred CCCCcccEEEEEEEcC-CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHH
Q 010529 78 SGEKAANVVYKGRLEN-RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAK 155 (508)
Q Consensus 78 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~ 155 (508)
||.|++|.||++...+ ++.++||++...... ....+.+|+..++.+.|++|+++++++......+++||++.|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 5899999999999654 888999999765432 24679999999999999999999999998889999999999999999
Q ss_pred HhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCccccCCC----CccccCCC
Q 010529 156 HLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMKNSMDG----KSYSTNLA 230 (508)
Q Consensus 156 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~~~~~----~~~~~t~~ 230 (508)
++... ...+++..+..++.+++++|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 98532 146899999999999999999999999 999999999999998 899999999998766543 33456788
Q ss_pred CCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccC
Q 010529 231 YTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYE 309 (508)
Q Consensus 231 y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 309 (508)
|++||.+... .++.++|+|+||+++++| ..+.+++..|+..+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999776 778899999999999999 56889999999999
Q ss_pred CCCCCChHHHHHHH
Q 010529 310 PRERPSTKNLVVTL 323 (508)
Q Consensus 310 p~~Rps~~~il~~L 323 (508)
|.+||++.++++++
T Consensus 202 p~~R~~~~~l~~~~ 215 (215)
T cd00180 202 PEKRPSAKEILEHL 215 (215)
T ss_pred cccCcCHHHHhhCC
Confidence 99999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-32 Score=259.53 Aligned_cols=200 Identities=17% Similarity=0.177 Sum_probs=173.2
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCC--------ChhHHHHHHHHhccCC---CCCCcce
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWP--------DPTQFKEEAEGVGKLR---RKRLANL 131 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~nIv~~ 131 (508)
....+|++|..++.+|.|+||.|++|.++. ...|+||.+.+...- ..-.+-.|+.||..|+ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 345678999999999999999999999654 667899988654321 1224667999999996 9999999
Q ss_pred eeeeeeCCcceeeeec-CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEE
Q 010529 132 IGYCCAGDERLLVAEY-MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210 (508)
Q Consensus 132 ~~~~~~~~~~~lv~E~-~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl 210 (508)
+++|.+++.+||+||- -+|-+|.+++. -+..+++.++.-|+.||+-|+++||+.| |||||||-+||.++.+|-+||
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEE
Confidence 9999999999999996 45678999996 4567999999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCC--CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCC
Q 010529 211 SCFGLMKNSMDG--KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPP 266 (508)
Q Consensus 211 ~Dfg~a~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~ 266 (508)
+|||.+.....+ ..++||..|.|||++.|.+| ...-|||++|++||.++....|++
T Consensus 712 idfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999998766555 56899999999999998887 457899999999999998887754
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=230.25 Aligned_cols=194 Identities=25% Similarity=0.258 Sum_probs=169.2
Q ss_pred ccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 72 DNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
|.+...||.|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+++++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 3456788999999999999655 888999999866544 56789999999999999999999999988889999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----Cc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----KS 224 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~~ 224 (508)
+++|.+++..... .+++..+..++.+++.+|.+||..+ ++|+||+|.||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 9999999864221 2889999999999999999999999 999999999999999999999999998866554 34
Q ss_pred cccCCCCCCcccc-ccCCcCccccchhhHHHHHHHHhCCCCCCc
Q 010529 225 YSTNLAYTPPEYL-KNGRVIPESVIYSFGTVLLDLLSGKHIPPS 267 (508)
Q Consensus 225 ~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 267 (508)
..++..|++||.+ ....++.++|||+||+++++|++|+.|+..
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 5677889999998 566778899999999999999999987643
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=236.44 Aligned_cols=245 Identities=22% Similarity=0.320 Sum_probs=189.9
Q ss_pred CcccccccCCCCcccEEEEEE-Ec---CCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LE---NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
..|..+.+||.|.|++||++. .. .++.||+|.+.... ...++..|+++|..+ .+.||+++.+++..++...+|
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv 113 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV 113 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence 346778899999999999999 33 57889999997655 446799999999999 799999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEcccCCcccc----
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNS---- 219 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~---- 219 (508)
+||++.....+++. .++..++..++..++.||.++|.+| ||||||||+|+|.+ ..+.-.|+|||+|...
T Consensus 114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence 99999988888885 3678899999999999999999999 99999999999997 4567899999998610
Q ss_pred -------------CC--C-----------------------------CccccCCCCCCcccccc-CCcCccccchhhHHH
Q 010529 220 -------------MD--G-----------------------------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTV 254 (508)
Q Consensus 220 -------------~~--~-----------------------------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~v 254 (508)
.. + -...||++|.|||++.. ...+.+.||||.||+
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 00 0 01247899999999875 456889999999999
Q ss_pred HHHHHhCCCCCCchhhh---------hh-----------hcc-------c----------hhhh-hccccC-------CC
Q 010529 255 LLDLLSGKHIPPSHALD---------MI-----------RGE-------N----------LNLL-MDSHLE-------GK 289 (508)
Q Consensus 255 l~elltg~~~~~~~~~~---------~~-----------~~~-------~----------~~~~-~~~~~~-------~~ 289 (508)
++.+++++.||.....+ .+ .+. . +..+ ...... ..
T Consensus 268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence 99999999887532100 00 000 0 0000 000000 00
Q ss_pred -CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 -FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 -~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.....+..+.+|+.+|+..||.+|.|++++|+|
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 001124478899999999999999999999987
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=222.06 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=202.2
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCC--CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKV--AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+++.+++-+|.....|+.|+|+|.++. +++|++... .....++|..|.-.|+.+.||||+.++|.|....++.+|..
T Consensus 189 ~~~lnl~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 189 VSSLNLITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence 445566777888899999999998776 555666433 22235689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceee-cCCCcceeeCCCCCeEEcccCCccccCCCCcc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~-Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 225 (508)
||+.|||+..++....-.++..++.+++.+|++|+.|||+..+++-| .+.+..|++|++.+++|+ .+-.+........
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr 346 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGR 346 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeecccc
Confidence 99999999999877777788999999999999999999999878877 899999999999888775 2223333333333
Q ss_pred ccCCCCCCccccccCCc---CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRV---IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~---~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
.-.|.||+||.++..+- -..+|+|||++++|||.|...||... ..+ +--..+.-+.++..+|+..+..+..|+
T Consensus 347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl-spm---ecgmkialeglrv~ippgis~hm~klm 422 (448)
T KOG0195|consen 347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL-SPM---ECGMKIALEGLRVHIPPGISRHMNKLM 422 (448)
T ss_pred ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC-Cch---hhhhhhhhccccccCCCCccHHHHHHH
Confidence 45789999999976543 34799999999999999999876432 111 111223334566677888899999999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhh
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.-|+..||.+||.+..|+-.|+++.
T Consensus 423 ~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 423 NICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHhcCCCCcCCCcceehhhHHHhc
Confidence 9999999999999999999998764
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-29 Score=270.07 Aligned_cols=193 Identities=17% Similarity=0.148 Sum_probs=141.1
Q ss_pred cCCC-CCCcceeeee-------eeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceee
Q 010529 122 KLRR-KRLANLIGYC-------CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193 (508)
Q Consensus 122 ~l~h-~nIv~~~~~~-------~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~ 193 (508)
.++| +||++++++| .+...++++||++ +++|.++|.. ....+++.++..|+.||++||.|||+++ |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5788888877 2334577889988 5799999963 3456999999999999999999999999 9999
Q ss_pred cCCCcceeeCC-------------------CCCeEEcccCCccccCC--------------------CCccccCCCCCCc
Q 010529 194 DLNAYRVLFDE-------------------DGDPRLSCFGLMKNSMD--------------------GKSYSTNLAYTPP 234 (508)
Q Consensus 194 Dikp~Nill~~-------------------~~~~kl~Dfg~a~~~~~--------------------~~~~~~t~~y~aP 234 (508)
||||+||||+. ++.+|++|||+++.... .....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 45567777777653211 0113468889999
Q ss_pred cccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010529 235 EYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERP 314 (508)
Q Consensus 235 E~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp 314 (508)
|++.+..++.++|||||||+||||++|..|+..... . +..+..... +............++.+||..+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-T-----MSSLRHRVL-PPQILLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-H-----HHHHHHhhc-ChhhhhcCHHHHHHHHHhCCCChhhCc
Confidence 999999999999999999999999998765332110 0 001100011 111111234567888999999999999
Q ss_pred ChHHHHHHHH
Q 010529 315 STKNLVVTLA 324 (508)
Q Consensus 315 s~~~il~~L~ 324 (508)
|+.+++++-.
T Consensus 258 s~~eil~h~~ 267 (793)
T PLN00181 258 SMSELLQSEF 267 (793)
T ss_pred ChHHHhhchh
Confidence 9999998754
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=214.92 Aligned_cols=247 Identities=17% Similarity=0.170 Sum_probs=182.2
Q ss_pred CcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeee-eeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGY-CCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~-~~~~~~~~lv~E 146 (508)
+.|.+.+.+|.|.||.+-+++++. .+.+++|-+.... ....+|.+|...--.| .|.||+.-+++ |...+.+++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 356788899999999999999654 6778899886443 3467899998876666 68999988875 555677889999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee-C-CCCCeEEcccCCccccCCCCc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF-D-EDGDPRLSCFGLMKNSMDGKS 224 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill-~-~~~~~kl~Dfg~a~~~~~~~~ 224 (508)
|++.|+|.+-+ ....+.+.....++.|+++||.|+|+++ +||||||.+|||+ + +.-++||||||..+.....-.
T Consensus 103 ~aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~ 178 (378)
T KOG1345|consen 103 FAPRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVK 178 (378)
T ss_pred cCccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceeh
Confidence 99999999888 4567888899999999999999999999 9999999999998 3 445799999999876544322
Q ss_pred c-ccCCCCCCcccccc---C--CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC---HHHH
Q 010529 225 Y-STNLAYTPPEYLKN---G--RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS---SEEA 295 (508)
Q Consensus 225 ~-~~t~~y~aPE~~~~---~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 295 (508)
. .-+..|.+||.... + ...+.+|||.||++++..+||..|+..........-.+.. +........| ...+
T Consensus 179 ~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~-w~~rk~~~~P~~F~~fs 257 (378)
T KOG1345|consen 179 YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ-WLKRKNPALPKKFNPFS 257 (378)
T ss_pred hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH-HhcccCccCchhhcccC
Confidence 2 23567999997653 2 3577899999999999999999765422111000000111 1111111112 2345
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+..+..+-|..+|++|--..++.+.
T Consensus 258 ~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 258 EKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred HHHHHHHHHhcCCcccccchhHHHHHH
Confidence 668888899999999999655555554
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=210.22 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=126.8
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccccCCC
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA 230 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~ 230 (508)
|||.+++.. .+..+++.+++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++....... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999964 3557999999999999999999999987 999999999999999 99987655433 368899
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC-----CCCHHHHH--HHHHHHH
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG-----KFSSEEAT--QVVGLAS 303 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~l~~l~~ 303 (508)
|+|||++.+..++.++|||||||++|||+||+.|+...... ......+....... ..+..... .+.+++.
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 146 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL---SAILEILLNGMPADDPRDRSNLESVSAARSFADFMR 146 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---cHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHH
Confidence 99999999999999999999999999999999876432110 00011111110000 11222333 6999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHhh
Q 010529 304 QCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+||..+|.+|||+.++++++..+.
T Consensus 147 ~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 147 VCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHhcccccccCHHHHHHHHHHHH
Confidence 999999999999999999988764
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-26 Score=219.76 Aligned_cols=257 Identities=16% Similarity=0.121 Sum_probs=197.6
Q ss_pred cccccccCCCCcccEEEEEEEcCC--CEEEEEEecCCCCCChhHHHHHHHHhccCCC----CCCcceeeee-eeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLENR--QWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR----KRLANLIGYC-CAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~~~~~~-~~~~~~~l 143 (508)
.|.+.+.||.|+||.||+|..... ..+|+|............+..|+.++..+.. +++..+++.+ ..+...+|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 789999999999999999995543 4788888876543333378899999999863 6899999998 47778899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-----CCeEEcccCCcc-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-----GDPRLSCFGLMK- 217 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-----~~~kl~Dfg~a~- 217 (508)
||+.+ |.+|.++......+.++..+++.|+.|++.+|++||+.| ++||||||.|+++... ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99998 899999886555678999999999999999999999999 9999999999999755 358999999998
Q ss_pred -ccCC------------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc
Q 010529 218 -NSMD------------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS 284 (508)
Q Consensus 218 -~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~ 284 (508)
.... .....||..|+++....+...+++.|+||++.++.+++.|..|+.... .......+......
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~-~~~~~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE-MTDLKSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc-ccchHHHHHHHhhh
Confidence 3211 112458999999999999999999999999999999999996643211 10011111111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
..........+..+..+...+-..+...+|....+...|.......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111122234556777777777799999999999999988876554
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=198.95 Aligned_cols=256 Identities=14% Similarity=0.131 Sum_probs=202.5
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
..|.++++||.|+||.+|.|. ..+|..||||+-.... ...++..|.++.+.|+ ...|+.+..+..+...-.|||+.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 468999999999999999999 7889999999876544 3457889999999995 47889999999888899999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccccCC---
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNSMD--- 221 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~~~--- 221 (508)
+ |.||+++..- ....++..+++-++-|++.-++|+|.++ +|||||||+|+|..- ...+.|+|||+|+...+
T Consensus 93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 8 8999997743 5678999999999999999999999999 999999999999963 34689999999986543
Q ss_pred --------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC---CC
Q 010529 222 --------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG---KF 290 (508)
Q Consensus 222 --------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 290 (508)
.....||..|.+-....+...+.+.|+-|+|.||..+.-|..||.+ ..........+.+......- ..
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg-lka~tk~QKyEkI~EkK~s~~ie~L 248 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG-LKAATKKQKYEKISEKKMSTPIEVL 248 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc-cchhhHHHHHHHHHHhhcCCCHHHH
Confidence 2445789999998888777888899999999999999999866543 32222222233332222211 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
....|.++.-.+..|-..--++-|+..-+-+.+..+-....
T Consensus 249 C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 249 CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 22346778888899999999999999888887766655443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=202.66 Aligned_cols=252 Identities=14% Similarity=0.157 Sum_probs=199.1
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.|++.++||.|+||.++.|+ +-+++.||||.-...+ ...++..|.+..+.| ..++|+.++.+..++-+-.||||++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 35788999999999999999 7789999999765433 346788899999888 6799999999998888889999998
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-----CCeEEcccCCccccCCC-
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-----GDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-----~~~kl~Dfg~a~~~~~~- 222 (508)
|.||+++. +..+..|+..+++.|+.|++.-++|+|++. +|+|||||+|+||..- ..+.++|||+|+...+.
T Consensus 107 -GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 107 -GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred -CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 89999865 668889999999999999999999999999 9999999999999643 35899999999865443
Q ss_pred ----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc---CCC
Q 010529 223 ----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL---EGK 289 (508)
Q Consensus 223 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 289 (508)
.+..||..||+-....|..-+.+.|+-|||-|+...|-|..||.+- .........+.+-+... ...
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL-KA~tnK~kYeKIGe~Kr~T~i~~ 262 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL-KADTNKEKYEKIGETKRSTPIEV 262 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc-cCcchHHHHHHhccccccCCHHH
Confidence 4567999999999999999999999999999999999999775442 11111111111111110 111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+....+.++..-+.-.-..+-.+-|..+-+...+..+..
T Consensus 263 Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 263 LCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 122346778887877788888999999888777665543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=216.04 Aligned_cols=157 Identities=13% Similarity=0.009 Sum_probs=123.1
Q ss_pred CcccccccCCCCcccEEEEEEEc--CCCEEEEEEecCCCC-----CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE--NRQWIAVKKFTKVAW-----PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..|.+.+.||+|+||.||+|... +++.||||++..... .....|.+|+++|++++|+||+..+.. .+..|
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~ 94 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG 94 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence 34678888999999999999854 578789998753311 124569999999999999999864432 24679
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecC-CCcceeeCCCCCeEEcccCCccccCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL-NAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Di-kp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|||||++|++|.. +. ... ...++.+++++|.|||+.| |+|||| ||+|||++.++.+||+|||+++....
T Consensus 95 LVmE~~~G~~L~~-~~--~~~------~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 95 LVRGWTEGVPLHL-AR--PHG------DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEEccCCCCHHH-hC--ccc------hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999999963 21 111 1467899999999999999 999999 99999999999999999999985543
Q ss_pred C------------CccccCCCCCCcccccc
Q 010529 222 G------------KSYSTNLAYTPPEYLKN 239 (508)
Q Consensus 222 ~------------~~~~~t~~y~aPE~~~~ 239 (508)
. ....+++.|+|||.+..
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 2 12346778999999863
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=199.68 Aligned_cols=247 Identities=22% Similarity=0.256 Sum_probs=191.6
Q ss_pred ccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCC-CCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRK-RLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~-nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|.+...||.|+||.||++... ..+++|.+....... ...+.+|+.++..+.|+ +|+++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566778899999999999976 678999987654433 56799999999999888 799999999777778999999
Q ss_pred CCCCCHHHHhhccCC-CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCCC---
Q 010529 148 MPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~~--- 222 (508)
+.+++|.+++..... ..++......++.|++.++.|+|..+ ++|||+||+||+++..+ .++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977753211 26889999999999999999999999 99999999999999888 6999999998744332
Q ss_pred -------CccccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc----CC
Q 010529 223 -------KSYSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL----EG 288 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 288 (508)
....++..|++||.+.+ ..++...|+||+|++++++++|..|+...... .........+.... ..
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-SATSQTLKIILELPTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-ccHHHHHHHHHhcCCccccc
Confidence 45578999999999987 57788999999999999999999774332210 00000111111111 11
Q ss_pred CCCH----HHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 289 KFSS----EEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 289 ~~~~----~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.... .....+.+++..|+..+|..|.+..+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111 123568899999999999999998888776
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=187.27 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=110.0
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC---------hhHH-----------------HHHHHHhccCCCCCC
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD---------PTQF-----------------KEEAEGVGKLRRKRL 128 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------~~~~-----------------~~E~~~l~~l~h~nI 128 (508)
.+.||.|++|.||+|...+|+.||||+++...... ..+| ..|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46789999999999997789999999997543211 1122 349999999988877
Q ss_pred cceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHH-HhCCCceeecCCCcceeeCCCCC
Q 010529 129 ANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYC-NTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 129 v~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~l-H~~~~iiH~Dikp~Nill~~~~~ 207 (508)
.....+.. ...+|||||++|++|..... ....++...+..++.|++.+|.++ |+.| |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCc
Confidence 54333322 23489999999877765432 345789999999999999999999 6888 99999999999998 478
Q ss_pred eEEcccCCccccC
Q 010529 208 PRLSCFGLMKNSM 220 (508)
Q Consensus 208 ~kl~Dfg~a~~~~ 220 (508)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-24 Score=190.68 Aligned_cols=169 Identities=13% Similarity=0.065 Sum_probs=131.6
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhH---------HHHHHHHhccCCCCCCcceeeeeeeC--
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQ---------FKEEAEGVGKLRRKRLANLIGYCCAG-- 138 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~nIv~~~~~~~~~-- 138 (508)
..|++++.+|.|+||.||++.. ++..+|||.+.......... +.+|+..+.++.|++|..+..++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 3578899999999999999766 45579999997655433322 68999999999999999999886533
Q ss_pred ------CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcc
Q 010529 139 ------DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212 (508)
Q Consensus 139 ------~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 212 (508)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|..| ++|||+||+||+++.+| ++|+|
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEE
Confidence 35789999999999988642 222 24569999999999999 99999999999999988 99999
Q ss_pred cCCccccCCCCccccCCCCCCccccccCCcCccccchhhHHHHHHHH
Q 010529 213 FGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLL 259 (508)
Q Consensus 213 fg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ell 259 (508)
||............ .+.....+..++|+||||+++.-+.
T Consensus 178 fg~~~~~~e~~a~d--------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 178 LSGKRCTAQRKAKD--------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCcccccchhhHH--------HHHHHhHhcccccccceeEeehHHH
Confidence 99876553322110 0233445667999999999987553
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-24 Score=221.88 Aligned_cols=248 Identities=14% Similarity=0.062 Sum_probs=182.3
Q ss_pred ccccCCCCcccEEEEEE-EcCCCEEEEEEecCC--CCCCh----hHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKV--AWPDP----TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~----~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
....+|.|++|.|+.+. ......++.|.+... ..... ..+..|.-+-..+.|||++..+..+.+....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 34567999999888777 333444555544311 11111 126667777888999999988888777666666699
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
||++ +|..++. ....++..++..++.|++.|+.|+|+.| +.|||+|++|++++.+|.+||+|||.+..+...
T Consensus 402 ~~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 402 YCPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred cccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 9998 9999996 3357889999999999999999999999 999999999999999999999999988755432
Q ss_pred ----CccccCCCCCCccccccCCcCc-cccchhhHHHHHHHHhCCCCCCchhhhhhh---ccchhhhhccccCCCCCHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIP-ESVIYSFGTVLLDLLSGKHIPPSHALDMIR---GENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~-~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 294 (508)
....|+..|+|||++.+..|++ ..||||.|+++..|++|+.||......... .......-...-...+....
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 557 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL 557 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence 3456889999999999999977 689999999999999998765321110000 00000000000001122445
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.....+|.++|+.||.+|.|+.+|++.=|-
T Consensus 558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 558 PRETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred hhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence 7778899999999999999999999987443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=180.03 Aligned_cols=142 Identities=16% Similarity=0.153 Sum_probs=112.7
Q ss_pred ccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--------------------------hhHHHHHHHHhccCCCCC
Q 010529 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--------------------------PTQFKEEAEGVGKLRRKR 127 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 127 (508)
+.+.||.|++|.||+|...+|+.||||+++...... ...+..|...+.++.|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 357789999999999997789999999997653210 112457899999999998
Q ss_pred CcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCC
Q 010529 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 128 Iv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~ 206 (508)
|.....+... ..+|||||++|+++..... ....++......++.|++.+|.++|+ .| |+||||||+|||++ ++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CC
Confidence 8555444332 3489999999876543322 33567888999999999999999999 88 99999999999998 88
Q ss_pred CeEEcccCCccccCC
Q 010529 207 DPRLSCFGLMKNSMD 221 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~~ 221 (508)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-22 Score=178.51 Aligned_cols=112 Identities=16% Similarity=0.255 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 010529 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYM 473 (508)
Q Consensus 394 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 473 (508)
+....++.++.+|+.+++.++|++|+++|++||+++|. |+.+|.|||.+|.++|+|+.|++||+.||.+||.+.++|-+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 45567899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 474 QSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 474 ~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
+|.+|+.+|+|++|++.|++||++||.|..+++
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~ 187 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYKS 187 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHHH
Confidence 999999999999999999999999999987654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-21 Score=171.15 Aligned_cols=180 Identities=15% Similarity=0.103 Sum_probs=137.2
Q ss_pred ccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC----hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecC
Q 010529 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD----PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+...|++|+||+||.+.. .+..++.+.+.....-. ...+.+|+++|++| .|++|++++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 445679999999997776 56667777765443211 12588999999999 45889999886 3468999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecC-CCcceeeCCCCCeEEcccCCccccCCCCc---
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL-NAYRVLFDEDGDPRLSCFGLMKNSMDGKS--- 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Di-kp~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 224 (508)
.|.+|.+.+. . ....++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++........
T Consensus 81 ~G~~L~~~~~---~------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP---R------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh---h------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999876441 1 11357889999999999999 999999 79999999999999999999985554321
Q ss_pred --------------cccCCCCCCccccccC-CcC-ccccchhhHHHHHHHHhCCCCCCch
Q 010529 225 --------------YSTNLAYTPPEYLKNG-RVI-PESVIYSFGTVLLDLLSGKHIPPSH 268 (508)
Q Consensus 225 --------------~~~t~~y~aPE~~~~~-~~~-~~~Dv~slG~vl~elltg~~~~~~~ 268 (508)
...++.|+.|+...-. ..+ ...+.++.|.-+|.++|++.+.+++
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 0136778888754321 233 4678889999999999999886654
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-22 Score=209.22 Aligned_cols=239 Identities=18% Similarity=0.202 Sum_probs=180.4
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCC-CCChhHHHHHHHH--hccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVA-WPDPTQFKEEAEG--VGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++...+.||++.|=.|.+|+.+.|. |+||++-+.. .-..+.|.+.++- ...++|||++++..+-......|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5566788999999999999998887 8999986654 3334445444443 4445999999999887777888999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+. -+|++.|. ...-+...+..-|+.|++.||.-+|..| |.|||||.+|||++.-+.+.|+||-..+...-..
T Consensus 103 vk-hnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 103 VK-HNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred Hh-hhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 95 78999995 4555777888889999999999999999 9999999999999999999999998765432211
Q ss_pred -------ccccCCCCCCccccccC----------C-cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch-----hh
Q 010529 224 -------SYSTNLAYTPPEYLKNG----------R-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL-----NL 280 (508)
Q Consensus 224 -------~~~~t~~y~aPE~~~~~----------~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-----~~ 280 (508)
+...-..|+|||.+... . .+++-||||+|||+.||++-..|++. ..+++..... ..
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-LSQL~aYr~~~~~~~e~ 257 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-LSQLLAYRSGNADDPEQ 257 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-HHHHHhHhccCccCHHH
Confidence 11123569999987531 2 67889999999999999997655432 2232322211 11
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
++..+ . ...+..++..|++.||..|.++++.|+.-
T Consensus 258 ~Le~I-e-------d~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 258 LLEKI-E-------DVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHhC-c-------CccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 22111 1 23588999999999999999999999884
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.3e-23 Score=201.29 Aligned_cols=224 Identities=20% Similarity=0.228 Sum_probs=184.6
Q ss_pred CCCCcccEEEEEEE----cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeeeecCCC
Q 010529 78 SGEKAANVVYKGRL----ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 78 lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
+|.|+||.|++++. +.|..+|+|++++..... ......|..++..++ ||.+|++...+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 69999999999872 337788999886543221 224566778888885 99999999999999999999999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccccCCC
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA 230 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~ 230 (508)
|.|...+. ....++......+...++-+++++|..+ ++|||+|++||+++.+|++++.|||+++.....+..+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99988875 4456777777788889999999999999 99999999999999999999999999998887777799999
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEP 310 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p 310 (508)
|||||++. .....+|.||||++.+||+||..||..+ ....++.. ....|...+..+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~--------~~~~Il~~--~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD--------TMKRILKA--ELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH--------HHHHHhhh--ccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999997 5677999999999999999999886542 12222221 224567778889999999999999
Q ss_pred CCCCCh
Q 010529 311 RERPST 316 (508)
Q Consensus 311 ~~Rps~ 316 (508)
..|--.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999533
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=171.88 Aligned_cols=133 Identities=14% Similarity=0.074 Sum_probs=104.9
Q ss_pred ccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-----CCCCCcceeeeeeeCC---cce-eeee
Q 010529 76 SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-----RRKRLANLIGYCCAGD---ERL-LVAE 146 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~~~~~~~~---~~~-lv~E 146 (508)
..||+|+||.||. ...++. .+||++........+.+.+|+.+++.+ .||||++++|++.++. ..+ +|||
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 4679999999996 323344 479988765444567899999999999 5799999999998763 333 7899
Q ss_pred c--CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHH-HHHHhCCCceeecCCCcceeeCC----CCCeEEcccCCc
Q 010529 147 Y--MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEAL-DYCNTEGRPLYHDLNAYRVLFDE----DGDPRLSCFGLM 216 (508)
Q Consensus 147 ~--~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L-~~lH~~~~iiH~Dikp~Nill~~----~~~~kl~Dfg~a 216 (508)
| +.+++|.+++.+ ..+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+-+
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 9 567999999953 345555 35678888888 9999999 999999999999973 347999995433
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-21 Score=189.96 Aligned_cols=208 Identities=21% Similarity=0.289 Sum_probs=162.6
Q ss_pred hccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCc-eeecCCCc
Q 010529 120 VGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP-LYHDLNAY 198 (508)
Q Consensus 120 l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~i-iH~Dikp~ 198 (508)
|+.+.|.|+.+++|.+.+++..++|.+||..|+|.+.+.. ....+++.-...++.+|+.||.|||+.. | .|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999965 5678999999999999999999999987 5 89999999
Q ss_pred ceeeCCCCCeEEcccCCccccCC------CCccccCCCCCCccccccC-------CcCccccchhhHHHHHHHHhCCCCC
Q 010529 199 RVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPEYLKNG-------RVIPESVIYSFGTVLLDLLSGKHIP 265 (508)
Q Consensus 199 Nill~~~~~~kl~Dfg~a~~~~~------~~~~~~t~~y~aPE~~~~~-------~~~~~~Dv~slG~vl~elltg~~~~ 265 (508)
|+++|....+||+|||+...... .........|.|||.+++. ..+.++||||||++++|+++.+.|+
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 99999999999999999876642 1122234669999999763 1466799999999999999999887
Q ss_pred Cchhhhhhhccchhhhhc---cccCCCCC-H-HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 266 PSHALDMIRGENLNLLMD---SHLEGKFS-S-EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
..........+.+..+.. ...++... . ...+.+..++..||..+|..||++..|-..++.+...
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 653222111111111111 11122111 1 3345789999999999999999999999998887653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-21 Score=177.85 Aligned_cols=228 Identities=18% Similarity=0.175 Sum_probs=145.6
Q ss_pred ccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCC----------CCCcceeeeee---
Q 010529 74 IVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRR----------KRLANLIGYCC--- 136 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h----------~nIv~~~~~~~--- 136 (508)
..+.||.|+++.||.++. .+++.+|||++...... ..+++.+|.-....+.+ -.++-.++...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 345679999999999995 55999999998644321 24567777655555432 12322222221
Q ss_pred ------eC---C-----cceeeeecCCCCCHHHHhhc---cCC--CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCC
Q 010529 137 ------AG---D-----ERLLVAEYMPNDTLAKHLFH---WEK--QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197 (508)
Q Consensus 137 ------~~---~-----~~~lv~E~~~~~sL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp 197 (508)
.. . ..+++|+-+. ++|.+++.- ... ..+....++.+..|+++.+++||+.| ++|+||+|
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~ 173 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKP 173 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SG
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEecccce
Confidence 11 1 2367888874 788877531 111 23445556777899999999999999 99999999
Q ss_pred cceeeCCCCCeEEcccCCccccCCCCc-cccCCCCCCcccccc--------CCcCccccchhhHHHHHHHHhCCCCCCch
Q 010529 198 YRVLFDEDGDPRLSCFGLMKNSMDGKS-YSTNLAYTPPEYLKN--------GRVIPESVIYSFGTVLLDLLSGKHIPPSH 268 (508)
Q Consensus 198 ~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~~Dv~slG~vl~elltg~~~~~~~ 268 (508)
+|++++.+|.++|+||+.......... ...+..|.+||.... -.++.+.|.|+||+++|.|+++..|+...
T Consensus 174 ~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 174 ENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp GGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred eeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence 999999999999999987665444322 344577999997643 24788999999999999999999876432
Q ss_pred hhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010529 269 ALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRER 313 (508)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R 313 (508)
..... .......+. +.++.+..||..+|+.||.+|
T Consensus 254 ~~~~~---------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 254 SPEAD---------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGGST---------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred Ccccc---------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 11110 110122344 788999999999999999988
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-20 Score=172.65 Aligned_cols=191 Identities=14% Similarity=0.112 Sum_probs=142.7
Q ss_pred CCCCCcceeeeeee---------------------------CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHH
Q 010529 124 RRKRLANLIGYCCA---------------------------GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY 176 (508)
Q Consensus 124 ~h~nIv~~~~~~~~---------------------------~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ 176 (508)
.|||||+++++|.+ +..+|+||...+ .+|.+++ .....+.....-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl---~~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYL---WTRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHH---hcCCCchHHHHHHHHH
Confidence 69999999988653 224689998875 7899999 4456777788889999
Q ss_pred HHHHHHHHHhCCCceeecCCCcceee--CCCCC--eEEcccCCccccCC----------CCccccCCCCCCccccccC--
Q 010529 177 IAEALDYCNTEGRPLYHDLNAYRVLF--DEDGD--PRLSCFGLMKNSMD----------GKSYSTNLAYTPPEYLKNG-- 240 (508)
Q Consensus 177 i~~~L~~lH~~~~iiH~Dikp~Nill--~~~~~--~kl~Dfg~a~~~~~----------~~~~~~t~~y~aPE~~~~~-- 240 (508)
+++|+.|||.+| |.|||+|++|||+ |+|+. +.|+|||++--... .-...|...-||||+....
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999998 45554 78999998642221 1123467779999998642
Q ss_pred C----cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 010529 241 R----VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPST 316 (508)
Q Consensus 241 ~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 316 (508)
+ .-.++|.|+.|.+.||+++...||+....-...... ..+...+..+..+++.+.+++...|+.||.+|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~----Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT----YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh----hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 1 234899999999999999999998763221122221 12222344566778889999999999999999887
Q ss_pred HHHHHHH
Q 010529 317 KNLVVTL 323 (508)
Q Consensus 317 ~~il~~L 323 (508)
.-....|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 6655544
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=191.68 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=150.3
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC---CCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR---RKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|.|-+.||.|+||.||+|...+|+.||+|+-+.... -+|.--.+++.+|+ -+.|..+...+.-.+..+||+||
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 3456678899999999999987799999998765431 23333344555555 23455555555556777899999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-------CCCCeEEcccCCcc---
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-------EDGDPRLSCFGLMK--- 217 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-------~~~~~kl~Dfg~a~--- 217 (508)
.+.|||-+++. ....++|..+..++.|+++.+++||..+ |||+||||+|+||. +...++|+|||.+.
T Consensus 776 ~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 776 SPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred cccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999999986 6678999999999999999999999999 99999999999993 23458999999875
Q ss_pred ccCCCCcc---ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCC
Q 010529 218 NSMDGKSY---STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKH 263 (508)
Q Consensus 218 ~~~~~~~~---~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~ 263 (508)
.+.++..+ .+|-.+-.+|+..|.+++..+|.|.|+.+++.||.|+-
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 33444333 46788999999999999999999999999999999974
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=163.53 Aligned_cols=134 Identities=16% Similarity=0.181 Sum_probs=113.0
Q ss_pred ccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--------hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 76 SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.||+|++|.||+|.+ .|..|+||+........ ...+.+|+.++..+.|++|+....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999997 55668999875433221 13578899999999999998888787777888999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
++|++|.+++... .. .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988531 12 78899999999999999999 99999999999999 78899999998764
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=166.68 Aligned_cols=142 Identities=18% Similarity=0.129 Sum_probs=112.1
Q ss_pred cccccccCCCCcccEEEEEE--EcCCCEEEEEEecCCCCCC------------------------hhHHHHHHHHhccCC
Q 010529 71 SDNIVSESGEKAANVVYKGR--LENRQWIAVKKFTKVAWPD------------------------PTQFKEEAEGVGKLR 124 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~ 124 (508)
.|.+.+.||.|++|.||+|. ..+|+.||||+++...... ...+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999998 5679999999987543110 023568999999996
Q ss_pred C--CCCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee
Q 010529 125 R--KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202 (508)
Q Consensus 125 h--~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill 202 (508)
+ ..+++++++ ...+|||||+.|.+|..... ....+.......++.||+.+|.+||..+.++|+||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 5 334455543 23589999999988876542 234466667789999999999999999879999999999999
Q ss_pred CCCCCeEEcccCCcccc
Q 010529 203 DEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 203 ~~~~~~kl~Dfg~a~~~ 219 (508)
+ ++.++|+|||.+...
T Consensus 183 ~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 183 H-DGKVVIIDVSQSVEL 198 (237)
T ss_pred E-CCCEEEEEChhhhcc
Confidence 9 889999999987743
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-20 Score=180.35 Aligned_cols=171 Identities=23% Similarity=0.318 Sum_probs=128.1
Q ss_pred CcceeeeecCCCCCHHHHhhcc-CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 139 DERLLVAEYMPNDTLAKHLFHW-EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
..+||.|++|.-.+|.+||.+. .....++.....++.|++.|+.| ++ .+|+|+||.||++..+..+||.|||+..
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhhee
Confidence 3578999999999999999633 34567888999999999999999 77 9999999999999999999999999976
Q ss_pred ccCCC----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC
Q 010529 218 NSMDG----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 218 ~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
..... +...||..||+||.+.+..|+.++||||||++|+|+++--.- .. ........+-+..+.
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T---~~---er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFST---QF---ERIATLTDIRDGIIP 478 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhcc---HH---HHHHhhhhhhcCCCC
Confidence 44332 345789999999999999999999999999999999982111 00 111111122222221
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHH
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLV 320 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il 320 (508)
+.+..+. +.-..|+.+++...|.+||++.+..
T Consensus 479 ~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 479 PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hHHhhcC-cHHHHHHHHhcCCCcccCchHHHHh
Confidence 1122222 2345788999999999999555543
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=157.02 Aligned_cols=129 Identities=18% Similarity=0.230 Sum_probs=105.7
Q ss_pred CCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--------hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 78 SGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
||+|++|.||+|.+ ++..|++|......... ..++.+|++++..+.|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999996 45669999865432211 2457789999999998876666656666777899999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
|++|.+++.. . .. .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~--~-~~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE--G-ND------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh--c-HH------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988742 1 11 78999999999999999 99999999999999 88999999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-19 Score=185.35 Aligned_cols=201 Identities=19% Similarity=0.163 Sum_probs=140.6
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
+++.|+.|..|+||.||.++++ +.+.+|+ ++++++ -+.+- ++.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCccee--------------------
Confidence 4466788899999999999965 4777888 443332 11111 22222333333
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC--------
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-------- 221 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~-------- 221 (508)
|+-...++ ..+.++... +.+++|||+.+ |+|||+||+|.+|+.-|++|+.|||+++....
T Consensus 136 -gDc~tllk--~~g~lPvdm--------vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLK--NIGPLPVDM--------VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhcc--cCCCCcchh--------hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 33333343 223344322 77899999999 99999999999999999999999999764321
Q ss_pred -----------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC
Q 010529 222 -----------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290 (508)
Q Consensus 222 -----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
.+..+||+.|+|||++....|....|.|++|+++||.+-|..||+++.-+.+.+.-+.. .+...+-
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd---~i~wpE~ 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD---DIEWPEE 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh---hcccccc
Confidence 12347899999999999899999999999999999999999998776322222211111 1111222
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERP 314 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rp 314 (508)
....++++.+++.++|+.+|..|-
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhc
Confidence 334567799999999999999993
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-18 Score=156.26 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=108.5
Q ss_pred ccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC----------------------ChhHHHHHHHHhccCCCCC--
Q 010529 72 DNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP----------------------DPTQFKEEAEGVGKLRRKR-- 127 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~n-- 127 (508)
|.+.+.||.|+||.||++...+|+.||||++...... ....+..|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5667889999999999999888999999987643210 0123677889999887774
Q ss_pred CcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 128 LANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 128 Iv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
++.+++. ...++||||++|++|..... ......++.+++.++.++|+.+ ++|+||||+||+++.++.
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 4455442 34589999999999876542 1345678899999999999999 999999999999999999
Q ss_pred eEEcccCCccccCC
Q 010529 208 PRLSCFGLMKNSMD 221 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~ 221 (508)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-18 Score=177.79 Aligned_cols=133 Identities=22% Similarity=0.227 Sum_probs=109.1
Q ss_pred cccccCCCCcccEEEEEEEcCCCEEEEEE-ecCC-CCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 73 NIVSESGEKAANVVYKGRLENRQWIAVKK-FTKV-AWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~-~~~~-~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
...+.||+|+||.||+|.+.+.. +++|+ +... ... ..+.+.+|++++..++|++|+....++......++|
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 414 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV 414 (535)
T ss_pred CccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence 34577899999999999976655 34443 2221 111 124688999999999999999888888777788999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
|||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++.
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999884 35678999999999999999 9999999999999 678999999999874
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-17 Score=142.30 Aligned_cols=134 Identities=14% Similarity=0.026 Sum_probs=112.8
Q ss_pred ccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCC--CCCcceeeeeeeCCcceeeeecCCCC
Q 010529 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR--KRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
+++.||.|.++.||++...+ ..++||....... ...+..|+.++..++| .+++++++++...+..+++|||+.|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35678999999999999765 5699999865442 4579999999999976 58999999988778899999999987
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC---CCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE---GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
++..+ +......++.+++.+|.++|.. + ++|+|++|.||+++..+.++++|||.+....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 76543 5566777899999999999985 5 9999999999999998999999999887433
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.6e-17 Score=148.99 Aligned_cols=133 Identities=17% Similarity=0.099 Sum_probs=102.6
Q ss_pred cCC-CCcccEEEEEEEcCCCEEEEEEecCCC-------------CCChhHHHHHHHHhccCCCCCC--cceeeeeeeCCc
Q 010529 77 ESG-EKAANVVYKGRLENRQWIAVKKFTKVA-------------WPDPTQFKEEAEGVGKLRRKRL--ANLIGYCCAGDE 140 (508)
Q Consensus 77 ~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~nI--v~~~~~~~~~~~ 140 (508)
.|| .|+.|+||.+... +..++||.+.... ......+.+|+.++..|.|++| +..+++......
T Consensus 38 ~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred eeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 346 7888899999875 4558888874311 0123468899999999988775 677776544322
Q ss_pred ----ceeeeecCCC-CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 141 ----RLLVAEYMPN-DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 141 ----~~lv~E~~~~-~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
.++|||+++| .+|.+++. ...++.. .+.+|+.+|.+||+.| |+|+||||.|||++.++.++|+|||.
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQ---EAPLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHh---cCCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCC
Confidence 2599999997 68998884 3345543 3578999999999999 99999999999999888999999998
Q ss_pred ccc
Q 010529 216 MKN 218 (508)
Q Consensus 216 a~~ 218 (508)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 874
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.8e-17 Score=143.97 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=98.1
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHH----------------------HHHHHHhccCCCC--CC
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQF----------------------KEEAEGVGKLRRK--RL 128 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~----------------------~~E~~~l~~l~h~--nI 128 (508)
.+.||+|+||.||+|...+++.||||++....... ...+ ..|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999997789999999987543211 1111 3455666665433 34
Q ss_pred cceeeeeeeCCcceeeeecCCCCCHHH-HhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCC
Q 010529 129 ANLIGYCCAGDERLLVAEYMPNDTLAK-HLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 129 v~~~~~~~~~~~~~lv~E~~~~~sL~~-~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~ 206 (508)
++++++ ...++||||++|+++.. .+.. .... ..+..++.+++.++.++|. .+ ++|+||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CC
Confidence 455443 24689999999854321 1111 0111 6678899999999999999 88 99999999999999 89
Q ss_pred CeEEcccCCccccC
Q 010529 207 DPRLSCFGLMKNSM 220 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~ 220 (508)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999986443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-18 Score=177.26 Aligned_cols=253 Identities=17% Similarity=0.148 Sum_probs=189.9
Q ss_pred cccccccCCCCcccEEEEEEEc--CCCEEEEEEecCCC--CCChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE--NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.|.+++.||.|+|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++.+++...+....++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4566677899999999988843 35556777665443 112334555777777886 999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHH-hCCCceeecCCCcceeeCCCC-CeEEcccCCccccCC-C
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN-TEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMD-G 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH-~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~-~ 222 (508)
+|..|+++.+.+........+....-.++.|+..++.|+| ..+ +.|+||||+|.+++..+ .++++|||+|..... .
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 9999999998883222225677788889999999999999 888 99999999999999999 999999999986665 2
Q ss_pred ------Ccccc-CCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCH
Q 010529 223 ------KSYST-NLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSS 292 (508)
Q Consensus 223 ------~~~~~-t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 292 (508)
....| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+....... .......... .......
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 256 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLPWN 256 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCccc
Confidence 23457 9999999999874 34678999999999999999997754322111 1111111111 0112233
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.......+++.+++..+|..|.+.+++...-+...
T Consensus 257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 257 SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cCChhhhhcccccccCCchhccccccccccccccc
Confidence 45666888999999999999999999887744433
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=154.20 Aligned_cols=105 Identities=23% Similarity=0.366 Sum_probs=101.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+.+.+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.++|++..|++|++++|+++|++.++|++.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+.+|++|++.|++|+++||.+...
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~e~ 462 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNAEA 462 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 99999999999999999999998764
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-16 Score=132.69 Aligned_cols=114 Identities=15% Similarity=0.244 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc----ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH
Q 010529 393 TQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV----SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP 468 (508)
Q Consensus 393 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 468 (508)
.+.+.++..++..|+.+|..|+|++|...|..||++.|.- .+.+|.|||.|+++++.++.||.+|.+||+|+|.+.
T Consensus 89 ~k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~ 168 (271)
T KOG4234|consen 89 DKAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYE 168 (271)
T ss_pred HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhH
Confidence 3445678899999999999999999999999999999972 346899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
+|+.++|.+|.++.+|++|+.+|.+.++++|.+..+.+
T Consensus 169 kAl~RRAeayek~ek~eealeDyKki~E~dPs~~ear~ 206 (271)
T KOG4234|consen 169 KALERRAEAYEKMEKYEEALEDYKKILESDPSRREARE 206 (271)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHH
Confidence 99999999999999999999999999999999875543
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=130.14 Aligned_cols=106 Identities=11% Similarity=0.053 Sum_probs=100.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|+|++|++.|++++.++|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++|.++
T Consensus 24 p~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l 102 (144)
T PRK15359 24 PETVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL 102 (144)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 334667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+|++++|+..|++|++++|.+...+
T Consensus 103 ~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 103 KMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999986554
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.5e-16 Score=152.19 Aligned_cols=108 Identities=24% Similarity=0.361 Sum_probs=102.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+.++..+||.+|..|+|+.|+.+|++||.++|. |+..|.||+.||..+|+|++|++|..++++++|+|+++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 356788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccccC
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGARA 507 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 507 (508)
..+|+|++|+..|.++|+.+|.|+-...|
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L~~g 109 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQLKTG 109 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHHHHh
Confidence 99999999999999999999999765433
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-15 Score=137.52 Aligned_cols=116 Identities=25% Similarity=0.241 Sum_probs=106.2
Q ss_pred chhhhhhHHH-HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCC
Q 010529 387 LSFQEWTQQM-RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHP 465 (508)
Q Consensus 387 l~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 465 (508)
++.+.+.+++ ..+.++..+|+.+|++|+|++||+||+++|.++|. |++.+.|||.+|+++++|..|..||+.|+.+|-
T Consensus 84 L~vd~I~~~LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~ 162 (536)
T KOG4648|consen 84 LPVDPIAQQLLKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDK 162 (536)
T ss_pred CCccHHHHHHHHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhH
Confidence 3444444444 45667899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 466 DWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 466 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.+.+||-++|.+-..+|+..||-++++.+|+|+|++..
T Consensus 163 ~Y~KAYSRR~~AR~~Lg~~~EAKkD~E~vL~LEP~~~E 200 (536)
T KOG4648|consen 163 LYVKAYSRRMQARESLGNNMEAKKDCETVLALEPKNIE 200 (536)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhHHHHHhhCcccHH
Confidence 99999999999999999999999999999999999754
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.1e-15 Score=144.80 Aligned_cols=104 Identities=27% Similarity=0.349 Sum_probs=100.0
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
.++..+|..++..|+|++|++.|++||+++|. ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|+|++|+.+|++|++++|.+...
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~ 106 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRF 106 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999998654
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-14 Score=120.17 Aligned_cols=100 Identities=14% Similarity=0.032 Sum_probs=96.9
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
+.+..+..|..++..|++++|...|+..+.++|. ++..|+++|.|+..+|+|++||..|.+|+.++|+++.++++.|.|
T Consensus 34 ~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~c 112 (157)
T PRK15363 34 PLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAEC 112 (157)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 4667899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCc
Q 010529 478 LSKLDMQKDAADMLLEGAALE 498 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~ 498 (508)
++.+|+.++|.+.|+.|+...
T Consensus 113 ~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 113 YLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999876
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-15 Score=148.71 Aligned_cols=241 Identities=21% Similarity=0.209 Sum_probs=180.5
Q ss_pred cccccCCC--CcccEEEEEEE---cCCCEEEEEEec--CCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 73 NIVSESGE--KAANVVYKGRL---ENRQWIAVKKFT--KVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 73 ~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+.+.+|. |.+|.||.+.. .++..+|+|+-+ .........=.+|+...+++ .|+|.++.+..+...+..++-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 45677899 99999999986 347789999843 23323444556777777777 799999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHH----HHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCcccc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE----ALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNS 219 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~----~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~ 219 (508)
+|+| +.+|.++... ....++....+.+..+... ||.++|+.. ++|-|+||.||+...+ ...+++|||+...+
T Consensus 197 tE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEc
Confidence 9999 5788887753 3345788889999999999 999999999 9999999999999988 78999999998766
Q ss_pred CCCC---------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC
Q 010529 220 MDGK---------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290 (508)
Q Consensus 220 ~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
..+. ...+...|++||... +-++...|||++|.|+.+..++..++.......+. ++-...+..++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----~~r~~~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----QLRQGYIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----ccccccCchhh
Confidence 6543 114567799999985 56788999999999999999997765332111111 11010111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
....+..+...+..++..+|-.|++...++.+
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 22223445558889999999999998877655
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=146.80 Aligned_cols=139 Identities=19% Similarity=0.169 Sum_probs=98.3
Q ss_pred ccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--------------------------h--------------hHHHH
Q 010529 76 SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--------------------------P--------------TQFKE 115 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~--------------~~~~~ 115 (508)
..||.|++|.||+|++.+|+.||||+.++..... . -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 4689999999999999999999999986542110 0 02455
Q ss_pred HHHHhccC----CCCCCcceeeeee-eCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHH-HHHHHHhCCC
Q 010529 116 EAEGVGKL----RRKRLANLIGYCC-AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE-ALDYCNTEGR 189 (508)
Q Consensus 116 E~~~l~~l----~h~nIv~~~~~~~-~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~-~L~~lH~~~~ 189 (508)
|+..+.++ +|.+-+.+-.++. ..+..+|||||++|++|.++.... .... ....++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~---~~~~ia~~~~~~~l~ql~~~g- 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EAGL---DRKALAENLARSFLNQVLRDG- 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hcCC---CHHHHHHHHHHHHHHHHHhCC-
Confidence 66555555 2222222222222 234578999999999998876421 1112 23456666666 478899999
Q ss_pred ceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 190 iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
++|+|++|.||+++.++.++|+|||++...
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999997644
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-14 Score=136.60 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc--------------ChHHHhhHHHHHHhhCCHHHHHHHHHH
Q 010529 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV--------------SPTVYARRSLCHLFSDRSDAALLDAMQ 459 (508)
Q Consensus 394 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~ 459 (508)
+.+..+...+..|+.+|+.|+|..|...|++|+..-... ...+++|+|.||+++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 466778889999999999999999999999998654421 225699999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 460 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|+++|++.+|+|++|.+|..+|+|+.|+.+|++|++++|.|+.+
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~ 327 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAA 327 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHH
Confidence 999999999999999999999999999999999999999999654
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.8e-14 Score=134.64 Aligned_cols=97 Identities=23% Similarity=0.344 Sum_probs=93.3
Q ss_pred HHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 396 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...+..++++||.+|..|+|++||.+|++||++.|+ .+.+|.||+.||..+|+|++-++++.+||+++|++++|+++++
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 455888999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHH
Q 010529 476 VALSKLDMQKDAADMLLE 493 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~ 493 (508)
.++..+|+.++|+.+..-
T Consensus 191 ~A~E~lg~~~eal~D~tv 208 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVTV 208 (606)
T ss_pred HHHHhhccHHHHHHhhhH
Confidence 999999999999998764
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-14 Score=132.36 Aligned_cols=197 Identities=17% Similarity=0.230 Sum_probs=139.2
Q ss_pred HhccCCCCCCcceeeeeeeC-----CcceeeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCC-Cc
Q 010529 119 GVGKLRRKRLANLIGYCCAG-----DERLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEG-RP 190 (508)
Q Consensus 119 ~l~~l~h~nIv~~~~~~~~~-----~~~~lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~i 190 (508)
.|-.+-|.|||+++.|+.+. ....++.|||..|+|.++|++. ....+......+|+.||+.||.|||+.. +|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34455799999999998654 3468999999999999999754 3346778888999999999999999987 57
Q ss_pred eeecCCCcceeeCCCCCeEEcccCCcc--ccC------CCCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCC
Q 010529 191 LYHDLNAYRVLFDEDGDPRLSCFGLMK--NSM------DGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK 262 (508)
Q Consensus 191 iH~Dikp~Nill~~~~~~kl~Dfg~a~--~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~ 262 (508)
+|+++...-|++..+|-+|++---... ... ......+.++|.+||.-.....+..+|||+||+..++|..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 899999999999999988885311110 000 011224568899999877677788999999999999998887
Q ss_pred CCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 263 HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.-+............+...+-.. .-..=.+++.+|+...|..||++.+++-|.
T Consensus 280 iq~tnseS~~~~ee~ia~~i~~l--------en~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 280 IQSTNSESKVEVEENIANVIIGL--------ENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eccCCCcceeehhhhhhhheeec--------cCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 43221111111111111111000 001123577899999999999999999874
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=131.02 Aligned_cols=103 Identities=16% Similarity=-0.028 Sum_probs=99.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+..+|..+...|++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+|+++|.++
T Consensus 64 a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 142 (296)
T PRK11189 64 AQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGIAL 142 (296)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 455789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+..|++++|+++|+++++++|++.
T Consensus 143 ~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 143 YYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999875
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-13 Score=135.44 Aligned_cols=130 Identities=18% Similarity=0.199 Sum_probs=110.9
Q ss_pred ccchHHHHHHHHHhhcCCCcccccchhhhhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHH
Q 010529 363 RMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSL 442 (508)
Q Consensus 363 ~~d~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~ 442 (508)
......+.+.|-...+...... +++-..-.|..++..|+|++|++||+.||..+|. +..+|+.+|.
T Consensus 407 ~~~l~~i~~~fLeaa~~~~~~~-------------DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGA 472 (579)
T KOG1125|consen 407 SSHLAHIQELFLEAARQLPTKI-------------DPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGA 472 (579)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-------------ChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhH
Confidence 3345566666666544443311 1223456899999999999999999999999999 9999999999
Q ss_pred HHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 443 CHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 443 ~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
.+.+..+.++||..|++|++|.|+++.++||+|.+|+.+|.|+||+++|-.||.+.+++....+
T Consensus 473 tLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS~mNlG~ykEA~~hlL~AL~mq~ks~~~~~ 536 (579)
T KOG1125|consen 473 TLANGNRSEEAISAYNRALQLQPGYVRVRYNLGISCMNLGAYKEAVKHLLEALSMQRKSRNHNK 536 (579)
T ss_pred HhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhhhhhhhhHHHHHHHHHHHHHhhhccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999655443
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.48 E-value=4e-13 Score=113.55 Aligned_cols=106 Identities=10% Similarity=0.146 Sum_probs=101.2
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
+.......|..++..|++++|++.|++++..+|. ++.+|.++|.++..+|++++|+..++++++++|+++..++.+|.+
T Consensus 16 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~ 94 (135)
T TIGR02552 16 QLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAEC 94 (135)
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 3556788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+..+|++++|++.|+++++++|.+...
T Consensus 95 ~~~~g~~~~A~~~~~~al~~~p~~~~~ 121 (135)
T TIGR02552 95 LLALGEPESALKALDLAIEICGENPEY 121 (135)
T ss_pred HHHcCCHHHHHHHHHHHHHhccccchH
Confidence 999999999999999999999998763
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.7e-13 Score=132.50 Aligned_cols=169 Identities=15% Similarity=0.166 Sum_probs=129.7
Q ss_pred EEE-EE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCC
Q 010529 86 VYK-GR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ 163 (508)
Q Consensus 86 Vy~-~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~ 163 (508)
+|. |. ..++.+|.|...+...........+-++.|+.++||||++++..+...+..|||+|-+ ..|..++..
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~---- 100 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE---- 100 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH----
Confidence 443 44 5567889998887666533456778889999999999999999999999999999998 468887853
Q ss_pred CcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----ccccCCCCCCcccccc
Q 010529 164 TIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----SYSTNLAYTPPEYLKN 239 (508)
Q Consensus 164 ~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~~t~~y~aPE~~~~ 239 (508)
++.....-.+.||+.||.|||+.+.++|++|....|+|+..|..||++|-++....... ....--.|..|+.+..
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 33556666789999999999977669999999999999999999999998765433222 1122234666665432
Q ss_pred CCcCccccchhhHHHHHHHHhCCC
Q 010529 240 GRVIPESVIYSFGTVLLDLLSGKH 263 (508)
Q Consensus 240 ~~~~~~~Dv~slG~vl~elltg~~ 263 (508)
.. -..|.|-||++++|++.|..
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCccc
Confidence 21 34699999999999999943
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-13 Score=127.82 Aligned_cols=135 Identities=15% Similarity=0.222 Sum_probs=112.6
Q ss_pred ccchHHHHHHHHHhhcCCCcccccchhhhhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc---ChHHHhh
Q 010529 363 RMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV---SPTVYAR 439 (508)
Q Consensus 363 ~~d~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~ 439 (508)
..+..-..+.|+.....+++..... ...........+...|+.+|+.|+|..|.++|++||.++|.. ++..|.|
T Consensus 216 ~~~~~ka~~hf~qal~ldpdh~~sk---~~~~~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~n 292 (486)
T KOG0550|consen 216 NDNADKAINHFQQALRLDPDHQKSK---SASMMPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGN 292 (486)
T ss_pred ccchHHHHHHHhhhhccChhhhhHH---hHhhhHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHH
Confidence 3344445555565555555544322 333444567888999999999999999999999999999983 5678999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 440 RSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 440 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
||.++..+|+.++||.+++.|++|||...+|+.++|.|+..+++|++|+++|++|++++-.
T Consensus 293 ra~v~~rLgrl~eaisdc~~Al~iD~syikall~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 293 RALVNIRLGRLREAISDCNEALKIDSSYIKALLRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred hHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999987654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-13 Score=119.75 Aligned_cols=128 Identities=17% Similarity=0.105 Sum_probs=96.0
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCC-cceeeeeeeCCcceeeeecCCCCCH
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRL-ANLIGYCCAGDERLLVAEYMPNDTL 153 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~~~~~~~~~~~lv~E~~~~~sL 153 (508)
++.++.|.++.||+++.. +..|++|....... ....+..|+.++..+.+.++ ++++.+. ....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 356788999999999975 55699998754432 22357889999999865554 4555543 3345899999999887
Q ss_pred HHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCC----ceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 154 AKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGR----PLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 154 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~----iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
...- . ....++.+++++|..||..+. ++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 5420 1 113456889999999999871 39999999999999 6689999999876
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-13 Score=134.30 Aligned_cols=106 Identities=9% Similarity=-0.007 Sum_probs=95.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+....+.|..+.++|++++|+.+|++||.+.|. .+++|.|+|..|-.+|+..+|+.+|.+||.++|.+++|+.|+|.+|
T Consensus 388 aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~ 466 (966)
T KOG4626|consen 388 AAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIY 466 (966)
T ss_pred hhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHh
Confidence 566778888888999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
...|+..+|++.|++||+++|+...++
T Consensus 467 kDsGni~~AI~sY~~aLklkPDfpdA~ 493 (966)
T KOG4626|consen 467 KDSGNIPEAIQSYRTALKLKPDFPDAY 493 (966)
T ss_pred hccCCcHHHHHHHHHHHccCCCCchhh
Confidence 999999999999999999999877654
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=133.35 Aligned_cols=106 Identities=9% Similarity=0.014 Sum_probs=102.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
++.+.+.|+++...|.+++|...|.+|++..|. .+.+++|+|.+|.++|++++|+..|+.||.++|++++||.|+|++|
T Consensus 354 adam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmGnt~ 432 (966)
T KOG4626|consen 354 ADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMGNTY 432 (966)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcchHH
Confidence 677899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+|+.++|+++|.+||.++|.-..++
T Consensus 433 ke~g~v~~A~q~y~rAI~~nPt~AeAh 459 (966)
T KOG4626|consen 433 KEMGDVSAAIQCYTRAIQINPTFAEAH 459 (966)
T ss_pred HHhhhHHHHHHHHHHHHhcCcHHHHHH
Confidence 999999999999999999999876654
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.4e-14 Score=143.75 Aligned_cols=143 Identities=15% Similarity=0.086 Sum_probs=94.3
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCC--------------------------C--------h---
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWP--------------------------D--------P--- 110 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~--------~--- 110 (508)
|+.+.. ..||.|++|.||+|++++ |+.||||++++.... + .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 455555 678999999999999877 999999999754210 0 0
Q ss_pred ---hHHHHHHHHhccCC----CCCCcceeeeeee-CCcceeeeecCCCCCHHHHhhccCCC----CcChHHHHHHHHHHH
Q 010529 111 ---TQFKEEAEGVGKLR----RKRLANLIGYCCA-GDERLLVAEYMPNDTLAKHLFHWEKQ----TIEWPLRLRVAFYIA 178 (508)
Q Consensus 111 ---~~~~~E~~~l~~l~----h~nIv~~~~~~~~-~~~~~lv~E~~~~~sL~~~l~~~~~~----~l~~~~~~~i~~~i~ 178 (508)
-+|.+|+..+.++. +.+.+.+-.++.+ ....+|||||+.|++|.++-.-...+ .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 12455555555542 3333333333322 35678999999999998742110111 23333333344444
Q ss_pred HHHHHHHhCCCceeecCCCcceeeCCCC----CeEEcccCCccccC
Q 010529 179 EALDYCNTEGRPLYHDLNAYRVLFDEDG----DPRLSCFGLMKNSM 220 (508)
Q Consensus 179 ~~L~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~Dfg~a~~~~ 220 (508)
+..| ++|+|+||.||+++.+| +++++|||++....
T Consensus 277 ------f~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 3578 99999999999999888 99999999987543
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.4e-12 Score=114.50 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=98.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHH-HhhCC--HHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCH-LFSDR--SDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~--~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...+...|..+...|++++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|++.++++++++|++..+++.+|
T Consensus 73 ~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~LA 151 (198)
T PRK10370 73 SEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALMLLA 151 (198)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHHHH
Confidence 677899999999999999999999999999999 999999999985 67788 59999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.+++.+|+|++|+.+|+++++++|.+..
T Consensus 152 ~~~~~~g~~~~Ai~~~~~aL~l~~~~~~ 179 (198)
T PRK10370 152 SDAFMQADYAQAIELWQKVLDLNSPRVN 179 (198)
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 9999999999999999999999998653
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.2e-13 Score=99.47 Aligned_cols=67 Identities=15% Similarity=0.126 Sum_probs=63.6
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHhcCcc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLD-MQKDAADMLLEGAALEE 499 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~a~~~~p 499 (508)
++.+|+++|.+++.+|+|++|+.+|++|++++|+++.+|+++|.++..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 68899999999999999999999999999999999999999999999999 79999999999999998
|
... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-13 Score=136.10 Aligned_cols=246 Identities=14% Similarity=0.070 Sum_probs=179.1
Q ss_pred CcccccccCCCCcccEEEEEEE--cCCCEEEEEEecCCCCCChh--HHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL--ENRQWIAVKKFTKVAWPDPT--QFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
.++..+..||.|.|+.|+.+.. .++..+++|.+......... .-..|+-+...+ .|.++++.+..|......|+-
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip 344 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP 344 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence 4456788899999999999884 46888999988665433322 223455555555 788999988888777888899
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCccccCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~~~- 222 (508)
-|||.++++...+. ....+.+..++++..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||+...+...
T Consensus 345 ~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~ 421 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS 421 (524)
T ss_pred hhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceec
Confidence 99999998876652 4556888889999999999999999999 9999999999999876 78899999998643222
Q ss_pred CccccCCCCC--CccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 KSYSTNLAYT--PPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 ~~~~~t~~y~--aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
........+. ++.......+..+.|+||||..+.+..++...++.. .....+... .....+ ....++..
T Consensus 422 ~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~i~~~-~~p~~~-~~~~~~q~ 492 (524)
T KOG0601|consen 422 GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLTIRSG-DTPNLP-GLKLQLQV 492 (524)
T ss_pred ccccccccccccchhhccccccccccccccccccccccccCcccCccc-------ccceeeecc-cccCCC-chHHhhhh
Confidence 1222233344 455555667788999999999999999998654321 111111111 111112 23367788
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+...+...++..||.+.++..+.....
T Consensus 493 ~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 493 LLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred hhhhhcCCccccchhhhhhcccchhhh
Confidence 888999999999999999887765543
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-12 Score=101.69 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc----HHH
Q 010529 395 QMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW----PTA 470 (508)
Q Consensus 395 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~a 470 (508)
+++.+.++..+|..+...|+.++|++.|.++|.+.|. ++.+|+|||.+|..+|+.++|+.|.++|+++.-.. -.+
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 4455777889999999999999999999999999999 99999999999999999999999999999998654 358
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 471 FYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 471 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
|..+|..|..+|+-++|..+|+.|.++..+..+
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~FAr 150 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSKFAR 150 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCHHHH
Confidence 999999999999999999999999888765443
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-12 Score=114.35 Aligned_cols=137 Identities=12% Similarity=0.150 Sum_probs=100.8
Q ss_pred cccCCCCcccEEEEEEEcC-------CCEEEEEEecCCCCC----------C------------hhHHH----HHHHHhc
Q 010529 75 VSESGEKAANVVYKGRLEN-------RQWIAVKKFTKVAWP----------D------------PTQFK----EEAEGVG 121 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~----------~------------~~~~~----~E~~~l~ 121 (508)
.+.||.|-=+.||.|...+ +..+|||+.+..... + ...+. +|.+.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999998543 478999988542210 0 11233 7999999
Q ss_pred cCC--CCCCcceeeeeeeCCcceeeeecCCCCCHH-HHhhccCCCCcChHHHHHHHHHHHHHHHHH-HhCCCceeecCCC
Q 010529 122 KLR--RKRLANLIGYCCAGDERLLVAEYMPNDTLA-KHLFHWEKQTIEWPLRLRVAFYIAEALDYC-NTEGRPLYHDLNA 197 (508)
Q Consensus 122 ~l~--h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~-~~l~~~~~~~l~~~~~~~i~~~i~~~L~~l-H~~~~iiH~Dikp 197 (508)
++. .-+++.++++ ..-+|||||+.+..+. ..++ ...++..+...+..+++.+|..+ |..+ +||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 983 4677788765 4568999999764332 1232 22355566778889999999999 7888 99999999
Q ss_pred cceeeCCCCCeEEcccCCccccC
Q 010529 198 YRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 198 ~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.|||++ ++.+.|+|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999887554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.39 E-value=9e-13 Score=115.06 Aligned_cols=98 Identities=27% Similarity=0.361 Sum_probs=94.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+..+|+.+|..++|..|+++|.+||.++|. .+..|.|||.||+++++++.+..|+.+|++++|+.++++|.+|.++
T Consensus 10 a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~~ 88 (284)
T KOG4642|consen 10 AEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQWL 88 (284)
T ss_pred HHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcC
Q 010529 479 SKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~ 497 (508)
.....|++|+..+.+|..+
T Consensus 89 l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 89 LQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HhhccccHHHHHHHHHHHH
Confidence 9999999999999999654
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-12 Score=119.68 Aligned_cols=107 Identities=19% Similarity=0.347 Sum_probs=99.1
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhc---CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINV---NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQ 474 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 474 (508)
.|..++.+||.+|+.++|..|+++|++.|+. ||+.++.+|+|||.|.+.+|+|..||.|+.+|+.++|++.+||++-
T Consensus 80 ~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R~ 159 (390)
T KOG0551|consen 80 QAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIRG 159 (390)
T ss_pred HHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhhh
Confidence 3677899999999999999999999999985 5666889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 475 SVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 475 g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|.|++.+.++++|+.+.+..++++-+++.+
T Consensus 160 Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~ 189 (390)
T KOG0551|consen 160 AKCLLELERFAEAVNWCEEGLQIDDEAKKA 189 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 999999999999999999999888776543
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.4e-12 Score=133.27 Aligned_cols=103 Identities=26% Similarity=0.381 Sum_probs=96.2
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+..++.+|+.++..|+|++|+..|+++|++.|. +..|+|+|.||..+|++++|+++|++||+++|++.++|+++|.
T Consensus 125 ~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a~ 202 (615)
T TIGR00990 125 KYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRAN 202 (615)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34678899999999999999999999999999997 6799999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+|..+|+|++|+.+|..++.+++.+
T Consensus 203 a~~~lg~~~eA~~~~~~~~~~~~~~ 227 (615)
T TIGR00990 203 AYDGLGKYADALLDLTASCIIDGFR 227 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999998887766543
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.9e-13 Score=128.72 Aligned_cols=107 Identities=27% Similarity=0.339 Sum_probs=102.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+..+++.++..++|+.|++.|.+||+++|+ ++.+|.+||.++++.++|.+|+.|+.+||+++|...++|+++|.++
T Consensus 4 a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a~ 82 (476)
T KOG0376|consen 4 AEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTAV 82 (476)
T ss_pred hhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHHH
Confidence 556788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
+.++++.+|+.+|++...+.|+.....|
T Consensus 83 m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 83 MALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 9999999999999999999999876654
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.9e-11 Score=104.22 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=97.3
Q ss_pred cCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--------hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 77 ESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+++|+=+.+|.+.+.+.. +++|.-.+..... ..+-.+|++++.++.--.|...+=+..+.....|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4688999999999875544 5556432222111 235778999999986555554444555677788999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
+|..|.+.+... ...++..|-.-+.-||..| |+|+||.++||++..++ +.++|||++..
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888532 2456777777888899999 99999999999998664 99999999873
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=113.71 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=108.9
Q ss_pred ccCCCCcccEEEEEEEcCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCC--CCCcceeeeeeeC---CcceeeeecCC
Q 010529 76 SESGEKAANVVYKGRLENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRR--KRLANLIGYCCAG---DERLLVAEYMP 149 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~nIv~~~~~~~~~---~~~~lv~E~~~ 149 (508)
..||.|..+.||++...+|..++||....... .....+..|++++..+.+ .++++++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45789999999999987767799998765432 134578999999999965 4567888887654 36689999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE------------------------------------------ 187 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~------------------------------------------ 187 (508)
|.+|.+.+. ...++......++.+++++|..||+.
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998877552 13567777888888888888888842
Q ss_pred -------------CCceeecCCCcceeeCC--CCCeEEcccCCccc
Q 010529 188 -------------GRPLYHDLNAYRVLFDE--DGDPRLSCFGLMKN 218 (508)
Q Consensus 188 -------------~~iiH~Dikp~Nill~~--~~~~kl~Dfg~a~~ 218 (508)
..++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 12689999999999988 56689999987763
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.7e-11 Score=107.03 Aligned_cols=96 Identities=10% Similarity=-0.045 Sum_probs=74.4
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
......|..++..|++..|...+++||+.||. +..+|..||.+|..+|+.+.|-+.|++|+.++|++++.++|.|..++
T Consensus 36 ~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FLC 114 (250)
T COG3063 36 KARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFLC 114 (250)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHHH
Confidence 34456677777778888888878888888887 77888888888888888888888888888888888777777777777
Q ss_pred HcCCHHHHHHHHHHHhc
Q 010529 480 KLDMQKDAADMLLEGAA 496 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~ 496 (508)
.+|+|++|.+.|++|+.
T Consensus 115 ~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 115 AQGRPEEAMQQFERALA 131 (250)
T ss_pred hCCChHHHHHHHHHHHh
Confidence 77777777777777773
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.8e-12 Score=114.06 Aligned_cols=106 Identities=19% Similarity=0.130 Sum_probs=101.3
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.++......|+.++..|.+..|+..|..|++.+|+ +..+++.||.+|+.+|+-..|+.|+.++|++.|++..|...+|.
T Consensus 36 advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg~ 114 (504)
T KOG0624|consen 36 ADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRGV 114 (504)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhch
Confidence 45677788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
+++++|++++|.++|++.|+.+|.|..
T Consensus 115 vllK~Gele~A~~DF~~vl~~~~s~~~ 141 (504)
T KOG0624|consen 115 VLLKQGELEQAEADFDQVLQHEPSNGL 141 (504)
T ss_pred hhhhcccHHHHHHHHHHHHhcCCCcch
Confidence 999999999999999999999997643
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.6e-11 Score=101.89 Aligned_cols=143 Identities=18% Similarity=0.154 Sum_probs=103.1
Q ss_pred ccccCCCCcccEEEEEEEcCCCEEEEEEecCCCC--C------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW--P------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.+..+-+|+-+.|+++.+.+. ..+||.--.... + ...+..+|+++|.++.--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~Ge-~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGE-AAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccCCc-eeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 355667899999999998554 455554211111 1 1346889999999986555554444555666677999
Q ss_pred ecCCC-CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC---CeEEcccCCccc
Q 010529 146 EYMPN-DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG---DPRLSCFGLMKN 218 (508)
Q Consensus 146 E~~~~-~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~Dfg~a~~ 218 (508)
||++| .++.+++........+......++..|-+.+.-||.++ +||+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 47888886544444444444788999999999999999 99999999999996544 358999999764
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.1e-12 Score=91.65 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=64.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhC-CHHHHHHHHHHHHHhCC
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSD-RSDAALLDAMQAQCAHP 465 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p 465 (508)
+..+...|..++..|+|++|+..|+++|+++|. ++.+|+++|.||..+| ++++|++++++|++++|
T Consensus 3 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 3 AEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 667899999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.9e-12 Score=132.17 Aligned_cols=237 Identities=16% Similarity=0.133 Sum_probs=166.6
Q ss_pred CcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+...+++-+-+|+++.++.+. -..|...+.|+..... ..+.+....+-.++-...||-+++..--+......+||+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 334555667789999999888 3345555555443221 112222333333333335566665555555567789999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---- 221 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~---- 221 (508)
+|..|++|...++. .+..+..-....+..+..+++|||... +.|+|++|.|+|...+|+.++.|||.......
T Consensus 884 ~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred HHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999999998863 345666666777888999999999998 89999999999999999999999984321100
Q ss_pred -------------------------------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhh
Q 010529 222 -------------------------------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHAL 270 (508)
Q Consensus 222 -------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~ 270 (508)
.....+|+.|.+||.+.+......+|.|++|++++|.++|.+|+...
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~-- 1038 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE-- 1038 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc--
Confidence 01234688999999999999999999999999999999999775432
Q ss_pred hhhhccchhhhhccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCChH
Q 010529 271 DMIRGENLNLLMDSHLEG-----KFSSEEATQVVGLASQCLQYEPRERPSTK 317 (508)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ 317 (508)
.-..+++..+.. ..+...+....+++...+..+|.+|..+.
T Consensus 1039 ------tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 ------TPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ------chhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 222223332222 22344567788999999999999997665
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.9e-11 Score=114.02 Aligned_cols=149 Identities=8% Similarity=-0.010 Sum_probs=118.3
Q ss_pred cchhhccccchHHHHHHHHHhhcCCCcc--cccchhhhhhHHHHHHHHHHHhhhHHhhhh-hHHHHHHHHHHHHhcCCCc
Q 010529 356 PLAEACSRMDLTAIHQILVMAHYRDDKE--THELSFQEWTQQMRDMLEARKQGDTAFRDK-DFKTAIDYYSQFINVNIMV 432 (508)
Q Consensus 356 p~~~~~s~~d~~~l~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~ 432 (508)
|+.......+..++...|.......... .-.++-+-+.........+..+|.++...| +++++++.++++++.+|+
T Consensus 26 ~~~~i~y~~~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk- 104 (320)
T PLN02789 26 PVVPIAYTPEFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK- 104 (320)
T ss_pred cccceeeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-
Confidence 3344444556666666666654433221 122222222223345678888999988888 689999999999999999
Q ss_pred ChHHHhhHHHHHHhhCCH--HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 433 SPTVYARRSLCHLFSDRS--DAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~--~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+..+|++|+.++.++|+. ++++..++++|+++|++..||+.+|.++..+|+|++|++++.++|++||.|..+|
T Consensus 105 nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW 179 (320)
T PLN02789 105 NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAW 179 (320)
T ss_pred chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHH
Confidence 999999999999999984 7899999999999999999999999999999999999999999999999998765
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.3e-11 Score=97.91 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=96.3
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC---hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc---HHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS---PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW---PTAFYM 473 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~ 473 (508)
..++..|..++..|++++|++.|.+++...|. + ..+++.+|.++...|++++|+..|++++..+|++ ..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 3 EAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 45688999999999999999999999999987 5 5789999999999999999999999999999885 678999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 474 QSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 474 ~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|.++..+|++++|+..|+++++..|++...
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 9999999999999999999999999987654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.5e-11 Score=114.05 Aligned_cols=216 Identities=16% Similarity=0.148 Sum_probs=157.9
Q ss_pred cccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeee----eCCcceeeeecCCC-CCHHH
Q 010529 82 AANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCC----AGDERLLVAEYMPN-DTLAK 155 (508)
Q Consensus 82 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~----~~~~~~lv~E~~~~-~sL~~ 155 (508)
...+.|+++ ..+|..|++|++.............-+++++++.|+|||++..++. .+..++||++|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346789999 5678999999995544444445567788999999999999999886 34567999999886 67877
Q ss_pred Hhhcc-------------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 156 HLFHW-------------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 156 ~l~~~-------------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+.... .+...++..+|.++.|+..||.++|+.| +.-+-|.+.+||++.+.+++|+..|+.......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 65432 1234678899999999999999999999 988999999999999999999887776655443
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
.. +-+.+ -.+-|.=.||.+++.|.||..-.+ ........ ....+....+.++.+++
T Consensus 447 ~~----------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~-------~~d~~~~s----~~~~I~~~yS~D~rn~v 502 (655)
T KOG3741|consen 447 PT----------EPLES---QQQNDLRDLGLLLLALATGTENSN-------RTDSTQSS----HLTRITTTYSTDLRNVV 502 (655)
T ss_pred CC----------cchhH---HhhhhHHHHHHHHHHHhhcccccc-------cccchHHH----HHHHhhhhhhHHHHHHH
Confidence 30 11111 125688899999999999963211 00001110 01122345677888999
Q ss_pred HHhcccCCCCCCChHHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L 323 (508)
.-....++++ -++.+++.++
T Consensus 503 ~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 503 EYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHhcCccc-ccHHHHHHHH
Confidence 9999989887 6888888774
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.2e-11 Score=92.49 Aligned_cols=98 Identities=19% Similarity=0.282 Sum_probs=94.0
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
+...|..++..|++++|+..|+++++..|. +..+++.+|.++...+++++|+..+++++.+.|.+..+++.+|.++...
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 567889999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCccc
Q 010529 482 DMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~ 500 (508)
|++++|...++++++++|.
T Consensus 82 ~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 82 GKYEEALEAYEKALELDPN 100 (100)
T ss_pred HhHHHHHHHHHHHHccCCC
Confidence 9999999999999998874
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.7e-12 Score=125.88 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=73.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...|...||.+--+++++.|+.+|++||++||. .+-+|.-+|.-+....++|.|...|+.||.++|.+..|||.+|.+|
T Consensus 421 PesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~vy 499 (638)
T KOG1126|consen 421 PESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGTVY 499 (638)
T ss_pred cHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhhhe
Confidence 456777777777777777777777777777777 6666666676666677777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHHHHHhcCccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.++++++.|.-.|++|++++|.|.
T Consensus 500 ~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 500 LKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred eccchhhHHHHHHHhhhcCCccch
Confidence 777777777777777777776653
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.3e-11 Score=126.76 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=58.8
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.+...|..+...|++++|+..|+++++++|. ++.+|+++|.+++.+|++++|+.+|+++++++|++..+|+++|.++..
T Consensus 367 ~~~~la~~~~~~g~~~eA~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~kal~l~P~~~~~~~~la~~~~~ 445 (615)
T TIGR00990 367 SYIKRASMNLELGDPDKAEEDFDKALKLNSE-DPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYK 445 (615)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCccCHHHHHHHHHHHHH
Confidence 3445555555555555555555555555555 555555555555555555555555555555555555555555555555
Q ss_pred cCCHHHHHHHHHHHhcCccccc
Q 010529 481 LDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+|++++|+..|+++++++|.+.
T Consensus 446 ~g~~~eA~~~~~~al~~~P~~~ 467 (615)
T TIGR00990 446 EGSIASSMATFRRCKKNFPEAP 467 (615)
T ss_pred CCCHHHHHHHHHHHHHhCCCCh
Confidence 5555555555555555555543
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-11 Score=94.13 Aligned_cols=82 Identities=17% Similarity=0.297 Sum_probs=74.5
Q ss_pred hhhHHHHHHHHHHHHhcCCCc-ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 010529 412 DKDFKTAIDYYSQFINVNIMV-SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADM 490 (508)
Q Consensus 412 ~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~ 490 (508)
.|+|+.|+..|+++++.+|.. +...++++|.||+++|+|++|+..+++ ++.+|.+...++.+|.|+..+|+|++|++.
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 589999999999999999962 467888899999999999999999999 999999999999999999999999999999
Q ss_pred HHHH
Q 010529 491 LLEG 494 (508)
Q Consensus 491 ~~~a 494 (508)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.1e-11 Score=103.73 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=97.0
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc--ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV--SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQ 474 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 474 (508)
..+..+...|..+...|++++|+..|++++++.|.. ...++.++|.++..+|++++|+..++++++++|++..++..+
T Consensus 33 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 112 (172)
T PRK02603 33 KEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALNNI 112 (172)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 446678999999999999999999999999987751 247899999999999999999999999999999999999999
Q ss_pred HHHHHHcCC--------------HHHHHHHHHHHhcCccccc
Q 010529 475 SVALSKLDM--------------QKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 475 g~~~~~~~~--------------~~~A~~~~~~a~~~~p~~~ 502 (508)
|.++..+|+ +++|++.++++++++|.|.
T Consensus 113 g~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 113 AVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 999999988 7899999999999999974
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=127.50 Aligned_cols=104 Identities=9% Similarity=-0.070 Sum_probs=99.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|.++.+.|++++|+..|+++++++|. ++.+++++|.++..+|++++|+..|++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
..+|++++|+.+|++|++++|++..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCch
Confidence 9999999999999999999998754
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=97.32 Aligned_cols=101 Identities=6% Similarity=-0.063 Sum_probs=96.3
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
..+..+..|..+|..|++++|...|+-.+.++|. ++..|..+|.|+..+|+|++|+..|..|..++++++...|..|.|
T Consensus 36 ~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agqC 114 (165)
T PRK15331 36 MMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQC 114 (165)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHHH
Confidence 3667789999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
|+.+|+.++|..+|..|++ .|+
T Consensus 115 ~l~l~~~~~A~~~f~~a~~-~~~ 136 (165)
T PRK15331 115 QLLMRKAAKARQCFELVNE-RTE 136 (165)
T ss_pred HHHhCCHHHHHHHHHHHHh-Ccc
Confidence 9999999999999999998 454
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.1e-11 Score=100.86 Aligned_cols=84 Identities=13% Similarity=0.020 Sum_probs=78.4
Q ss_pred HHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Q 010529 418 AIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 418 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~ 497 (508)
..+.|+++++++|. + ++++|.++...|++++|+..|++++.++|++..+|+.+|.++..+|++++|+..|++|+++
T Consensus 12 ~~~~~~~al~~~p~-~---~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l 87 (144)
T PRK15359 12 PEDILKQLLSVDPE-T---VYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALML 87 (144)
T ss_pred HHHHHHHHHHcCHH-H---HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 35679999999999 5 6679999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 010529 498 EEKRQRGA 505 (508)
Q Consensus 498 ~p~~~~~~ 505 (508)
+|.+...+
T Consensus 88 ~p~~~~a~ 95 (144)
T PRK15359 88 DASHPEPV 95 (144)
T ss_pred CCCCcHHH
Confidence 99987654
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-10 Score=101.79 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=94.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHh------------------cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFIN------------------VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 460 (508)
...+..+||.+|+.|+|.+|..+|..||- ++-. ...++.|.+.|++..|+|-++++.+...
T Consensus 178 v~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~-~tpLllNy~QC~L~~~e~yevleh~sei 256 (329)
T KOG0545|consen 178 VPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKM-ITPLLLNYCQCLLKKEEYYEVLEHCSEI 256 (329)
T ss_pred hHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHh-hhHHHHhHHHHHhhHHHHHHHHHHHHHH
Confidence 45678999999999999999999999972 3333 5568999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 461 l~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
|..+|.+.+|||++|.+....=+..+|.++|.++|+++|.-+
T Consensus 257 L~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpsla 298 (329)
T KOG0545|consen 257 LRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLA 298 (329)
T ss_pred HhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhH
Confidence 999999999999999999999999999999999999999744
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.3e-10 Score=99.45 Aligned_cols=105 Identities=18% Similarity=0.181 Sum_probs=91.8
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc--ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV--SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
.+..+...|..+...|+|++|+..|++++.+.|.. .+.+|+++|.+|..+|++++|+..|++|++++|....++.++|
T Consensus 34 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~la 113 (168)
T CHL00033 34 EAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNNMA 113 (168)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHH
Confidence 46677889999999999999999999999987651 2458999999999999999999999999999999999999999
Q ss_pred HHHH-------HcCCHH-------HHHHHHHHHhcCccccc
Q 010529 476 VALS-------KLDMQK-------DAADMLLEGAALEEKRQ 502 (508)
Q Consensus 476 ~~~~-------~~~~~~-------~A~~~~~~a~~~~p~~~ 502 (508)
.++. .+|+++ +|+..|++++.++|.+.
T Consensus 114 ~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~~ 154 (168)
T CHL00033 114 VICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGNY 154 (168)
T ss_pred HHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcccH
Confidence 9999 777776 66666677888898754
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.6e-11 Score=113.50 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=95.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+.-.|.-+|..|++-+|-..|+++|+++|. +...|..||.+|....+.++-+.+|++|..+||++++.||.+|.++
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 566777888899999999999999999999999 8888999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
+-+++|++|+.+|++|++|+|+|.-
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~~ 429 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENAY 429 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhhH
Confidence 9999999999999999999999864
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.3e-10 Score=119.88 Aligned_cols=88 Identities=15% Similarity=0.040 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010529 413 KDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLL 492 (508)
Q Consensus 413 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 492 (508)
+++++|+..+++|++++|. ++.+|..+|.++..+|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3455555555555555555 555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHhcCcccc
Q 010529 493 EGAALEEKR 501 (508)
Q Consensus 493 ~a~~~~p~~ 501 (508)
+|++++|.+
T Consensus 397 ~Al~l~P~~ 405 (553)
T PRK12370 397 ECLKLDPTR 405 (553)
T ss_pred HHHhcCCCC
Confidence 555555554
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.4e-11 Score=86.33 Aligned_cols=63 Identities=19% Similarity=0.163 Sum_probs=45.9
Q ss_pred hHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 439 RRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 439 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+|..++..|++++|++.|+++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|.|
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 467777777777777777777777777777777777777777777777777777777777765
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-10 Score=102.66 Aligned_cols=93 Identities=15% Similarity=0.126 Sum_probs=87.3
Q ss_pred hhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcCC--HHHH
Q 010529 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL-SKLDM--QKDA 487 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~~~~~--~~~A 487 (508)
..++.++++..++++++.+|. +..+|.++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 367889999999999999999 9999999999999999999999999999999999999999999986 67787 5999
Q ss_pred HHHHHHHhcCccccccc
Q 010529 488 ADMLLEGAALEEKRQRG 504 (508)
Q Consensus 488 ~~~~~~a~~~~p~~~~~ 504 (508)
++.|++|++++|++...
T Consensus 130 ~~~l~~al~~dP~~~~a 146 (198)
T PRK10370 130 REMIDKALALDANEVTA 146 (198)
T ss_pred HHHHHHHHHhCCCChhH
Confidence 99999999999998765
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.6e-11 Score=117.86 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=81.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
-.+|+-.|.++.+.++++.|.-.|++|++++|. +.++....|.++.++|+.++|+..|++|+.+||.++-.-|.+|.++
T Consensus 489 YnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~il 567 (638)
T KOG1126|consen 489 YNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRASIL 567 (638)
T ss_pred hHHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHHHH
Confidence 456777788888888888888888888888888 7788888888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHHHhcCccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+.+++|++|+..+++..++.|++.
T Consensus 568 ~~~~~~~eal~~LEeLk~~vP~es 591 (638)
T KOG1126|consen 568 FSLGRYVEALQELEELKELVPQES 591 (638)
T ss_pred HhhcchHHHHHHHHHHHHhCcchH
Confidence 888888888888887777777754
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.8e-10 Score=100.47 Aligned_cols=126 Identities=19% Similarity=0.165 Sum_probs=85.1
Q ss_pred EEEEEEEcCCCEEEEEEecCCCCCC--------------------------hhHHHHHHHHhccCCCC--CCcceeeeee
Q 010529 85 VVYKGRLENRQWIAVKKFTKVAWPD--------------------------PTQFKEEAEGVGKLRRK--RLANLIGYCC 136 (508)
Q Consensus 85 ~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~--nIv~~~~~~~ 136 (508)
.||.|...+|..+|||..+.....- .....+|.+.|.++..- ++++++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998889999999875432110 12367899999999654 577777553
Q ss_pred eCCcceeeeecCC--CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHH-HHhCCCceeecCCCcceeeCCCCCeEEccc
Q 010529 137 AGDERLLVAEYMP--NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDY-CNTEGRPLYHDLNAYRVLFDEDGDPRLSCF 213 (508)
Q Consensus 137 ~~~~~~lv~E~~~--~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~-lH~~~~iiH~Dikp~Nill~~~~~~kl~Df 213 (508)
.-+|||||+. |..+..+.. ..++......++.+++..+.. +|..| ++|+|+.+.|||++++ .+.|+||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEEEec
Confidence 4579999998 655544331 122245667788888886666 56888 9999999999999877 9999999
Q ss_pred CCccccC
Q 010529 214 GLMKNSM 220 (508)
Q Consensus 214 g~a~~~~ 220 (508)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9887554
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1e-09 Score=102.81 Aligned_cols=131 Identities=11% Similarity=0.072 Sum_probs=97.2
Q ss_pred EEEEEEEcCCCEEEEEEecCCCCC-----------ChhHHHHHHHHhccCCCC--CCcceeeeeee-----CCcceeeee
Q 010529 85 VVYKGRLENRQWIAVKKFTKVAWP-----------DPTQFKEEAEGVGKLRRK--RLANLIGYCCA-----GDERLLVAE 146 (508)
Q Consensus 85 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~--nIv~~~~~~~~-----~~~~~lv~E 146 (508)
.|+++.+ +|+.|.||........ ....+.+|...+.+|..- ..+.+++++.. ....+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667766 5567999976433211 112478999999888433 34455666543 224689999
Q ss_pred cCCCC-CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-------CCCeEEcccCCcc
Q 010529 147 YMPND-TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-------DGDPRLSCFGLMK 217 (508)
Q Consensus 147 ~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-------~~~~kl~Dfg~a~ 217 (508)
++++. +|.+++........+......++.+++..+.-||..| |+|+|++++|||++. ++.+.|+||+.+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99875 8999885433445666778899999999999999999 999999999999975 4678999999875
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.8e-10 Score=106.25 Aligned_cols=107 Identities=24% Similarity=0.297 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHH
Q 010529 393 TQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFY 472 (508)
Q Consensus 393 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 472 (508)
.+.+..+.+.+.++..++.+|++++|++.|+.||+++|. .+.+|.+||.+++++++...|++||..|++++|+.+..|-
T Consensus 108 ee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~yk 186 (377)
T KOG1308|consen 108 EEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGYK 186 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCcccccccc
Confidence 334456778888999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 473 MQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 473 ~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
-+|.+...+|+|++|..+|+.|.++|-+
T Consensus 187 frg~A~rllg~~e~aa~dl~~a~kld~d 214 (377)
T KOG1308|consen 187 FRGYAERLLGNWEEAAHDLALACKLDYD 214 (377)
T ss_pred hhhHHHHHhhchHHHHHHHHHHHhcccc
Confidence 9999999999999999999999988765
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.5e-10 Score=106.71 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=95.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+--.|..+...++...|+++|+.|++++|. +..+|+.+|.+|..++-..=|+-+|++|+++.|++...|.-+|.||
T Consensus 364 ~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~kPnDsRlw~aLG~CY 442 (559)
T KOG1155|consen 364 LSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALELKPNDSRLWVALGECY 442 (559)
T ss_pred hHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 456677888899999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.++++.++|+++|.+|+...-.+..
T Consensus 443 ~kl~~~~eAiKCykrai~~~dte~~ 467 (559)
T KOG1155|consen 443 EKLNRLEEAIKCYKRAILLGDTEGS 467 (559)
T ss_pred HHhccHHHHHHHHHHHHhccccchH
Confidence 9999999999999999988766543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.2e-10 Score=116.79 Aligned_cols=105 Identities=5% Similarity=-0.087 Sum_probs=78.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..++..|.+....|++++|...++.+++++|+ +..++.++|.++.+++++++|+..+++++..+|+++.+++.+|.++
T Consensus 86 ~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~~a~~l 164 (694)
T PRK15179 86 ELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILLEAKSW 164 (694)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 566677777777777777777777777777777 7777777777777777777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.++|+|++|+..|+++++-+|++..+
T Consensus 165 ~~~g~~~~A~~~y~~~~~~~p~~~~~ 190 (694)
T PRK15179 165 DEIGQSEQADACFERLSRQHPEFENG 190 (694)
T ss_pred HHhcchHHHHHHHHHHHhcCCCcHHH
Confidence 77777777777777777766665443
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.1e-10 Score=104.23 Aligned_cols=105 Identities=17% Similarity=0.216 Sum_probs=96.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh---HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHH---HHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP---TVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPT---AFY 472 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~ 472 (508)
+..++..|..++..|+|++|+..|+++++..|. ++ .+++.+|.+|..+|++++|+..|+++++.+|++.. +++
T Consensus 33 ~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 111 (235)
T TIGR03302 33 AEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAYY 111 (235)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHHHH
Confidence 456788999999999999999999999999998 65 68899999999999999999999999999998876 799
Q ss_pred HHHHHHHHc--------CCHHHHHHHHHHHhcCccccccc
Q 010529 473 MQSVALSKL--------DMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 473 ~~g~~~~~~--------~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|.+++.+ |++++|++.|+++++.+|++...
T Consensus 112 ~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 151 (235)
T TIGR03302 112 LRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYA 151 (235)
T ss_pred HHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhH
Confidence 999999987 89999999999999999998654
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.4e-10 Score=80.98 Aligned_cols=64 Identities=20% Similarity=0.220 Sum_probs=60.1
Q ss_pred HhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH
Q 010529 404 KQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP 468 (508)
Q Consensus 404 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 468 (508)
.+|..++..|+|++|+..|+++++.+|. ++.+|+.+|.++..+|++++|+..|+++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 5789999999999999999999999999 999999999999999999999999999999999975
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.7e-10 Score=106.80 Aligned_cols=93 Identities=13% Similarity=0.021 Sum_probs=84.6
Q ss_pred hhHHHHHHHHHHHHh---cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Q 010529 413 KDFKTAIDYYSQFIN---VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAAD 489 (508)
Q Consensus 413 ~~~~~A~~~~~~ai~---~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~ 489 (508)
+..+.++..++++|. ++|...+..|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.++..+|++++|+.
T Consensus 40 ~~~e~~i~~~~~~l~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~ 119 (296)
T PRK11189 40 LQQEVILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYE 119 (296)
T ss_pred hHHHHHHHHHHHHHccccCCcHhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 456888999999996 55553578899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccccc
Q 010529 490 MLLEGAALEEKRQRGA 505 (508)
Q Consensus 490 ~~~~a~~~~p~~~~~~ 505 (508)
+|++|++++|++..++
T Consensus 120 ~~~~Al~l~P~~~~a~ 135 (296)
T PRK11189 120 AFDSVLELDPTYNYAY 135 (296)
T ss_pred HHHHHHHhCCCCHHHH
Confidence 9999999999986553
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=114.71 Aligned_cols=99 Identities=10% Similarity=-0.080 Sum_probs=84.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..++++++++|.++.+++.++.++
T Consensus 338 ~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~~ 416 (553)
T PRK12370 338 PQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWIT 416 (553)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 344566788888888999999999999999998 8888999999999999999999999999999998888777777778
Q ss_pred HHcCCHHHHHHHHHHHhcCc
Q 010529 479 SKLDMQKDAADMLLEGAALE 498 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~ 498 (508)
+.+|++++|+..++++++.+
T Consensus 417 ~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 417 YYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HhccCHHHHHHHHHHHHHhc
Confidence 88888999999998888765
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.3e-09 Score=93.96 Aligned_cols=104 Identities=11% Similarity=0.008 Sum_probs=96.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh--CCCcHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA--HPDWPTAFYMQSV 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~~g~ 476 (508)
...+...+..+...|..+.|-+.|++|+.++|+ +.++++|-|.-+..+|+|++|...|++|++. .|.-.+.|-|+|.
T Consensus 69 ~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~ 147 (250)
T COG3063 69 YLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGL 147 (250)
T ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHH
Confidence 556778889999999999999999999999999 9999999999999999999999999999975 3566889999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
|-+++|+.+.|..+|+++|++||++.-
T Consensus 148 Cal~~gq~~~A~~~l~raL~~dp~~~~ 174 (250)
T COG3063 148 CALKAGQFDQAEEYLKRALELDPQFPP 174 (250)
T ss_pred HHhhcCCchhHHHHHHHHHHhCcCCCh
Confidence 999999999999999999999999753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 508 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-28 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-27 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-24 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-24 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-24 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-22 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-22 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-21 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 3e-12 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 5e-12 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-10 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 1e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-09 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-09 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 3e-09 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 4e-09 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 5e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 5e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-09 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 6e-09 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 7e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 7e-09 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 7e-09 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 8e-09 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-08 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-08 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-08 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-08 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-08 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-08 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-08 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-08 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-08 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 3e-08 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 4e-08 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-08 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-08 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-08 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 4e-08 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 4e-08 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 5e-08 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 5e-08 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 5e-08 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 6e-08 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 6e-08 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 6e-08 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 6e-08 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 6e-08 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 6e-08 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 7e-08 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 7e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 7e-08 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 7e-08 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 7e-08 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 8e-08 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 8e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 8e-08 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 9e-08 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 9e-08 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-07 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-07 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 2e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-07 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-07 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-07 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-07 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-07 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-07 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-07 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-07 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 3e-07 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-07 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-07 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-07 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-07 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-07 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 3e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 3e-07 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 4e-07 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-07 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-07 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 4e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 4e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-07 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-07 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 4e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 4e-07 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 4e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-07 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 4e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 5e-07 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 5e-07 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 5e-07 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 5e-07 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 5e-07 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 5e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 5e-07 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-07 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 5e-07 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 5e-07 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 5e-07 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 6e-07 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-07 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 6e-07 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 6e-07 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 7e-07 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-07 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 7e-07 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 7e-07 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 7e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 8e-07 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 8e-07 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 8e-07 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-07 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 8e-07 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 9e-07 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 9e-07 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 9e-07 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 9e-07 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-06 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 1e-06 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-06 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-06 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-06 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-06 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-06 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-06 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-06 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-06 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 3e-06 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 3e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-06 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 4e-06 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 4e-06 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 4e-06 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 4e-06 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 4e-06 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 4e-06 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 4e-06 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 4e-06 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 4e-06 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 5e-06 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-06 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 6e-06 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 6e-06 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 6e-06 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 6e-06 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 7e-06 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 7e-06 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 7e-06 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 8e-06 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 8e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 8e-06 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-05 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 1e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 1e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 1e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-05 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 2e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-05 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 2e-05 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 2e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-05 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 2e-05 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 2e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-05 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 2e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-05 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 3e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 4e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 4e-05 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 4e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 4e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 4e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 4e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-05 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-05 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 5e-05 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 5e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 6e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 7e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 7e-05 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 7e-05 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-04 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-04 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-04 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-04 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-04 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-04 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-04 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-04 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-04 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-04 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-04 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-04 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-04 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-04 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-04 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 5e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 5e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 5e-04 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 7e-04 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 7e-04 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 8e-04 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 8e-04 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 8e-04 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 8e-04 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 4e-62
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 40/302 (13%)
Query: 57 FSFLDLRAATNNFSSDNIVSES---GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQ- 112
FSF +L+ TNNF I GE VVYKG + N +AVKK + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 73
Query: 113 ---FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQ-TIEWP 168
F +E + + K + + L L+G+ GD+ LV YMPN +L L + + W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 169 LRLRVAFYIAEALDYCNTEGRPLYHDLNAYR------VLFDEDGDPRLSCFGLMK-NSMD 221
+R ++A A +++ L+ + + +R +L DE ++S FGL + +
Sbjct: 134 MRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 222 GKSY-STNLA----YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK-----HIPPSHALD 271
++ ++ + Y PE L+ G + P+S IYSFG VLL++++G H P LD
Sbjct: 187 AQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 272 MIR-----GENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + + +D + S + +ASQCL + +RP K + L +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 327 QT 328
Sbjct: 305 TA 306
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 1e-61
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 26/290 (8%)
Query: 57 FSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP-DPTQFKE 115
FS +L+ A++NFS+ NI+ G VYKGRL + +AVK+ + QF+
Sbjct: 20 FSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76
Query: 116 EAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLF--HWEKQTIEWPLRLRV 173
E E + + L L G+C ERLLV YM N ++A L + ++WP R R+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 174 AFYIAEALDYCNTEGRP--LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY-STNLA 230
A A L Y + P ++ D+ A +L DE+ + + FGL K ++ +T +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 231 ----YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK-----HIPP--------SHALDMI 273
+ PEYL G+ ++ ++ +G +LL+L++G+ ++
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 274 RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
+ + L L+D L+G + EE Q++ +A C Q P ERP +V L
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 4e-60
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 34/317 (10%)
Query: 32 STESDTATPTATVQPTNEEAPLFS-EFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGR 90
S S ++ P S +DL ATNNF ++ VYKG
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGV---FGKVYKGV 59
Query: 91 LENRQWIAVKKFTKVAWPDPTQ----FKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146
L + +A+K+ T P+ +Q F+ E E + R L +LIG+C +E +L+ +
Sbjct: 60 LRDGAKVALKRRT----PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115
Query: 147 YMPNDTLAKHLF--HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
YM N L +HL+ ++ W RL + A L Y +T + H D+ + +L D
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLD 173
Query: 204 EDGDPRLSCFGLMK-NSMDGKSY-STNLAYTP----PEYLKNGRVIPESVIYSFGTVLLD 257
E+ P+++ FG+ K + +++ ST + T PEY GR+ +S +YSFG VL +
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 258 LLSGK----HIPPSH-------ALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306
+L + P A++ L ++D +L K E + A +CL
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 307 QYEPRERPSTKNLVVTL 323
+RPS +++ L
Sbjct: 294 ALSSEDRPSMGDVLWKL 310
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 2e-28
Identities = 51/321 (15%), Positives = 104/321 (32%), Gaps = 53/321 (16%)
Query: 55 SEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFK 114
+ +L + + + V+K +L N +AVK F D ++
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGR---FGCVWKAQLLNEY-VAVKIFP---IQDKQSWQ 64
Query: 115 EEAE--GVGKLRRKRLANLIGYCCAGD----ERLLVAEYMPNDTLAKHLFHWEKQTIEWP 168
E E + ++ + + IG G + L+ + +L+ L + W
Sbjct: 65 NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWN 121
Query: 169 LRLRVAFYIAEALDYCNTEGRPLY--------H-DLNAYRVLFDEDGDPRLSCFGLMKNS 219
+A +A L Y + + L H D+ + VL + ++ FGL
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 220 MDGKSYSTNLA------YTPPEYLKNGRVIPESV-----IYSFGTVLLDLLSGK------ 262
GKS Y PE L+ +Y+ G VL +L S
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 263 ----------HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG-LASQCLQYEPR 311
I +L+ ++ ++ L + ++ +C ++
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301
Query: 312 ERPSTKNLVVTLARLQTKSDV 332
R S + + ++Q +++
Sbjct: 302 ARLSAGCVGERITQMQRLTNI 322
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 22/257 (8%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPT--QFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142
++KGR + I VK W F EE + + ++G C +
Sbjct: 25 ELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 143 L--VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYR 199
+ +MP +L L ++ ++ A +A + + +T + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESV---IYSFGTVLL 256
V+ DED R+S + K S A+ PE L+ ++SF +L
Sbjct: 144 VMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 257 DLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L++ + + + E L + + S L C+ +P +
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSK--------LMKICMNEDPAK 254
Query: 313 RPSTKNLVVTLARLQTK 329
RP +V L ++Q K
Sbjct: 255 RPKFDMIVPILEKMQDK 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-22
Identities = 52/263 (19%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPT--QFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142
V++ +AVK + + +F E + +LR + +G
Sbjct: 52 TVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 143 LVAEYMPNDTLAKHLF-HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRV 200
+V EY+ +L + L ++ ++ RL +A+ +A+ ++Y + P+ H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 201 LFDEDGDPRLSCFGL----MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLL 256
L D+ ++ FGL + KS + + PE L++ +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 257 DLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L + + ++ P+ + + + L + +L + ++ + C EP +
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA--------IIEGCWTNEPWK 282
Query: 313 RPSTKNLVVTLARLQTKSDVPSN 335
RPS ++ L L + P N
Sbjct: 283 RPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 6e-22
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 28/261 (10%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGYCCAGDERL 142
VYKG+ +AVK V P P Q FK E + K R + +G +
Sbjct: 40 VYKGKWHGD--VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLA 95
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVL 201
+V ++ +L HL H + E + +A A +DY + + H DL + +
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDY--LHAKSIIHRDLKSNNIF 152
Query: 202 FDEDGDPRLSCFGL--MKNSMDGKSYSTN----LAYTPPEYLKNGRVIPESV---IYSFG 252
ED ++ FGL K+ G + + PE ++ P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 253 TVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
VL +L++G+ +I +I L + + + + + L ++CL+
Sbjct: 213 IVLYELMTGQLPYSNINNRDQ--IIEMVGRGSLSPDLSKVRSNCPKR--MKRLMAECLKK 268
Query: 309 EPRERPSTKNLVVTLARLQTK 329
+ ERPS ++ + L +
Sbjct: 269 KRDERPSFPRILAEIEELARE 289
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 7e-21
Identities = 66/346 (19%), Positives = 110/346 (31%), Gaps = 72/346 (20%)
Query: 56 EFSFLDLRAATNNFSSDNIVSE--SGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQF 113
E + + +N ++ G VYKG L+ R +AVK F+ + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 114 KEEAE--GVGKLRRKRLANLIGYCCAGD-----ERLLVAEYMPNDTLAKHLFHWEKQTIE 166
E V + +A I E LLV EY PN +L K+L T +
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSD 109
Query: 167 WPLRLRVAFYIAEALDYCNTEGRPLYH--------DLNAYRVLFDEDGDPRLSCFGL--- 215
W R+A + L Y +TE H DLN+ VL DG +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 216 -----MKNSMDGKSYSTNLA----YTPPEYLKN-------GRVIPESVIYSFGTVLLDLL 259
+ + + + + Y PE L+ + + +Y+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 260 SGK------HIPPSHAL-------------DMIR---GENLNLLMDSHLEGKFSSEEATQ 297
P + + DM E + +S
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE--NSLAVRS 287
Query: 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKH 343
+ C + R + + +A L + +V H
Sbjct: 288 LKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHHH 333
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-20
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 53/283 (18%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPT-----QFKEEAEGVGKLRRKRLANLIGYCCAGD 139
VY GR +A++ FK E + R + + +G C +
Sbjct: 48 QVYHGRW--HGEVAIRLID---IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
++ TL + K ++ ++A I + + Y + + H DL +
Sbjct: 103 HLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGY--LHAKGILHKDLKSK 159
Query: 199 RVLFDED----GDPRLSCFGL--MKNSMDGKSYSTNL-------AYTPPEYLKNGRVIPE 245
V +D D FGL + + L + PE ++ E
Sbjct: 160 NVFYDNGKVVITD-----FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 246 SV---------IYSFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSS 292
+++ GT+ +L + + P + + L + + S
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISD 274
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
+ C +E ERP+ L+ L +L ++ S+
Sbjct: 275 --------ILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-20
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 36/266 (13%)
Query: 85 VVYKGRLENR-QWIAVKKFTKVAWPDPT-------QFKEEAEGVGKLRRKRLANLIGYCC 136
+V+KGRL +A+K T +F+ E + L + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 137 AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DL 195
+ +V E++P L L + I+W ++LR+ IA ++Y + P+ H DL
Sbjct: 94 --NPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 196 NAYRVLFDEDGDPRLSC-----FGLMKNSMDGKSYST-NLAYTPPEYLKNGRVIP--ESV 247
+ + + C FGL + S+ S N + PE + E
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI-GAEEESYTEKA 209
Query: 248 -IYSFGTVLLDLLSGK----HIPPSHA--LDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300
YSF +L +L+G+ ++MIR E L + + +
Sbjct: 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-------- 261
Query: 301 LASQCLQYEPRERPSTKNLVVTLARL 326
+ C +P++RP +V L+ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 7e-20
Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 32/259 (12%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPT----QFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
VY+ + +AVK D + ++EA+ L+ + L G C
Sbjct: 22 KVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYH-DLNAY 198
LV E+ L + L + I + + A IA ++Y + E P+ H DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 199 RVLFDEDGDPRLSC--------FGL--MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVI 248
+L + + FGL + S + A+ PE ++ S +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDV 197
Query: 249 YSFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304
+S+G +L +LL+G+ I + L L + S F+ L
Sbjct: 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAK--------LMED 249
Query: 305 CLQYEPRERPSTKNLVVTL 323
C +P RPS N++ L
Sbjct: 250 CWNPDPHSRPSFTNILDQL 268
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-19
Identities = 48/271 (17%), Positives = 89/271 (32%), Gaps = 40/271 (14%)
Query: 86 VYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
K E + + +K+ + F +E + + L + IG +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
EY+ TL + W R+ A IA + Y + H DLN++ L
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAY--LHSMNIIHRDLNSHNCLVR 142
Query: 204 EDGDPRLSCFGL----------------MKNSMDGKSYST--NLAYTPPEYLKNGRVIPE 245
E+ + ++ FGL +K K Y+ N + PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 246 SVIYSFGTVLLDLLSGKHIPP-------SHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
++SFG VL +++ + P L++ + +
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP----------PSF 252
Query: 299 VGLASQCLQYEPRERPSTKNLVVTLARLQTK 329
+ +C +P +RPS L L L+
Sbjct: 253 FPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-18
Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 29/258 (11%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
VV K + + +A+K+ + F E + ++ + L G C + LV
Sbjct: 23 VVCKAKWRA-KDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 145 AEYMPNDTLAKHLFHWEKQTIE--WPLRLRVAFYIAEALDYC-NTEGRPLYH-DLNAYRV 200
EY +L L H + + ++ + Y + + + L H DL +
Sbjct: 78 MEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 136
Query: 201 LFDEDGD-PRLSCFGLMKNSMDGKSYST-NLAYTPPEYLKNGRVIPESV-IYSFGTVLLD 257
L G ++ FG + + + + A+ PE + E ++S+G +L +
Sbjct: 137 LLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNY-SEKCDVFSWGIILWE 195
Query: 258 LLSGK------HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311
+++ + P + + + +L S L ++C +P
Sbjct: 196 VITRRKPFDEIGGPAFRIMWAVH-NGTRPPLIKNLPKPIES--------LMTRCWSKDPS 246
Query: 312 ERPSTKNLVVTLARLQTK 329
+RPS + +V + L
Sbjct: 247 QRPSMEEIVKIMTHLMRY 264
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 2e-15
Identities = 48/294 (16%), Positives = 106/294 (36%), Gaps = 58/294 (19%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------- 138
V++G+ + +AVK F+ + + EAE + + R N++G+ A
Sbjct: 58 VWRGKWRGEE-VAVKIFS---SREERSWFREAE-IYQTVMLRHENILGFIAADNKDNGTW 112
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH----- 193
+ LV++Y + +L +L + T+ +++A A L + + E
Sbjct: 113 TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 194 --DLNAYRVLFDEDGDPRLSCFGL------MKNSMDGKSYST--NLAYTPPEYLKNGRVI 243
DL + +L ++G ++ GL +++D Y PE L + +
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 229
Query: 244 PESV------IYSFGTVLLDLLSGK---------------HIPPSHALDMIRG----ENL 278
IY+ G V ++ +P +++ +R + L
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 289
Query: 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332
+ + + S E + + +C R + + TL++L + +
Sbjct: 290 RPNIPNRWQ---SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 9e-14
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 18/254 (7%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V+ G +A+K K P F +EA+ + KLR ++L L + + +V
Sbjct: 200 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVT 257
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
EYM +L L + + P + +A IA + Y E H DL A +L E
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY--VERMNYVHRDLRAANILVGE 315
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+ +++ FGL + D + + A +T PE GR +S ++SFG +L +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 260 SGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQYEPRERPSTK 317
+ +P M+ E L+ + + + E + + L QC + EP ERP+ +
Sbjct: 376 TKGRVPYP---GMVNREVLDQVERGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFE 429
Query: 318 NLVVTLARLQTKSD 331
L L T ++
Sbjct: 430 YLQAFLEDYFTSTE 443
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 55/292 (18%), Positives = 108/292 (36%), Gaps = 54/292 (18%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN---LIGYCCAGDER- 141
V+ G+ + +AVK F + + E E + + R N I G
Sbjct: 53 VWMGKWRGEK-VAVKVFF---TTEEASWFRETE-IYQTVLMRHENILGFIAADIKGTGSW 107
Query: 142 ---LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDY-----CNTEGRPLY- 192
L+ +Y N +L +L + T++ L++A+ L + +T+G+P
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 193 H-DLNAYRVLFDEDGDPRLSCFGL----MKNSMDGKSYSTNLA----YTPPEYLKNGRVI 243
H DL + +L ++G ++ GL + ++ + Y PPE L + +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL-DESLN 223
Query: 244 PESV-------IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS------------ 284
+YSFG +L ++ + +L S
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 285 ---HLEGKFSSEEATQVVG-LASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332
++SS+E + +G L ++C + P R + + TLA++ D+
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 2e-13
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 20/267 (7%)
Query: 86 VYKGRLENRQW-IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
VY+G + +AVK K + +F +EA + +++ L L+G C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
E+M L +L +Q + + L +A I+ A++Y E + H +L A L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY--LEKKNFIHRNLAARNCLVG 352
Query: 204 EDGDPRLSCFGL---MKNSMDGKSYSTNLAY--TPPEYLKNGRVIPESVIYSFGTVLLDL 258
E+ +++ FGL M T PE L + +S +++FG +L ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 259 LSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQYEPRERPS 315
+ P P + + LL + +E E + V L C Q+ P +RPS
Sbjct: 413 ATYGMSPYP----GIDLSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRPS 465
Query: 316 TKNLVVTLARLQTKSDVPSNVMLRVSK 342
+ + +S + V + K
Sbjct: 466 FAEIHQAFETMFQESSISDEVEKELGK 492
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 18/254 (7%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V+ G +A+K K P F +EA+ + KLR ++L L + + +V
Sbjct: 283 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVT 340
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
EYM +L L + + P + +A IA + Y E H DL A +L E
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY--VERMNYVHRDLRAANILVGE 398
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+ +++ FGL + D + + A +T PE GR +S ++SFG +L +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 260 SGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQYEPRERPSTK 317
+ +P M+ E L+ + + + E + + L QC + EP ERP+ +
Sbjct: 459 TKGRVPYP---GMVNREVLDQVERGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFE 512
Query: 318 NLVVTLARLQTKSD 331
L L T ++
Sbjct: 513 YLQAFLEDYFTSTE 526
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 2e-13
Identities = 55/268 (20%), Positives = 97/268 (36%), Gaps = 46/268 (17%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V+ +AVK K F EA + L+ +L L + ++
Sbjct: 204 VWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIIT 261
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
E+M +L L E P + + IAE + + E R H DL A +L
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF--IEQRNYIHRDLRAANILVSA 319
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+++ FGL + D + + A +T PE + G +S ++SFG +L++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 260 SGKHIP-----PSHALDMI-RG----------ENLNLLMDSHLEGKFSSEEATQVVGLAS 303
+ IP + + RG E L +M
Sbjct: 380 TYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM--------------------M 419
Query: 304 QCLQYEPRERPSTKNLVVTLARLQTKSD 331
+C + P ERP+ + + L T ++
Sbjct: 420 RCWKNRPEERPTFEYIQSVLDDFYTATE 447
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 31/269 (11%)
Query: 86 VYKGRLENRQWIAVKKFTKVA-------WPDPTQ-FKEEAEGVGKLRRKRLANLIGYCCA 137
++KG T+V + ++ F E A + KL K L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLN 196
GDE +LV E++ +L +L K I +L VA +A A+ + E L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHF--LEENTLIHGNVC 140
Query: 197 AYRVLFDEDGDPR--------LSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVI-PESV 247
A +L + D + LS G+ + + + PPE ++N + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 248 IYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVVGLASQC 305
+SFGT L ++ SG P + L D H L + +A ++ L + C
Sbjct: 201 KWSFGTTLWEICSGGDKPLS----ALDSQRKLQFYEDRHQLP----APKAAELANLINNC 252
Query: 306 LQYEPRERPSTKNLVVTLARLQTKSDVPS 334
+ YEP RPS + ++ L L T VP
Sbjct: 253 MDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 7e-13
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALL 455
M + E +++G+ A + A+ YS+ I ++ + +Y+ RS + A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYE 59
Query: 456 DAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
D + PDW + ++ AL L+ ++A EG E
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 9e-13
Identities = 54/267 (20%), Positives = 105/267 (39%), Gaps = 46/267 (17%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
VV G+ + + +AVK K +F +EA+ + KL +L G C +V
Sbjct: 23 VVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
EY+ N L +L + +E L + + + E + + E H DL A L D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAF--LESHQFIHRDLAARNCLVD 138
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDL 258
D ++S FG+ + +D + S+ ++ PE + +S +++FG ++ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 259 LSGKHIP-----PSHALDMI-RG----------ENLNLLMDSHLEGKFSSEEATQVVGLA 302
S +P S + + +G + + +M
Sbjct: 199 FSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIM-------------------- 238
Query: 303 SQCLQYEPRERPSTKNLVVTLARLQTK 329
C P +RP+ + L+ ++ L+ K
Sbjct: 239 YSCWHELPEKRPTFQQLLSSIEPLREK 265
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 20/268 (7%)
Query: 85 VVYKGRLENRQW-IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
VY+G + +AVK K + +F +EA + +++ L L+G C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLF 202
+ E+M L +L +Q + + L +A I+ A++Y E + H DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY--LEKKNFIHRDLAARNCLV 144
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLD 257
E+ +++ FGL + + A +T PE L + +S +++FG +L +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 258 LLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQYEPRERP 314
+ + P P + + LL + +E E + V L C Q+ P +RP
Sbjct: 205 IATYGMSPYP----GIDLSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRP 257
Query: 315 STKNLVVTLARLQTKSDVPSNVMLRVSK 342
S + + +S + V + K
Sbjct: 258 SFAEIHQAFETMFQESSISDEVEKELGK 285
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 48/288 (16%), Positives = 93/288 (32%), Gaps = 58/288 (20%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN---LIGYCCAGD--- 139
V++G + +AVK F+ D + E E + R N I
Sbjct: 24 VWRGSWQGEN-VAVKIFS---SRDEKSWFRETE-LYNTVMLRHENILGFIASDMTSRHSS 78
Query: 140 -ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH----- 193
+ L+ Y +L +L + T++ LR+ IA L + + E
Sbjct: 79 TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 194 --DLNAYRVLFDEDGDPRLSCFGL----MKNSMDGKSYSTNLA----YTPPEYLKNGRVI 243
DL + +L ++G ++ GL +++ + Y PE L +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 244 PESV------IYSFGTVLLDLLSGKH---------------IPPSHALDMIRG----ENL 278
I++FG VL ++ +P + + +R +
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+ + S T + L +C P R + + TL ++
Sbjct: 256 RPNIPNRWF---SDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 46/266 (17%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
+V+ G N+ +A+K + F EEAE + KL +L L G C LV
Sbjct: 23 LVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
E+M + L+ +L ++ L + + E + Y E + H DL A L
Sbjct: 82 TEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAY--LEEACVIHRDLAARNCLVG 138
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDL 258
E+ ++S FG+ + +D + S+ + PE R +S ++SFG ++ ++
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 259 LSGKHIP-P----SHALDMI-RG----------ENLNLLMDSHLEGKFSSEEATQVVGLA 302
S IP S ++ I G ++ +M
Sbjct: 199 FSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM-------------------- 238
Query: 303 SQCLQYEPRERPSTKNLVVTLARLQT 328
+ C + P +RP+ L+ LA +
Sbjct: 239 NHCWRERPEDRPAFSRLLRQLAEIAE 264
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 5e-12
Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 28/259 (10%)
Query: 86 VYKGRL-ENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143
V+ GRL + +AVK + +F +EA + + + LIG C +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLF 202
V E + L E + L++ A ++Y E + H DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYL--ESKCCIHRDLAARNCLV 246
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVIPESVIYSFGTVLL 256
E ++S FG+ + DG ++ +T PE L GR ES ++SFG +L
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 257 DLLSGKHIP-----PSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEP 310
+ S P + + +G L V L QC YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP----------DAVFRLMEQCWAYEP 356
Query: 311 RERPSTKNLVVTLARLQTK 329
+RPS + L ++ +
Sbjct: 357 GQRPSFSTIYQELQSIRKR 375
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 62/263 (23%), Positives = 98/263 (37%), Gaps = 46/263 (17%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL-LV 144
V G + +AVK A F EA + +LR L L+G L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
EYM +L +L + + L+ + + EA++Y EG H DL A VL
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY--LEGNNFVHRDLAARNVLVS 323
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTNLAY--TPPEYLKNGRVIPESVIYSFGTVLLDLLS- 260
ED ++S FGL K + L T PE L+ + +S ++SFG +L ++ S
Sbjct: 324 EDNVAKVSDFGLTKE-ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382
Query: 261 GKH----IPPSHALDMI-RG----------ENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
G+ IP + + +G + +M C
Sbjct: 383 GRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM--------------------KNC 422
Query: 306 LQYEPRERPSTKNLVVTLARLQT 328
+ RP+ L L ++T
Sbjct: 423 WHLDAATRPTFLQLREQLEHIRT 445
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 9e-12
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 20/255 (7%)
Query: 86 VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145
V+ G +AVK K P F EA + +L+ +RL L + ++
Sbjct: 29 VWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIIT 86
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFDE 204
EYM N +L L + L +A IAE + + E R H DL A +L +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF--IEERNYIHRDLRAANILVSD 144
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+++ FGL + D + + A +T PE + G +S ++SFG +L +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 260 SGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQYEPRERPST 316
+ IP P M E + L + + + + + L C + P +RP+
Sbjct: 205 THGRIPYP----GMTNPEVIQNLERGYRMV---RPDNCPEELYQLMRLCWKERPEDRPTF 257
Query: 317 KNLVVTLARLQTKSD 331
L L T ++
Sbjct: 258 DYLRSVLEDFFTATE 272
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 9e-12
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 46/264 (17%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
VV G+ + +A+K K +F EEA+ + L ++L L G C ++
Sbjct: 39 VVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
EYM N L +L + + L + + EA++Y E + H DL A L +
Sbjct: 98 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEY--LESKQFLHRDLAARNCLVN 154
Query: 204 EDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYSFGTVLLDL 258
+ G ++S FGL + +D + S+ + ++PPE L + +S I++FG ++ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 259 LSGKHIP-P----SHALDMI-RG----------ENLNLLMDSHLEGKFSSEEATQVVGLA 302
S +P S + I +G E + +M
Sbjct: 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM-------------------- 254
Query: 303 SQCLQYEPRERPSTKNLVVTLARL 326
C + ERP+ K L+ + +
Sbjct: 255 YSCWHEKADERPTFKILLSNILDV 278
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 65.1 bits (158), Expect = 2e-11
Identities = 39/337 (11%), Positives = 84/337 (24%), Gaps = 73/337 (21%)
Query: 85 VVYKGR-LENRQWIAVK---KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCC---- 136
+ E + V + Q KEE + LR +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 137 -----------------AGDERLLVAEY---MPND-----TLAKHLFHW--EKQTIEWPL 169
+ + V P T + L +++
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 170 RLRVAFYIAEALDYCNTEGRPLYH-DL---NAYRVLFDEDGDPRLSCFGLMKNSMDGKSY 225
RL++ + L + G L H L + ++ D+ G L+ F +
Sbjct: 213 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 226 STNLAYTPPEYL----------KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG 275
+ PPE + ++ G + + P
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LP------NTD 319
Query: 276 ENLNLLMDSHLEGKFS-SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPS 334
+ + + + ++ L+Y +R + T Q ++++ +
Sbjct: 320 DAALGGSEWIFRSCKNIPQPVRALL---EGFLRYPKEDRLLPLQAMETPEYEQLRTELSA 376
Query: 335 NVML-------RVSKHEEAQSTPQRPLSPLAEACSRM 364
+ L T Q + AEA + +
Sbjct: 377 ALPLYQTDGEPTREGGAPPSGTSQPDEAGAAEAVTAI 413
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 2e-11
Identities = 35/284 (12%), Positives = 71/284 (25%), Gaps = 67/284 (23%)
Query: 85 VVYKGR-LENRQWIAVK---KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCC---- 136
+ E + V + Q KEE + LR +
Sbjct: 88 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147
Query: 137 -----------------------AGDERLLVAEYMPND--TLAKHLFHW--EKQTIEWPL 169
R + M ++ T + L +++
Sbjct: 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207
Query: 170 RLRVAFYIAEALDYCNTEGRPLYH-DL---NAYRVLFDEDGDPRLSCFGLMKNSMDGKSY 225
RL++ + L + G L H L + ++ D+ G L+ F +
Sbjct: 208 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGARVVS 262
Query: 226 STNLAYTPPEYLKNGRVIPESV-----------IYSFGTVLLDLLSGKHIPPSHALDMIR 274
S + + PPE I ++ G V+ + P I
Sbjct: 263 SVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD--LP------IT 314
Query: 275 GENLNLLMDSHLEGKFS-SEEATQVVGLASQCLQYEPRERPSTK 317
+ + + + ++ L+Y +R
Sbjct: 315 KDAALGGSEWIFRSCKNIPQPVRALL---EGFLRYPKEDRLLPL 355
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 63/264 (23%), Positives = 99/264 (37%), Gaps = 46/264 (17%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL-L 143
V G + +AVK A F EA + +LR L L+G L +
Sbjct: 36 DVMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLF 202
V EYM +L +L + + L+ + + EA++Y EG H DL A VL
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY--LEGNNFVHRDLAARNVLV 150
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLAY--TPPEYLKNGRVIPESVIYSFGTVLLDLLS 260
ED ++S FGL K + + L T PE L+ + +S ++SFG +L ++ S
Sbjct: 151 SEDNVAKVSDFGLTKEASS-TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 261 -GKH----IPPSHALDMI-RG----------ENLNLLMDSHLEGKFSSEEATQVVGLASQ 304
G+ IP + + +G + +M
Sbjct: 210 FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM--------------------KN 249
Query: 305 CLQYEPRERPSTKNLVVTLARLQT 328
C + RPS L L ++T
Sbjct: 250 CWHLDAAMRPSFLQLREQLEHIKT 273
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 2e-10
Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E + +G+ F+ D+ TA+ +Y++ + + + +Y+ R+ C AL D
Sbjct: 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTC 73
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
+ + ++ L + A + ++
Sbjct: 74 IRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 2e-10
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E ++QG+ F + + A Y + I N + Y R+LC+L + + AL D +A
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502
A + +++ +A L +L ++++
Sbjct: 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 50/253 (19%), Positives = 92/253 (36%), Gaps = 33/253 (13%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYC---CAGD 139
VYKG E +A + + +FKEEAE + L+ + G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 140 ERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+ + LV E M + TL +L + ++ + I + L + +T P+ H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 198 YRVLFD-EDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESV-IYSF 251
+ G ++ GL + + + TP PE + ESV +Y+F
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKA--VIGTPEFMAPEMYEEK--YDESVDVYAF 215
Query: 252 GTVLLDLLSGKH----IPPSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306
G +L++ + ++ + + D E +++ C+
Sbjct: 216 GMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA-----IPEVKEII---EGCI 267
Query: 307 QYEPRERPSTKNL 319
+ ER S K+L
Sbjct: 268 RQNKDERYSIKDL 280
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-10
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
+ + +G+ A K++ AID Y+Q +++ +P + R+ + S + + A DA A
Sbjct: 13 KLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAAYSASGQHEKAAEDAELA 71
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
P + A+ +A + K A + +G E
Sbjct: 72 TVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 5e-10
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAA 453
++ E + Q + F+ KD++ AI +YSQ I +N + Y RSL +L ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYA 66
Query: 454 LLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
L DA +A + +Y ++ + L + A ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 50/262 (19%), Positives = 87/262 (33%), Gaps = 60/262 (22%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLA---NLIGYCCA--GD 139
V+K R E+ + AVK+ + ++ AE VG +++ + A
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAE-VGSH--EKVGQHPCCVRLEQAWEEG 129
Query: 140 ERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHDL 195
L L E L +H W E +V Y+ + AL + H
Sbjct: 130 GILYLQTELCGPS-LQQHCEAWGASLPE----AQVWGYLRDTLLALAHL--------HSQ 176
Query: 196 N-AYR------VLFDEDGDPRLSCFGLMK--------NSMDGKSYSTNLAYTPPEYLKNG 240
+ + G +L FGL+ +G Y PE L+
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-----YMAPELLQGS 231
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS---SEEATQ 297
+ ++S G +L++ P GE L +L +F+ S E
Sbjct: 232 YG-TAADVFSLGLTILEVACNME-LPHG------GEGWQQLRQGYLPPEFTAGLSSELRS 283
Query: 298 VVGLASQCLQYEPRERPSTKNL 319
V+ L+ +P+ R + + L
Sbjct: 284 VL---VMMLEPDPKLRATAEAL 302
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 9e-10
Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQ 459
L + +G+ F+ D+ A+ +Y++ I N +Y+ R+ C+ AL D +
Sbjct: 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
P + + ++ AL + A D+ + L+
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-09
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E ++QG+ F + + A Y + I N + Y R+LC+L + + AL D +A
Sbjct: 11 ELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRA 69
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
A + +++ +A L +L
Sbjct: 70 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 53/265 (20%), Positives = 94/265 (35%), Gaps = 41/265 (15%)
Query: 85 VVYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYC 135
VYKG K VA + +EA + + + L+G
Sbjct: 30 TVYKGLWIPE---GEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-I 85
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-D 194
C L+ + MP L ++ K I L IA+ ++Y E R L H D
Sbjct: 86 CLTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNY--LEDRRLVHRD 142
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVI 248
L A VL +++ FGL K + + + E + + +S +
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 249 YSFGTVLLDLLS-GKH----IPPSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVV-GL 301
+S+G + +L++ G IP S ++ +GE L T V +
Sbjct: 203 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI-----------CTIDVYMI 251
Query: 302 ASQCLQYEPRERPSTKNLVVTLARL 326
+C + RP + L++ +++
Sbjct: 252 MRKCWMIDADSRPKFRELIIEFSKM 276
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 49/295 (16%), Positives = 98/295 (33%), Gaps = 33/295 (11%)
Query: 85 VVYKGRL-----ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
V+KG + + +K + + +G L + L+G C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
LV +Y+P +L H+ + + L L IA+ + Y E + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYY--LEEHGMVHRNLAA 143
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSF 251
VL +++ FG+ + + E + G+ +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 252 GTVLLDLLS-GKH----IPPSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
G + +L++ G + + D++ +GE L ++ V + +C
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID----------VYMVMVKC 253
Query: 306 LQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
+ RP+ K L R+ + P + E
Sbjct: 254 WMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEE 308
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 33/265 (12%)
Query: 86 VYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYCC 136
V++G + + VA +F +EA + + + LIG
Sbjct: 406 VHQGIYMSPE----NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VI 460
Query: 137 AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DL 195
+ ++ E L L K +++ + A+ ++ AL Y E + H D+
Sbjct: 461 TENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAY--LESKRFVHRDI 517
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYS 250
A VL + +L FGL + D Y + + PE + R S ++
Sbjct: 518 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 577
Query: 251 FGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQ 307
FG + ++L P + + + + + L + L ++C
Sbjct: 578 FGVCMWEILMHGVKPFQ----GVKNNDVIGRIENGERLP---MPPNCPPTLYSLMTKCWA 630
Query: 308 YEPRERPSTKNLVVTLARLQTKSDV 332
Y+P RP L L+ + + +
Sbjct: 631 YDPSRRPRFTELKAQLSTILEEEKL 655
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQ 459
E + Q + F+ KD++ AI +YSQ I +N + Y RSL +L ++ AL DA +
Sbjct: 7 EELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATR 65
Query: 460 AQCAHPDWPTAFYMQSVALSKLDMQKDA 487
A + +Y ++ + L + A
Sbjct: 66 AIELDKKYIKGYYRRAASNMALGKFRAA 93
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 3e-09
Identities = 37/275 (13%), Positives = 65/275 (23%), Gaps = 49/275 (17%)
Query: 85 VVYKGR-LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGYC----- 135
VV+ R +E + A+K FT A + + E +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 136 ---------------------CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVA 174
A LL+ D +
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 175 FYI----AEALDYCNTEGRPLYH-DL---NAYRVLFDEDGDPRLSCFGL-MKNSMDGKSY 225
+ ++G L H N + DG L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 226 STNLAYTPPEYLKNGRVI--PESVIYSFGTVLLDLLSGK---HIPPSHALDMIRGENLNL 280
S + Y P E+L + G + + + + +L +
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS 315
L + V L + L ++ R R
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL 346
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 47/284 (16%)
Query: 86 VYKGRLEN-----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V + + +AVK A P + +K+E + + L + + G C
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 140 ER--LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLN 196
LV EY+P +L +L + +I L A I E + Y + H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAY--LHAQHYIHRDLA 161
Query: 197 AYRVLFDEDGDPRLSCFGLMKNSMDGKSY---STN----LAYTPPEYLKNGRVIPESVIY 249
A VL D D ++ FGL K +G Y + + + PE LK + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 250 SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV---------- 299
SFG L +LL+ S + + +G+ + T+++
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIA-------QGQMTVLRLTELLERGERLPRPD 274
Query: 300 -------GLASQCLQYEPRERPSTKNLVVTLARL--QTKSDVPS 334
L C + E RP+ +NL+ L + + + PS
Sbjct: 275 KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 16/181 (8%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVL 201
+ E+ TL + + + ++ L L + I + +DY +++ L + DL +
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 202 FDEDGDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDL 258
+ ++ FGL +KN L Y PE + + E +Y+ G +L +L
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 259 LSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKN 318
L A + + L D + F +E T L + L +P +RP+T
Sbjct: 215 LH----VCDTAFET--SKFFTDLRDGIISDIFDKKEKT----LLQKLLSKKPEDRPNTSE 264
Query: 319 L 319
+
Sbjct: 265 I 265
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-09
Identities = 53/285 (18%), Positives = 108/285 (37%), Gaps = 53/285 (18%)
Query: 85 VVYKGRLE-----NRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLIGYCCAG 138
V R + + +AVKK + + + + F+ E E + L+ + G C +
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 114
Query: 139 DER--LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DL 195
R L+ EY+P +L +L K+ I+ L+ I + ++Y + H DL
Sbjct: 115 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY--LGTKRYIHRDL 171
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY------------TPPEYLKNGRVI 243
+L + + ++ FGL K K Y Y PE L +
Sbjct: 172 ATRNILVENENRVKIGDFGLTKVLPQDKEY-----YKVKEPGESPIFWYAPESLTESKFS 226
Query: 244 PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV---- 299
S ++SFG VL +L + S + +R ++ + +G+ +++
Sbjct: 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMR------MIGNDKQGQMIVFHLIELLKNNG 280
Query: 300 -------------GLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331
+ ++C +RPS ++L + + +++ +
Sbjct: 281 RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 5e-09
Identities = 44/201 (21%), Positives = 73/201 (36%), Gaps = 38/201 (18%)
Query: 134 YCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY-IAEALDYC---NTEGR 189
YC GD +A + T + E+ + + AL C + G
Sbjct: 88 YCEGGD----LASVITKGTKERQYLD-EEFVLRV-------MTQLTLALKECHRRSDGGH 135
Query: 190 PLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIP 244
+ H DL V D + +L FGL + S++ TP PE +
Sbjct: 136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNE 195
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS------SEEATQV 298
+S I+S G +L +L + PP + L EGKF S+E ++
Sbjct: 196 KSDIWSLGCLLYELCALM--PP------FTAFSQKELAGKIREGKFRRIPYRYSDELNEI 247
Query: 299 VGLASQCLQYEPRERPSTKNL 319
+ ++ L + RPS + +
Sbjct: 248 I---TRMLNLKDYHRPSVEEI 265
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 47/207 (22%)
Query: 143 LVAEYMPNDTLAKHL----FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+ EY N TL + + ++ R+ I EAL Y +++G + H DL
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRDEY-----WRLFRQILEALSYIHSQG--IIHRDLKP 144
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------------------YTPPEYLKN 239
+ DE + ++ FGL KN + Y E L
Sbjct: 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
Query: 240 GRVIPESV-IYSFGTVLLDLLSGKHIPPSHA------LDMIRGENLNLLMDSHLEGKFSS 292
E + +YS G + +++ P S L +R ++ +
Sbjct: 205 TGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEF--PPDFDDNKMK 258
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNL 319
E + + ++P +RP + L
Sbjct: 259 VEK----KIIRLLIDHDPNKRPGARTL 281
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 53/288 (18%), Positives = 107/288 (37%), Gaps = 61/288 (21%)
Query: 85 VVYKGRLE-----NRQWIAVKKFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLIGYCCAG 138
V R + + +AVKK + + + + F+ E E + L+ + G C +
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 83
Query: 139 DER--LLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
R L+ EY+P D L KH K+ I+ L+ I + ++Y +
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGMEY--LGTKRYI 136
Query: 193 H-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY------------TPPEYLKN 239
H DL +L + + ++ FGL K K + + PE L
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTE 191
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299
+ S ++SFG VL +L + S + +R ++ + +G+ +++
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR------MIGNDKQGQMIVFHLIELL 245
Query: 300 -----------------GLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
+ ++C +RPS ++L + + +++
Sbjct: 246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 46/276 (16%), Positives = 87/276 (31%), Gaps = 46/276 (16%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
IV K + E + + T P+ + + ++ N +
Sbjct: 65 GIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV 124
Query: 133 GYCCAGDERLL---VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY----IAEALDYCN 185
G ++ + + L + ++ V + IAEA+++ +
Sbjct: 125 GQLQPSSPKVYLYIQMQLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 186 TEGRPLYH-DL---NAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA----------- 230
++G L H DL N + F D ++ FGL+ + T L
Sbjct: 182 SKG--LMHRDLKPSN---IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ 236
Query: 231 -----YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285
Y PE + + I+S G +L +LL S M R + + +
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL----YSFSTQ--MERVRIITDVRNLK 290
Query: 286 LEGKFS--SEEATQVVGLASQCLQYEPRERPSTKNL 319
F+ + +V L P ERP ++
Sbjct: 291 FPLLFTQKYPQEHMMV---QDMLSPSPTERPEATDI 323
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 66/331 (19%), Positives = 111/331 (33%), Gaps = 71/331 (21%)
Query: 86 VYKGRL----ENRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAGD 139
V GRL + +A+K KV + + + F EA +G+ + L G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
++V EYM N +L L + + IA + Y H DL A
Sbjct: 120 PVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKY--LSDMGYVHRDLAAR 176
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKS--YSTNLA-----YTPPEYLKNGRVIPESVIYSF 251
+L + + ++S FGL + D Y+T +T PE + + S ++S+
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 252 GTVLLDLLSGKHIP-----PSHALDMI-RG----------ENLNLLMDSHLEGKFSSEEA 295
G VL +++S P + + G L LM
Sbjct: 237 GIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM------------- 283
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLS 355
C Q + RP + +V L +L + S RP +
Sbjct: 284 -------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSL----------KIITSAAARPSN 326
Query: 356 PLAEACSRMDLTAIHQI------LVMAHYRD 380
L + S +D+T + AH ++
Sbjct: 327 LLLD-QSNVDITTFRTTGDWLNGVWTAHCKE 356
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 33/266 (12%)
Query: 85 VVYKGRL-----ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
VYKG + + +A+K+ + P + +EA + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
L+ + MP L ++ K I L IA+ ++Y E R L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNY--LEDRRLVHRDLAA 145
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSF 251
VL +++ FGL K + + + E + + +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 252 GTVLLDLLS-GKH----IPPSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
G + +L++ G IP S ++ +GE L ++ V + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID----------VYMIMVKC 255
Query: 306 LQYEPRERPSTKNLVVTLARLQTKSD 331
+ RP + L++ +++
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDPQ 281
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 56/287 (19%), Positives = 92/287 (32%), Gaps = 60/287 (20%)
Query: 86 VYKGRL-----ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
V R +AVK+ F+ E + + L + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 141 R--LLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH- 193
+ LV EY+P+ D L +H + ++ L + I + ++Y R H
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRH-----RARLDASRLLLYSSQICKGMEY--LGSRRCVHR 151
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY------------TPPEYLKNGR 241
DL A +L + + +++ FGL K K Y Y PE L +
Sbjct: 152 DLAARNILVESEAHVKIADFGLAKLLPLDKDY-----YVVREPGQSPIFWYAPESLSDNI 206
Query: 242 VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV-- 299
+S ++SFG VL +L + S L M + +++
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDKSCS-------PSAEFLRMMGCERDVPALSRLLELLEE 259
Query: 300 ---------------GLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331
L C P++RPS L L L + S
Sbjct: 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 50/269 (18%), Positives = 98/269 (36%), Gaps = 35/269 (13%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-------CA 137
V L + + A+K+ D + + EA+ N++ A
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHP---NILRLVAYCLRERGA 101
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR--LRVAFYIAEALDYCNTEGRPLYH-D 194
E L+ + TL + + + L + I L+ + + H D
Sbjct: 102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA--KGYAHRD 159
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNS-------------MDGKSYSTNLAYTPPE--YLKN 239
L +L ++G P L G M + D + ++Y PE +++
Sbjct: 160 LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219
Query: 240 GRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
VI E ++S G VL ++ G+ P + +G+++ L + + L S ++ +
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEG--PYDMVFQ-KGDSVALAVQNQLSIPQSPRHSSAL 276
Query: 299 VGLASQCLQYEPRERPSTKNLVVTLARLQ 327
L + + +P +RP L+ L LQ
Sbjct: 277 WQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 53/260 (20%), Positives = 94/260 (36%), Gaps = 32/260 (12%)
Query: 85 VVYKGRLENRQW---IAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
V +G R+ +A+K + D + EA+ + +L + LIG C +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYR 199
+LV E L K L +++ I + ++ + Y E + H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKY--LEEKNFVHRNLAARN 466
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTPPEYLKNGRVIPESVIYSFG 252
VL ++S FGL K SY T L + PE + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 253 TVLLDLLSGKHIP-----PSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306
+ + LS P + I +G+ + + E + L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE----------LYALMSDCW 576
Query: 307 QYEPRERPSTKNLVVTLARL 326
Y+ +RP + +
Sbjct: 577 IYKWEDRPDFLTVEQRMRAC 596
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 4e-08
Identities = 47/260 (18%), Positives = 90/260 (34%), Gaps = 33/260 (12%)
Query: 85 VVYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYC 135
V++G + + VA +F +EA + + + LIG
Sbjct: 30 DVHQGIYMSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-V 84
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-D 194
+ ++ E L L K +++ + A+ ++ AL Y E + H D
Sbjct: 85 ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAY--LESKRFVHRD 141
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIY 249
+ A VL + +L FGL + D Y + + PE + R S ++
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 201
Query: 250 SFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCL 306
FG + ++L P + + + + + L + L ++C
Sbjct: 202 MFGVCMWEILMHGVKPFQ----GVKNNDVIGRIENGERLP---MPPNCPPTLYSLMTKCW 254
Query: 307 QYEPRERPSTKNLVVTLARL 326
Y+P RP L L+ +
Sbjct: 255 AYDPSRRPRFTELKAQLSTI 274
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 4e-08
Identities = 46/231 (19%), Positives = 86/231 (37%), Gaps = 29/231 (12%)
Query: 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202
+V +Y L K + + + L I AL + + + + L+ D+ + +
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH-DRKILHRDIKSQNIFL 158
Query: 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGTVLLDL 258
+DG +L FG+ + + TP PE +N +S I++ G VL +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 259 LSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS------SEEATQVVGLASQCLQYEPRE 312
+ K A ++ L+ + G F S + +V SQ + PR+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLV---SQLFKRNPRD 267
Query: 313 RPSTKNL------VVTLARLQTKSDVPSNVMLR-VSKHEEAQSTPQRPLSP 356
RPS ++ + + + + L+ SK +RP S
Sbjct: 268 RPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASG 318
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-08
Identities = 19/98 (19%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
+ +G+ + ++F+ A+ +Y + I +N + + R+ + A+ D +A
Sbjct: 14 RLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLGNYAGAVQDCERA 72
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
C P + A+ +ALS L+ +A + L+
Sbjct: 73 ICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 61/288 (21%), Positives = 109/288 (37%), Gaps = 33/288 (11%)
Query: 86 VYKGRLENRQW-----IAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAG 138
VYKG L+ +A+K K + + + F EA +G+ + L G
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+++ EYM N L K L + + + IA + Y H DL A
Sbjct: 119 KPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKY--LANMNYVHRDLAA 175
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKS--YSTNLA-----YTPPEYLKNGRVIPESVIYS 250
+L + + ++S FGL + D Y+T+ +T PE + + S ++S
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235
Query: 251 FGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVV-GLASQCLQ 307
FG V+ ++++ P ++ E + + D L + + + L QC Q
Sbjct: 236 FGIVMWEVMTYGERPYW----ELSNHEVMKAINDGFRLP---TPMDCPSAIYQLMMQCWQ 288
Query: 308 YEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHEEAQSTPQRPLS 355
E RP ++V L +L D + ++ + S S
Sbjct: 289 QERARRPKFADIVSILDKLIRAPD----SLKTLADFDPRVSIRLPSTS 332
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 51/262 (19%), Positives = 89/262 (33%), Gaps = 51/262 (19%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEG-VGKLRR-KRLANLIGYCCAGDERL 142
+VY+G +NR +AVK+ + A+ V LR N+I Y C +R
Sbjct: 40 IVYRGMFDNRD-VAVKRILP-------ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQ 91
Query: 143 ---LVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFY-IAEALDYCNTEGRPLYH-DL 195
+ E L + +K L L + ++ + H DL
Sbjct: 92 FQYIAIELCAAT-----LQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDL 144
Query: 196 NAYRVLFDEDGD-----PRLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLK---NG 240
+ +L +S FGL K G+ + + + PE L
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE 204
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
I+S G V ++S P A ++ +L+ L K A
Sbjct: 205 NPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE----KHEDVIA 260
Query: 296 TQVVGLASQCLQYEPRERPSTK 317
+++ + + +P++RPS K
Sbjct: 261 RELI---EKMIAMDPQKRPSAK 279
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-08
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 390 QEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVN--IMVSPTVYARRSLCHLFS 447
+ T + + RK+G+ F+ D+ A+ Y+Q + ++ ++ R+ CHL
Sbjct: 19 RPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKL 78
Query: 448 DRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
+ D A +A +A A Y +S AL KL A L +LE
Sbjct: 79 EDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-08
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
EAR +G F D+ A+ Y++ I Y+ R+ A+ D +A
Sbjct: 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKA 64
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
P++ A+ ++ A + A + L +
Sbjct: 65 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 6e-08
Identities = 78/545 (14%), Positives = 157/545 (28%), Gaps = 163/545 (29%)
Query: 8 FLKE--TQRERDEVMNERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFLDLRAA 65
K ++ E D ++ + + + VQ F++
Sbjct: 41 MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ------------KFVEEVLR 88
Query: 66 TN-NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTK--VAWPDP-TQFKEEAE--- 118
N F I +E + + +R + + F K V+ P + ++
Sbjct: 89 INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148
Query: 119 -----------GVGK-------LRRKRLANL---------IGYCCAGDERL-----LVAE 146
G GK ++ + C + + L L+ +
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 147 YMPNDT-LAKHLFHWEKQTIEWPLRLRVAF----YIAEAL----DYCNTEGRPLYHDLNA 197
PN T + H + + + LR Y L + N + NA
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCLLVLLNVQNAK------AWNA 261
Query: 198 YRVLFDEDGDPRLSCFGLM-------KNSMDGKSYS------TNLAYTPPEYLK------ 238
F+ LSC L+ + + + + ++ TP E
Sbjct: 262 ----FN------LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 239 NGRV--IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEE 294
+ R +P V+ P L +I E++ + + + ++
Sbjct: 312 DCRPQDLPREVL-------------TTNP--RRLSII-AESIR-DGLATWDNWKHVNCDK 354
Query: 295 ATQVVGLASQCLQYEPRE-RPSTKNLVV----------TLARL--QTKSDVPSNVMLRVS 341
T ++ + L EP E R L V L+ + V+ ++
Sbjct: 355 LTTIIESSLNVL--EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 342 KHEEAQSTPQRPLSP-----LAEACSRMDLTAIHQILVMAHYRDDK--ETHELSFQEWTQ 394
K+ + P+ L + A+H+ +V HY K ++ +L Q
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV-DHYNIPKTFDSDDLIPPYLDQ 471
Query: 395 --------QMRDMLEARKQGDTAFRDK--DFKTAIDYYSQFINVNIMVSPTVY-ARRSLC 443
++++ + T FR DF+ F+ I T + A S+
Sbjct: 472 YFYSHIGHHLKNIEHPER--MTLFRMVFLDFR--------FLEQKIRHDSTAWNASGSIL 521
Query: 444 HLFSD 448
+
Sbjct: 522 NTLQQ 526
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 38/270 (14%), Positives = 70/270 (25%), Gaps = 75/270 (27%)
Query: 249 YSFGTVLLDLLSG--KHIPPSHALDMIRG-----------------ENLNLLMDSHLEGK 289
Y + +L + DM + L + L K
Sbjct: 16 YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT-LLSK 74
Query: 290 FSSEEATQVVG---------LASQCLQYEPRERPS--TKNLVVTLARLQTKSDV--PSNV 336
E + V L S ++ E R+ PS T+ + RL + V NV
Sbjct: 75 -QEEMVQKFVEEVLRINYKFLMSP-IKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 337 MLRVSKHEEAQSTPQRPLSPLAEACSRMDLTAIH-------QILVMAHYRDDKETHELSF 389
R+ + + + L P I + + K ++ F
Sbjct: 132 S-RLQPYLKLRQALLE-LRP-------AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 390 Q-EW---TQQMRDMLEARKQGDTAFR-DKDFKTAIDYYSQFINVNIMVSPTVYARRSLCH 444
+ W ++ D ++ + D+ S NI + + L
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS-----NIKL-RIHSIQAELRR 236
Query: 445 LFSDRS------------DAALLDAMQAQC 462
L + +A +A C
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 51/264 (19%), Positives = 102/264 (38%), Gaps = 28/264 (10%)
Query: 86 VYKGRL----ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
VY G +NR A+K +++ F E + L + LIG +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 141 RLL-VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
+ YM + L + + ++ + +A ++Y + H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEY--LAEQKFVHRDLAAR 153
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA--------YTPPEYLKNGRVIPESVIYS 250
+ DE +++ FGL ++ +D + YS +T E L+ R +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 251 FGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEG-KFSSEEATQVVGLASQCLQ 307
FG +L +LL+ P + + + L L ++ + + + QC +
Sbjct: 214 FGVLLWELLTRGAPPYR----HIDPFDLTHFLAQGRRLPQPEYCPDS---LYQVMQQCWE 266
Query: 308 YEPRERPSTKNLVVTLARLQTKSD 331
+P RP+ + LV + ++ +
Sbjct: 267 ADPAVRPTFRVLVGEVEQIVSALL 290
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 60/281 (21%), Positives = 97/281 (34%), Gaps = 57/281 (20%)
Query: 86 VYKGRLE-----NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V R + + +AVK + K+E E + L + + G C D
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKG-ICTED 95
Query: 140 ER---LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DL 195
L+ E++P+ +L ++L K I +L+ A I + +DY R H DL
Sbjct: 96 GGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDY--LGSRQYVHRDL 152
Query: 196 NAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY------------TPPEYLKNGRVI 243
A VL + + ++ FGL K K Y Y PE L +
Sbjct: 153 AARNVLVESEHQVKIGDFGLTKAIETDKEY-----YTVKDDRDSPVFWYAPECLMQSKFY 207
Query: 244 PESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV--- 299
S ++SFG L +LL+ L L M G+ + +
Sbjct: 208 IASDVWSFGVTLHELLTYCDSDSS--------PMALFLKMIGPTHGQMTVTRLVNTLKEG 259
Query: 300 --------------GLASQCLQYEPRERPSTKNLVVTLARL 326
L +C +++P R S +NL+ L
Sbjct: 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 35/196 (17%)
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGR 189
Y +RL V EY L HL E+ E R FY AE ALDY ++E
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHL-SRERVFSED----RARFYGAEIVSALDYLHSEKN 269
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIY 249
+Y DL ++ D+DG +++ FGL K + + T PEYL PE +
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT-PEYLA-----PEVLED 323
Query: 250 ----------SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEEATQ 297
G V+ +++ G+ P ++ L + L + F +
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEIRFPRTLGPE 375
Query: 298 VVGLASQCLQYEPRER 313
L S L+ +P++R
Sbjct: 376 AKSLLSGLLKKDPKQR 391
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 53/285 (18%), Positives = 93/285 (32%), Gaps = 64/285 (22%)
Query: 86 VYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYCC 136
VY+G + + + T+VA + +F EA + + + L+G
Sbjct: 41 VYEGVAKG--VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
Query: 137 AGDERLLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLR----VAFYIAEALDYCNTEG 188
G L++ E M L + P L +A IA+ + Y
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY--LNA 156
Query: 189 RPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGR 241
H DL A + ED ++ FG+ ++ + Y + PE LK+G
Sbjct: 157 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV 216
Query: 242 VIPESVIYSFGTVLLDLLS-GKH----IPPSHALDMIRG-----------ENLNLLMDSH 285
S ++SFG VL ++ + + + L + + L LM
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELM--- 273
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
C QY P+ RPS ++ ++
Sbjct: 274 -----------------RMCWQYNPKMRPSFLEIISSIKEEMEPG 301
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 54/262 (20%), Positives = 96/262 (36%), Gaps = 36/262 (13%)
Query: 85 VVYKGRLENRQW---IAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGYCCAG 138
V KG + ++ +AVK K DP EA + +L + +IG C
Sbjct: 32 TVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 89
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+ +LV E L K+L + + ++ + + ++ + Y E H DL A
Sbjct: 90 ESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKY--LEESNFVHRDLAA 145
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTPPEYLKNGRVIPESVIYS 250
VL ++S FGL K ++Y + + PE + + +S ++S
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205
Query: 251 FGTVLLDLLSGKHIP-----PSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304
FG ++ + S P S M+ +GE + E + L +
Sbjct: 206 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE----------MYDLMNL 255
Query: 305 CLQYEPRERPSTKNLVVTLARL 326
C Y+ RP + + L
Sbjct: 256 CWTYDVENRPGFAAVELRLRNY 277
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 61/269 (22%), Positives = 90/269 (33%), Gaps = 38/269 (14%)
Query: 85 VVYKGRL----ENRQWIAVK--KFTKVAWPDPTQ-FKEEAEGVGKLRRKRLANLIGYCCA 137
VV +G +AVK K ++ P+ F E + L + L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLN 196
+V E P +L L + R A +AE + Y E + H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY--LESKRFIHRDLA 148
Query: 197 AYRVLFDEDGDPRLSCFGLMKN-SMDGKSYSTN------LAYTPPEYLKNGRVIPESVIY 249
A +L ++ FGLM+ + Y A+ PE LK S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 250 SFGTVLLDLLSGKHIP-----PSHALDMI--RGENLNLLMDSHLEGKFSSEEATQVV-GL 301
FG L ++ + P S L I GE L D Q + +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED-----------CPQDIYNV 257
Query: 302 ASQCLQYEPRERPSTKNLVVTLARLQTKS 330
QC ++P +RP+ L L Q
Sbjct: 258 MVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 53/278 (19%), Positives = 103/278 (37%), Gaps = 37/278 (13%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEG-VGKLRRKRLANLIGY--CCAGDER 141
VY+ L + +A+KK D + + + + L++ N+I Y D
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDA-KARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 106
Query: 142 L-LVAEYMPNDTLAKHL--FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
L +V E L++ + F +K+ I + + AL++ ++ + H D+
Sbjct: 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKP 164
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIYSFGT 253
V G +L GL + + + +L TP PE + +S I+S G
Sbjct: 165 ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGC 224
Query: 254 VLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-------SEEATQVVGLASQCL 306
+L ++ + + P + M NL L + + SEE Q+V + C+
Sbjct: 225 LLYEMAALQ--SPFYGDKM----NLYSLCKKIEQCDYPPLPSDHYSEELRQLV---NMCI 275
Query: 307 QYEPRERPSTKNLVVTLARLQTKSDVPSNVMLRVSKHE 344
+P +RP + + + + H
Sbjct: 276 NPDPEKRPDVTYV------YDVAKRMHACTASSLEHHH 307
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 30/264 (11%), Positives = 73/264 (27%), Gaps = 43/264 (16%)
Query: 85 VVYKGR------LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA- 137
VY+ +N+Q +K +P +F + + +L+ + + A
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136
Query: 138 --GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEG---- 188
+ +LV E TL + ++ + + V + ++ +
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196
Query: 189 --RP----LYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN---LAYTPPEY 236
+P L + D L G MK G ++ + E
Sbjct: 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM 256
Query: 237 LKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
L + + + + + +L G ++ ++ E + +
Sbjct: 257 L-SNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDMW 308
Query: 296 TQVVGLASQCLQYEPRERPSTKNL 319
+ L + +L
Sbjct: 309 NEFF---HVMLNIPDCHHLPSLDL 329
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 23/149 (15%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---NLAYT 232
I A+ YC+ + + H DL A +L D D + +++ FG G Y
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 233 PPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291
PE + + PE ++S G +L L+SG +P G+NL L + L GK+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKYR 232
Query: 292 -----SEEATQVVGLASQCLQYEPRERPS 315
S + L + L P +R +
Sbjct: 233 IPFYMSTDCEN---LLKRFLVLNPIKRGT 258
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-07
Identities = 59/279 (21%), Positives = 101/279 (36%), Gaps = 41/279 (14%)
Query: 86 VYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRR-KRLANLIGYC 135
V + TKVA D + E E + + + K + NL+G C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 136 CAGDERLLVAEYMPNDTLAKHL----------FHWEKQTIEWPLRLR----VAFYIAEAL 181
++ EY L ++L + E L + A+ +A +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 182 DYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPP 234
+Y + H DL A VL ED +++ FGL ++ Y + + P
Sbjct: 205 EY--LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 235 EYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLEGKFSSE 293
E L + +S ++SFG +L ++ + P P ++ E LL + H K
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----ELFKLLKEGHRMDK--PS 316
Query: 294 EATQVV-GLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331
T + + C P +RP+ K LV L R+ +
Sbjct: 317 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 41/194 (21%), Positives = 69/194 (35%), Gaps = 31/194 (15%)
Query: 146 EYMPNDTLAKHLFHWEKQT-IEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAYRVLFD 203
+ + L + E + L + IAEA+++ +++G L H DL + F
Sbjct: 95 QLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFT 152
Query: 204 EDGDPRLSCFGL---MKNSMDGKSYSTNLA-------------YTPPEYLKNGRVIPESV 247
D ++ FGL M + ++ T + Y PE + +
Sbjct: 153 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVD 212
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS--SEEATQVVGLASQC 305
I+S G +L +LL P S M R L + + F+ +V
Sbjct: 213 IFSLGLILFELL----YPFSTQ--MERVRTLTDVRNLKFPPLFTQKYPCEYVMV---QDM 263
Query: 306 LQYEPRERPSTKNL 319
L P ERP N+
Sbjct: 264 LSPSPMERPEAINI 277
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-07
Identities = 15/112 (13%), Positives = 38/112 (33%), Gaps = 1/112 (0%)
Query: 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALL 455
M + ++QG++ F+ ++ A+ Y Q I +P Y+ +++ + A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQ 59
Query: 456 DAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGARA 507
Q + Q + + ++E + R+
Sbjct: 60 MCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDELPEGYDRS 111
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 54/277 (19%), Positives = 90/277 (32%), Gaps = 54/277 (19%)
Query: 85 VVYKGRL----ENRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCCAG 138
V GRL + +A+K K + + + F EA +G+ + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
++V EYM N +L L + + + + Y H DL A
Sbjct: 123 RLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLVGMLRGVGAGMRY--LSDLGYVHRDLAA 179
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-------YTPPEYLKNGRVIPESVIYS 250
VL D + ++S FGL + D + +T PE + S ++S
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 251 FGTVLLDLLSGKHIP-P----SHALDMI-RG----------ENLNLLMDSHLEGKFSSEE 294
FG V+ ++L+ P + + G L+ LM
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM------------ 287
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331
C + +RP +V L L +
Sbjct: 288 --------LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 55/285 (19%), Positives = 93/285 (32%), Gaps = 60/285 (21%)
Query: 86 VYKGRLENRQW------IAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
VY+G++ +AVK +V D F EA + K + + IG
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 139 DERLLVAEYMPNDTLAKHL-----FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
R ++ E M L L + ++ L VA IA Y E H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY--LEENHFIH 163
Query: 194 -DLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVI 243
D+ A L G R++ FG+ ++ Y + PPE G
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 244 PESVIYSFGTVLLDLLS-GKH----IPPSHALDMIRG-----------ENLNLLMDSHLE 287
++ +SFG +L ++ S G L+ + + +M
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM----- 278
Query: 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332
+QC Q++P +RP+ ++ + DV
Sbjct: 279 ---------------TQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 54/265 (20%), Positives = 92/265 (34%), Gaps = 42/265 (15%)
Query: 85 VVYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYC 135
V +G + KK VA D + EA+ + +L + LIG
Sbjct: 25 SVRQGV-----YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-V 78
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-D 194
C + +LV E L K L +++ I + ++ + Y E + H D
Sbjct: 79 CQAEALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKY--LEEKNFVHRD 135
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTPPEYLKNGRVIPESV 247
L A VL ++S FGL K SY T L + PE + + S
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 195
Query: 248 IYSFGTVLLDLLSGKHIP-----PSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGL 301
++S+G + + LS P + I +G+ + + ++ L
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC----------PPELYAL 245
Query: 302 ASQCLQYEPRERPSTKNLVVTLARL 326
S C Y+ +RP + +
Sbjct: 246 MSDCWIYKWEDRPDFLTVEQRMRAC 270
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 56/304 (18%), Positives = 97/304 (31%), Gaps = 43/304 (14%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA------- 137
VY+ + + + + A+K+ +E + KL N++ +C A
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP--NIVQFCSAASIGKEE 101
Query: 138 ---GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY-IAEALDYCNTEGRPLYH 193
G L+ + L + L E + + FY A+ + + + P+ H
Sbjct: 102 SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIH 161
Query: 194 -DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----------------LAYTPPE- 235
DL +L G +L FG YS + Y PE
Sbjct: 162 RDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEI 221
Query: 236 -YLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293
L + I E I++ G +L L +H P +R N + H +
Sbjct: 222 IDLYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLRIVNGKYSIPPHD--TQYTV 277
Query: 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV-PSNVMLRVSKHEEAQSTPQR 352
L LQ P ER S +V L + +V P + + + + +
Sbjct: 278 ----FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATL 333
Query: 353 PLSP 356
P
Sbjct: 334 SRGP 337
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 53/288 (18%), Positives = 95/288 (32%), Gaps = 65/288 (22%)
Query: 86 VYKGRLEN------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V+ N + +AVK F+ EAE + L+ + + G C GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 140 ERLLVAEYMPN--------------DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN 185
++V EYM + L K + L +A IA + Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVY-- 148
Query: 186 TEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLK 238
+ H DL L + ++ FG+ ++ Y + PPE +
Sbjct: 149 LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 208
Query: 239 NGRVIPESVIYSFGTVLLDLLS-GKH----IPPSHALDMIRG-----------ENLNLLM 282
+ ES ++SFG +L ++ + GK + + ++ I + + +M
Sbjct: 209 YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVM 268
Query: 283 DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
C Q EP++R + K + L L +
Sbjct: 269 --------------------LGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 50/268 (18%), Positives = 94/268 (35%), Gaps = 39/268 (14%)
Query: 85 VVYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYC 135
VY+G N + + VA + +F EA + L + LIG
Sbjct: 27 EVYEGVYTNHK----GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-I 81
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-D 194
+ ++ E P L +L K +++ + + I +A+ Y E H D
Sbjct: 82 IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAY--LESINCVHRD 138
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIY 249
+ +L +L FGL + D Y ++ + PE + R S ++
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 198
Query: 250 SFGTVLLDLLSGKHIP-----PSHALDMI-RGENLNLLMDSHLEGKFSSEEATQVVGLAS 303
F + ++LS P + ++ +G+ L + L +
Sbjct: 199 MFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----------PPVLYTLMT 248
Query: 304 QCLQYEPRERPSTKNLVVTLARLQTKSD 331
+C Y+P +RP LV +L+ +
Sbjct: 249 RCWDYDPSDRPRFTELVCSLSDVYQMEK 276
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 52/280 (18%), Positives = 82/280 (29%), Gaps = 66/280 (23%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEG-VGKLRR-KRLANLIGYCCA---GD 139
VV++G + R AVK+ F + A + L N+I Y C+
Sbjct: 31 VVFQGSFQGRPV-AVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRYYCSETTDR 82
Query: 140 ERLLVAEYMP---NDTLAKHLFHWEKQTIEWPLRLRVAFY-IAEALDYCNTEGRPLYHDL 195
+ E D + E ++ IA + + H L
Sbjct: 83 FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL--------HSL 134
Query: 196 N--------------------AYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA----- 230
A + E+ +S FGL K G+S
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 231 ---YTPPEYLKNGRVIPESV-------IYSFGTVLLDLLSGKHIPPSHALDM---IRGEN 277
+ PE L+ + I+S G V +LS P I
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 254
Query: 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTK 317
+L L + EAT L SQ + ++P +RP+
Sbjct: 255 FSLDEMKCLHDRSLIAEATD---LISQMIDHDPLKRPTAM 291
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 54/272 (19%)
Query: 86 VYKGRL----ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
VY G L + AVK ++ + +QF E + + +L+G C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 141 -RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
L+V YM + L + E + +A+ + Y + H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKY--LASKKFVHRDLAAR 157
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAY--------TPPEYLKNGRVIPESVIYS 250
+ DE +++ FGL ++ D + YS + E L+ + +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 251 FGTVLLDLLS-GK----HIPPSHALDMIRG-----------ENLNLLMDSHLEGKFSSEE 294
FG +L +L++ G + + + L +M
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVM------------ 265
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+C + RPS LV ++ +
Sbjct: 266 --------LKCWHPKAEMRPSFSELVSRISAI 289
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 54/288 (18%), Positives = 98/288 (34%), Gaps = 61/288 (21%)
Query: 86 VYKGRLENRQW----IAVK--KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V + +L+ +AVK K +A D +F EA + + +A L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 140 ER------LLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGR 189
+ +++ +M + L + +R IA ++Y R
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY--LSSR 156
Query: 190 PLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRV 242
H DL A + ED ++ FGL + G Y A + E L +
Sbjct: 157 NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLY 216
Query: 243 IPESVIYSFGTVLLDLLS-GK----HIPPSHALDMIRG-----------ENLNLLMDSHL 286
S +++FG + ++++ G+ I + + + G E + LM
Sbjct: 217 TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLM---- 272
Query: 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPS 334
QC +P++RPS L + L + V S
Sbjct: 273 ----------------YQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 50/254 (19%), Positives = 98/254 (38%), Gaps = 28/254 (11%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA 137
GE + +V R + + +AVK E + + + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 138 GDERLLVAEYMP----NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
G+E ++ E++ D +++ + E+Q I + +AL Y + +G ++
Sbjct: 114 GEELWVLMEFLQGGALTDIVSQVRLN-EEQ-IATVCE-----AVLQALAYLHAQGV-IHR 165
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +LS FG +L TP PE + E I+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
S G ++++++ G+ P A+ +R L +SH K S + +
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSH---KVSPV----LRDFLERM 278
Query: 306 LQYEPRERPSTKNL 319
L +P+ER + + L
Sbjct: 279 LVRDPQERATAQEL 292
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 43/198 (21%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+ +L L+ +Y+ L HL E+ T V Y+ E AL++ H
Sbjct: 131 ETKLHLILDYINGGELFTHLSQRERFTEH-----EVQIYVGEIVLALEH--------LHK 177
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRV 242
L YR +L D +G L+ FGL K + ++ + Y P+ ++ G
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS 237
Query: 243 IPESVI--YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSSEEA 295
+ + +S G ++ +LL+G P + + L+ + S A
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGA--SPFTVDG--EKNSQAEISRRILKSEPPYPQEMSALA 293
Query: 296 TQVVGLASQCLQYEPRER 313
L + L +P++R
Sbjct: 294 ---KDLIQRLLMKDPKKR 308
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 42/190 (22%), Positives = 69/190 (36%), Gaps = 22/190 (11%)
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGR 189
Y ++L + + M L HL + + FY AE L++ +
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNRF- 312
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS---TNLAYTPPEYLKNGRVIPES 246
+Y DL +L DE G R+S GL + K ++ T+ Y PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH-GYMAPEVLQKGVAYDSS 371
Query: 247 VIY-SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEEATQVVGLAS 303
+ S G +L LL G P ++ + + L + ++ L
Sbjct: 372 ADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 304 QCLQYEPRER 313
LQ + R
Sbjct: 427 GLLQRDVNRR 436
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 55/285 (19%), Positives = 93/285 (32%), Gaps = 60/285 (21%)
Query: 86 VYKGRLENRQW------IAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
VY+G++ +AVK +V D F EA + K + + IG
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 139 DERLLVAEYMPNDTLAKHL-FHWEKQTIEWPLRLR----VAFYIAEALDYCNTEGRPLYH 193
R ++ E M L L + + L + VA IA Y E H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY--LEENHFIH 204
Query: 194 -DLNAYRVLFDEDGDPRLSC---FGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVI 243
D+ A L G R++ FG+ ++ Y + PPE G
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT 264
Query: 244 PESVIYSFGTVLLDLLS-GKH----IPPSHALDMIRG-----------ENLNLLMDSHLE 287
++ +SFG +L ++ S G L+ + + +M
Sbjct: 265 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM----- 319
Query: 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332
+QC Q++P +RP+ ++ + DV
Sbjct: 320 ---------------TQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 21/145 (14%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLFD-EDGDPRLSCFGLMKNSMDGKSYST---NLAY 231
+ A+ +C++ G + H D+ +L D G +L FG + + Y+ Y
Sbjct: 148 VVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGS-GALLHDEPYTDFDGTRVY 204
Query: 232 TPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
+PPE++ + + ++S G +L D++ G IP +++ E L +H+
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCG-DIPFERDQEILEAE---LHFPAHV---- 256
Query: 291 SSEEATQVVGLASQCLQYEPRERPS 315
S + L +CL +P RPS
Sbjct: 257 -SPDCCA---LIRRCLAPKPSSRPS 277
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 27/194 (13%)
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGR 189
Y + L LV M L H++H + R FY AE L+ + E
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRER- 306
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---NLAYTPPEYLKN---GRVI 243
+Y DL +L D+ G R+S GL + +G++ + Y PE +KN
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF-- 364
Query: 244 PESVIY-SFGTVLLDLLSGKHIPPSHALD-MIRGENL--NLLMDSHLEGKFSSEEATQVV 299
S + + G +L ++++G+ P I+ E + + + S +A
Sbjct: 365 --SPDWWALGCLLYEMIAGQ--SPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA---R 417
Query: 300 GLASQCLQYEPRER 313
L SQ L +P ER
Sbjct: 418 SLCSQLLCKDPAER 431
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 54/278 (19%), Positives = 102/278 (36%), Gaps = 41/278 (14%)
Query: 86 VYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRR-KRLANLIGYC 135
V K+ VA D + E E + + + K + NL+G C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 136 CAGDERLLVAEYMPNDTLAKHL--------------FHWEKQTIEWPLRLRVAFYIAEAL 181
++ EY L ++L ++ + + + + +A +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 182 DYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPP 234
+Y + H DL A VL E+ +++ FGL ++ + Y + + P
Sbjct: 171 EY--LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 235 EYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLEGKFSSE 293
E L + +S ++SFG ++ ++ + P P ++ E LL + H K
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLKEGHRMDK--PA 282
Query: 294 EATQVV-GLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
T + + C P +RP+ K LV L R+ T +
Sbjct: 283 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 61/294 (20%), Positives = 97/294 (32%), Gaps = 74/294 (25%)
Query: 86 VYKGRLENRQW------IAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V+ N +AVK + + F+ EAE + L+ + + G C G
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 140 ERLLVAEYMPNDTLAKHL-------------FHWEKQTIEWPLRLRVAFYIAEALDYCNT 186
L+V EYM + L + L + L VA +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY--L 174
Query: 187 EGRPLYH-DLNAYRVLFDED-----GDPRLSCFGLMKNSMDGKSYSTNLA------YTPP 234
G H DL L + GD FG+ ++ Y + PP
Sbjct: 175 AGLHFVHRDLATRNCLVGQGLVVKIGD-----FGMSRDIYSTDYYRVGGRTMLPIRWMPP 229
Query: 235 EYLKNGRVIPESVIYSFGTVLLDLLS-GKH----IPPSHALDMIRG-----------ENL 278
E + + ES ++SFG VL ++ + GK + + A+D I +
Sbjct: 230 ESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEV 289
Query: 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332
+M C Q EP++R S K++ L L V
Sbjct: 290 YAIM--------------------RGCWQREPQQRHSIKDVHARLQALAQAPPV 323
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 21/145 (14%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLFDED-GDPRLSCFGLMKNSMDGKSYST---NLAY 231
+ EA+ +C+ G + H D+ +L D + G+ +L FG + Y+ Y
Sbjct: 158 VLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGS-GALLKDTVYTDFDGTRVY 214
Query: 232 TPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290
+PPE+++ R + ++S G +L D++ G IP H ++IRG+ + +
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHDEEIIRGQ---VFFRQRV---- 266
Query: 291 SSEEATQVVGLASQCLQYEPRERPS 315
S E L CL P +RP+
Sbjct: 267 -SSECQH---LIRWCLALRPSDRPT 287
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 39/266 (14%), Positives = 83/266 (31%), Gaps = 45/266 (16%)
Query: 85 VVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR-KRLANLIGY--CCAGDE 140
V+K + A+K+ K + E V + ++++ Y A D+
Sbjct: 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE-VYAHAVLGQHSHVVRYFSAWAEDD 84
Query: 141 RL-LVAEYMPNDTLAKHLFHWEKQTIEWP-LRLRVAFY-IAEALDYCNTEGRPLYH-DLN 196
+ + EY +LA + + + L+ + L Y ++ L H D+
Sbjct: 85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIK 142
Query: 197 AYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-------------------YTPPEYL 237
+ P + ++ + + E L
Sbjct: 143 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL 202
Query: 238 K-NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM---IRGENLNLLMDSHLEGKFSSE 293
+ N +P++ I++ ++ + P D IR L + S +
Sbjct: 203 QENYTHLPKADIFALALTVVCAAGAE--PLPRNGDQWHEIRQGRL-----PRIPQVLS-Q 254
Query: 294 EATQVVGLASQCLQYEPRERPSTKNL 319
E T+++ + +P RPS L
Sbjct: 255 EFTELL---KVMIHPDPERRPSAMAL 277
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 4e-06
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 56/201 (27%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+ +L L+ +++ L L T E V FY+AE ALD+ H
Sbjct: 98 EGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYLAELALALDH--------LHS 144
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESV 247
L YR +L DE+G +L+ FGL K S+D + + + T EY+ PE V
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT-VEYMA-----PEVV 198
Query: 248 IY----------SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSS 292
SFG ++ ++L+G P +G++ M L+ K F S
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGT--LP------FQGKDRKETMTMILKAKLGMPQFLS 250
Query: 293 EEATQVVGLASQCLQYEPRER 313
EA L + P R
Sbjct: 251 PEA---QSLLRMLFKRNPANR 268
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 24/207 (11%)
Query: 77 ESGEKAA-NVVYKGRLENRQWIAVKKFTKVAWPDPT-QFKEEAEGVGKLRRKRLANLIGY 134
+ + A K LE ++ K++ FK E + + ++ + G
Sbjct: 52 KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111
Query: 135 CCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRL---RVAFYIAE---ALDYCNTE 187
+ + ++ EYM ND++ K ++ + + + I + Y + E
Sbjct: 112 I-TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
Query: 188 GRPLYH-DL---NAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGR 241
+ + H D+ N +L D++G +LS FG + +D K + + PPE+ N
Sbjct: 171 -KNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNES 226
Query: 242 VI--PESVIYSFGTVLLDLLSGKHIPP 266
+ I+S G L + P
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNV--VP 251
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 50/257 (19%), Positives = 79/257 (30%), Gaps = 46/257 (17%)
Query: 86 VYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
V++ + + AVKK V EE L R+ L G G +
Sbjct: 74 VHRMKDKQTGFQCAVKK---VRLEVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 145 AEYMPNDTLAKHLFHW----EKQTIEWPLRLRVAFY---IAEALDYCNTEGRPLYHDLNA 197
E + +L + + E + +Y E L+Y +T L+ D+ A
Sbjct: 129 MELLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEGLEYLHTRRI-LHGDVKA 178
Query: 198 YRVLFDEDGDP-RLSCFGLMKNSMDGKSYSTNLAY-----TP----PEYLKNGRVIPESV 247
VL DG L FG + L T PE + +
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 248 IYSFGTVLLDLLSGKH----IPPSHALDMIRGEN-LNLLMDSHLEGKFSSEEATQVVGLA 302
I+S ++L +L+G H I E + + Q +
Sbjct: 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC-----APLTAQAI--- 290
Query: 303 SQCLQYEPRERPSTKNL 319
+ L+ EP R S L
Sbjct: 291 QEGLRKEPVHRASAMEL 307
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 28/254 (11%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA 137
G+ A+ VY + Q +A+++ P E + + + + N +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 138 GDERLLVAEYMP----NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
GDE +V EY+ D + + E Q I V +AL++ ++ ++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMD-EGQ-IA-----AVCRECLQALEFLHSNQV-IHR 140
Query: 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESVIY 249
D+ + +L DG +L+ FG +S + + TP PE + P+ I+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 250 SFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQC 305
S G + ++++ G+ + P AL +I L + K S+ ++C
Sbjct: 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE---KLSAI----FRDFLNRC 253
Query: 306 LQYEPRERPSTKNL 319
L+ + +R S K L
Sbjct: 254 LEMDVEKRGSAKEL 267
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 380 DDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYAR 439
+ E E Q + +M R Q AF D+ AI + + + V + +
Sbjct: 126 SENEEKEA--QSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELREL 182
Query: 440 RSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDA 487
R+ C + A+ D A D AFY S +L + +
Sbjct: 183 RAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELS 230
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 50/286 (17%), Positives = 94/286 (32%), Gaps = 61/286 (21%)
Query: 86 VYKGRLENRQW----IAVK--KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC---- 135
V +G L+ +AVK K + + +F EA + + L+G C
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 136 -CAGDERLLVAEYMPN----DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
+ +++ +M L + I L+ IA ++Y R
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY--LSNRN 167
Query: 191 LYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKNGRVI 243
H DL A + +D ++ FGL K G Y + E L +
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT 227
Query: 244 PESVIYSFGTVLLDLLS-GK----HIPPSHALDMIRG-----------ENLNLLMDSHLE 287
+S +++FG + ++ + G + D + + L +M
Sbjct: 228 SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIM----- 282
Query: 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR-LQTKSDV 332
C + +P +RP+ L + L + L++ DV
Sbjct: 283 ---------------YSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 37/260 (14%)
Query: 85 VVYKGRLENRQWIAVK--KFTKVAWPDPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDE 140
V++ E +Q A+K + ++ E + KL+ ++ L Y
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102
Query: 141 RLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+V E D L W +K++I+ R + EA+ + G + H DL
Sbjct: 103 IYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKP 155
Query: 198 YRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN---LAYTPPEYLKNGRVIPESV---- 247
L DG +L FG+ M+ + + Y PPE +K+ E+
Sbjct: 156 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 214
Query: 248 -------IYSFGTVLLDLLSGKHIPP-SHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299
++S G +L + GK P ++ I L+ ++D + E +F +
Sbjct: 215 KISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKDLQ 270
Query: 300 GLASQCLQYEPRERPSTKNL 319
+ CL+ +P++R S L
Sbjct: 271 DVLKCCLKRDPKQRISIPEL 290
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 7e-06
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 24/147 (16%)
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGR 189
Y L LV M + H+++ ++ + R FY A+ L++ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTAQIVSGLEHLHQRN- 309
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIY 249
+Y DL VL D+DG+ R+S GL G++ + A T P ++ PE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT-PGFMA-----PELLLG 363
Query: 250 ----------SFGTVLLDLLSGKHIPP 266
+ G L ++++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR--GP 388
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 37/260 (14%)
Query: 85 VVYKGRLENRQWIAVK--KFTKVAWPDPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDE 140
V++ E +Q A+K + ++ E + KL+ ++ L Y
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83
Query: 141 RLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+V E D L W +K++I+ R + EA+ + G + H DL
Sbjct: 84 IYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKP 136
Query: 198 YRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN---LAYTPPEYLKNGRVIPESV---- 247
L DG +L FG+ M+ + + Y PPE +K+ E+
Sbjct: 137 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 195
Query: 248 -------IYSFGTVLLDLLSGKHIPP-SHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299
++S G +L + GK P ++ I L+ ++D + E +F +
Sbjct: 196 KISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKDLQ 251
Query: 300 GLASQCLQYEPRERPSTKNL 319
+ CL+ +P++R S L
Sbjct: 252 DVLKCCLKRDPKQRISIPEL 271
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 45/201 (22%), Positives = 73/201 (36%), Gaps = 56/201 (27%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+L L+ EY+ L L + FY+AE AL + H
Sbjct: 93 GGKLYLILEYLSGGELFMQLEREGIFMED-----TACFYLAEISMALGH--------LHQ 139
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESV 247
YR ++ + G +L+ FGL K S+ + + T EY+ PE +
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGT-IEYMA-----PEIL 193
Query: 248 IY----------SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSS 292
+ S G ++ D+L+G PP GEN +D L+ K + +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGA--PP------FTGENRKKTIDKILKCKLNLPPYLT 245
Query: 293 EEATQVVGLASQCLQYEPRER 313
+EA L + L+ R
Sbjct: 246 QEA---RDLLKKLLKRNAASR 263
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 9e-06
Identities = 53/266 (19%), Positives = 101/266 (37%), Gaps = 57/266 (21%)
Query: 85 VVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGY--CCAGDER 141
+VY GR L N+ IA+K+ + EE + + + N++ Y + +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE---IALHKHLKHKNIVQYLGSFSENGF 93
Query: 142 L-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLR---VAFY---IAEALDYCNTEGRPLYH- 193
+ + E +P +L+ L ++ PL+ + FY I E L Y + + H
Sbjct: 94 IKIFMEQVPGGSLSALL-----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHR 146
Query: 194 DLNAYRVLFD-EDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRVIPESV- 247
D+ VL + G ++S FG K + T PE +I +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE------IIDKGPR 200
Query: 248 -------IYSFGTVLLDLLSGKHIPPSHALD-------MIRGENLNLLMDSHLEGKFSSE 293
I+S G ++++ +GK PP + L + ++ + + S
Sbjct: 201 GYGKAADIWSLGCTIIEMATGK--PPFYELGEPQAAMFKVGMFKVHPEIPESM-----SA 253
Query: 294 EATQVVGLASQCLQYEPRERPSTKNL 319
EA + +C + +P +R +L
Sbjct: 254 EAKAFI---LKCFEPDPDKRACANDL 276
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 55/260 (21%), Positives = 102/260 (39%), Gaps = 37/260 (14%)
Query: 85 VVYKGRLENRQWIAVK--KFTKVAWPDPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDE 140
V++ E +Q A+K + ++ E + KL+ ++ L Y
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 141 RLLVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
+V E D L W +K++I+ R + EA+ + G + H DL
Sbjct: 131 IYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKP 183
Query: 198 YRVLFDEDGDPRLSCFGL---MKNSMDGKSYSTN---LAYTPPEYLKN-----------G 240
L DG +L FG+ M+ + + Y PPE +K+
Sbjct: 184 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKS 242
Query: 241 RVIPESVIYSFGTVLLDLLSGKHIPP-SHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299
++ P+S ++S G +L + GK P ++ I L+ ++D + E +F +
Sbjct: 243 KISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKDLQ 298
Query: 300 GLASQCLQYEPRERPSTKNL 319
+ CL+ +P++R S L
Sbjct: 299 DVLKCCLKRDPKQRISIPEL 318
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 55/283 (19%), Positives = 100/283 (35%), Gaps = 51/283 (18%)
Query: 86 VYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRR-KRLANLIGYC 135
V K+ VA D + E E + + + K + NL+G C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 136 CAGDERLLVAEYMPNDTLAKHL--------------FHWEKQTIEWPLRLRVAFYIAEAL 181
++ EY L ++L ++ + + + + +A +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 182 DYCNTEGRPLYH-DLNAYRVLFDED-----GDPRLSCFGLMKNSMDGKSYSTN------L 229
+Y + H DL A VL E+ D FGL ++ + Y +
Sbjct: 217 EY--LASQKCIHRDLAARNVLVTENNVMKIAD-----FGLARDINNIDYYKKTTNGRLPV 269
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSHLEG 288
+ PE L + +S ++SFG ++ ++ + P P ++ E LL + H
Sbjct: 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELFKLLKEGHRMD 325
Query: 289 KFSSEEATQVV-GLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
K T + + C P +RP+ K LV L R+ T +
Sbjct: 326 K--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 404 KQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA 463
+G+ FR+K + AI YY+ + + P Y+ S C++ + + +A
Sbjct: 11 DKGNQFFRNKKYDDAIKYYNWALELK--EDPVFYSNLSACYVSVGDLKKVVEMSTKALEL 68
Query: 464 HPDWPTAFYMQSVALSKLDMQKDA 487
PD+ ++ A L DA
Sbjct: 69 KPDYSKVLLRRASANEGLGKFADA 92
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 42/194 (21%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+RL V EY L HL T E R FY AE AL+Y ++ +Y D
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGAEIVSALEYLHSRD-VVYRD 130
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIY----- 249
+ ++ D+DG +++ FGL K + + T PEYL PE +
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT-PEYLA-----PEVLEDNDYGR 184
Query: 250 -----SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSSEEATQVV 299
G V+ +++ G+ P + ++ L + L + S EA
Sbjct: 185 AVDWWGLGVVMYEMMCGR--LPFY------NQDHERLFELILMEEIRFPRTLSPEA---K 233
Query: 300 GLASQCLQYEPRER 313
L + L+ +P++R
Sbjct: 234 SLLAGLLKKDPKQR 247
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 54/272 (19%)
Query: 86 VYKGRL----ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140
VY G L + AVK ++ + +QF E + + +L+G C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 141 -RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
L+V YM + L + E + +A+ + + + H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKF--LASKKFVHRDLAAR 221
Query: 199 RVLFDEDGDPRLSCFGL---MKNSMDGKSYSTNLA-----YTPPEYLKNGRVIPESVIYS 250
+ DE +++ FGL M + ++ A + E L+ + +S ++S
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 281
Query: 251 FGTVLLDLLS-GK----HIPPSHALDMIRG-----------ENLNLLMDSHLEGKFSSEE 294
FG +L +L++ G + + + L +M
Sbjct: 282 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVM------------ 329
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
+C + RPS LV ++ +
Sbjct: 330 --------LKCWHPKAEMRPSFSELVSRISAI 353
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 46/167 (27%)
Query: 177 IAEALDYCNTEGRPLYHDLN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNL 229
+ E + H LN +R +L D+D + +L+ FG G+ +
Sbjct: 133 LLEVICAL--------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-V 183
Query: 230 AYTP----PEYLKNGRVI------PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN 279
TP PE ++ E ++S G ++ LL+G PP
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQM 235
Query: 280 LLMDSHLEGKFS---------SEEATQVVGLASQCLQYEPRERPSTK 317
L++ + G + S+ +V S+ L +P++R + +
Sbjct: 236 LMLRMIMSGNYQFGSPEWDDYSDTVKDLV---SRFLVVQPQKRYTAE 279
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 3/108 (2%)
Query: 380 DDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYAR 439
++E E + + +M R Q AF D+ AI + + + V + +
Sbjct: 103 SEQEEKEA--ESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELREL 159
Query: 440 RSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDA 487
R+ C + A+ D A D AFY S +L + +
Sbjct: 160 RAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELS 207
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 30/155 (19%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTNL--- 229
+ + Y + + H DL +L +D + R+ FGL + K +
Sbjct: 135 VLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
Y PE L G + ++S G +L LLSG PP + G N ++ +GK
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILKKVEKGK 243
Query: 290 FS---------SEEATQVVGLASQCLQYEPRERPS 315
++ SE A ++ + L Y P R S
Sbjct: 244 YTFELPQWKKVSESAKDLI---RKMLTYVPSMRIS 275
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 43/229 (18%), Positives = 85/229 (37%), Gaps = 32/229 (13%)
Query: 146 EYMPN--DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203
E M D K+++ I + ++ +AL++ + ++ D+ +L D
Sbjct: 101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD 160
Query: 204 EDGDPRLSCFGL---MKNSMDGKSYSTNLAYTP----PEYLKNGRVIPE----SVIYSFG 252
G+ +L FG+ + +S+ T A PE + S ++S G
Sbjct: 161 RSGNIKLCDFGISGQLVDSIAK----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
Query: 253 TVLLDLLSGKH-IPPSH----ALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
L +L +G+ P + L + + L +S E +FS V + CL
Sbjct: 217 ITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE-EREFS-PSFINFV---NLCLT 271
Query: 308 YEPRERPSTKNLV----VTLARLQTKSDVPSNVMLRVSKHEEAQSTPQR 352
+ +RP K L+ + + + +V V + + S+P
Sbjct: 272 KDESKRPKYKELLKHPFILMYE-ERAVEVACYVCKILDQMPATPSSPMY 319
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 52/279 (18%), Positives = 103/279 (36%), Gaps = 42/279 (15%)
Query: 86 VYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRR-KRLANLIGYCCA 137
V + + +AVK A + E + + L + NL+G C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 138 GDERLLVAEYMPNDTLAKHL----------------FHWEKQTIEWPLRLRVAFYIAEAL 181
G L++ EY L L ++ ++ L ++ +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 182 DYCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY--STN----LAYTPP 234
+ + H DL A +L ++ FGL ++ + +Y N + + P
Sbjct: 159 AF--LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 235 EYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSS 292
E + N ES ++S+G L +L S P P +D + ++ + + S
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRML---SP 270
Query: 293 EEATQVV-GLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
E A + + C +P +RP+ K +V + + ++S
Sbjct: 271 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 18/193 (9%)
Query: 85 VVYKGR--LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGYCCAGD 139
VY + N + +A+K +F+ E +L + + ++I D
Sbjct: 26 TVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD 84
Query: 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
LV EY+ TL++++ + + I + + + + + H D+
Sbjct: 85 CYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQ 140
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTNL-----AYTPPEYLKNGRVIPESVIYSFGT 253
+L D + ++ FG+ K + TN Y PE K + IYS G
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGI 200
Query: 254 VLLDLLSGKHIPP 266
VL ++L G+ PP
Sbjct: 201 VLYEMLVGE--PP 211
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 6e-05
Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 10/109 (9%)
Query: 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQ 459
L+ ++ G+ A++ KDF TA+ +Y + ++ + T ++ + + +
Sbjct: 5 LKEKELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 460 A-------QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501
A + + A+ + K + KDA +L E R
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFY--NKSLAEHR 110
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 7e-05
Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 45/200 (22%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+ RL V EY+ L H+ K E FY AE AL+Y + G +Y D
Sbjct: 82 ESRLFFVIEYVNGGDLMFHMQRQRKLPEE-----HARFYSAEISLALNYLHERG-IIYRD 135
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYT---PPEYLKNGRVIPESVIY-- 249
L VL D +G +L+ +G+ K + + T P Y+ PE +
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCKEGLRP----GDTTSTFCGTPNYIA-----PEILRGED 186
Query: 250 --------SFGTVLLDLLSGKHIPP---SHALDMIRGENLNLLMDSHLEGK-----FSSE 293
+ G ++ ++++G+ P + D + L LE + S
Sbjct: 187 YGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV 244
Query: 294 EATQVVGLASQCLQYEPRER 313
+A V+ L +P+ER
Sbjct: 245 KAASVL---KSFLNKDPKER 261
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 29/154 (18%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTNL--- 229
+ AL Y +++ + H DL +LF ++ FGL + + +
Sbjct: 133 MMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA 190
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
Y PE K V + I+S G V+ LL+G P G +L + +
Sbjct: 191 LYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQKATYKE 241
Query: 290 FS--------SEEATQVVGLASQCLQYEPRERPS 315
+ + +A ++ Q L +P RPS
Sbjct: 242 PNYAVECRPLTPQAVDLL---KQMLTKDPERRPS 272
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 8e-05
Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 43/174 (24%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+ L LV EY L L + ++ FY+AE A+D H
Sbjct: 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPA----EMARFYLAEIVMAIDS--------VHR 180
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEY-----LKNGRV 242
L +R +L D G RL+ FG + + +A P+Y L+
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGG 240
Query: 243 IPESVIY-------SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
P + Y + G ++ G+ P +A ++ + K
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQ--TPFYA------DSTAETYGKIVHYK 286
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 9e-05
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTNL--- 229
+ + Y + + H DL +L ++D ++ FGL + K L
Sbjct: 145 VLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTA 202
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
Y PE L+ + + ++S G +L LL+G PP G+ ++ +GK
Sbjct: 203 YYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILRKVEKGK 253
Query: 290 FS---------SEEATQVVGLASQCLQYEPRERPS 315
++ SE A ++ Q LQ++ + R S
Sbjct: 254 YTFDSPEWKNVSEGAKDLI---KQMLQFDSQRRIS 285
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 9e-05
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 39/166 (23%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
FY AE AL+Y + G +Y DL VL D +G +L+ +G+ K + +
Sbjct: 154 HARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----GD 208
Query: 229 LAYT---PPEYLKNGRVIPESVIY----------SFGTVLLDLLSGKHIPP---SHALDM 272
T P Y+ PE + + G ++ ++++G+ P + D
Sbjct: 209 TTSTFCGTPNYIA-----PEILRGEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDN 261
Query: 273 IRGENLNLLMDSHLEGK-----FSSEEATQVVGLASQCLQYEPRER 313
+ L LE + S +A V+ L +P+ER
Sbjct: 262 PDQNTEDYLFQVILEKQIRIPRSLSVKAASVL---KSFLNKDPKER 304
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 38/197 (19%), Positives = 64/197 (32%), Gaps = 43/197 (21%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+E + +V + + L HL E V +I E ALDY +
Sbjct: 87 EEDMFMVVDLLLGGDLRYHLQQNVHFKEE-----TVKLFICELVMALDY--------LQN 133
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYST---NLAYTPPEYLKNGRVIP 244
+R +L DE G ++ F + +T Y PE + +
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAG 193
Query: 245 ESVI---YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSSEEAT 296
S +S G +LL G+ P H + ++ + S+E
Sbjct: 194 YSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSSKEIVHTFETTVVTYPSAWSQEM- 247
Query: 297 QVVGLASQCLQYEPRER 313
V L + L+ P +R
Sbjct: 248 --VSLLKKLLEPNPDQR 262
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 42/199 (21%)
Query: 134 YCCAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGR 189
C +RL V E++ L H+ + R FY AE AL + + +G
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA-----RARFYAAEIISALMFLHDKG- 144
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIY 249
+Y DL VL D +G +L+ FG+ K + + T P+Y+ PE +
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGT-PDYIA-----PEILQE 198
Query: 250 ----------SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSSEE 294
+ G +L ++L G P EN + L ++ L + + E+
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGH--APFE------AENEDDLFEAILNDEVVYPTWLHED 250
Query: 295 ATQVVGLASQCLQYEPRER 313
AT ++ + P R
Sbjct: 251 ATGIL---KSFMTKNPTMR 266
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 35/163 (21%), Positives = 56/163 (34%), Gaps = 40/163 (24%)
Query: 177 IAEALDYCNTEGRPLYHDLN-AYR-------VLFDEDGDP---RLSCFGLMKNSMDGKSY 225
I + ++Y H +R + DE G+P R+ FG K
Sbjct: 125 ITKTVEYL--------HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176
Query: 226 STNLAYTP----PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL 281
YT PE L+ I+S G +L +L+G P + +
Sbjct: 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPEEI 231
Query: 282 MDSHLEGKFS---------SEEATQVVGLASQCLQYEPRERPS 315
+ GKFS S+ A +V S+ L +P +R +
Sbjct: 232 LARIGSGKFSLSGGYWNSVSDTAKDLV---SKMLHVDPHQRLT 271
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 53/284 (18%), Positives = 92/284 (32%), Gaps = 70/284 (24%)
Query: 86 VYKGRLENRQWIAVKKFTKVA---------WPDPTQFKEEAEGVGKLRRKRLANLIGYCC 136
VYKG L ++ VA P +F+ EA +L+ + L+G
Sbjct: 25 VYKGHLFGP--APGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 137 AGDERLLVAEYMPN--------------DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD 182
++ Y + D + K +E P + + IA ++
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 183 YCNTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPE 235
Y + H DL VL + + ++S GL + Y + PE
Sbjct: 143 Y--LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE 200
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHA----LDMIRG-----------ENLN 279
+ G+ +S I+S+G VL ++ S P ++ ++MIR +
Sbjct: 201 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVY 260
Query: 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
LM +C P RP K++ L
Sbjct: 261 ALM--------------------IECWNEFPSRRPRFKDIHSRL 284
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 48/280 (17%)
Query: 86 VYKGRLENRQW------IAVKKFTKVA-WPDPTQFKEEAEGVGKLRR-KRLANLIGYCCA 137
V + +AVK A + E + + L + + + NL+G C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 138 GDERLLVAEYMPN------------DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN 185
G L++ EY F T L + +A+ + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAF-- 179
Query: 186 TEGRPLYH-DLNAYRVLFDED-----GDPRLSCFGLMKNSMDGKSY--STN----LAYTP 233
+ H D+ A VL GD FGL ++ M+ +Y N + +
Sbjct: 180 LASKNCIHRDVAARNVLLTNGHVAKIGD-----FGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFS 291
PE + + +S ++S+G +L ++ S P P ++ + L+ D + +
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI---LVNSKFYKLVKDGYQMA---Q 288
Query: 292 SEEATQVV-GLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
A + + + C EP RP+ + + L +
Sbjct: 289 PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 56/201 (27%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
E L V EY+ L H+ + R FY AE L + H
Sbjct: 90 KENLFFVMEYLNGGDLMYHI-QSCHKFDL----SRATFYAAEIILGLQF--------LHS 136
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESV 247
YR +L D+DG +++ FG+ K +M G + + T P+Y+ PE +
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGT-PDYI-----APEIL 190
Query: 248 IY----------SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSS 292
+ SFG +L ++L G+ P H G++ L S +
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQ--SPFH------GQDEEELFHSIRMDNPFYPRWLE 242
Query: 293 EEATQVVGLASQCLQYEPRER 313
+EA ++ + EP +R
Sbjct: 243 KEAKDLL---VKLFVREPEKR 260
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 44/167 (26%), Positives = 59/167 (35%), Gaps = 50/167 (29%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLN-AYR------VLFDEDGDPRLSCFGLMKNSMD 221
R FY AE AL Y H LN YR +L D G L+ FGL K +++
Sbjct: 140 RARFYAAEIASALGY--------LHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191
Query: 222 GKSYSTNLAYTPPEYLKNGRVIPESVIY----------SFGTVLLDLLSGKHIPPSHALD 271
S ++ T PEYL PE + G VL ++L G PP
Sbjct: 192 HNSTTSTFCGT-PEYLA-----PEVLHKQPYDRTVDWWCLGAVLYEMLYGL--PP----- 238
Query: 272 MIRGENLNLLMDSHLEGK-----FSSEEATQVVGLASQCLQYEPRER 313
N + D+ L + A L LQ + +R
Sbjct: 239 -FYSRNTAEMYDNILNKPLQLKPNITNSA---RHLLEGLLQKDRTKR 281
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 27/223 (12%)
Query: 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205
E M T A+ L + I + ++ I +AL Y + ++ D+ +L DE
Sbjct: 104 ELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER 161
Query: 206 GDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKNGRVIPE-----SVIYSFGTVLLD 257
G +L FG+ + + + AY PE + + ++S G L++
Sbjct: 162 GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 258 LLSGKH-IPPSH----ALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
L +G+ L + E LL FS + + V CL + R+
Sbjct: 222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPG---HMGFSGDFQSFV----KDCLTKDHRK 274
Query: 313 RPSTKNLV----VTLARLQTKSDVPSNVMLRVSKHEEAQSTPQ 351
RP L+ + + DV S ++K E +S P
Sbjct: 275 RPKYNKLLEHSFIKRYE-TLEVDVASWFKDVMAKTESPRSGPS 316
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 42/194 (21%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
+RL V EY+ L H+ + FY AE L + ++G +Y D
Sbjct: 93 MDRLYFVMEYVNGGDLMYHIQQVGRFKEP-----HAVFYAAEIAIGLFFLQSKG-IIYRD 146
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVIPESVIY----- 249
L V+ D +G +++ FG+ K ++ + T P+Y+ PE + Y
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGT-PDYIA-----PEIIAYQPYGK 200
Query: 250 -----SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-----FSSEEATQVV 299
+FG +L ++L+G+ P GE+ + L S +E S+EA +
Sbjct: 201 SVDWWAFGVLLYEMLAGQ--APFE------GEDEDELFQSIMEHNVAYPKSMSKEAVAIC 252
Query: 300 GLASQCLQYEPRER 313
+ P +R
Sbjct: 253 ---KGLMTKHPGKR 263
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 29/191 (15%)
Query: 146 EYMP--NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203
E M D K + + E L ++A I +AL++ +++ ++ D+ VL +
Sbjct: 86 ELMDTSLDKFYKQVIDKGQTIPEDILG-KIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN 144
Query: 204 EDGDPRLSCFGL---MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESV---------IYSF 251
G ++ FG+ + + + + Y PE R+ PE I+S
Sbjct: 145 ALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE-----RINPELNQKGYSVKSDIWSL 199
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS---HLEGKFSSEEATQVVGLASQCLQY 308
G +++L + P + + L +++ L S E SQCL+
Sbjct: 200 GITMIELAILR--FPYDSWGTPF-QQLKQVVEEPSPQLPADKFSAEFVDFT---SQCLKK 253
Query: 309 EPRERPSTKNL 319
+ERP+ L
Sbjct: 254 NSKERPTYPEL 264
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 46/167 (27%)
Query: 177 IAEALDYCNTEGRPLYHDLN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNL 229
+ EA+ + H N +R +L D++ RLS FG + G+ L
Sbjct: 209 LLEAVSFL--------HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE-L 259
Query: 230 AYTP----PEYLKNGRVI------PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN 279
TP PE LK E +++ G +L LL+G PP
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRRQI 311
Query: 280 LLMDSHLEGKFS---------SEEATQVVGLASQCLQYEPRERPSTK 317
L++ +EG++ S ++ S+ LQ +P R + +
Sbjct: 312 LMLRMIMEGQYQFSSPEWDDRSSTVKDLI---SRLLQVDPEARLTAE 355
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 43/261 (16%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK----LRRKRLANLIG 133
G+ + V+KG ++ +A+K D + ++E E + + L + +
Sbjct: 31 GKGSFGEVFKGIDNRTQKVVAIKII------DLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 134 YCCA---GDERLLVAEYMP----NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT 186
Y + + ++ EY+ D L E Q I LR I + LDY ++
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-ETQ-IATILR-----EILKGLDYLHS 137
Query: 187 EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYLKNGRV 242
E + ++ D+ A VL E G+ +L+ FG+ D + TP PE +K
Sbjct: 138 EKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 196
Query: 243 IPESVIYSFGTVLLDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
++ I+S G ++L G+ + P L +I N LEG +S V
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYSKPLKEFV 251
Query: 299 VGLASQCLQYEPRERPSTKNL 319
CL EP RP+ K L
Sbjct: 252 ----EACLNKEPSFRPTAKEL 268
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 18/132 (13%)
Query: 382 KETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP------- 434
K ++ + +E +++ + +++G+ F+ + AI Y + ++ I
Sbjct: 24 KSIYDYTDEE---KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILL 80
Query: 435 --------TVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKD 486
+ + C+ + A+ A + + A Y VA ++
Sbjct: 81 DKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEE 140
Query: 487 AADMLLEGAALE 498
A + L + A+L
Sbjct: 141 AKENLYKAASLN 152
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 45/274 (16%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK----LRRKRLANLIG 133
G A VV ++ +A+K+ + + + + + K + + N++
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRI------NLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 134 YCCA---GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIA-------EALDY 183
Y + DE LV + + ++ + H + L + IA E L+Y
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES-TIATILREVLEGLEY 136
Query: 184 CNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL---MKNSMDGKSYS--TNLAYTP----P 234
+ G+ ++ D+ A +L EDG +++ FG+ + D TP P
Sbjct: 137 LHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 235 EYLKNGRVIPESV-IYSFGTVLLDLLSGK----HIPPSHALDMIRGEN----LNLLMDSH 285
E ++ R I+SFG ++L +G PP L + + + D
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKE 255
Query: 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ K+ + S CLQ +P +RP+ L
Sbjct: 256 MLKKYGKSFRKMI----SLCLQKDPEKRPTAAEL 285
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 30/155 (19%)
Query: 177 IAEALDYCNTEGRPLYH-DLNAYRVLF---DEDGDPRLSCFGLMKNSMDGKSYSTNL--- 229
+ + Y + + H DL +L ++D D ++ FGL +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
Y PE L+ G + ++S G +L LLSG PP + G+N ++ GK
Sbjct: 188 YYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILKRVETGK 238
Query: 290 FS---------SEEATQVVGLASQCLQYEPRERPS 315
++ S++A ++ + L + P R +
Sbjct: 239 YAFDLPQWRTISDDAKDLI---RKMLTFHPSLRIT 270
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
D L LV +Y L L +E + E FY+AE A+D H
Sbjct: 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPE----EMARFYLAEMVIAIDS--------VHQ 193
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYL 237
L+ +R +L D +G RL+ FG M+ + +++A P+Y+
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 38/161 (23%)
Query: 172 RVAFYIAE---ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN 228
FY AE L + ++G +Y DL V+ D +G +++ FG+ K ++ +
Sbjct: 443 HAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT 501
Query: 229 LAYTPPEYLKNGRVIPESVIY----------SFGTVLLDLLSGKHIPPSHALDMIRGENL 278
T P+Y+ PE + Y +FG +L ++L+G+ P GE+
Sbjct: 502 FCGT-PDYIA-----PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFE------GEDE 547
Query: 279 NLLMDSHLEGK-----FSSEEATQVV-GLASQCLQYEPRER 313
+ L S +E S+EA + GL + P +R
Sbjct: 548 DELFQSIMEHNVAYPKSMSKEAVAICKGL----MTKHPGKR 584
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 64/270 (23%), Positives = 99/270 (36%), Gaps = 41/270 (15%)
Query: 86 VYKGRLENRQW---IAVKKFTKVA-WPDPTQFKEEAEGVGKLRR-KRLANLIGYCCAGDE 140
V K R++ A+K+ + A D F E E + KL + NL+G C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 141 RLLVAEYMPNDTLAKHL--------------FHWEKQTIEWPLRLRVAFYIAEALDYCNT 186
L EY P+ L L + T+ L A +A +DY
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY--L 158
Query: 187 EGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA------YTPPEYLKN 239
+ H DL A +L E+ +++ FGL S + Y + E L
Sbjct: 159 SQKQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIP-PSHALDMIRGENLNLLMDSH-LEGKFSSEEATQ 297
S ++S+G +L +++S P M E L + LE
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYC----GMTCAELYEKLPQGYRLE---KPLNCDD 268
Query: 298 VV-GLASQCLQYEPRERPSTKNLVVTLARL 326
V L QC + +P ERPS ++V+L R+
Sbjct: 269 EVYDLMRQCWREKPYERPSFAQILVSLNRM 298
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 19/136 (13%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 377 HYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQ---FINVNIMVS 433
+ KE+ E++ +E ++ +++G F++ +K A+ Y + ++ S
Sbjct: 128 SFEKAKESWEMNSEE---KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS 184
Query: 434 P-----------TVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLD 482
+ ++CHL AA+ +A + + A ++
Sbjct: 185 NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN 244
Query: 483 MQKDAADMLLEGAALE 498
+ A + L
Sbjct: 245 DFELARADFQKVLQLY 260
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 42/161 (26%)
Query: 177 IAEALDYCNTEGRPLYHDLN-AYR------VLF---DEDGDPRLSCFGLMKNSMDGKSYS 226
I + Y H N +R +L + + ++ FGL
Sbjct: 155 ILSGICYL--------HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 227 T---NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283
Y PE LK + + ++S G ++ LL G PP G+N ++
Sbjct: 207 DRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PP------FGGQNDQDIIK 257
Query: 284 SHLEGKFS---------SEEATQVVGLASQCLQYEPRERPS 315
+GK+ S+EA +++ L Y+ +R +
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELI---KLMLTYDYNKRCT 295
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 54/201 (26%)
Query: 139 DERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE---ALDYCNTEGRPLYHD 194
DE+L Y N L K++ FY AE AL+Y H
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTRFYTAEIVSALEY--------LHG 148
Query: 195 LN-AYR------VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYT---PPEYLKNGRVIP 244
+R +L +ED +++ FG K + A + +Y+ P
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVS-----P 201
Query: 245 E---------SV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSS 292
E S +++ G ++ L++G PP R N L+ ++ + F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPE 253
Query: 293 EEATQVVGLASQCLQYEPRER 313
+ + L + L + +R
Sbjct: 254 KFFPKARDLVEKLLVLDATKR 274
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 7e-04
Identities = 52/322 (16%), Positives = 107/322 (33%), Gaps = 53/322 (16%)
Query: 22 ERPLTQRKEASTESDTATPTATVQPTNEEAPLFSEFSFLDLRAATNNFSSD-NIVSESGE 80
+R + + T + N ++ ++ + ++ +I E G
Sbjct: 108 KRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGT 167
Query: 81 KAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
A VV++ A K D ++E + + LR L NL +
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN 227
Query: 140 ERLLVAEYMPN----DTLAKHLFHW-EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
E +++ E+M + +A E + +E+ +R + + L + H+
Sbjct: 228 EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY---MRQ---VCKGLCHM--------HE 273
Query: 195 LN-AYR------VLFDEDGDPRLSC--FGLMKNSMDGKSYSTNLA---YTPPEYLKNGRV 242
N + ++F L FGL + +S + PE + V
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 243 IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS---------SE 293
+ ++S G + LLSG + P GEN + + + ++ SE
Sbjct: 334 GYYTDMWSVGVLSYILLSG--LSP------FGGENDDETLRNVKSCDWNMDDSAFSGISE 385
Query: 294 EATQVVGLASQCLQYEPRERPS 315
+ + + L +P R +
Sbjct: 386 DGKDFI---RKLLLADPNTRMT 404
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 508 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.97 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.85 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.76 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.76 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.75 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.74 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.73 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.7 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.69 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.68 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.68 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.68 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.64 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.61 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.61 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.61 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.59 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.59 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.59 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.58 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.58 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.58 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.57 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.57 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.55 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.55 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.55 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.55 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.54 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.54 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.53 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.53 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.52 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.52 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.51 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.51 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.5 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.49 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.47 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.47 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.47 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.45 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.45 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.44 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.44 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.43 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.42 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.41 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.4 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.39 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.37 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.37 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.35 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.35 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.33 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.33 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.32 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.32 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.31 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.31 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.31 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.31 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.3 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.29 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.29 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.29 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.29 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.28 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.27 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.27 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.26 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.26 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.26 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.26 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.26 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.25 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.25 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.25 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.24 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.24 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.24 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.24 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.24 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.24 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.23 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.23 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.23 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.23 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.23 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.23 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.22 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.21 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.21 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.21 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.21 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.19 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.19 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.19 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.19 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.18 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.18 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.17 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.16 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.16 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.16 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.15 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.15 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.15 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.14 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.14 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.13 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.13 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.13 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.11 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.1 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.09 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.08 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.07 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.07 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.06 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.06 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.06 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.05 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.05 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.05 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.04 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.03 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.02 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.02 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.02 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.02 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.01 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.01 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.01 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.01 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.0 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.0 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.0 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.0 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.99 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.99 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 98.99 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 98.97 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 98.97 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 98.97 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.96 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 98.96 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.96 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 98.96 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.96 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.96 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.94 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 98.94 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 98.93 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.93 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.93 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.92 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.91 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.91 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.9 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.9 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.9 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.89 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.89 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.88 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.88 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.88 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.87 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.87 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.86 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.86 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.82 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.82 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.81 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.8 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.79 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.78 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.77 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.76 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.75 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.74 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.74 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.74 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.73 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.73 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.73 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.71 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.71 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.7 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.69 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.68 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.65 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.64 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.63 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.62 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.53 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.52 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.5 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.5 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.48 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.48 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.46 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.43 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.42 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.42 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.35 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.33 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.33 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.29 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.26 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.23 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.22 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.21 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.18 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.16 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.11 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.09 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.07 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.05 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.99 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.96 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.94 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.92 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.9 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.87 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.86 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.79 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.78 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.77 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.72 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.65 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.61 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.59 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.58 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.53 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.52 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.51 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.46 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.41 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.41 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.38 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.29 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.13 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.13 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-59 Score=450.30 Aligned_cols=247 Identities=18% Similarity=0.248 Sum_probs=211.2
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
..|+++++||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 3588999999999999999995 569999999998766666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
+||+|.+++.+ ..+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 99999999953 56999999999999999999999999 999999999999999999999999999865433 45
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~ 303 (508)
.+||+.|||||++.+..|+.++|||||||++|||+||+.||....... .+..+.... .....+...++++.+|+.
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----~~~~i~~~~~~~~~~~~~~s~~~~dli~ 305 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKGFLD 305 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHHHHcCCCCCCCccccCCHHHHHHHH
Confidence 689999999999999999999999999999999999998875432110 011111111 111223456788999999
Q ss_pred HhcccCCCCCCChHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~ 324 (508)
+||..||.+|||+.|+++|-+
T Consensus 306 ~~L~~dP~~R~ta~e~l~Hp~ 326 (346)
T 4fih_A 306 RLLVRDPAQRATAAELLKHPF 326 (346)
T ss_dssp HHSCSSTTTSCCHHHHTTCGG
T ss_pred HHcCCChhHCcCHHHHhcCHh
Confidence 999999999999999998744
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-58 Score=438.59 Aligned_cols=257 Identities=19% Similarity=0.254 Sum_probs=205.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.++++.+.++||+|+||+||+|++.+ .||||+++...... .+.|.+|+.+|++++|||||+++|+|.+ +.++|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 46677889999999999999999754 49999987544322 4579999999999999999999999854 5789999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|||+||+|.++|.. ....+++.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999964 3457999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
....||+.|||||++.+ +.|+.++|||||||+||||+||+.||............+..-.........+..+++
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 268 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCH
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchH
Confidence 34579999999999864 468999999999999999999998875421110000000000001111223455678
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+.+|+.+||+.||++|||+.+|+++|+.++..
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 899999999999999999999999999988753
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-59 Score=451.85 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=208.3
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
+++.+.++||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45567789999999999999864 478899999976554446789999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccC-------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEE
Q 010529 144 VAEYMPNDTLAKHLFHWE-------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRL 210 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl 210 (508)
|||||+||+|.+++.... ...++|.+++.|+.||++||.|||+++ ||||||||+||||+.++.+||
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki 199 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKI 199 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEE
Confidence 999999999999996432 246999999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhc
Q 010529 211 SCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMD 283 (508)
Q Consensus 211 ~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 283 (508)
+|||+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||...... .+...+.
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i~ 274 (329)
T 4aoj_A 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----EAIDCIT 274 (329)
T ss_dssp CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----HHHHHHH
T ss_pred cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----HHHHHHH
Confidence 999999865432 23468899999999999999999999999999999999 78776542111 1111112
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 284 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.......|..+++++.+|+.+||+.||++|||+.+|+++|+.+...
T Consensus 275 ~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 2223345566778899999999999999999999999999998754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-59 Score=445.28 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=211.9
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
+++.+.++||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45678899999999999999864 477899999986554446789999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhcc-----------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcc
Q 010529 144 VAEYMPNDTLAKHLFHW-----------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 212 (508)
|||||+||+|.++|... ....+++.+++.|+.||++||.|||+++ ||||||||+||||+.++.+||+|
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECC
Confidence 99999999999999642 2357999999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccc
Q 010529 213 FGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSH 285 (508)
Q Consensus 213 fg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 285 (508)
||+|+..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||...... .+...+...
T Consensus 172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i~~~ 246 (299)
T 4asz_A 172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECITQG 246 (299)
T ss_dssp CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHHT
T ss_pred cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcC
Confidence 9999755432 23458899999999999999999999999999999999 78776542111 111112222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.....|..+++++.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 247 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 247 RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 22344566778899999999999999999999999999988654
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-58 Score=444.88 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=211.1
Q ss_pred CCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
+++++++++||+|+||+||+|++. +++.||||+++..... ..++|.+|+.++++++|||||+++|+|.+++..
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 455678899999999999999963 4678999999765432 356899999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
+||||||++|+|.++|.... ...+++.+++.|+.||++||.|||+++ ||||||||+||||++++.
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCC
Confidence 99999999999999996421 246899999999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
+||+|||+++..... ....||+.|||||++.++.|+.++|||||||+||||+| |..||.+... ..+..
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-----~~~~~ 258 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVVE 258 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-----HHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 999999999854322 34568899999999999999999999999999999999 7777654221 11122
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+......+.+..++..+.+|+.+||+.||.+||||.+|+++|+.+
T Consensus 259 ~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2222233345667788899999999999999999999999999865
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-58 Score=445.56 Aligned_cols=250 Identities=16% Similarity=0.188 Sum_probs=207.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.++|+++++||+|+||.||+|+. .+|+.||||++....... .+.|.+|+.+|++|+|||||++++++.+++.+||||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46799999999999999999995 569999999997654322 457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|||+||+|.++|.......+++.+++.|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 9999999999997656667899999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||........ +..+.... ....+...++++.+|
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~-~~~~~~~~s~~~~~l 256 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL----VLKIISGS-FPPVSLHYSYDLRSL 256 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTC-CCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCC-CCCCCccCCHHHHHH
Confidence 345799999999999999999999999999999999999988765321111 11111111 122344567889999
Q ss_pred HHHhcccCCCCCCChHHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
|.+||..||.+|||+.++++|-+
T Consensus 257 i~~~L~~dP~~R~s~~e~l~hp~ 279 (350)
T 4b9d_A 257 VSQLFKRNPRDRPSVNSILEKGF 279 (350)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSHH
T ss_pred HHHHccCChhHCcCHHHHhcCHH
Confidence 99999999999999999998743
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-56 Score=477.28 Aligned_cols=415 Identities=13% Similarity=0.099 Sum_probs=298.0
Q ss_pred CcccccccCCCCcccEEEEEEEc--CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCc-----c
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE--NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE-----R 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~-----~ 141 (508)
..|++++.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57899999999999999999964 588999999865432 123468899999999999999999999987665 6
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
||||||++|++|.+++. ..+++.+++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998774 27999999999999999999999999 9999999999999875 899999999998777
Q ss_pred CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 222 GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
.....||+.|+|||++.++ ++.++|||||||++|+|++|..|+..... ..+ .........+..+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~----~~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV--------DGL----PEDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSC----CTTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc--------ccc----cccccccccCHHHHHH
Confidence 7777899999999998765 48899999999999999999765432110 000 0111122345779999
Q ss_pred HHHhcccCCCCCCCh-HHHHHHHHHhhcC-------CCCCccchhccccccc----------------------------
Q 010529 302 ASQCLQYEPRERPST-KNLVVTLARLQTK-------SDVPSNVMLRVSKHEE---------------------------- 345 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~-~~il~~L~~~~~~-------~~~~~~~~~~~~~~~~---------------------------- 345 (508)
+.+||..||.+||+. .++...|..+... ...|............
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEI 380 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHHHSCCCCCCCSSBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccccCCCCCcccccCCcccccccchhhhhhcccccccccccccCCHHHH
Confidence 999999999999965 4455555544211 1111100000000000
Q ss_pred --cCCC----CCCCCCcchhhccccchHHHHHHHHHhh--------cCCCcccccc-----------hhhhhhHHHH---
Q 010529 346 --AQST----PQRPLSPLAEACSRMDLTAIHQILVMAH--------YRDDKETHEL-----------SFQEWTQQMR--- 397 (508)
Q Consensus 346 --~~~~----~~~~~~p~~~~~s~~d~~~l~~~~~~~~--------~~~~~~~~~l-----------~~~~~~~~~~--- 397 (508)
..+. |..+......+....+.++..+.+.... ..+.+..... .+++..+.+.
T Consensus 381 ~~~L~~p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al 460 (681)
T 2pzi_A 381 VTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLA 460 (681)
T ss_dssp HHHSCCBCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhhCCCccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 0000 0000000111234445555555555543 2121111100 0111111111
Q ss_pred -----HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHH
Q 010529 398 -----DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFY 472 (508)
Q Consensus 398 -----~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 472 (508)
+...+...|.+++..|+|++|+..|++|++++|. ++.+|+++|.+|..+|++++ ++.|++|++++|++..+|+
T Consensus 461 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~ 538 (681)
T 2pzi_A 461 ERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAF 538 (681)
T ss_dssp HHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHH
T ss_pred ccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHH
Confidence 1456777888888888888888888888888888 88888888888888888888 8888888888888888889
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 473 MQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 473 ~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++|.+|..+|++++|+++|++|++++|.+..++
T Consensus 539 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 539 GLARARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 999999999999999999999998888876543
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-57 Score=445.75 Aligned_cols=247 Identities=18% Similarity=0.240 Sum_probs=211.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
..|+++++||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4588999999999999999995 569999999998776666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
+||+|.+++. ...+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+
T Consensus 231 ~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 9999999995 346999999999999999999999999 999999999999999999999999999865433 45
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~ 303 (508)
.+||+.|||||++.+..|+.++|||||||++|||++|+.||........ +..+.... .....+...++++.+||.
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~~~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCCCCCcccccCCHHHHHHHH
Confidence 6899999999999999999999999999999999999988754321100 11111110 011223345778999999
Q ss_pred HhcccCCCCCCChHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~ 324 (508)
+||..||.+|||+.|+++|-+
T Consensus 383 ~~L~~dP~~R~ta~ell~Hp~ 403 (423)
T 4fie_A 383 RLLVRDPAQRATAAELLKHPF 403 (423)
T ss_dssp HHSCSSTTTSCCHHHHTTCGG
T ss_pred HHcCCChhHCcCHHHHhcCHH
Confidence 999999999999999998744
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-57 Score=432.77 Aligned_cols=244 Identities=17% Similarity=0.183 Sum_probs=208.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|++++.||+|+||+||+|+. .+++.||||++.+. .....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4689999999999999999995 56999999999643 2234568999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|||+||+|.+++.. .+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999973 467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
.+.+||+.|||||++.+..|+.++|||||||++|||+||+.||........ ...+... ...++...++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI----FAKIIKL--EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHT--CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcC--CCCCCcccCHHHH
Confidence 356799999999999999999999999999999999999988764321111 1111111 1134455678899
Q ss_pred HHHHHhcccCCCCCCChHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+|+.+||..||.+|||+.|++.+
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcChHHHcCC
Confidence 99999999999999999997654
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=432.64 Aligned_cols=250 Identities=18% Similarity=0.117 Sum_probs=209.1
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
....|.+.++||+|+||.||+|+. .+|+.||||+++.... +.+|+.+|+.++|||||++++++.+++.+|||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 345678888999999999999995 5689999999975432 3479999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~~--- 222 (508)
||+||+|.+++.. .+.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+| ++||+|||+|+.....
T Consensus 131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999974 457999999999999999999999999 99999999999999887 6999999999865432
Q ss_pred ------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCCCCHHHH
Q 010529 223 ------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEA 295 (508)
Q Consensus 223 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 295 (508)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||..... ......+.... .....+..++
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~~s 283 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR----GPLCLKIASEPPPIREIPPSCA 283 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC----SCCHHHHHHSCCGGGGSCTTSC
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----HHHHHHHHcCCCCchhcCccCC
Confidence 234699999999999999999999999999999999999988754321 11111111111 1112445667
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+.+.+|+.+||..||.+|||+.|++++|......
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999887543
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-56 Score=422.57 Aligned_cols=245 Identities=18% Similarity=0.221 Sum_probs=196.9
Q ss_pred cccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee----CCcceeee
Q 010529 73 NIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERLLVA 145 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~lv~ 145 (508)
++..+||+|+||+||+|+. .++..||||++...... ..+.|.+|+++|++++|||||+++++|.+ ...+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5556799999999999995 45889999999654322 24579999999999999999999999865 34579999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeCC-CCCeEEcccCCccccCCC-
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDE-DGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~~~~~- 222 (508)
|||+||+|.+++.. ...+++..+..|+.||+.||.|||+++ +||||||||+||||+. +|.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 99999999999973 467999999999999999999999986 5999999999999984 799999999999865443
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
.+.+||+.|||||++.+ .|+.++|||||||++|||+||+.||........ ....+........++...++++.+|
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH---HHHHHHcCCCCCCCCccCCHHHHHH
Confidence 34579999999999864 699999999999999999999988753211000 0011111111111222345679999
Q ss_pred HHHhcccCCCCCCChHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+||..||.+|||+.++++|-
T Consensus 263 i~~~L~~dP~~R~s~~e~l~Hp 284 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHccCChhHCcCHHHHhcCc
Confidence 9999999999999999999863
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-56 Score=416.62 Aligned_cols=247 Identities=20% Similarity=0.249 Sum_probs=196.0
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC---CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.++|++++.||+|+||+||+|+. .+|+.||||++.+... .....+.+|+.+|+.++|||||++++++.+++..|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 46789999999999999999994 5699999999975432 2345799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||| +|+|.+++.. .+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 6899999863 567999999999999999999999999 999999999999999999999999999865443
Q ss_pred -CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
.+.+||+.|||||++.+..+ +.++|||||||++|+|+||+.||........ ...+... ...++...++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL----FKNISNG--VYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHT--CCCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHH
Confidence 45689999999999988776 5799999999999999999988764322111 1111111 11234456788999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
|+.+||+.||++|||+.|+++|-+-
T Consensus 242 li~~~L~~dP~~R~s~~eil~hpw~ 266 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQDDWF 266 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred HHHHHccCChhHCcCHHHHHcCccc
Confidence 9999999999999999999998543
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-56 Score=433.45 Aligned_cols=257 Identities=18% Similarity=0.243 Sum_probs=212.8
Q ss_pred cCCCcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCCC-hhHHHHHHHHhccCCC-CCCcceeeeeeeC
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRR-KRLANLIGYCCAG 138 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~ 138 (508)
-..++|++.+.||+|+||.||+|.+.+ ++.||||++....... .+.|.+|+++|.+++| ||||+++|+|.+.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 455788999999999999999999543 3579999997654322 4579999999999965 8999999999765
Q ss_pred -CcceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC
Q 010529 139 -DERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203 (508)
Q Consensus 139 -~~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~ 203 (508)
+.++||||||++|+|.++|+... ...+++..++.|+.||++||.|||+++ ||||||||+|||++
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~ 219 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLS 219 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeC
Confidence 56899999999999999996432 345899999999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhcc
Q 010529 204 EDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGE 276 (508)
Q Consensus 204 ~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~ 276 (508)
.++.+||+|||+|+...... ...||+.|||||++.+..|+.++|||||||+||||+| |+.||.+... ..
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~----~~ 295 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DE 295 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH----HH
Confidence 99999999999998664432 3457899999999999999999999999999999998 7877654211 11
Q ss_pred chhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 277 NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+...+........|..+++++.+|+.+||+.||.+|||+.+|+++|+.+..
T Consensus 296 ~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 296 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1222333333444566677889999999999999999999999999998754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-56 Score=423.35 Aligned_cols=244 Identities=19% Similarity=0.249 Sum_probs=199.1
Q ss_pred CcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
++|++++.||+|+||+||+|+.. +++.||||+++.... ....++.+|+++|++++|||||++++++.+++.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46899999999999999999852 478899999975432 123468899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC--
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-- 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~-- 221 (508)
|||||+||+|.+++.. .+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999973 457999999999999999999999999 99999999999999999999999999986433
Q ss_pred --CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 222 --GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 222 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
..+.+||+.|||||++.+..|+.++|||||||++|||+||+.||........ ...+... ...++...++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET----MTMILKA--KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH----HHHHHcC--CCCCCCcCCHHHH
Confidence 2456799999999999999999999999999999999999988764321111 1111111 1234555678899
Q ss_pred HHHHHhcccCCCCCCCh-----HHHHHH
Q 010529 300 GLASQCLQYEPRERPST-----KNLVVT 322 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~-----~~il~~ 322 (508)
+|+.+||+.||.+|||+ .|+++|
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 99999999999999985 677766
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-54 Score=417.00 Aligned_cols=252 Identities=18% Similarity=0.256 Sum_probs=196.2
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHH--HHHHHHhccCCCCCCcceeeeeeeCC----cceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQF--KEEAEGVGKLRRKRLANLIGYCCAGD----ERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~nIv~~~~~~~~~~----~~~lv 144 (508)
++.+.++||+|+||+||+|++ +|+.||||++.... ...+ ..|+..+.+++|||||+++|+|.+++ .+|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 356678899999999999998 57889999996432 2334 44566667889999999999998654 57999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC--------CCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE--------GRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~--------~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
||||+||+|.++++ ...+++..+.+|+.|++.||.|||++ + ||||||||+||||+.++.+||+|||++
T Consensus 80 ~Ey~~~gsL~~~l~---~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 80 SDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred ecCCCCCcHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999995 35699999999999999999999987 6 999999999999999999999999999
Q ss_pred cccCCC--------CccccCCCCCCccccccC------CcCccccchhhHHHHHHHHhCCCCCCchhh------hhhh-c
Q 010529 217 KNSMDG--------KSYSTNLAYTPPEYLKNG------RVIPESVIYSFGTVLLDLLSGKHIPPSHAL------DMIR-G 275 (508)
Q Consensus 217 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg~~~~~~~~~------~~~~-~ 275 (508)
+..... ....||+.|||||++.+. .++.++|||||||+||||+||..|+..... .... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 755432 234689999999999754 477899999999999999999865432110 0000 0
Q ss_pred cc----hhhhhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 276 EN----LNLLMDSHLEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 276 ~~----~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.. ...+.....++.++ ...+..+.+|+.+||+.||.+|||+.+|++.|+.+....
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 00 11122222333333 345678999999999999999999999999999987643
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-53 Score=409.17 Aligned_cols=242 Identities=17% Similarity=0.227 Sum_probs=188.8
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCC--------
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-------- 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-------- 139 (508)
++|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 3578999999999999999995 56899999999754422 2457999999999999999999999987544
Q ss_pred ----cceeeeecCCCCCHHHHhhccCC-CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 140 ----ERLLVAEYMPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 140 ----~~~lv~E~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
.+|||||||+||+|.+++..... ...++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCc
Confidence 36899999999999999964322 23456678899999999999999999 9999999999999999999999999
Q ss_pred CccccCCC----------------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch
Q 010529 215 LMKNSMDG----------------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL 278 (508)
Q Consensus 215 ~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 278 (508)
+|+..... ...+||+.|||||++.+..|+.++|||||||++|||++ ||.......
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~------ 234 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV------ 234 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH------
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH------
Confidence 99865432 23469999999999999999999999999999999997 554322110
Q ss_pred hhhhccccCCCCC---HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 279 NLLMDSHLEGKFS---SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 279 ~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+.......++ ...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 235 -~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 235 -RTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011111112223 2345667889999999999999999999986
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-52 Score=414.60 Aligned_cols=250 Identities=16% Similarity=0.224 Sum_probs=199.5
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee------CCc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA------GDE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------~~~ 140 (508)
++|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4699999999999999999995 56999999999754322 23568899999999999999999998754 356
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
+|||||||. |+|.+++. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+...
T Consensus 134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 67999986 4568999999999999999999999999 9999999999999999999999999998653
Q ss_pred C--------CCccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------cc--------
Q 010529 221 D--------GKSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GE-------- 276 (508)
Q Consensus 221 ~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~-------- 276 (508)
. ..+.+||+.|||||++.+. .++.++||||+||++|||+||+.||.+....... +.
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2 2356899999999998875 4689999999999999999999888654211000 00
Q ss_pred ----chhhhhcccc-CCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 277 ----NLNLLMDSHL-EGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 277 ----~~~~~~~~~~-~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.....+.... ....+ ...++++.+|+.+||..||.+|||+.|+++|-
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 0000000000 00011 12356789999999999999999999999884
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=394.36 Aligned_cols=245 Identities=17% Similarity=0.234 Sum_probs=195.9
Q ss_pred CcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
+.|+++++||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+.+ +|||||++++++.+.+..|||
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv 98 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA 98 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence 35899999999999999999843 46789999986543 456789999999998 799999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCccccCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~~~- 222 (508)
||||+|++|.+++. .+++.++..++.||+.||.|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 99 mE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 99 MPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp EECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred EeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999999999983 4899999999999999999999999 9999999999999876 89999999999754322
Q ss_pred -------------------------------CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhh
Q 010529 223 -------------------------------KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHAL 270 (508)
Q Consensus 223 -------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~ 270 (508)
.+.+||+.|+|||++.+. .++.++||||+||++|||+||+.||.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 234689999999999775 489999999999999999999988754211
Q ss_pred hhhh--------c-----------------------cchhhhhccc------------------cCCCCCHHHHHHHHHH
Q 010529 271 DMIR--------G-----------------------ENLNLLMDSH------------------LEGKFSSEEATQVVGL 301 (508)
Q Consensus 271 ~~~~--------~-----------------------~~~~~~~~~~------------------~~~~~~~~~~~~l~~l 301 (508)
+... + .......... .........++++.+|
T Consensus 253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL 332 (361)
T 4f9c_A 253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332 (361)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence 1000 0 0000000000 0000112245678999
Q ss_pred HHHhcccCCCCCCChHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+||..||.+|||+.|+++|
T Consensus 333 l~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 333 LDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHCcCChhHCcCHHHHhcC
Confidence 999999999999999999987
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-50 Score=413.27 Aligned_cols=249 Identities=18% Similarity=0.138 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHH---HHHHhccCCCCCCcceeeeeeeCCc
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKE---EAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
..++|++++.||+|+||.||+|+. .+|+.||||++.+.. ......+.+ ++.+++.++|||||++++++.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 356799999999999999999995 569999999996431 122233334 4677788899999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
+|||||||+||+|.++|.. .+.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+...
T Consensus 267 lylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999999973 467999999999999999999999999 9999999999999999999999999998665
Q ss_pred CC--CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 221 DG--KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 221 ~~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
.. .+.+||+.|||||++.+ ..|+.++|||||||++|||++|..||......... ......... ...++...+++
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~~~--~~~~p~~~S~~ 420 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTM--AVELPDSFSPE 420 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHHHC--CCCCCTTSCHH
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCC--CCCCCccCCHH
Confidence 43 45689999999999964 57999999999999999999999887643211000 001111111 12345567788
Q ss_pred HHHHHHHhcccCCCCCCC-----hHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps-----~~~il~~ 322 (508)
+.+||.+||..||.+|++ +.+|++|
T Consensus 421 a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 999999999999999998 6888887
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=414.83 Aligned_cols=248 Identities=17% Similarity=0.157 Sum_probs=209.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
++|++++.||+|+||.||+|+. .+|+.||||++......+.+.+.+|+.+|+.++|||||++++++.+...+|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 5689999999999999999995 569999999997655445667999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC--CCeEEcccCCccccCCCC---
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED--GDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~--~~~kl~Dfg~a~~~~~~~--- 223 (508)
+||+|.+++.. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999864 3457999999999999999999999999 9999999999999854 899999999998776553
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l 301 (508)
..+||+.|||||++.+..|+.++|||||||++|||++|..||.+...... +..+.... .........++++.+|
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~dl 390 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDF 390 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHhCCCCCCcccccCCCHHHHHH
Confidence 45799999999999999999999999999999999999988765322111 11111111 1111123456789999
Q ss_pred HHHhcccCCCCCCChHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L 323 (508)
|.+||..||.+|||+.|+++|-
T Consensus 391 i~~~L~~dp~~R~t~~e~l~Hp 412 (573)
T 3uto_A 391 IRKLLLADPNTRMTIHQALEHP 412 (573)
T ss_dssp HHTTSCSSGGGSCCHHHHHHST
T ss_pred HHHHccCChhHCcCHHHHhcCc
Confidence 9999999999999999999874
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-48 Score=377.98 Aligned_cols=259 Identities=26% Similarity=0.436 Sum_probs=219.8
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
...|.+.+.||+|+||.||+|++.+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred HhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence 35567888899999999999998889999999987766555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 149 PNDTLAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 118 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 196 (321)
T 2qkw_B 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196 (321)
T ss_dssp TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999999986432 235899999999999999999999999 999999999999999999999999998754321
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhh-----------hhhccchhhhhccccCCC
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-----------MIRGENLNLLMDSHLEGK 289 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 289 (508)
....||+.|+|||++.+..++.++||||||+++|+|+||+.|+...... ..........+++.....
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T 2qkw_B 197 LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276 (321)
T ss_dssp CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccc
Confidence 2345899999999998889999999999999999999999887543110 011122333344444555
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 290 FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 290 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+...+..+.+++.+||..||++|||+.+++++|+.+..
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 678889999999999999999999999999999998865
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=371.60 Aligned_cols=255 Identities=20% Similarity=0.265 Sum_probs=212.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.++|.+.+.||+|+||.||+|.. .++..||+|++........+.|.+|+.+++.++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 35678889999999999999996 46899999998665444466899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+++++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 89 IKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999965 3567999999999999999999999999 9999999999999999999999999997654321
Q ss_pred --------------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-ccchhhhhccccCC
Q 010529 224 --------------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-GENLNLLMDSHLEG 288 (508)
Q Consensus 224 --------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 288 (508)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+......... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---- 242 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR---- 242 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH----
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc----
Confidence 346889999999999999999999999999999999999776543211111 1111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
..+..+++.+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 243 YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 22334456799999999999999999999999999998753
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=380.37 Aligned_cols=254 Identities=20% Similarity=0.300 Sum_probs=209.6
Q ss_pred CCcccccccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG 138 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 138 (508)
.++|.+.+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+.+++.+ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356888999999999999999852 3457999999754321 245799999999999 899999999999999
Q ss_pred CcceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
+..|+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTE 238 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECC
Confidence 99999999999999999997532 235899999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccc
Q 010529 205 DGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGEN 277 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~ 277 (508)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..|+..... ..
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----~~ 313 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EE 313 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GG
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HH
Confidence 999999999999855432 22345678999999998899999999999999999999 8776543211 11
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
....+........+..++..+.+|+.+||..||.+|||+.+++++|+.+..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 314 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 112222222334455667889999999999999999999999999998864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=367.96 Aligned_cols=248 Identities=17% Similarity=0.241 Sum_probs=209.1
Q ss_pred CCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
...|++++.||+|+||.||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3568899999999999999999 466899999999876666677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
++|++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999953 46899999999999999999999999 999999999999999999999999998765433 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh-ccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM-DSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~ 302 (508)
...||+.|+|||++.+..++.++||||||+++|+|+||+.||........ ...+. ........+...+..+.+|+
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 250 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLIATNGTPELQNPEKLSAIFRDFL 250 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHHCSCCCSCGGGSCHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCCCccccCHHHHHHH
Confidence 45689999999999999999999999999999999999988754311100 00010 11111122445677899999
Q ss_pred HHhcccCCCCCCChHHHHHHHH
Q 010529 303 SQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+||..||.+|||+.+++++-+
T Consensus 251 ~~~l~~dp~~Rps~~ell~h~~ 272 (297)
T 3fxz_A 251 NRCLEMDVEKRGSAKELLQHQF 272 (297)
T ss_dssp HHHSCSSTTTSCCHHHHTTCGG
T ss_pred HHHccCChhHCcCHHHHhhChh
Confidence 9999999999999999998743
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=367.78 Aligned_cols=272 Identities=28% Similarity=0.463 Sum_probs=225.9
Q ss_pred CccccCHHHHHHHhcCCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcce
Q 010529 53 LFSEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANL 131 (508)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~ 131 (508)
....|++.++...+++ |.+.+.||+|+||.||+|...+++.||||++...... ....+.+|+.+++.++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~---y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDN---FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTS---SCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhc---cccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence 3457888888766554 5677888999999999999888999999999765432 23479999999999999999999
Q ss_pred eeeeeeCCcceeeeecCCCCCHHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhC---CCceeecCCCcceeeCCCC
Q 010529 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTE---GRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 132 ~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~---~~iiH~Dikp~Nill~~~~ 206 (508)
++++...+..++||||+++++|.+++.... ...+++..+..|+.|++.||.|||+. + |+||||||+|||++.++
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEF 171 (326)
T ss_dssp CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTC
T ss_pred EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCC
Confidence 999999999999999999999999997532 23499999999999999999999999 8 99999999999999999
Q ss_pred CeEEcccCCccccCCC-----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchh------------
Q 010529 207 DPRLSCFGLMKNSMDG-----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHA------------ 269 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~------------ 269 (508)
.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|+||+.|+....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 251 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251 (326)
T ss_dssp CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence 9999999999865432 23358999999999988889999999999999999999998864221
Q ss_pred -hhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 270 -LDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 270 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
...........+.+.......+...+..+.+++.+||+.||.+|||+.+++++|+....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp HTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 11112233444445555566778889999999999999999999999999999987543
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=365.26 Aligned_cols=261 Identities=19% Similarity=0.257 Sum_probs=206.0
Q ss_pred cCCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
..+.+|++.+.||+|+||.||+|+. +++.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 4567889999999999999999987 56779999997654322 34789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCC-CCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 145 AEYMPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
|||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999999999964221 24999999999999999999999986 4999999999999999999999999998754433
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||........ ...+.........+...++.+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV----VAAVGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHHSCCCCCCCTTSCHHH
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCCCCCCccCCHHH
Confidence 345789999999999998899999999999999999999987654211110 111111122233455567789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
.+|+.+||..||.+|||+.++++.|+.+......
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999865433
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-47 Score=370.49 Aligned_cols=255 Identities=21% Similarity=0.235 Sum_probs=209.1
Q ss_pred CCcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
...|.+.+.||+|+||.||+|.+. .+..||||++...... ..+.|.+|+.+++.++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 456888999999999999999964 3446999999754322 24579999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||++|++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 128 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 128 VTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred EeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999964 4457999999999999999999999999 9999999999999999999999999998654432
Q ss_pred -------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 224 -------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 224 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+...... .....+........+..++
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 280 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSVEEGYRLPAPMGCP 280 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCC
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcCCCCCCCCCcC
Confidence 1234567999999998899999999999999999999 88776442211 1111111222233445567
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
..+.+|+.+||..||.+|||+.++++.|+.+....
T Consensus 281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 78999999999999999999999999999987643
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=356.68 Aligned_cols=253 Identities=23% Similarity=0.304 Sum_probs=211.8
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.++|++++.||+|+||.||+|...+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 45788999999999999999998888889999997544 34578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999964 4456999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...+|+.|+|||++.+..++.++||||||+++|+|+| |..|+....... ....+........+...+..+.+++
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li 240 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDISTGFRLYKPRLASTHVYQIM 240 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHhcCccCCCCCcCCHHHHHHH
Confidence 3345677999999998899999999999999999999 776654321111 1111111122223444567899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+||..||.+|||+.+++++|+.+...
T Consensus 241 ~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 241 NHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999998653
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-46 Score=361.50 Aligned_cols=264 Identities=18% Similarity=0.215 Sum_probs=217.5
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCC
Q 010529 55 SEFSFLDLRAATNNFSS-------DNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRK 126 (508)
Q Consensus 55 ~~~~~~~~~~~~~~~~~-------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 126 (508)
..+++.++..++...-. +.....||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788898888865432 455668899999999999965 6999999999876666677899999999999999
Q ss_pred CCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC
Q 010529 127 RLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG 206 (508)
Q Consensus 127 nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~ 206 (508)
||+++++++...+..++||||++|++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999984 457999999999999999999999999 99999999999999999
Q ss_pred CeEEcccCCccccCCC----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh
Q 010529 207 DPRLSCFGLMKNSMDG----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM 282 (508)
Q Consensus 207 ~~kl~Dfg~a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~ 282 (508)
.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.|+........ ...+.
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~----~~~~~ 254 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA----MKRLR 254 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHH
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHh
Confidence 9999999998765432 345789999999999988899999999999999999999988754321110 11111
Q ss_pred cccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 283 DSHL-EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 283 ~~~~-~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.... ........+..+.+++.+||..||.+|||+.+++++.+-.
T Consensus 255 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~ 299 (321)
T 2c30_A 255 DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL 299 (321)
T ss_dssp HSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred cCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence 1100 0111234567799999999999999999999999886544
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-47 Score=368.54 Aligned_cols=249 Identities=18% Similarity=0.239 Sum_probs=208.4
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.....|.+++.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3456789999999999999999995 67999999999754322 24568899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp EECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999999964 456999999999999999999999999 999999999999999999999999999765543
Q ss_pred --CccccCCCCCCccccccCCcC-ccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVI-PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+..++ .++|||||||++|+|+||+.||......... ..+... ....+...+.++.
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~ 242 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR----ERVLRG--KYRIPFYMSTDCE 242 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHHH
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHHhC--CCCCCCCCCHHHH
Confidence 345789999999999887765 7999999999999999999887543221111 111111 1123444567899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+|+.+||..||.+|||+.++++|-+
T Consensus 243 ~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 243 NLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp HHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHHCCCChhHCcCHHHHhcCHh
Confidence 9999999999999999999998743
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=356.72 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=208.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
..++|++++.||+|+||.||+|.+.++..||||++.... ...+.+.+|++++..++||||+++++++.+....++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 345788999999999999999999888889999997554 3457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----- 222 (508)
+++++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 101 MANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp CTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred cCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 999999999964 2456999999999999999999999999 999999999999999999999999999765432
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....+|+.|+|||++.+..++.++||||||+++|+|+| |+.|+...... .....+........+...++.+.+|
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l 253 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRPHLASEKVYTI 253 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhcccCCCCCCcCCHHHHHH
Confidence 22345678999999998889999999999999999999 88765432111 1111111122222334456789999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+||..||.+|||+.+++++|..+..
T Consensus 254 i~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 254 MYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 999999999999999999999998864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=375.86 Aligned_cols=254 Identities=24% Similarity=0.337 Sum_probs=210.2
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+.++|.+.+.||+|+||.||+|++. +++.||||+++..... ....|.+|+.+++.++||||+++++++...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3456788999999999999999975 6889999998754321 2346889999999999999999999999989999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC--
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 192 ELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp ECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999964 3456999999999999999999999999 9999999999999999999999999997654331
Q ss_pred ----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 224 ----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 224 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
...+++.|+|||++.++.++.++||||||+++|||+| |..|+..... ......+........+..++..+
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l 344 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-----QQTREFVEKGGRLPCPELCPDAV 344 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-----HHHHHHHHTTCCCCCCTTCCHHH
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHH
Confidence 1234667999999998899999999999999999999 7766543211 11112222222233445567789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 345 ~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 345 FRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999998864
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=377.38 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=211.5
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCC-cceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-ERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-~~~lv~E 146 (508)
+.++|.+++.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.+|++++||||+++++++.... ..+||||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4567888999999999999999985 6689999997654 4578999999999999999999999987665 7899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 225 (508)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 999999999997655556899999999999999999999999 999999999999999999999999999855433 233
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
.+++.|+|||++.+..++.++||||||+++|||+| |+.|+.... .......+........+..+++.+.+||.+
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEKGYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 56789999999999999999999999999999999 887765321 111112222222334455677889999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhhcC
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
||..||.+|||+.++++.|+.+...
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999998653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=354.18 Aligned_cols=253 Identities=20% Similarity=0.292 Sum_probs=210.0
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.++|++++.||+|+||.||+|...++..||||++.... ...+.+.+|+.++.+++||||+++++++......++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35688899999999999999998888889999997554 34577999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----- 223 (508)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 163 (268)
T 3sxs_A 86 SNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163 (268)
T ss_dssp TTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred CCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence 99999999964 3446999999999999999999999999 9999999999999999999999999998655442
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...+|+.|+|||++.+..++.++||||||+++|+|+| |..|+....... ....+........+...++.+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 238 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLKVSQGHRLYRPHLASDTIYQIM 238 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHHHHcCCCCCCCCcChHHHHHHH
Confidence 2234567999999998889999999999999999999 876654321111 1111111111222334467799999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+||+.||.+|||+.+++++|+.+...
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 239 YSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 999999999999999999999998754
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=364.06 Aligned_cols=246 Identities=19% Similarity=0.262 Sum_probs=207.6
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.++|++++.||+|+||.||+|+.. +++.||||+++.. .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467889999999999999999954 6899999999653 233456789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC---
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD--- 221 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~--- 221 (508)
|||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999863 457899999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 222 -GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 222 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...++++.+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILME--EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHH
Confidence 2345789999999999988999999999999999999999988754321111 1111111 11234456778999
Q ss_pred HHHHhcccCCCCCC-----ChHHHHHHH
Q 010529 301 LASQCLQYEPRERP-----STKNLVVTL 323 (508)
Q Consensus 301 l~~~cl~~~p~~Rp-----s~~~il~~L 323 (508)
|+.+||..||.+|| ++.++++|-
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 99999999999999 899999883
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=360.86 Aligned_cols=258 Identities=20% Similarity=0.315 Sum_probs=208.4
Q ss_pred CcccccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
.+|++++.||+|+||.||+|++ .+++.||||++........+.+.+|+.+++.++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5688999999999999999984 35889999999765444456799999999999999999999998653 4589
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999999965 3456999999999999999999999999 999999999999999999999999999865433
Q ss_pred C-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh---hcc--------chhhhhcc
Q 010529 223 K-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI---RGE--------NLNLLMDS 284 (508)
Q Consensus 223 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~---~~~--------~~~~~~~~ 284 (508)
. ...++..|+|||++.+..++.++||||||+++|+|+||..|+........ ... .....+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 2 22356679999999988999999999999999999999877654322111 000 11111222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
......+..++.++.+|+.+||..||.+|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 223334556678899999999999999999999999999998754
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=365.20 Aligned_cols=255 Identities=16% Similarity=0.232 Sum_probs=203.6
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc----ceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE----RLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~----~~lv 144 (508)
..+|++++.||+|+||.||+|+.. ++.||||++.... .....+..|+.++++++||||+++++++..... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 457889999999999999999875 6789999996543 223456779999999999999999999987543 6999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC----------CCceeecCCCcceeeCCCCCeEEcccC
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE----------GRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~----------~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
|||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|||
T Consensus 101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999953 4599999999999999999999999 8 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhh--------hc
Q 010529 215 LMKNSMDG------KSYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI--------RG 275 (508)
Q Consensus 215 ~a~~~~~~------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~--------~~ 275 (508)
+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ..
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99754432 23568999999999976 3567789999999999999999988654211000 00
Q ss_pred cchhh----hhccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 276 ENLNL----LMDSHLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 276 ~~~~~----~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
..... .......+.. ....+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00111 1111111111 224567799999999999999999999999999998754
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=360.85 Aligned_cols=256 Identities=24% Similarity=0.341 Sum_probs=209.4
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-C-------CEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-R-------QWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
.++|.+.+.||+|+||.||+|+... + ..||+|++........+.+.+|+.+++.++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3567889999999999999999543 4 4699999976655556789999999999999999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC--------eEEcc
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD--------PRLSC 212 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~--------~kl~D 212 (508)
.++||||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|
T Consensus 87 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp CEEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred CEEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999964 3445999999999999999999999999 999999999999988877 99999
Q ss_pred cCCccccCCCCccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 213 FGLMKNSMDGKSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 213 fg~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
||++..........+|+.|+|||++.+ ..++.++||||||+++|+|+||..||......... ...... ....+
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~----~~~~~~--~~~~~ 238 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK----LQFYED--RHQLP 238 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH----HHHHHT--TCCCC
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH----HHHhhc--cCCCC
Confidence 999987766666778999999999987 67899999999999999999977665543211110 011111 11122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
...+.++.+|+.+||+.||.+|||+.+++++|+.+......
T Consensus 239 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 239 APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 23356689999999999999999999999999998764433
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=355.84 Aligned_cols=257 Identities=16% Similarity=0.193 Sum_probs=206.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.+|++++.||+|+||.||+|+. .++..||||++....... .+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4688999999999999999995 468899999986544333 357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||++|++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999999999964 357999999999999999999999999 999999999999999999999999999765433
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||.................. ......+...+..+.+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 246 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSLSN 246 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHHHH
Confidence 2346899999999999988999999999999999999999887543211111000000000 0001122334677999
Q ss_pred HHHHhcccCCCCCC-ChHHHHHHHHHhhcCC
Q 010529 301 LASQCLQYEPRERP-STKNLVVTLARLQTKS 330 (508)
Q Consensus 301 l~~~cl~~~p~~Rp-s~~~il~~L~~~~~~~ 330 (508)
++.+||..||.+|| ++.++.+.|..+....
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 99999999999998 8999999998876543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=370.07 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=200.1
Q ss_pred CcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
..|.+.+.||+|+||.||+|+.. ++..||||+++..... ..+.|.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 46788899999999999999964 5778999999754321 245799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999999964 3457999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 ------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
...+++.|+|||++.+..++.++||||||+++|||++ |+.|+...... .....+........+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~ 277 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEGYRLPPPMDCPA 277 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHHHTTEECCCCTTCBH
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccccH
Confidence 1234678999999998899999999999999999998 88776542211 11112222222233445677
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 278 ~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999998754
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=364.31 Aligned_cols=245 Identities=18% Similarity=0.168 Sum_probs=204.9
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
+.|.+++.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+....+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 34788999999999999999954 6899999999765432 2467999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC----CeEEcccCCccc
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG----DPRLSCFGLMKN 218 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~Dfg~a~~ 218 (508)
+||||++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++..
T Consensus 92 lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 92 LILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999996 4567999999999999999999999999 99999999999998776 799999999986
Q ss_pred cCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----
Q 010529 219 SMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS---- 291 (508)
Q Consensus 219 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 291 (508)
.... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........ ...+... ...++
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~----~~~i~~~--~~~~~~~~~ 242 (361)
T 2yab_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANITAV--SYDFDEEFF 242 (361)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTT--CCCCCHHHH
T ss_pred cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhc--CCCCCchhc
Confidence 6543 345789999999999988999999999999999999999988754321111 1111111 01112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...+..+.+|+.+||..||.+|||+.++++|-
T Consensus 243 ~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 12357789999999999999999999999773
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-46 Score=379.02 Aligned_cols=253 Identities=19% Similarity=0.271 Sum_probs=211.6
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|+.++||||+++++++. .+..+|||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 45678889999999999999999888889999997644 35678999999999999999999999986 66789999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 343 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence 9999999997544447899999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...+++.|+|||++.+..++.++||||||+++|||+| |+.|+...... .....+........+..++..+.+||
T Consensus 344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li 418 (454)
T 1qcf_A 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERGYRMPRPENCPEELYNIM 418 (454)
T ss_dssp SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2335678999999998899999999999999999999 88776542111 11111122222333455678899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+||..||.+|||+.+|+..|+.+...
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999998654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=349.85 Aligned_cols=272 Identities=29% Similarity=0.486 Sum_probs=222.0
Q ss_pred CccccCHHHHHHHhcCCCcccc---cccCCCCcccEEEEEEEcCCCEEEEEEecCCCC----CChhHHHHHHHHhccCCC
Q 010529 53 LFSEFSFLDLRAATNNFSSDNI---VSESGEKAANVVYKGRLENRQWIAVKKFTKVAW----PDPTQFKEEAEGVGKLRR 125 (508)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~---~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h 125 (508)
....|++.++...+++|+...+ .+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 3567999999999999987532 36789999999999987 577899999865321 124579999999999999
Q ss_pred CCCcceeeeeeeCCcceeeeecCCCCCHHHHhhcc-CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW-EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 126 ~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
|||+++++++.+.+..++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 99999999999999999999999999999998643 2346999999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----
Q 010529 205 DGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI----- 273 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~----- 273 (508)
++.+||+|||++...... ....||+.|+|||++.+ .++.++||||||+++|+|+||..|+........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23468899999998864 588999999999999999999977653211100
Q ss_pred -----hccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 274 -----RGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 274 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
....+...++... ...+...+..+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 0011122222222 33567788899999999999999999999999999998853
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-46 Score=365.70 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=211.3
Q ss_pred HhcCCCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeee
Q 010529 65 ATNNFSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCA 137 (508)
Q Consensus 65 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~ 137 (508)
..-..+.|.+++.||+|+||.||+|+.. +++.||||+++...... .+.+.+|+.+++.++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445577889999999999999999964 34789999997543222 4579999999999999999999999999
Q ss_pred CCcceeeeecCCCCCHHHHhhccC----------------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecC
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWE----------------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Di 195 (508)
.+..++||||+++++|.+++.... ...+++.+++.|+.||+.||.|||+++ |+||||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dl 200 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDL 200 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCC
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCC
Confidence 999999999999999999997532 157999999999999999999999999 999999
Q ss_pred CCcceeeCCCCCeEEcccCCccccCC------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCch
Q 010529 196 NAYRVLFDEDGDPRLSCFGLMKNSMD------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSH 268 (508)
Q Consensus 196 kp~Nill~~~~~~kl~Dfg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~ 268 (508)
||+|||++.++.+||+|||++..... .....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999875432 223456788999999988889999999999999999999 88776442
Q ss_pred hhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 269 ALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.... ....+........+..++..+.+|+.+||..||.+|||+.+++++|+.+....
T Consensus 281 ~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 AHEE-----VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp CHHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ChHH-----HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2111 11111111112334456678999999999999999999999999999987543
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=363.75 Aligned_cols=256 Identities=16% Similarity=0.134 Sum_probs=199.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
...+|++++.||+|+||.||+++.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 4567899999999999999999964 689999999976543 34679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC--eEEcccCCccccCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD--PRLSCFGLMKNSMD--- 221 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~--~kl~Dfg~a~~~~~--- 221 (508)
|++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999863 456999999999999999999999999 999999999999987765 99999999874332
Q ss_pred CCccccCCCCCCccccccCCcCcc-ccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 222 GKSYSTNLAYTPPEYLKNGRVIPE-SVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~~~~~~~~-~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+.............++.+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 244578999999999988777655 8999999999999999988754321100011111111111111112234677999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
|+.+||..||.+|||+.++++|-+-..
T Consensus 254 li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred HHHHHccCChhHCcCHHHHHhCcchhc
Confidence 999999999999999999999966543
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=380.66 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=214.2
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
..+|.+.+.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.+|++++|||||+++++|...+..+|||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567888999999999999999765 8889999997554 3467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK---- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 223 (508)
+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 99999999997655667999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 224 -SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
...+++.|+|||++.+..++.++|||||||++|||+| |..|+.... ...+...+........+..++..+.+|
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~l 451 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVYEL 451 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 2234568999999998899999999999999999999 776654321 111222233333334455667889999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
|.+||+.||.+|||+.+|++.|+.+..
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998754
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-46 Score=368.02 Aligned_cols=255 Identities=21% Similarity=0.285 Sum_probs=207.7
Q ss_pred CCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
...|.+++.||+|+||.||+|++. ++..||||++..... .....+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356788999999999999999953 366899999965432 2244789999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccC-----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC---CeEEccc
Q 010529 142 LLVAEYMPNDTLAKHLFHWE-----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG---DPRLSCF 213 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~Df 213 (508)
++||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCC
Confidence 99999999999999997532 245899999999999999999999999 99999999999998555 5999999
Q ss_pred CCcccc------CCCCccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhcccc
Q 010529 214 GLMKNS------MDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHL 286 (508)
Q Consensus 214 g~a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (508)
|+++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..|+...... .....+....
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~~i~~~~ 303 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFVTSGG 303 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTC
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCC
Confidence 998643 22334567889999999998899999999999999999998 77665432111 1111111222
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
....+..++..+.+|+.+||+.||.+|||+.+|+++|+.+...
T Consensus 304 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 304 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 2233445567899999999999999999999999999998754
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=367.71 Aligned_cols=246 Identities=17% Similarity=0.120 Sum_probs=198.2
Q ss_pred cccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 73 NIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..+|||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3356799999999999995 568999999998655445678999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee--CCCCCeEEcccCCccccCCC---Cccc
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF--DEDGDPRLSCFGLMKNSMDG---KSYS 226 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill--~~~~~~kl~Dfg~a~~~~~~---~~~~ 226 (508)
+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++...... ....
T Consensus 172 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 172 ELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp EEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 99998864 4457999999999999999999999999 9999999999999 67788999999999866543 3346
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC--CCCCHHHHHHHHHHHHH
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE--GKFSSEEATQVVGLASQ 304 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~ 304 (508)
||+.|+|||++.+..++.++|||||||++|+|++|..||........ ...+...... .......++++.+|+.+
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 325 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET----LNNILACRWDLEDEEFQDISEEAKEFISK 325 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCSCSGGGTTSCHHHHHHHHT
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhccCCCChhhhccCCHHHHHHHHH
Confidence 89999999999888899999999999999999999988754321111 1111111110 11112346789999999
Q ss_pred hcccCCCCCCChHHHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~ 324 (508)
||..||.+|||+.+++++-+
T Consensus 326 ~L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 326 LLIKEKSWRISASEALKHPW 345 (373)
T ss_dssp TSCSSGGGSCCHHHHHHSHH
T ss_pred HcCCChhhCCCHHHHhcCcC
Confidence 99999999999999999743
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=357.08 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..++|++++.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 356789999999999999999995 46899999999653 22345678899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 84 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 84 IMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp EECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 9999999999999973 457999999999999999999999999 999999999999999999999999999865543
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... ..++...+.++.+|+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~~--~~~p~~~~~~~~~li 234 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM----KTYEKILNAE--LRFPPFFNEDVKDLL 234 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHHCC--CCCCTTSCHHHHHHH
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHHhCC--CCCCCCCCHHHHHHH
Confidence 3567899999999999889999999999999999999999887543211 1111122111 123445567899999
Q ss_pred HHhcccCCCCCC-----ChHHHHHHH
Q 010529 303 SQCLQYEPRERP-----STKNLVVTL 323 (508)
Q Consensus 303 ~~cl~~~p~~Rp-----s~~~il~~L 323 (508)
.+||..||.+|| ++.++++|-
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 999999999999 899998873
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=355.87 Aligned_cols=248 Identities=15% Similarity=0.169 Sum_probs=198.4
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--------------------------ChhHHHHHHHHh
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--------------------------DPTQFKEEAEGV 120 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l 120 (508)
.+++|.+++.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 456789999999999999999995 56889999999654311 135689999999
Q ss_pred ccCCCCCCcceeeeeee--CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCc
Q 010529 121 GKLRRKRLANLIGYCCA--GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198 (508)
Q Consensus 121 ~~l~h~nIv~~~~~~~~--~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~ 198 (508)
+.++||||+++++++.+ ....++||||+++++|.+++ ....+++..+..++.||+.||.|||+++ |+||||||+
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~ 166 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPS 166 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHH
Confidence 99999999999999986 56789999999999998876 4567999999999999999999999999 999999999
Q ss_pred ceeeCCCCCeEEcccCCccccCCC----CccccCCCCCCccccccCC---cCccccchhhHHHHHHHHhCCCCCCchhhh
Q 010529 199 RVLFDEDGDPRLSCFGLMKNSMDG----KSYSTNLAYTPPEYLKNGR---VIPESVIYSFGTVLLDLLSGKHIPPSHALD 271 (508)
Q Consensus 199 Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~ 271 (508)
|||++.++.+||+|||++...... ....||+.|+|||++.+.. ++.++||||||+++|+|++|+.||......
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 999999999999999999865543 2356899999999997654 377899999999999999999887543211
Q ss_pred hhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 272 MIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
... ..+.............+..+.+|+.+||..||.+|||+.++++|-
T Consensus 247 ~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp 294 (298)
T 2zv2_A 247 CLH----SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294 (298)
T ss_dssp HHH----HHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred HHH----HHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence 110 111111111111223567799999999999999999999998764
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=360.03 Aligned_cols=253 Identities=18% Similarity=0.263 Sum_probs=204.9
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCE----EEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQW----IAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
-.+|++++.||+|+||.||+|++ .++.. ||+|.+.... ......+.+|+.+++.++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35688999999999999999995 34544 7888875433 233457889999999999999999999985 56789
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+.+++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999964 3457999999999999999999999999 999999999999999999999999999865433
Q ss_pred ------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 ------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
....+++.|+|||++.+..++.++||||||+++|+|+| |..|+.... .......+........+...+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-----LAEVPDLLEKGERLAQPQICT 243 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----TTHHHHHHHTTCBCCCCTTBC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-----HHHHHHHHHcCCCCCCCCcCc
Confidence 23356778999999998899999999999999999999 887765321 111122222222223344456
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
..+.+++.+||..||.+|||+.+++++|+.+...
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 6788999999999999999999999999998653
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-46 Score=361.10 Aligned_cols=251 Identities=18% Similarity=0.160 Sum_probs=203.8
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+++|++++.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467899999999999999999965 689999999865432 224678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999986 4557999999999999999999999999 999999999999999999999999999754322
Q ss_pred --CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||....... ...................+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhcccccCCccccCCHHHH
Confidence 34578999999999987765 779999999999999999998875422110 001111111111111234567789
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+|+.+||..||.+|||+.+++++-+-
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred HHHHHHccCChhhCcCHHHHhhChhh
Confidence 99999999999999999999988544
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=359.33 Aligned_cols=249 Identities=15% Similarity=0.187 Sum_probs=207.4
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++.|.+++.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467899999999999999999954 58889999986432 2345789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC--CCCeEEcccCCccccCCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE--DGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~-- 223 (508)
|+|++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999953 3347999999999999999999999999 999999999999986 7899999999998765543
Q ss_pred -ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----HHHHHHH
Q 010529 224 -SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS----SEEATQV 298 (508)
Q Consensus 224 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 298 (508)
...||+.|+|||++.+..++.++||||||+++|+|++|..||........ ...+..... .++ ...+.++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~--~~~~~~~~~~s~~~ 234 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAEY--TFDEEAFKEISIEA 234 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCC--CCCHHHHTTSCHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH----HHHHHcCCC--CCChhhhccCCHHH
Confidence 34689999999999888889999999999999999999988754321111 111111111 111 1346779
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+|+.+||..||.+|||+.++++|-+-.
T Consensus 235 ~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 235 MDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 9999999999999999999999986644
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=358.33 Aligned_cols=257 Identities=14% Similarity=0.156 Sum_probs=207.7
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.+|.+++.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++.+ +||||+++++++......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 4678899999999999999995 678999999987543 345799999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC-----eEEcccCCccccCCC
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD-----PRLSCFGLMKNSMDG 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~-----~kl~Dfg~a~~~~~~ 222 (508)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 9999999965 3567999999999999999999999999 999999999999998887 999999999754332
Q ss_pred -----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC--
Q 010529 223 -----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK-- 289 (508)
Q Consensus 223 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (508)
....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......+........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-KERYQKIGDTKRATPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-HHHHHHHHHHHHHSCHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-HHHHHHHHhhhccCCHH
Confidence 345789999999999999999999999999999999999988754211000 000011100000000
Q ss_pred -CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCCC
Q 010529 290 -FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333 (508)
Q Consensus 290 -~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~ 333 (508)
.....+ ++.+++..||..||.+||++.+|++.|+.+.......
T Consensus 243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 001123 8999999999999999999999999999887655443
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=349.47 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=198.6
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC----ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP----DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+++|.+.+.||+|+||.||+|... ++.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 4678899999999999999999975 778999998754322 24678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC--CceeecCCCcceeeCC--------CCCeEEccc
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG--RPLYHDLNAYRVLFDE--------DGDPRLSCF 213 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--~iiH~Dikp~Nill~~--------~~~~kl~Df 213 (508)
||||+++++|.+++ ....+++..++.++.|++.||.|||+++ +++||||||+|||++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999998 4567999999999999999999999987 3789999999999985 778999999
Q ss_pred CCccccCCC--CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 214 GLMKNSMDG--KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 214 g~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
|++...... ....||+.|+|||++.+..++.++||||||+++|+|+||+.|+....... ..............+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA----VAYGVAMNKLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH----HHHHHHTSCCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHhhhcCCCCCCCC
Confidence 999755443 34568999999999998889999999999999999999998865421111 111112222223344
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
...+..+.+++.+||..||.+|||+.+++++|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 55677899999999999999999999999999764
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=355.05 Aligned_cols=249 Identities=19% Similarity=0.245 Sum_probs=197.9
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhcc--CCCCCCcceeeeeeeC----Cccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK--LRRKRLANLIGYCCAG----DERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~~~~~~~~~----~~~~l 143 (508)
.+|++++.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++... ...++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4688999999999999999998 6788999998643 34566777777766 7999999999997653 45799
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHH--------hCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN--------TEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH--------~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
||||+++++|.+++ ....+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999 4567999999999999999999999 888 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCCCCCccccccC------CcCccccchhhHHHHHHHHhC----------CCCCCchhhh
Q 010529 216 MKNSMDG--------KSYSTNLAYTPPEYLKNG------RVIPESVIYSFGTVLLDLLSG----------KHIPPSHALD 271 (508)
Q Consensus 216 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg----------~~~~~~~~~~ 271 (508)
+...... ....||+.|+|||++.+. .++.++||||||+++|||+|| ..|+......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8654332 223689999999999876 556799999999999999999 6555432111
Q ss_pred hhhccchhhhh-ccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 272 MIRGENLNLLM-DSHLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 272 ~~~~~~~~~~~-~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
........... ........ ....+..+.+|+.+||..||.+|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 00001111111 11111112 235678899999999999999999999999999876
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=366.85 Aligned_cols=251 Identities=16% Similarity=0.239 Sum_probs=204.8
Q ss_pred cCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcc
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDER 141 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~ 141 (508)
-...+|++++.||+|+||.||+|+.. +++.||||++++... .....+..|..++.++ +|||||++++++.+.+..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 34567899999999999999999964 588899999976432 2345688999999887 899999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
||||||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 129 ~lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999999863 457999999999999999999999999 99999999999999999999999999975322
Q ss_pred ----CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-hccc----hhhhhccccCCCCCH
Q 010529 222 ----GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-RGEN----LNLLMDSHLEGKFSS 292 (508)
Q Consensus 222 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 292 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .... ...+... ...++.
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~ 283 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPR 283 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--CCCCCT
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--ccCCCC
Confidence 2456789999999999999999999999999999999999988743211000 0001 1111111 123445
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCh------HHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPST------KNLVVT 322 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~------~~il~~ 322 (508)
..+.++.+|+.+||..||.+||++ .+|++|
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 567889999999999999999986 577766
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=371.83 Aligned_cols=253 Identities=16% Similarity=0.125 Sum_probs=196.2
Q ss_pred CCccccc-ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhcc-CCCCCCcceeeeeee----CCcc
Q 010529 69 FSSDNIV-SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK-LRRKRLANLIGYCCA----GDER 141 (508)
Q Consensus 69 ~~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~~~~~~~~----~~~~ 141 (508)
+.+|.++ +.||.|+||.||+|.. .+++.||||++.. ...+.+|+.++.+ .+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456666 5799999999999995 4688999999863 3568889998755 489999999999865 5678
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccc
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKN 218 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~ 218 (508)
|||||||+||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 99999999999999997544557999999999999999999999999 999999999999987 78999999999986
Q ss_pred cCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHH
Q 010529 219 SMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSE 293 (508)
Q Consensus 219 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 293 (508)
.... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...............+..... .......
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 293 (400)
T 1nxk_A 214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293 (400)
T ss_dssp CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence 5443 3456899999999999889999999999999999999999887543211100001111111111 1111234
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+.++.+|+.+||..||.+|||+.++++|-+-..
T Consensus 294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 5678999999999999999999999999976553
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=356.37 Aligned_cols=252 Identities=21% Similarity=0.254 Sum_probs=199.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
-.++|++++.||+|+||+||+|+..+++.||||++....... ...+.+|+.++++++||||+++++++.++...++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 356789999999999999999998889999999997543222 357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 99 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 99 EFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp ECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred cCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 9997 578887764 4456999999999999999999999999 999999999999999999999999999765432
Q ss_pred -CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccc-----------hh------hhhc
Q 010529 223 -KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGEN-----------LN------LLMD 283 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~-----------~~------~~~~ 283 (508)
....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||............ .. ....
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 33467999999999876 56899999999999999999999887543211100000 00 0000
Q ss_pred ccc--CCC-----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 SHL--EGK-----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ~~~--~~~-----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
... ... .....++++.+|+.+||..||.+|||+.++++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 000 011235678999999999999999999999987
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=364.60 Aligned_cols=249 Identities=17% Similarity=0.187 Sum_probs=205.3
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
++++|++++.||+|+||.||+|+. .+++.||||++... .......+.+|+.+++.++|||||++++++.+.+..|+
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 467889999999999999999995 45889999998643 22345678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+.||+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++......
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999996 4567999999999999999999999999 999999999999999999999999999865443
Q ss_pred --CccccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ......+.. ....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~~~~~~~--~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFET--TVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-HHHHHHHHH--CCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-HHHHHHHhh--cccCCCCcCCHH
Confidence 45678999999999864 4589999999999999999999988753211000 000011111 112334456788
Q ss_pred HHHHHHHhcccCCCCCCC-hHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPS-TKNLVVT 322 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps-~~~il~~ 322 (508)
+.+|+.+||..||.+||+ +.+++.|
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 7777665
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=366.64 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=210.9
Q ss_pred CCcccccccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG 138 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 138 (508)
...|.+.+.||+|+||.||+|+.. .+..||||++...... ....+.+|+++++.+ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457888999999999999999952 2357999999755322 235789999999999 999999999999999
Q ss_pred CcceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
+..++||||+++++|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTE 226 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECT
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcC
Confidence 99999999999999999997533 245999999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccc
Q 010529 205 DGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGEN 277 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~ 277 (508)
++.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+...... .
T Consensus 227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-----~ 301 (382)
T 3tt0_A 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----E 301 (382)
T ss_dssp TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----H
T ss_pred CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----H
Confidence 999999999999865432 23345778999999999999999999999999999999 87776432211 1
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
....+........+..++.++.+|+.+||..||.+|||+.+++++|+.+....
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 302 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11222222233334456778999999999999999999999999999987543
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=359.91 Aligned_cols=247 Identities=19% Similarity=0.198 Sum_probs=207.6
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+..|.+++.||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 457889999999999999999995 67899999998643 12234579999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+ +|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 6889888863 457999999999999999999999999 999999999999999999999999999865543
Q ss_pred --CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSEEATQ 297 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 297 (508)
....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...... .+..... ....+...++.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~~s~~ 234 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--------NLFKKVNSCVYVMPDFLSPG 234 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--------TCBCCCCSSCCCCCTTSCHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHcCCCCCcccCCHH
Confidence 34578999999999988776 68999999999999999999887543211 1111111 11234445678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+.+|+.+||..||.+|||+.+++++-+--
T Consensus 235 ~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 263 (336)
T 3h4j_B 235 AQSLIRRMIVADPMQRITIQEIRRDPWFN 263 (336)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHhChhhc
Confidence 99999999999999999999999986653
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=351.59 Aligned_cols=251 Identities=18% Similarity=0.209 Sum_probs=200.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
++|++++.||+|+||+||+|+. .+++.||||++....... ...+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5789999999999999999996 468999999997654332 3678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+.+ +|.+.+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9975 56565543 4567999999999999999999999999 999999999999999999999999999765432
Q ss_pred CccccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh---------------c---
Q 010529 223 KSYSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM---------------D--- 283 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~---------------~--- 283 (508)
....+|+.|+|||++.+.. ++.++||||||+++|+|+||..|+............+.... +
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3456789999999997765 79999999999999999999887543211000000000000 0
Q ss_pred ------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 284 ------SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 284 ------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 284 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence 0000011224567789999999999999999999999873
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=366.32 Aligned_cols=246 Identities=19% Similarity=0.251 Sum_probs=203.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
..++|++++.||+|+||.||+|+. .+++.||||+++.. .......+.+|..++..+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 467889999999999999999995 45899999999653 223456788999999988 7999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
|||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 101 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999999964 457999999999999999999999999 999999999999999999999999999854322
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..++...+..+
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~~~~~ 251 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDE--VVYPTWLHEDA 251 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCC--CCCCTTSCHHH
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH----HHHHHcCC--CCCCCCCCHHH
Confidence 345789999999999988899999999999999999999988754321111 11111111 12344466789
Q ss_pred HHHHHHhcccCCCCCCCh------HHHHHH
Q 010529 299 VGLASQCLQYEPRERPST------KNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~------~~il~~ 322 (508)
.+|+.+||..||.+||++ .++++|
T Consensus 252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 999999999999999998 788877
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=375.29 Aligned_cols=254 Identities=24% Similarity=0.313 Sum_probs=208.0
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+.|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 35678889999999999999999888889999997654 346789999999999999999999999865 6789999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 339 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence 9999999996544456999999999999999999999999 999999999999999999999999999865432 1
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...+++.|+|||++.+..++.++||||||+++|||+| |+.|+...... .....+........+..++..+.+|+
T Consensus 340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li 414 (452)
T 1fmk_A 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHDLM 414 (452)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2335678999999998899999999999999999999 77766432111 11111122222334556678899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.+||..||.+|||+.++++.|+.+....
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 9999999999999999999999986543
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=348.22 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=210.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeC--Cccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~l 143 (508)
.+++|.+++.||+|+||.||+|+.. ++.||||++....... .+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4667899999999999999999985 7779999997654322 35799999999999999999999999876 77899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
||||+++++|.+++.......+++..++.|+.||+.||.|||+.+ .++||||||+|||++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 999999999999997644456999999999999999999999875 489999999999999999999998888654332
Q ss_pred CccccCCCCCCccccccCCcCc---cccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIP---ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~---~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....+|+.|+|||++.+..++. ++||||||+++|+|+||+.|+........ .............+...+..+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCCCCCCHHHH
Confidence 3457899999999998765544 79999999999999999988654321111 1122222233344556677899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+++.+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999998864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=355.39 Aligned_cols=244 Identities=17% Similarity=0.149 Sum_probs=203.7
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.|.+.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.+++.++||||+++++++......++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4788899999999999999964 5899999999764332 34679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC----CeEEcccCCcccc
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG----DPRLSCFGLMKNS 219 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~Dfg~a~~~ 219 (508)
||||++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999996 4567999999999999999999999999 99999999999998887 7999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----H
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS----S 292 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 292 (508)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..||........ ...+... ...++ .
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~ 242 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANVSAV--NYEFEDEYFS 242 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHHT--CCCCCHHHHT
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHhc--CCCcCccccc
Confidence 433 345689999999999888999999999999999999999988754321111 0011000 01111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
..+..+.+|+.+||..||.+|||+.++++|-
T Consensus 243 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 2356789999999999999999999999874
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=356.37 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=209.8
Q ss_pred CCcccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
..+|.+.+.||+|+||.||+|.. .++..||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45678899999999999999985 2357899999975432 1235789999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCC----------------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcc
Q 010529 142 LLVAEYMPNDTLAKHLFHWEK----------------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYR 199 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~N 199 (508)
++||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~N 180 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARN 180 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-Ccccccchhe
Confidence 999999999999999975322 34899999999999999999999999 9999999999
Q ss_pred eeeCCCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhh
Q 010529 200 VLFDEDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDM 272 (508)
Q Consensus 200 ill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~ 272 (508)
||++.++.+||+|||++....... ...+++.|+|||++.+..++.++||||||+++|+|+| |..|+.....
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-- 258 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-- 258 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 999999999999999997654432 2345678999999998889999999999999999999 8877643221
Q ss_pred hhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 273 IRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
......+........+...+..+.+|+.+||..||.+|||+.+++++|+.+..
T Consensus 259 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ---ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp ---GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11122222222233445567889999999999999999999999999998864
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=353.33 Aligned_cols=257 Identities=14% Similarity=0.142 Sum_probs=207.3
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCC--cceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD--ERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~~lv~ 145 (508)
..|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45888999999999999999965 58999999997543 234567899999999999999999999987655 679999
Q ss_pred ecCCCCCHHHHhhccCC-CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee----CCCCCeEEcccCCccccC
Q 010529 146 EYMPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF----DEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~Dfg~a~~~~ 220 (508)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 99999999999974322 23999999999999999999999999 9999999999999 778889999999998665
Q ss_pred CCC---ccccCCCCCCccccc--------cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc------
Q 010529 221 DGK---SYSTNLAYTPPEYLK--------NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD------ 283 (508)
Q Consensus 221 ~~~---~~~~t~~y~aPE~~~--------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~------ 283 (508)
... ...||+.|+|||++. +..++.++|||||||++|||+||+.||............+..++.
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 442 346899999999986 467899999999999999999999876421110000000000000
Q ss_pred -----------------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 284 -----------------SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 284 -----------------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
-..........+..+.+|+.+||..||++|||+.+++++.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00112345678889999999999999999999999999988754
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=351.24 Aligned_cols=255 Identities=16% Similarity=0.269 Sum_probs=201.1
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++.+|++.+.||+|+||.||+|++. ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 4567889999999999999999975 567999998643 24567999999999999999999999986 458999999
Q ss_pred CCCCCHHHHhhccCC-CCcChHHHHHHHHHHHHHHHHHHh---CCCceeecCCCcceeeCCCCC-eEEcccCCccccCCC
Q 010529 148 MPNDTLAKHLFHWEK-QTIEWPLRLRVAFYIAEALDYCNT---EGRPLYHDLNAYRVLFDEDGD-PRLSCFGLMKNSMDG 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lH~---~~~iiH~Dikp~Nill~~~~~-~kl~Dfg~a~~~~~~ 222 (508)
++|++|.+++..... ..+++..++.++.||+.||.|||+ ++ |+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999974322 247889999999999999999999 78 999999999999998887 799999998755433
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....||+.|+|||++.+..++.++||||||+++|+|+||+.|+......... .............+...+..+.+|
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---HHHHHHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---HHHHHhcCCCCCcccccCHHHHHH
Confidence 3456899999999999889999999999999999999999886532111000 000111111222334456779999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
+.+||..||.+|||+.++++.|+.+.....
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999876543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=345.88 Aligned_cols=253 Identities=20% Similarity=0.364 Sum_probs=205.7
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCCh-------hHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDP-------TQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
.++|.+.+.||+|+||.||+|+. .+++.||||++........ +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35688899999999999999995 5689999999975543321 57899999999999999999999986544
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCC-ceeecCCCcceeeCCCCC-----eEEcccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGR-PLYHDLNAYRVLFDEDGD-----PRLSCFG 214 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~-iiH~Dikp~Nill~~~~~-----~kl~Dfg 214 (508)
++||||+++++|.+++.. ....+++..++.++.|++.||.|||+.+. ++||||||+|||++.++. +||+|||
T Consensus 97 -~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred -eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 799999999999998864 45579999999999999999999999863 999999999999987776 9999999
Q ss_pred CccccCCC-CccccCCCCCCccccc--cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 215 LMKNSMDG-KSYSTNLAYTPPEYLK--NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 215 ~a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
++...... ....||+.|+|||++. ...++.++||||||+++|+|++|+.||........ ...............+
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~ 252 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREEGLRPTIP 252 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHHHHSCCCCCCC
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHHhccCCCCCCC
Confidence 99855443 3456899999999984 45678899999999999999999988653211100 0011222223333445
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
...++.+.+|+.+||..||.+|||+.++++.|+.+
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 56678899999999999999999999999999764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=346.46 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=211.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.++|.+++.||+|+||.||+|...+++.||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3467889999999999999999988888899999976542 457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----- 222 (508)
+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 85 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999964 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....+++.|+|||++.+..++.++||||||+++|+|++ |+.|+........ ... +........+...+..+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----~~~-i~~~~~~~~~~~~~~~l~~l 237 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VED-ISTGFRLYKPRLASTHVYQI 237 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHH-HHTTCCCCCCTTSCHHHHHH
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH----HHH-HhcCCcCCCCccCcHHHHHH
Confidence 23345678999999988889999999999999999999 7766543211110 111 11111222334456789999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+||..||.+|||+.+++++|+.+..
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 238 MNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999865
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=366.53 Aligned_cols=257 Identities=18% Similarity=0.254 Sum_probs=208.1
Q ss_pred cCCCcccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG 138 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 138 (508)
-..++|.+++.||+|+||.||+|++ .+++.||||++...... ..+.+.+|+.++.++ +||||++++++|.+.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 3456788999999999999999984 23578999999754322 235699999999999 899999999999875
Q ss_pred Cc-ceeeeecCCCCCHHHHhhccCC-------------------------------------------------------
Q 010529 139 DE-RLLVAEYMPNDTLAKHLFHWEK------------------------------------------------------- 162 (508)
Q Consensus 139 ~~-~~lv~E~~~~~sL~~~l~~~~~------------------------------------------------------- 162 (508)
+. .++||||++||+|.+++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 54 8999999999999999975322
Q ss_pred ---------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------Ccccc
Q 010529 163 ---------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------KSYST 227 (508)
Q Consensus 163 ---------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------~~~~~ 227 (508)
..+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....+
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 12899999999999999999999999 999999999999999999999999999865432 23456
Q ss_pred CCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 228 NLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 228 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
|+.|+|||++.+..++.++||||||+++|+|+| |..|+...... ......+........+...++++.+++.+||
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 333 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 333 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence 788999999998899999999999999999999 88776542111 1111122222223334456678999999999
Q ss_pred ccCCCCCCChHHHHHHHHHhhc
Q 010529 307 QYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 307 ~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..||.+|||+.+++++|+.+..
T Consensus 334 ~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 334 HGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCChhhCCCHHHHHHHHHHHHH
Confidence 9999999999999999998864
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=378.69 Aligned_cols=318 Identities=19% Similarity=0.173 Sum_probs=234.9
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.|.+++.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 5788999999999999999964 68999999996543 2345679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCCC
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
|+.|++|.+++. ....+++..+..|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999886 4567999999999999999999999999 9999999999999 567899999999998665543
Q ss_pred ---ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCCHHHHHHH
Q 010529 224 ---SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEEATQV 298 (508)
Q Consensus 224 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 298 (508)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||........ ...+....... +.....++.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~ 258 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----LKKVEKGKYTFELPQWKKVSESA 258 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCSGGGGGSCHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCCcccccCCHHH
Confidence 3468999999999865 689999999999999999999988754321110 11111111111 1123456789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhhcCC-----CCCc--cchhccccccccCCCCCCCCCcchh-hccccchHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQTKS-----DVPS--NVMLRVSKHEEAQSTPQRPLSPLAE-ACSRMDLTAIH 370 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~-~~s~~d~~~l~ 370 (508)
.+|+.+||..||.+|||+.++++|-+-..... ..|. .....+.+........+.....+.. .....+...+.
T Consensus 259 ~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~ 338 (484)
T 3nyv_A 259 KDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELT 338 (484)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHH
Confidence 99999999999999999999999855432211 1110 0000000000000000000000111 11334556677
Q ss_pred HHHHHhhcCCCcccccchhhhhhHHHHHH
Q 010529 371 QILVMAHYRDDKETHELSFQEWTQQMRDM 399 (508)
Q Consensus 371 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 399 (508)
+.|..+ |.++++.++.+|+...+...
T Consensus 339 ~~F~~~---D~d~dG~I~~~El~~~l~~~ 364 (484)
T 3nyv_A 339 AIFHKM---DKNGDGQLDRAELIEGYKEL 364 (484)
T ss_dssp HHHHHH---CTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHh---CcCCCceEeHHHHHHHHHHH
Confidence 777777 89999999999997766443
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=377.35 Aligned_cols=318 Identities=18% Similarity=0.178 Sum_probs=235.8
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCC--CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKV--AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|++++.||+|+||+||+|+.. +++.||||++... .......+.+|+.++++++||||+++++++.+....++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 5788999999999999999964 6899999998642 223467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC---CCCCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD---EDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|.|++|.+.+.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998864 457999999999999999999999999 99999999999995 5567999999999865543
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCCHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEEATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||........ ...+....... +.....++.+.
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~ 254 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI----LKRVETGKYAFDLPQWRTISDDAK 254 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCSCSGGGGGSCHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCCcccCCCCHHHH
Confidence 34568999999999975 589999999999999999999988754321111 11111111111 11234567899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHhhcCCCCCcc-ch-------hccccccccCCCCCCCCCcchh-hccccchHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN-VM-------LRVSKHEEAQSTPQRPLSPLAE-ACSRMDLTAIH 370 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~p~~~-~~s~~d~~~l~ 370 (508)
+|+.+||..||.+|||+.++++|-+-.......+.. .. ..+.+........+..+..+.. ..+..+...+.
T Consensus 255 ~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~ 334 (486)
T 3mwu_A 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLT 334 (486)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 999999999999999999999995544332222211 00 0011111100000000001111 12445567777
Q ss_pred HHHHHhhcCCCcccccchhhhhhHHHHHH
Q 010529 371 QILVMAHYRDDKETHELSFQEWTQQMRDM 399 (508)
Q Consensus 371 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 399 (508)
++|..+ |.++++.++.+|+...+...
T Consensus 335 ~~F~~~---D~d~dG~I~~~El~~~l~~~ 360 (486)
T 3mwu_A 335 EIFRKL---DTNNDGMLDRDELVRGYHEF 360 (486)
T ss_dssp HHHHHH---CTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHh---CCCCCceeeHHHHHHHHHHh
Confidence 888877 99999999999998777543
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=377.10 Aligned_cols=317 Identities=18% Similarity=0.191 Sum_probs=229.0
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|++++.||+|+||.||+|+.. ++..||||++.... ......+.+|+.+++.++||||++++++|.+....++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 5788999999999999999964 68899999997643 23356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~~~~-- 222 (508)
|+||+|.+++.. ...+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998863 456999999999999999999999999 999999999999975 455999999999765543
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC--CCCCHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE--GKFSSEEATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 299 (508)
....||+.|+|||++. +.++.++|||||||++|+|++|..||........ ...+...... .......+..+.
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~ 269 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI----LRKVEKGKYTFDSPEWKNVSEGAK 269 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCSGGGTTSCHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCchhcccCCHHHH
Confidence 3456899999999986 5689999999999999999999988754321111 1111111111 011123467799
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHH--HhhcC----CCCC--ccchhccccccccCCCCCCCCCcchhh-ccccchHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLA--RLQTK----SDVP--SNVMLRVSKHEEAQSTPQRPLSPLAEA-CSRMDLTAIH 370 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~--~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~-~s~~d~~~l~ 370 (508)
+|+.+||..||.+|||+.++++|-+ ..... ...| ......+..........+......... ....+...+.
T Consensus 270 ~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~l~ 349 (494)
T 3lij_A 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELT 349 (494)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 9999999999999999999998833 32111 1111 111111111111111000000001111 1445566777
Q ss_pred HHHHHhhcCCCcccccchhhhhhHHHHH
Q 010529 371 QILVMAHYRDDKETHELSFQEWTQQMRD 398 (508)
Q Consensus 371 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 398 (508)
+.|..+ |.++++.++.+|+...+..
T Consensus 350 ~~F~~~---D~d~dG~I~~~El~~~l~~ 374 (494)
T 3lij_A 350 DIFRHI---DKNGDGQLDRQELIDGYSK 374 (494)
T ss_dssp HHHHHH---CTTCSSEECHHHHHHTTHH
T ss_pred HHHHHh---CcCCCCeEcHHHHHHHHHH
Confidence 888877 8899999999998776643
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=356.25 Aligned_cols=245 Identities=16% Similarity=0.207 Sum_probs=196.0
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCC--------
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD-------- 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-------- 139 (508)
.+|++++.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.++++++||||++++++|.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45788999999999999999965 7899999999754432 3567999999999999999999999986543
Q ss_pred -------------------------------------------------cceeeeecCCCCCHHHHhhccCC-CCcChHH
Q 010529 140 -------------------------------------------------ERLLVAEYMPNDTLAKHLFHWEK-QTIEWPL 169 (508)
Q Consensus 140 -------------------------------------------------~~~lv~E~~~~~sL~~~l~~~~~-~~l~~~~ 169 (508)
..++|||||+|++|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 27999999999999999975322 3456667
Q ss_pred HHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----------------CccccCCCCCC
Q 010529 170 RLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----------------KSYSTNLAYTP 233 (508)
Q Consensus 170 ~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----------------~~~~~t~~y~a 233 (508)
++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 8999999999999999999 999999999999999999999999998765443 23468999999
Q ss_pred ccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010529 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRER 313 (508)
Q Consensus 234 PE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R 313 (508)
||++.+..++.++||||||+++|+|++|..|+..... .................++.+.+|+.+||+.||.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------IITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------HHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------HHHHhhccCCCcccccCChhHHHHHHHHccCCCCcC
Confidence 9999988999999999999999999999754321110 000011111111123455778999999999999999
Q ss_pred CChHHHHHH
Q 010529 314 PSTKNLVVT 322 (508)
Q Consensus 314 ps~~~il~~ 322 (508)
||+.+++++
T Consensus 318 ps~~~~l~~ 326 (332)
T 3qd2_B 318 PEATDIIEN 326 (332)
T ss_dssp CCHHHHHHS
T ss_pred CCHHHHhhc
Confidence 999999976
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=358.85 Aligned_cols=252 Identities=17% Similarity=0.260 Sum_probs=202.4
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCE----EEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQW----IAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+|++++.||+|+||.||+|++. +++. ||+|.+.... ....+.|.+|+.++++++||||++++++|... ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 45788999999999999999953 4443 5888875433 23456899999999999999999999999765 4789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
|+||+.+|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 94 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999965 4567999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 ------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
...+|+.|+|||++.+..++.++||||||+++|||+| |+.|+.... .......+........+...+.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 246 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTI 246 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHHcCCCCCCCccCCH
Confidence 2245678999999999999999999999999999999 887764321 1122223333333334555677
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 899999999999999999999999999998653
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=377.71 Aligned_cols=317 Identities=15% Similarity=0.155 Sum_probs=233.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-------------CChhHHHHHHHHhccCCCCCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-------------PDPTQFKEEAEGVGKLRRKRLANLIGYC 135 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nIv~~~~~~ 135 (508)
..|.+++.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 5688999999999999999995 4588999999975432 2246789999999999999999999999
Q ss_pred eeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC---CeEEcc
Q 010529 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG---DPRLSC 212 (508)
Q Consensus 136 ~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~D 212 (508)
.+....++|||||+|++|.+++.. ...+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998864 456999999999999999999999999 99999999999998776 699999
Q ss_pred cCCccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC
Q 010529 213 FGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289 (508)
Q Consensus 213 fg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||........ ...+..... .
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~--~ 265 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI----IKKVEKGKY--Y 265 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--C
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCC--C
Confidence 9999866543 3457899999999986 5689999999999999999999988754321111 111111111 1
Q ss_pred CC----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCCCcc-------chhccccccccCCCCCCCCCcch
Q 010529 290 FS----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN-------VMLRVSKHEEAQSTPQRPLSPLA 358 (508)
Q Consensus 290 ~~----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~~ 358 (508)
++ ...++++.+|+.+||..||.+|||+.++++|-+-.......... .+..+..........+.....+.
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~ 345 (504)
T 3q5i_A 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIG 345 (504)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHH
T ss_pred CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11 12467899999999999999999999999986544322222110 01111111111000000000011
Q ss_pred h-hccccchHHHHHHHHHhhcCCCcccccchhhhhhHHHHHH
Q 010529 359 E-ACSRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDM 399 (508)
Q Consensus 359 ~-~~s~~d~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 399 (508)
. ..+..+...+.+.|..+ |.++++.++.+|+...+...
T Consensus 346 ~~~~~~~~~~~l~~~F~~~---D~d~dG~I~~~El~~~l~~~ 384 (504)
T 3q5i_A 346 SKLTTLEERKELTDIFKKL---DKNGDGQLDKKELIEGYNVL 384 (504)
T ss_dssp HHTSCHHHHHHHHHHHHHH---CTTCSSEECHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHHHHee---CCCCCCeEcHHHHHHHHHHh
Confidence 1 12445667788888888 99999999999988776443
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=369.60 Aligned_cols=255 Identities=20% Similarity=0.179 Sum_probs=208.8
Q ss_pred HHHHhcCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeee
Q 010529 62 LRAATNNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA 137 (508)
Q Consensus 62 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~ 137 (508)
+........+|.+++.||+|+||.||+|+.. +++.||||++... .......+.+|+.+++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3344456678999999999999999999964 5889999998642 12234568999999999999999999999999
Q ss_pred CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
....|||||||+||+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999853 46899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC-----CccccCCCCCCccccccCC----cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--c
Q 010529 218 NSMDG-----KSYSTNLAYTPPEYLKNGR----VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--L 286 (508)
Q Consensus 218 ~~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~ 286 (508)
..... ....||+.|+|||++.+.. ++.++|||||||++|||+||+.||........ ...++... .
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~ 292 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMNHKNSL 292 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTHHHHC
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH----HHHHHhccccc
Confidence 65543 2567999999999997654 78999999999999999999988764321111 11111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCC--CCChHHHHHHHH
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRE--RPSTKNLVVTLA 324 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~~il~~L~ 324 (508)
..+.....+.++.+|+.+||..+|.+ ||++.+|++|-+
T Consensus 293 ~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 293 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 11111235678999999999999988 999999999854
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-45 Score=369.13 Aligned_cols=247 Identities=15% Similarity=0.153 Sum_probs=203.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+.|++++.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 3578899999999999999995 56889999999764422 23568999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC---CCCCeEEcccCCccccCCC-
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD---EDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~- 222 (508)
||.||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999999998874 457999999999999999999999999 99999999999998 5688999999999766543
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSEEATQ 297 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 297 (508)
....||+.|+|||++.+..++.++|||||||++|+|++|..||........ ...+..... ........++.
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~ 243 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL----YQQIKAGAYDFPSPEWDTVTPE 243 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTCCCCCTTTTTTSCHH
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHhCCCCCCccccccCCHH
Confidence 235789999999999988999999999999999999999988754321111 111111111 11112345678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+|+.+||..||.+|||+.++++|-
T Consensus 244 ~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 99999999999999999999999983
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=360.44 Aligned_cols=257 Identities=20% Similarity=0.271 Sum_probs=208.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCC-CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCC
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGD 139 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 139 (508)
....|.+.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 345678899999999999999995 235679999997543 23356899999999999 9999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccCC---------------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEK---------------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~ 198 (508)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~ 201 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAAR 201 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGG
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChh
Confidence 99999999999999999975322 24899999999999999999999999 999999999
Q ss_pred ceeeCCCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhh
Q 010529 199 RVLFDEDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALD 271 (508)
Q Consensus 199 Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~ 271 (508)
|||++.++.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..|+.....
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~- 280 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV- 280 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-
Confidence 9999999999999999997554332 2345778999999988899999999999999999998 8877643211
Q ss_pred hhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 272 MIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.......+........+...+..+.+|+.+||..||.+|||+.+++++|+.+...
T Consensus 281 ---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 281 ---DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp ---SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ---HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111222222233334445678899999999999999999999999999998654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-45 Score=349.49 Aligned_cols=251 Identities=19% Similarity=0.230 Sum_probs=199.7
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|.+++.||+|+||.||+|+..+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999998899999999965432 2246789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
+.+ +|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 974 89998864 3467999999999999999999999999 999999999999999999999999998754422 3
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-----------chhhh-----hcccc
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-----------NLNLL-----MDSHL 286 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-----------~~~~~-----~~~~~ 286 (508)
...+|+.|+|||++.+ ..++.++||||||+++|+|+||+.||........... ..... .+...
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 3467999999999876 4589999999999999999999988754321100000 00000 00000
Q ss_pred -------CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 287 -------EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 287 -------~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
........+..+.+|+.+||..||.+|||+.++++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 282 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 0011123467789999999999999999999999763
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=359.69 Aligned_cols=247 Identities=15% Similarity=0.132 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..++|.+++.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3467899999999999999999964 68999999986432 2345678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999974 356999999999999999999999999 999999999999999999999999999865543
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
....||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+.... ..++...+..+.+|+
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~i~~~~--~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ----IYEKIVSGK--VRFPSHFSSDLKDLL 269 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCC--CCCCTTCCHHHHHHH
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH----HHHHHHcCC--CCCCCCCCHHHHHHH
Confidence 35678999999999998899999999999999999999998875432111 111111111 123445677899999
Q ss_pred HHhcccCCCCCCC-----hHHHHHHH
Q 010529 303 SQCLQYEPRERPS-----TKNLVVTL 323 (508)
Q Consensus 303 ~~cl~~~p~~Rps-----~~~il~~L 323 (508)
.+||..||.+||+ +.+|++|-
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHHhhcCHHhccCCccCCHHHHHhCc
Confidence 9999999999998 88988874
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-45 Score=359.63 Aligned_cols=248 Identities=17% Similarity=0.194 Sum_probs=204.6
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 578899999999999999995 45899999999765432 235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC---CCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED---GDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~Dfg~a~~~~~~-- 222 (508)
++|++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 99999999886 4457999999999999999999999999 9999999999999765 45999999999866543
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC--CCCCHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE--GKFSSEEATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+..++.++|||||||++|+|++|..||........ ...+...... .......+.++.
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~ 262 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL----YAQIKAGAYDYPSPEWDTVTPEAK 262 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCTTGGGGSCHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHH
Confidence 245789999999999988899999999999999999999988754321111 0111111111 111124567899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+|+.+||..||.+|||+.+++++-+-
T Consensus 263 ~li~~~L~~dP~~R~t~~e~l~hp~~ 288 (362)
T 2bdw_A 263 SLIDSMLTVNPKKRITADQALKVPWI 288 (362)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTSHHH
T ss_pred HHHHHHcCCChhhCcCHHHHhcCccc
Confidence 99999999999999999999988553
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=350.10 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=214.4
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
...+|.+.+.||+|+||.||+|.... +..||||++.... ...+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 44567889999999999999999654 8889999997543 345689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
|++|++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence 999999999998666677999999999999999999999999 9999999999999999999999999998665432
Q ss_pred --ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 224 --SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.... .......+........+...++.+.+
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVYE 243 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 2345778999999998899999999999999999999 776654321 11122222222333345556788999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
|+.+||..||.+|||+.++++.|+.+...
T Consensus 244 li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 244 LMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999887643
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=364.82 Aligned_cols=250 Identities=16% Similarity=0.148 Sum_probs=206.8
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++.|.+++.||+|+||.||+|.. .+++.||+|++......+...+.+|+.+++.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 35688999999999999999995 46889999999765433456799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC--CCCCeEEcccCCccccCCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD--EDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
+.|++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||++.......
T Consensus 130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999999999863 3457999999999999999999999999 99999999999997 45789999999998765442
Q ss_pred -ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc--ccCCCCCHHHHHHHHH
Q 010529 224 -SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS--HLEGKFSSEEATQVVG 300 (508)
Q Consensus 224 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 300 (508)
...||+.|+|||++.+..++.++|||||||++|+|+||..||........ ...+... ..........+.++.+
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET----LQNVKRCDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCccccccCCHHHHH
Confidence 34689999999999988899999999999999999999988754321100 1111111 0111222345678999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
|+.+||..||.+|||+.+++++-+
T Consensus 284 li~~~L~~dP~~Rpt~~ell~hp~ 307 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVHDALEHPW 307 (387)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHcCCChhHCcCHHHHhhCcc
Confidence 999999999999999999998743
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=359.45 Aligned_cols=249 Identities=20% Similarity=0.201 Sum_probs=206.1
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|.+++.||+|+||.||+|+. .+++.||||++....... .+.+.+|+.+++.++||||+++++++...+..+|||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 67888999999999999995 678999999997554322 24688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 227 (508)
+. |+|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..........|
T Consensus 136 ~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 136 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp CS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 97 678887753 3467999999999999999999999999 99999999999999999999999999988777777889
Q ss_pred CCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 228 t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
|+.|+|||++. ++.++.++|||||||++|||+||+.|+....... ....+.........+...+..+.+|+.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 99999999984 5678999999999999999999998765421110 0111111111111223446778999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhh
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
||..||.+|||+.+++++.+-..
T Consensus 289 ~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp HTCSSGGGSCCHHHHTTCHHHHS
T ss_pred HcccChhhCcCHHHHhhChhhhc
Confidence 99999999999999999877654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-45 Score=348.59 Aligned_cols=252 Identities=18% Similarity=0.242 Sum_probs=196.7
Q ss_pred CCcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
...|++.+.||+|+||.||+|.... +..||||++...... ..+.+.+|+.+++.++||||+++++++ .++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 3568889999999999999999643 456999998754322 245789999999999999999999998 4567899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 93 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 93 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999964 3457999999999999999999999999 9999999999999999999999999997654432
Q ss_pred -----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 224 -----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...+++.|+|||++.+..++.++||||||+++|+|++ |..|+..... ......+........+...+..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~ 245 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMPPNCPPT 245 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHH
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHHHHHHHcCCCCCCCCCCCHH
Confidence 2345678999999988889999999999999999997 7766543211 1111111111122344556788
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-45 Score=346.58 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=209.2
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+.|++++.||+|+||.||+|...++..||||++.... ...+.+.+|+++++.++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 35688899999999999999998888889999997543 34678999999999999999999999986 45689999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-----
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK----- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~----- 223 (508)
++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 9999999996433346999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...+++.|+|||++.+..++.++||||||+++|+|++ |+.|+....... ....+........+...+..+.+|+
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 243 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPDNCPEELYQLM 243 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----HHHHHhcccCCCCcccccHHHHHHH
Confidence 2345778999999988889999999999999999999 776654321111 1111111122233445567899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+||..||.+|||+.++++.|+.+...
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999988653
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=355.42 Aligned_cols=258 Identities=19% Similarity=0.250 Sum_probs=194.4
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-CC---EEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc-
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-RQ---WIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER- 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~- 141 (508)
..+|.+++.||+|+||.||+|+... +. .||||++..... ...+.+.+|+.+++.++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4568889999999999999999544 32 799999976532 2346799999999999999999999999876654
Q ss_pred -----eeeeecCCCCCHHHHhhccC----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcc
Q 010529 142 -----LLVAEYMPNDTLAKHLFHWE----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212 (508)
Q Consensus 142 -----~lv~E~~~~~sL~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 212 (508)
++||||+.+++|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECC
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEee
Confidence 99999999999999986422 225899999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccc
Q 010529 213 FGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSH 285 (508)
Q Consensus 213 fg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 285 (508)
||++....... ...+++.|+|||.+.+..++.++||||||+++|+|+| |..|+..... ......+...
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~ 255 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYNYLIGG 255 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTT
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHHHHHHhcC
Confidence 99997654332 2345678999999998899999999999999999999 7766543211 1111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
.....+...+..+.+|+.+||..||.+|||+.++++.|+.+......
T Consensus 256 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 256 NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 12233445667899999999999999999999999999998765443
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=358.42 Aligned_cols=245 Identities=21% Similarity=0.233 Sum_probs=189.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.|.+.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 4788899999999999999965 58889999997543 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccccCCC---C
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNSMDG---K 223 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~~~~---~ 223 (508)
|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++...... .
T Consensus 132 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 999999996 4556999999999999999999999999 999999999999975 889999999998865443 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l 301 (508)
...||+.|+|||++.+..++.++|||||||++|+|++|..|+........ ....+..... ........+..+.+|
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~l 285 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---MFRRILNCEYYFISPWWDEVSLNAKDL 285 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---HHHHHHTTCCCCCTTTTTTSCHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---HHHHHHhCCCccCCchhhhCCHHHHHH
Confidence 45689999999999988899999999999999999999988754321110 0111111111 111223456789999
Q ss_pred HHHhcccCCCCCCChHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+||..||.+|||+.+++++-
T Consensus 286 i~~~L~~dP~~Rpt~~e~l~hp 307 (349)
T 2w4o_A 286 VRKLIVLDPKKRLTTFQALQHP 307 (349)
T ss_dssp HHTTSCSSGGGSCCHHHHHHST
T ss_pred HHHHccCChhhCcCHHHHhcCc
Confidence 9999999999999999999863
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=346.69 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=202.3
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC-Ccceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-DERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-~~~~lv~E 146 (508)
++++|++++.||+|+||.||+|... ++.||||++.... ..+.+.+|+.+++.++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 4567899999999999999999874 7789999997543 457899999999999999999999997654 47899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Ccc
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSY 225 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 225 (508)
|+++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 999999999997543344899999999999999999999999 999999999999999999999999998755443 334
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
.+++.|+|||++.+..++.++||||||+++|+|+| |..|+..... ......+........+...++.+.+++.+
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 249 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPPAVYEVMKN 249 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCCTTCCHHHHHHHHH
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCcccCCHHHHHHHHH
Confidence 56889999999988889999999999999999998 8876543211 11111112222233445567789999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhhc
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
||+.||.+|||+.++++.|+.+..
T Consensus 250 ~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 250 CWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCChhhCCCHHHHHHHHHHHHh
Confidence 999999999999999999999865
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=362.27 Aligned_cols=244 Identities=21% Similarity=0.239 Sum_probs=193.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC---CChhHHHHHHHH-hccCCCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW---PDPTQFKEEAEG-VGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..++|++++.||+|+||.||+|+.. +++.||||++..... .....+..|..+ ++.++||||+++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467899999999999999999964 588999999975432 223456777776 56789999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
|||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 116 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999963 456899999999999999999999999 99999999999999999999999999975322
Q ss_pred ---CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 222 ---GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 222 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........ ...++... ..++...+..+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~ 266 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNKP--LQLKPNITNSA 266 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH----HHHHHHSC--CCCCSSSCHHH
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHhcc--cCCCCCCCHHH
Confidence 2456799999999999998999999999999999999999988754321111 11111111 12334456789
Q ss_pred HHHHHHhcccCCCCCCChHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLV 320 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il 320 (508)
.+|+.+||..||.+||++.+.+
T Consensus 267 ~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 267 RHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp HHHHHHHTCSSGGGSTTTTTTH
T ss_pred HHHHHHHcccCHHhCCCCCCCH
Confidence 9999999999999999985433
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=360.19 Aligned_cols=246 Identities=17% Similarity=0.245 Sum_probs=205.3
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
..++|.+++.||+|+||.||+|+.. +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4678899999999999999999964 58899999997532 23456788999999887 9999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
+||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999963 356999999999999999999999999 99999999999999999999999999985432
Q ss_pred ---CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 222 ---GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 222 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........ ...+... ...++...+.++
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~ 245 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----FHSIRMD--NPFYPRWLEKEA 245 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH----HHHHHhC--CCCCCcccCHHH
Confidence 2355789999999999998999999999999999999999988754321111 1111111 122344466789
Q ss_pred HHHHHHhcccCCCCCCChH-HHHHH
Q 010529 299 VGLASQCLQYEPRERPSTK-NLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~-~il~~ 322 (508)
.+|+.+||..||.+||++. ++++|
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHhcCCHhHcCCChHHHHcC
Confidence 9999999999999999997 77665
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=353.89 Aligned_cols=256 Identities=18% Similarity=0.293 Sum_probs=210.6
Q ss_pred CCcccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 140 (508)
.++|.+.+.||+|+||.||+|++ .+++.||||++...... ..+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35688899999999999999985 34678999999755421 246799999999999 99999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCC----------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEK----------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
.++||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+|||++.
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTH 180 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEET
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcC
Confidence 9999999999999999975332 24899999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccc
Q 010529 205 DGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGEN 277 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~ 277 (508)
++.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..|+...... ..
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~ 256 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SK 256 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----HH
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----hH
Confidence 9999999999998665432 2345678999999988899999999999999999999 87665432111 11
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
....+........+...+..+.+|+.+||..||.+|||+.+++++|+.+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1122222222333445667899999999999999999999999999988654
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-45 Score=353.71 Aligned_cols=242 Identities=17% Similarity=0.168 Sum_probs=194.6
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.|++++.||+|+||+||+|+.. +++.||||++....... ...+..|+..+..+ +||||++++++|.+++..+||||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 5788899999999999999965 69999999986543322 23455666666555 99999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---C
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---K 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---~ 223 (508)
|+ +++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 6799998865 3457999999999999999999999999 999999999999999999999999998765443 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|+|||++.+ .++.++||||||+++|||++|..+|..... ...+.........+...+..+.+|+.
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~ 286 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------WQQLRQGYLPPEFTAGLSSELRSVLV 286 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------HHHHTTTCCCHHHHTTSCHHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHhccCCCcccccCCCHHHHHHHH
Confidence 3468999999999875 789999999999999999999876654311 11111111111112234577999999
Q ss_pred HhcccCCCCCCChHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L 323 (508)
+||..||.+|||+.+++++-
T Consensus 287 ~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 287 MMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp HHSCSSTTTSCCHHHHHTSG
T ss_pred HHcCCChhhCcCHHHHHhCc
Confidence 99999999999999999763
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-45 Score=357.14 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=202.4
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCC--CCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRR--KRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h--~nIv~~~~~~~~~~~~~lv~ 145 (508)
..|.+++.||+|+||.||++...+++.||||++....... .+.+.+|+.++..++| |||+++++++..+...+|||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4688999999999999999998889999999997554322 3578999999999976 99999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|+ .+++|.+++.. ...+++..+..|+.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||++......
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57899999974 457999999999999999999999999 99999999999997 678999999999865433
Q ss_pred ---CccccCCCCCCcccccc-----------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC
Q 010529 223 ---KSYSTNLAYTPPEYLKN-----------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (508)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... ......++.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcCCccc
Confidence 24568999999999864 678889999999999999999998875421110 1122233333333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.++...+..+.+|+.+||..||.+|||+.++++|.+-..
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 344444567999999999999999999999999976543
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=360.32 Aligned_cols=259 Identities=14% Similarity=0.130 Sum_probs=203.1
Q ss_pred CCcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCC-----------ChhHHHHHHHHhccCCCCCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWP-----------DPTQFKEEAEGVGKLRRKRLANL 131 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nIv~~ 131 (508)
-..|.+++.||+|+||.||+|.+.. ++.||||++...... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578999999999999999999654 477999998654311 01234455666777889999999
Q ss_pred eeeeeeC----CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC--CC
Q 010529 132 IGYCCAG----DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD--ED 205 (508)
Q Consensus 132 ~~~~~~~----~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~--~~ 205 (508)
++++... ...+|||||+ |++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++ .+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCT
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCC
Confidence 9998765 4579999999 9999999965 4467999999999999999999999999 99999999999998 88
Q ss_pred CCeEEcccCCccccCCC-----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh
Q 010529 206 GDPRLSCFGLMKNSMDG-----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~ 274 (508)
+.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~ 270 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY 270 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence 99999999999754322 2334899999999999888999999999999999999999887643211100
Q ss_pred --------ccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCCC
Q 010529 275 --------GENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333 (508)
Q Consensus 275 --------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~ 333 (508)
...+..+++..+. ....+.++.+|+..||..||.+|||+.+|++.|+.+.......
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 271 VRDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 0111222222111 1223567999999999999999999999999999987654443
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=348.20 Aligned_cols=257 Identities=14% Similarity=0.125 Sum_probs=208.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+|+.++..+ +|+||+++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 4688999999999999999995 678999999986543 345789999999999 899999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC-----eEEcccCCccccCCC
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD-----PRLSCFGLMKNSMDG 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~-----~kl~Dfg~a~~~~~~ 222 (508)
+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 9999999964 3456999999999999999999999999 999999999999987766 999999998754432
Q ss_pred -----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC---
Q 010529 223 -----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--- 288 (508)
Q Consensus 223 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 288 (508)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ......+.......
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 243 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQSTPLR 243 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHHHSCHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHHHHHHhhccCccHH
Confidence 334689999999999988899999999999999999999988754210000 00000110000000
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
......++.+.+|+.+||..||.+|||+.+|++.|+.+......
T Consensus 244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 01123457899999999999999999999999999998765443
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=358.14 Aligned_cols=259 Identities=21% Similarity=0.264 Sum_probs=210.7
Q ss_pred CcccccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee--CCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~ 142 (508)
..|++++.||+|+||.||+|++ .++..||||++........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4678899999999999999984 3588899999976654445679999999999999999999999863 45689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 103 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999999999964 2346999999999999999999999999 999999999999999999999999999865433
Q ss_pred C-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc----------cchhhhhccc
Q 010529 223 K-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG----------ENLNLLMDSH 285 (508)
Q Consensus 223 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~----------~~~~~~~~~~ 285 (508)
. ...+|+.|+|||++.+..++.++||||||+++|+|++|..|+.......... ......+...
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 2 2346777999999998889999999999999999999998765443221110 1111222223
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.....+...++.+.+|+.+||..||.+|||+.+++++|+.+....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 333445566788999999999999999999999999999987543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=353.46 Aligned_cols=246 Identities=17% Similarity=0.242 Sum_probs=197.5
Q ss_pred CCcccccccCCCCcccEEEEEEE----cCCCEEEEEEecCCCC----CChhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL----ENRQWIAVKKFTKVAW----PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
.++|++++.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 45788999999999999999996 4689999999976431 234568899999999999999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.|+||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999963 456899999999999999999999999 9999999999999999999999999987543
Q ss_pred CC----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 221 DG----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 221 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
.. ....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ...+... ...++...+.
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~ 246 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT----IDKILKC--KLNLPPYLTQ 246 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHT--CCCCCTTSCH
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCH
Confidence 22 345689999999999988899999999999999999999988754321111 1111111 1123445567
Q ss_pred HHHHHHHHhcccCCCCCC-----ChHHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERP-----STKNLVVTL 323 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rp-----s~~~il~~L 323 (508)
.+.+|+.+||..||.+|| ++.++++|-
T Consensus 247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 899999999999999999 778888873
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=356.00 Aligned_cols=250 Identities=16% Similarity=0.244 Sum_probs=204.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
..++|.+++.||+|+||.||+|+.. +++.||||++....... ...+.+|..++.++ +||||+++++++.+.+..|
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 3467889999999999999999964 58899999997654333 34588999999988 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
+||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 87 lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999999963 357999999999999999999999999 99999999999999999999999999985332
Q ss_pred ---CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-hccc----hhhhhccccCCCCCHH
Q 010529 222 ---GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-RGEN----LNLLMDSHLEGKFSSE 293 (508)
Q Consensus 222 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~ 293 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .... ...+... ...++..
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~ 241 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRS 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTT
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCC
Confidence 2345789999999999988999999999999999999999988743110000 0000 1111111 1223445
Q ss_pred HHHHHHHHHHHhcccCCCCCCCh------HHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPST------KNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~------~~il~~ 322 (508)
.+..+.+|+.+||..||.+||++ .++++|
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 67789999999999999999996 677766
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=356.17 Aligned_cols=247 Identities=18% Similarity=0.182 Sum_probs=203.3
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC-----CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV-----AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.|++++.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 578899999999999999995 56899999998532 122457899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC---eEEcccCCcccc
Q 010529 145 AEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD---PRLSCFGLMKNS 219 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~Dfg~a~~~ 219 (508)
||||+|++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998887542 2345899999999999999999999999 999999999999976554 999999999766
Q ss_pred CCC----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----
Q 010529 220 MDG----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS---- 291 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 291 (508)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........ ..+..... ..+
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~i~~~~~--~~~~~~~ 256 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF-----EGIIKGKY--KMNPRQW 256 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHH-----HHHHHTCC--CCCHHHH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHH-----HHHHcCCC--CCCcccc
Confidence 543 235689999999999988899999999999999999999988765321111 11111111 111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
...+..+.+|+.+||..||.+|||+.++++|-+-
T Consensus 257 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~ 290 (351)
T 3c0i_A 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290 (351)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhh
Confidence 1235779999999999999999999999988543
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=358.35 Aligned_cols=255 Identities=18% Similarity=0.250 Sum_probs=196.5
Q ss_pred cccccccCCCCcccEEEEEEEc--C--CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeee-CCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE--N--RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCA-GDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~lv 144 (508)
.|.+.+.||+|+||.||+|++. + +..||||.+..... ...+.|.+|+.++++++||||++++++|.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566788999999999999953 2 23689999865432 224679999999999999999999998754 4578999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999964 4456899999999999999999999999 999999999999999999999999999754332
Q ss_pred ------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 223 ------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 223 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
....+|+.|+|||++.+..++.++||||||+++|||+||..||+.... .......+........+..++.
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~----~~~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC----SSCHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCH
Confidence 223456789999999989999999999999999999995545443211 1111111111112223445567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
.+.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999876543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=350.05 Aligned_cols=264 Identities=16% Similarity=0.193 Sum_probs=203.5
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..+.+|++++.||+|+||.||+|.. .+++.||||++....... ...+.+|+.+++.++||||+++++++...+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 3456789999999999999999995 568999999997643332 356899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 143 LVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
+||||+.+++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999998642 3556899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 221 DG----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 221 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
.. ....+++.|+|||++.+..++.++||||||+++|+|++|+.|+......... ....+.............+.
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--LCKKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH--HHHHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH--HHHHhhcccCCCCcccccCH
Confidence 33 2346889999999999888999999999999999999999887543211000 00011111111111234567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCCC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVP 333 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~ 333 (508)
.+.+|+.+||..||.+|||+.++++.|+.+......|
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 7999999999999999999999999999998755443
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=378.36 Aligned_cols=254 Identities=24% Similarity=0.313 Sum_probs=211.2
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
...|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 35678889999999999999999888889999997654 345789999999999999999999999865 6789999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
.+|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 422 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence 9999999996544456999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...++..|+|||++.+..++.++|||||||++|||+| |+.|+...... .+...+........+..++..+.+||
T Consensus 423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li 497 (535)
T 2h8h_A 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHDLM 497 (535)
T ss_dssp STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999988899999999999999999999 77665432111 11111122222233455677899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.+||..||++|||+.+|++.|+.+....
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999886543
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=357.70 Aligned_cols=246 Identities=19% Similarity=0.251 Sum_probs=205.5
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCC---CCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
..++|++++.||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4678899999999999999999965 4888999999753 223456788999999988 8999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
|||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999963 356999999999999999999999999 99999999999999999999999999985432
Q ss_pred ---CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 222 ---GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 222 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..++...+.++
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~s~~~ 248 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHN--VAYPKSMSKEA 248 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCC--CCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH----HHHHHhCC--CCCCCCCCHHH
Confidence 2355789999999999988999999999999999999999988754321111 11122111 12344567889
Q ss_pred HHHHHHhcccCCCCCCC-----hHHHHHH
Q 010529 299 VGLASQCLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps-----~~~il~~ 322 (508)
.+|+.+||..||.+||+ +.++++|
T Consensus 249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 249 VAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999995 5777766
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=345.89 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=194.8
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
-..|.+.+.||+|+||.||+|+..+ .||||+++...... .+.|.+|+.+++.++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3567889999999999999998644 49999997554322 35799999999999999999999976 5567899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 100 WCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred ecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999999999854 4567999999999999999999999999 999999999999999999999999998754321
Q ss_pred --CccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
....||+.|+|||++. +..++.++||||||+++|+|++|+.|+............................+++.
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHH
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHH
Confidence 2346899999999986 56788899999999999999999988754211100000000000000011123355678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+|+.+||..||.+|||+.++++.|+.+..
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999998754
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=367.63 Aligned_cols=252 Identities=17% Similarity=0.167 Sum_probs=206.1
Q ss_pred hcCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
....++|++++.||+|+||.||+|+.. +++.||||++... .......+.+|+.++..++||||++++++|.+.+..
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 344567899999999999999999965 4788999999642 112334589999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|||||||+||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 999999999999999964 3467999999999999999999999999 99999999999999999999999999976544
Q ss_pred C-----CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc---cCC
Q 010529 222 G-----KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH---LEG 288 (508)
Q Consensus 222 ~-----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 288 (508)
. ....||+.|+|||++. ...++.++|||||||++|||+||+.||........ ...++... ..+
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~p 303 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHKERFQFP 303 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTHHHHCCCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH----HHhhhhccccccCC
Confidence 3 2357899999999987 46789999999999999999999988765321111 11111110 111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCC--CCChHHHHHHH
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRE--RPSTKNLVVTL 323 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~~il~~L 323 (508)
......++++.+|+.+||..+|++ ||++.++++|-
T Consensus 304 ~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 304 TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 111235678999999999888888 99999999884
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=352.90 Aligned_cols=254 Identities=21% Similarity=0.250 Sum_probs=203.0
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
.+.|.+.+.||+|+||.||+|.... +..||||++...... ....+.+|+.+++.++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3457778899999999999999543 235999999754322 2346899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 123 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 123 IITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999964 4467999999999999999999999999 999999999999999999999999999765432
Q ss_pred C-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHH
Q 010529 223 K-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294 (508)
Q Consensus 223 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (508)
. ...+|+.|+|||++.+..++.++||||||+++|+|+| |+.|+...... .....+........+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~ 275 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKAINDGFRLPTPMDC 275 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTTC
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHCCCcCCCcccC
Confidence 1 1234667999999988889999999999999999999 88776432111 111111111222334456
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+..+.+++.+||..||.+|||+.++++.|+.+...
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 77899999999999999999999999999998753
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=350.88 Aligned_cols=257 Identities=23% Similarity=0.290 Sum_probs=207.1
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCE--EEEEEecCCC-CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQW--IAVKKFTKVA-WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
.+++|.+.+.||+|+||.||+|+. .++.. ||||.+.... ....+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 346788899999999999999995 45654 4999987533 23456799999999999 9999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCe
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~ 208 (508)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeE
Confidence 9999999999999996432 246999999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCC---CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhcc
Q 010529 209 RLSCFGLMKNSMD---GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDS 284 (508)
Q Consensus 209 kl~Dfg~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 284 (508)
||+|||++..... .....+++.|+|||++.+..++.++||||||+++|+|+| |+.|+....... ....+..
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~~~ 256 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQ 256 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHGGG
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----HHHHhhc
Confidence 9999999874332 233456788999999988889999999999999999998 887764432111 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
......+...+..+.+|+.+||..||.+|||+.+++++|+.+....
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 257 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 1222334456678999999999999999999999999999987654
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=350.37 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=188.5
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.++|++++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 35678899999999999999995 5689999999975432 234679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccC----CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 147 YMPNDTLAKHLFHWE----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
|+. ++|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 997 68999886431 245899999999999999999999999 999999999999999999999999999765432
Q ss_pred ----CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhhhc-------
Q 010529 223 ----KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLLMD------- 283 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~~~------- 283 (508)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||......... +......+.
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 34568999999999976 46899999999999999999999887643211100 000000000
Q ss_pred --ccc------------CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 284 --SHL------------EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 284 --~~~------------~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
... ........+..+.+|+.+||..||.+|||+.+++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp 295 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP 295 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCCh
Confidence 000 0001112356799999999999999999999999873
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=344.62 Aligned_cols=245 Identities=18% Similarity=0.253 Sum_probs=205.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee------------
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA------------ 137 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------------ 137 (508)
+|.+++.||+|+||.||+|... +++.||||++.... ..+.+|+++++.++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 4678899999999999999965 68999999997543 568899999999999999999998854
Q ss_pred ----CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEccc
Q 010529 138 ----GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCF 213 (508)
Q Consensus 138 ----~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Df 213 (508)
....++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcc
Confidence 345799999999999999997655567999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC
Q 010529 214 GLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290 (508)
Q Consensus 214 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
|++...... ....+|+.|+|||++.+..++.++||||||+++|+|++|..|+.... . ....+.. ...
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~-----~~~~~~~----~~~ 236 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-K-----FFTDLRD----GII 236 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-H-----HHHHHHT----TCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-H-----HHHHhhc----ccc
Confidence 998765543 34568999999999998889999999999999999999987653211 1 0111111 122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
+...+..+.+++.+||..||.+|||+.+++++|+.+....
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 3334567899999999999999999999999999987653
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=351.18 Aligned_cols=253 Identities=17% Similarity=0.193 Sum_probs=197.9
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcc---
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDER--- 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~--- 141 (508)
.+.|.+++.||+|+||.||+|+. .+++.||||++....... ...+.+|+.+++.++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688999999999999999995 668899999997654433 24688999999999999999999998766544
Q ss_pred -eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 142 -LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 142 -~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
|+||||++|++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 91 ~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999999963 456999999999999999999999999 9999999999999999999999999997554
Q ss_pred CC-------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCC
Q 010529 221 DG-------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFS 291 (508)
Q Consensus 221 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 291 (508)
.. ....||+.|+|||++.+..++.++||||||+++|+|+||+.||.......... ......... ...
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~ 243 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARH 243 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHHCCCCCHHHHS
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHhcCCCCCccccc
Confidence 32 23458999999999998899999999999999999999998875432111100 011100000 001
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHH-HHHhhc
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVT-LARLQT 328 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~-L~~~~~ 328 (508)
...+.++.+|+.+||..||.+||++.+++.+ +..+..
T Consensus 244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 1246779999999999999999987777765 555443
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=349.29 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=206.2
Q ss_pred cccccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC--Ccce
Q 010529 71 SDNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~ 142 (508)
.|++++.||+|+||.||+|++ .+++.||||++..... .....+.+|+.+++.++||||+++++++... ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 478889999999999999984 3588999999975432 3457899999999999999999999999876 5689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 102 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999999954 3456999999999999999999999999 999999999999999999999999999866543
Q ss_pred C-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh----------hccchhhhhccc
Q 010529 223 K-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI----------RGENLNLLMDSH 285 (508)
Q Consensus 223 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~----------~~~~~~~~~~~~ 285 (508)
. ...+|..|+|||++.+..++.++||||||+++|+|+||..|+........ ........+...
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2 33467779999999988899999999999999999999876433211100 001111122222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.....+...++.+.+|+.+||..||.+|||+.++++.|+.+.
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 233345566788999999999999999999999999998874
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=361.02 Aligned_cols=254 Identities=18% Similarity=0.201 Sum_probs=202.5
Q ss_pred CCCcccccccCCCC--cccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEK--AANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
.-.+|++++.||+| +||.||+|+.. +++.||||++....... .+.+.+|+.+++.++|||||++++++...+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34568999999999 99999999965 68999999997543222 356888999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
+|||||++++|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 9999999999999997655577999999999999999999999999 99999999999999999999999998753321
Q ss_pred ----------CCccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc----chhhhhcc-
Q 010529 222 ----------GKSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE----NLNLLMDS- 284 (508)
Q Consensus 222 ----------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~- 284 (508)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... ....+.+.
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 123467888999999987 5789999999999999999999988754211100000 00000000
Q ss_pred -----------------------------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 -----------------------------------HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 -----------------------------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......+...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00001223346779999999999999999999999988
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=344.53 Aligned_cols=253 Identities=19% Similarity=0.256 Sum_probs=205.2
Q ss_pred ccccccCCCCcccEEEEEEEc-CCC---EEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc-eeee
Q 010529 72 DNIVSESGEKAANVVYKGRLE-NRQ---WIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER-LLVA 145 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~-~lv~ 145 (508)
|.+.+.||+|+||.||+|.+. ++. .||||++...... ..+.+.+|+.+++.++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 344578999999999999943 333 6999998754321 245789999999999999999999999876655 9999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+.+++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 103 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 103 PYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 99999999999964 4567899999999999999999999999 999999999999999999999999999754332
Q ss_pred -----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 -----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
....+++.|+|||.+.+..++.++||||||+++|+|+||..||+.... .......+........+...+..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 256 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID----PFDLTHFLAQGRRLPQPEYCPDS 256 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----GGGHHHHHHTTCCCCCCTTCCHH
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC----HHHHHHHhhcCCCCCCCccchHH
Confidence 234567889999999988999999999999999999997767654321 11122222222222334455678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
+.+++.+||..||.+|||+.++++.|+.+....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=353.64 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=207.9
Q ss_pred CCcccccccCCCCcccEEEEEEEc--------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE--------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG 138 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 138 (508)
.++|.+.+.||+|+||.||+|... ++..||||++...... ....+.+|+.+++.+ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 457888999999999999999863 4678999999754321 245789999999999 999999999999999
Q ss_pred CcceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTE 192 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECT
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcC
Confidence 99999999999999999997532 124899999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccc
Q 010529 205 DGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGEN 277 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~ 277 (508)
++.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+.......
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----- 267 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----- 267 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-----
Confidence 999999999999765543 22345678999999988889999999999999999999 877764322111
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
....+........+..++..+.+++.+||..||.+|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111222233445667899999999999999999999999999998653
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=352.94 Aligned_cols=254 Identities=24% Similarity=0.300 Sum_probs=208.7
Q ss_pred ccccccCCCCcccEEEEEEEc-----CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeC--Cccee
Q 010529 72 DNIVSESGEKAANVVYKGRLE-----NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--DERLL 143 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~l 143 (508)
|++++.||+|+||.||++.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998743 578899999976532 1245689999999999999999999999874 56799
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~---~~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHh---hCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 999999999999995 345999999999999999999999999 9999999999999999999999999998665432
Q ss_pred -------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh----------hccchhhhhcccc
Q 010529 224 -------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI----------RGENLNLLMDSHL 286 (508)
Q Consensus 224 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~----------~~~~~~~~~~~~~ 286 (508)
...+|+.|+|||++.+..++.++||||||+++|+|+||..|+........ ........+....
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 23467779999999988899999999999999999999977654321110 0111222333333
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
....+..++..+.+|+.+||..||.+|||+.++++.|+.+...
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 3344556678899999999999999999999999999998654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=351.42 Aligned_cols=253 Identities=17% Similarity=0.258 Sum_probs=202.7
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCE----EEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQW----IAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..+|++++.||+|+||.||+|+. .+++. ||+|.+.... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence 45688999999999999999995 34543 5777775433 33467899999999999999999999999765 478
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+|+||+.+++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 93 ~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999965 4557999999999999999999999999 999999999999999999999999999765432
Q ss_pred C------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 K------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
. ...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.... .......+........+...+
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICT 245 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBC
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCccCC
Confidence 1 2235678999999999999999999999999999999 887764321 112222232333333455567
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.++.+|+.+||..||.+|||+.++++.|..+...
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 7899999999999999999999999999998753
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=346.82 Aligned_cols=255 Identities=19% Similarity=0.235 Sum_probs=208.6
Q ss_pred Ccccccc-cCCCCcccEEEEEEEc---CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVS-ESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
..|.+++ .||+|+||.||+|... ++..||||++...... ..+.+.+|+.+++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3456676 8999999999999853 5778999999765322 245799999999999999999999999 56678999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~- 223 (508)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999864 4456999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 ------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
...+|+.|+|||++.+..++.++||||||+++|+|+| |+.|+...... .....+........+...+.
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQGKRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHHHTTCCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHhcCCcCCCCCCcCH
Confidence 2235778999999988889999999999999999999 88776432111 11111222222334556678
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
.+.+++.+||..||.+|||+.+++++|+.+..+...
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999999999999998765433
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=350.45 Aligned_cols=254 Identities=21% Similarity=0.278 Sum_probs=200.1
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC--CCCCCcceeeeeeeC----Cccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL--RRKRLANLIGYCCAG----DERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~~~~~~~~~----~~~~l 143 (508)
.+|++++.||+|+||.||+|+.. ++.||||++... ....+..|.+++..+ +||||+++++++... ...++
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 36789999999999999999975 788999998543 234566677776665 999999999999877 67899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC--------CCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE--------GRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~--------~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
||||+++++|.+++.. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 113 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCC
Confidence 9999999999999953 4699999999999999999999998 8 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCCCCCccccccCCcCcc------ccchhhHHHHHHHHhC----------CCCCCchhhh
Q 010529 216 MKNSMDG--------KSYSTNLAYTPPEYLKNGRVIPE------SVIYSFGTVLLDLLSG----------KHIPPSHALD 271 (508)
Q Consensus 216 a~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~Dv~slG~vl~elltg----------~~~~~~~~~~ 271 (508)
+...... ....||+.|+|||++.+...+.. +|||||||++|||+|| +.|+......
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 9755432 23468999999999987666555 9999999999999999 4443221100
Q ss_pred hhhccchhh-hhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 272 MIRGENLNL-LMDSHLEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
......... ..........+ ..++..+.+|+.+||+.||.+|||+.+++++|+.+....+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 000000111 11111222222 2678889999999999999999999999999999987543
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=345.34 Aligned_cols=255 Identities=18% Similarity=0.256 Sum_probs=203.6
Q ss_pred CcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeee-eCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCC-AGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~-~~~~~~l 143 (508)
..|++.+.||+|+||.||+|+..+ ...||||.+...... ..+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 357788999999999999999533 235899998754321 2457899999999999999999999865 4567899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+++++|.+++.. ....+++..++.|+.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999964 4567899999999999999999999999 999999999999999999999999999755432
Q ss_pred -------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 -------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|++.... .......+........+...+
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC----TTTHHHHHHTTCCCCCCTTCC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC----HHHHHHHHhcCCCCCCCccCC
Confidence 233456789999999988999999999999999999996666543211 111111111111222234456
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
..+.+++.+||..||.+|||+.++++.|+.+....
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 77999999999999999999999999999987643
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=365.99 Aligned_cols=248 Identities=20% Similarity=0.253 Sum_probs=207.7
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
...|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467889999999999999999964 68999999996432 22356799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||++|++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999999996 4567999999999999999999999999 999999999999999999999999999866543
Q ss_pred -CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........ ...+.... ...+...++.+.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~s~~~~~ 245 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL----FKKICDGI--FYTPQYLNPSVIS 245 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH----HHHHHTTC--CCCCTTCCHHHHH
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcCC--cCCCccCCHHHHH
Confidence 34578999999999988765 6799999999999999999988754321111 11111111 1223345677999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
|+.+||..||.+|||+.++++|-+-
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~hp~~ 270 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREHEWF 270 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred HHHHHcCCCchhCcCHHHHHhCHHh
Confidence 9999999999999999999998554
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=348.25 Aligned_cols=260 Identities=17% Similarity=0.233 Sum_probs=201.6
Q ss_pred HhcCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 65 ATNNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 65 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
....+.+|.+++.||+|+||.||+|... +++.||||++....... .+.+.+|+.+++.++||||+++++++..++.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ 108 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence 3455788999999999999999999964 68899999997553322 3578999999999999999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.++||||++|++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 109 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 109 LYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999999964 356999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 221 DG-----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 221 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.. ....+++.|+|||++.+..++.++||||||+++|+|+||+.|+........... ...... .....+...+
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~--~~~~~~~~~~ 262 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH-INQAIP--RPSTVRPGIP 262 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH-HHSCCC--CGGGTSTTCC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH-hccCCC--CccccCCCCC
Confidence 33 234678999999999988899999999999999999999988765432211100 000000 0011233456
Q ss_pred HHHHHHHHHhcccCCCCCC-ChHHHHHHHHHhhcCC
Q 010529 296 TQVVGLASQCLQYEPRERP-STKNLVVTLARLQTKS 330 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rp-s~~~il~~L~~~~~~~ 330 (508)
..+.+++.+||..||.+|| |+.++++.|+......
T Consensus 263 ~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 263 VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 6799999999999999999 9999999999876543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-44 Score=345.91 Aligned_cols=253 Identities=19% Similarity=0.200 Sum_probs=199.5
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-----CChhHHHHHHHHhccCC---CCCCcceeeeeeeCC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-----PDPTQFKEEAEGVGKLR---RKRLANLIGYCCAGD 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~~ 139 (508)
.++|++++.||+|+||+||+|+. .+++.||||++..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 35688999999999999999994 6689999999864322 12346788888887774 999999999998755
Q ss_pred -----cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 140 -----ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 140 -----~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
..++||||+. ++|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCc
Confidence 4799999996 69999997655556999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhh-------hhcc
Q 010529 215 LMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL-------LMDS 284 (508)
Q Consensus 215 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-------~~~~ 284 (508)
++...... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... .+..
T Consensus 166 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 166 LARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp CTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred cccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 99765443 3457899999999999899999999999999999999999887543211110000000 0000
Q ss_pred -------ccC--CC-----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 285 -------HLE--GK-----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 285 -------~~~--~~-----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
... .. .....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 000 00 0112457789999999999999999999999874
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=350.08 Aligned_cols=257 Identities=18% Similarity=0.259 Sum_probs=206.1
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee----CCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~l 143 (508)
..+|.+++.||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45688999999999999999995 6789999999876544445679999999999999999999999873 346799
Q ss_pred eeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 144 VAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
||||+.+++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999988642 3467999999999999999999999999 99999999999999999999999998875432
Q ss_pred C-------------CccccCCCCCCccccccCC---cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc
Q 010529 222 G-------------KSYSTNLAYTPPEYLKNGR---VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285 (508)
Q Consensus 222 ~-------------~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 285 (508)
. ....||+.|+|||++.+.. ++.++||||||+++|+|++|+.|+..... ............
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~ 263 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---KGDSVALAVQNQ 263 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---TTSCHHHHHHCC
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---ccchhhHHhhcc
Confidence 1 1234689999999987543 68899999999999999999987643211 111111222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.....+...+..+.+|+.+||..||.+|||+.+++++|+.+...
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 22222344567899999999999999999999999999998643
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=370.11 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=198.3
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..++|++++.||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++...+..+|
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346789999999999999999995 56899999999753 22334578899999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999999863 4579999999999999999999998 88 999999999999999999999999999754332
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...++.+
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~ 376 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILME--EIRFPRTLGPEA 376 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHH
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHHhC--CCCCCccCCHHH
Confidence 345789999999999999999999999999999999999988754321111 1111111 112344566789
Q ss_pred HHHHHHhcccCCCCCC-----ChHHHHHHH
Q 010529 299 VGLASQCLQYEPRERP-----STKNLVVTL 323 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rp-----s~~~il~~L 323 (508)
.+|+.+||..||.+|| |+.++++|-
T Consensus 377 ~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 9999999999999999 999999873
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=378.13 Aligned_cols=245 Identities=20% Similarity=0.248 Sum_probs=201.9
Q ss_pred cCCCCcccEEEEEEEc---CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 77 ESGEKAANVVYKGRLE---NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.||+|+||.||+|.+. ++..||||+++.... ...+.|.+|+.+|++++|||||+++++|.. +..+||||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999864 456799999976533 346789999999999999999999999965 56899999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-------cc
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-------SY 225 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-------~~ 225 (508)
|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 3557999999999999999999999999 9999999999999999999999999998654332 12
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
.+++.|+|||++.+..++.++|||||||++|||+| |+.|+..... ..+...+........+..++..+.+||.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34578999999998899999999999999999998 8877654211 11122222222334455677889999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhhcC
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
||..||.+|||+.+|++.|+.+...
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999987543
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=359.65 Aligned_cols=249 Identities=22% Similarity=0.268 Sum_probs=201.4
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCC--CCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..|.+++.||+|+||.||+|...+++.||||++...... ..+.+.+|+.+|+.++ ||||+++++++...+..+|||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 348899999999999999999877999999999754432 2457899999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
| +.+++|.+++.. ...+++..+..|+.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||++......
T Consensus 136 E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 558899999974 457899999999999999999999999 99999999999995 589999999999865433
Q ss_pred ---CccccCCCCCCcccccc-----------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC
Q 010529 223 ---KSYSTNLAYTPPEYLKN-----------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (508)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...... ...+..++......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHEI 287 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHCTTSCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---HHHHHHHhCccccC
Confidence 24568999999999865 36888999999999999999999887542111 01122233332222
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 289 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.++...+..+.+|+.+||..||.+|||+.+++++.+-.
T Consensus 288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~ 325 (390)
T 2zmd_A 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325 (390)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence 33333466799999999999999999999999986654
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=345.43 Aligned_cols=245 Identities=12% Similarity=0.137 Sum_probs=203.2
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|.+++.||+|+||.||+|... +++.||||++....... ...+.+|+..+..+ +||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 35788899999999999999965 68999999997643332 45788999999999 9999999999999999999999
Q ss_pred ecCCCCCHHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC------------------
Q 010529 146 EYMPNDTLAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED------------------ 205 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~------------------ 205 (508)
||++|++|.+++.... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999999996432 256899999999999999999999999 9999999999999844
Q ss_pred -CCeEEcccCCccccCCCCccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc
Q 010529 206 -GDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD 283 (508)
Q Consensus 206 -~~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~ 283 (508)
..+||+|||++..........||+.|+|||++.+. .++.++||||||+++|+|++|.+++.... ....+..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~~~ 242 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-------QWHEIRQ 242 (289)
T ss_dssp CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-------HHHHHHT
T ss_pred ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-------HHHHHHc
Confidence 47999999999888777777899999999999765 56789999999999999999986543221 1111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 284 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
......+...+..+.+|+.+||..||.+|||+.++++|-
T Consensus 243 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 243 -GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp -TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred -CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 112233444567899999999999999999999999874
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=352.54 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=182.0
Q ss_pred cccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeeeecCCCCC
Q 010529 75 VSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||++|++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 36799999999999996 46899999999643 3467889999999996 9999999999999999999999999999
Q ss_pred HHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC---CeEEcccCCccccCCC----Ccc
Q 010529 153 LAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG---DPRLSCFGLMKNSMDG----KSY 225 (508)
Q Consensus 153 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~Dfg~a~~~~~~----~~~ 225 (508)
|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++ .+||+|||++...... ...
T Consensus 93 L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 169 (325)
T 3kn6_A 93 LFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP 169 (325)
T ss_dssp HHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccccc
Confidence 9999974 467999999999999999999999999 99999999999997665 7999999999765443 345
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC--C----HHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF--S----SEEATQVV 299 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~l~ 299 (508)
.+|+.|+|||++.+..++.++||||||+++|+|++|+.||....... .......++.....+.. + ...++++.
T Consensus 170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 248 (325)
T 3kn6_A 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAK 248 (325)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHH
T ss_pred CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHHHHcCCCCCCcccccCCCHHHH
Confidence 67999999999998899999999999999999999998875432111 11111122222111111 1 23467899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+|+.+||..||.+|||+.++++|-+
T Consensus 249 ~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 249 DLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp HHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred HHHHHHCCCChhHCCCHHHHhcChh
Confidence 9999999999999999999987643
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=340.03 Aligned_cols=245 Identities=20% Similarity=0.205 Sum_probs=204.6
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 5788899999999999999964 477899999987666677889999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCC---C
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDG---K 223 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~---~ 223 (508)
+++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||+ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998864 456899999999999999999999999 9999999999999 78899999999999765543 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH----HHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS----EEATQVV 299 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 299 (508)
...+|+.|+|||++.+ .++.++||||||+++|+|+||+.|+........ ...+.... ...+. ..++.+.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV----MLKIREGT--FTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCC--CCCCHHHHTTSCHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCC--CCCCchhhhcCCHHHH
Confidence 4568999999999865 489999999999999999999988654321110 11111111 11122 2467899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+|+.+||+.||.+|||+.+++++-+-
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEHEWF 265 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred HHHHHHccCChhhCcCHHHHhcCHHH
Confidence 99999999999999999999987443
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=365.38 Aligned_cols=250 Identities=15% Similarity=0.191 Sum_probs=183.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~ 141 (508)
++|.+++.||+|+||.||+|+. .+++.||||++...... ..+++.+|+.+|+.++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 5689999999999999999995 46899999999654322 245789999999999999999999998543 468
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|+||||+ +++|.+++. ....+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 133 ~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999998 578999886 4567999999999999999999999999 99999999999999999999999999986532
Q ss_pred C-------------------------------CccccCCCCCCcccc-ccCCcCccccchhhHHHHHHHHh---------
Q 010529 222 G-------------------------------KSYSTNLAYTPPEYL-KNGRVIPESVIYSFGTVLLDLLS--------- 260 (508)
Q Consensus 222 ~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~vl~ellt--------- 260 (508)
. ...+||+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1 234679999999986 45679999999999999999999
Q ss_pred --CCCCCCchhhhhh---------------------------hccc------------hhhhhcc---ccC---CCCCHH
Q 010529 261 --GKHIPPSHALDMI---------------------------RGEN------------LNLLMDS---HLE---GKFSSE 293 (508)
Q Consensus 261 --g~~~~~~~~~~~~---------------------------~~~~------------~~~~~~~---~~~---~~~~~~ 293 (508)
|+++|++.....+ .+.. ....+.. ... ......
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 4544433210000 0000 0000000 000 000122
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+.++.+|+.+||..||.+|||+.|+++|-
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp 398 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAHP 398 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence 367789999999999999999999999984
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=342.39 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=205.6
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.+.+|.+++.||.|+||.||+|... ++..||||++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567889999999999999999954 57789999985422 1234578999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999999864 356899999999999999999999999 999999999999999999999999988654433
Q ss_pred -CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
....+|+.|+|||++.+..++.++||||||+++|+|++|..|+......... ..+.. .....+...+..+.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~l 237 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY----KRISR--VEFTFPDFVTEGARDL 237 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHH--TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH----HHHHh--CCCCCCCcCCHHHHHH
Confidence 3457899999999999888999999999999999999999886543211110 11111 1122344456779999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+.+||..||.+|||+.++++|-+--.
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred HHHHhccChhhCCCHHHHhhCccccC
Confidence 99999999999999999999965443
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=343.03 Aligned_cols=252 Identities=20% Similarity=0.254 Sum_probs=203.2
Q ss_pred CCcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.++|.+.+.||+|+||.||+|++.+ +..||||.+..... ...+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4567888999999999999999543 33599999875432 234679999999999999999999999864 56789
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999999999964 3456899999999999999999999999 9999999999999999999999999988654432
Q ss_pred -----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 224 -----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...+++.|+|||++.+..++.++||||||+++|+|+| |+.|+..... ......+........+...++.
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDVIGVLEKGDRLPKPDLCPPV 242 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGHHHHHHHTCCCCCCTTCCHH
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHHHHHHhcCCCCCCCCCCCHH
Confidence 2345678999999988889999999999999999998 8877643211 1111111111122234445678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998753
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=349.22 Aligned_cols=240 Identities=18% Similarity=0.179 Sum_probs=202.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
.+|.+++.||+|+||.||+|+. .+++.||||++...... ....+.+|+.+++.++||||+++++++.+.+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 4688999999999999999994 56889999999765321 23468899999999999999999999999999
Q ss_pred ceeeeecCCCC-CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 141 RLLVAEYMPND-TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 141 ~~lv~E~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
.++||||+.+| +|.+++. ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 104 ~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 99999998766 9999986 4557999999999999999999999999 999999999999999999999999999866
Q ss_pred CCCC---ccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 220 MDGK---SYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 220 ~~~~---~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.... ...||+.|+|||++.+..+ +.++||||||+++|+|++|..||.... ....... ..+...+
T Consensus 181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----------~~~~~~~--~~~~~~~ 248 (335)
T 3dls_A 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE----------ETVEAAI--HPPYLVS 248 (335)
T ss_dssp CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG----------GGTTTCC--CCSSCCC
T ss_pred CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH----------HHHhhcc--CCCcccC
Confidence 5442 4468999999999988776 789999999999999999998865321 1111111 1122346
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+.+|+.+||..||.+|||+.+++++-+
T Consensus 249 ~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 249 KELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 67999999999999999999999998854
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=346.50 Aligned_cols=244 Identities=18% Similarity=0.173 Sum_probs=203.5
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.|.+++.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4788999999999999999964 6889999999764332 24679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC----CeEEcccCCcccc
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG----DPRLSCFGLMKNS 219 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~Dfg~a~~~ 219 (508)
||||+++++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 999999999999996 4567999999999999999999999999 99999999999999887 7999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----H
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS----S 292 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 292 (508)
... ....||+.|+|||++.+..++.++||||||+++|+|+||..|+........ ...+... ....+ .
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~i~~~--~~~~~~~~~~ 243 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANITSV--SYDFDEEFFS 243 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTT--CCCCCHHHHT
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhc--ccccChhhhc
Confidence 543 345689999999999988999999999999999999999988754321111 1111110 01111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
..+..+.+|+.+||..||.+|||+.++++|-
T Consensus 244 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp TCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 2356789999999999999999999999863
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=362.05 Aligned_cols=253 Identities=17% Similarity=0.136 Sum_probs=205.0
Q ss_pred HHhcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCC
Q 010529 64 AATNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139 (508)
Q Consensus 64 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 139 (508)
......++|++++.||+|+||.||+|+. .+++.||||++.+.. ......+.+|..++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 3445567889999999999999999996 468999999996421 112345889999999999999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..||||||++||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++..
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKL 212 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheec
Confidence 99999999999999999964 2347999999999999999999999999 999999999999999999999999999765
Q ss_pred CCC-----CccccCCCCCCccccc-------cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc---
Q 010529 220 MDG-----KSYSTNLAYTPPEYLK-------NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS--- 284 (508)
Q Consensus 220 ~~~-----~~~~~t~~y~aPE~~~-------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--- 284 (508)
... ....||+.|+|||++. +..++.++|||||||++|||++|+.||........ ...++..
T Consensus 213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~~~~ 288 (412)
T 2vd5_A 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET----YGKIVHYKEH 288 (412)
T ss_dssp CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTHHHH
T ss_pred cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH----HHHHHhcccC
Confidence 543 2357899999999987 35689999999999999999999988765322111 1111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCC---CChHHHHHHH
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRER---PSTKNLVVTL 323 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~R---ps~~~il~~L 323 (508)
...+..+...+.++.+|+.+||. +|.+| |++.++++|-
T Consensus 289 ~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 289 LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 00111123456789999999999 99998 6999998873
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=353.99 Aligned_cols=256 Identities=18% Similarity=0.265 Sum_probs=207.9
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC-C-----CEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCC
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN-R-----QWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGD 139 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 139 (508)
..+.|.+.+.||.|+||.||+|.... + ..||||.+...... ..+.+.+|+.+++.+ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45678899999999999999999543 2 47999999754322 245789999999999 8999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccC------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWE------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD 207 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~ 207 (508)
..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCe
Confidence 9999999999999999986431 346899999999999999999999999 999999999999999999
Q ss_pred eEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhh
Q 010529 208 PRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 280 (508)
+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+..... ......
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~~ 278 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----NSKFYK 278 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----SHHHHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----hHHHHH
Confidence 999999999755332 22345778999999988889999999999999999999 7766543211 111112
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 281 LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 222222223344456789999999999999999999999999988753
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=372.08 Aligned_cols=252 Identities=21% Similarity=0.248 Sum_probs=209.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..++|.+++.||+|+||.||+|+. .+|+.||||++... .......+.+|+.+|+.++|||||++++++.+.+..||
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 345688899999999999999996 46999999999643 22345678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||++||+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||++......
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 999999999999997544556999999999999999999999999 999999999999999999999999999876544
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...+.. ....++...+.++.+
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i~~-~~~~~p~~~s~~~~d 418 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKE-VPEEYSERFSPQARS 418 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHHHH-CCCCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHhhc-ccccCCccCCHHHHH
Confidence 235789999999999988899999999999999999999988754311000 0011111111 112334556788999
Q ss_pred HHHHhcccCCCCCC-----ChHHHHHH
Q 010529 301 LASQCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rp-----s~~~il~~ 322 (508)
|+.+||..||.+|| ++.++++|
T Consensus 419 LI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 419 LCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 99999999999999 78899887
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=355.58 Aligned_cols=252 Identities=15% Similarity=0.102 Sum_probs=196.8
Q ss_pred CCcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCC-----------ChhHHHHHHHHhccCCCCCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWP-----------DPTQFKEEAEGVGKLRRKRLANLIG 133 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nIv~~~~ 133 (508)
-.+|.+++.||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357889999999999999999964 5778999998755321 1234778888999999999999999
Q ss_pred eeee----CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC--C
Q 010529 134 YCCA----GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG--D 207 (508)
Q Consensus 134 ~~~~----~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~--~ 207 (508)
++.. ....++||||+ +++|.+++.. ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCc
Confidence 9987 67889999999 9999999964 337999999999999999999999999 99999999999998777 9
Q ss_pred eEEcccCCccccCCC-----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc
Q 010529 208 PRLSCFGLMKNSMDG-----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276 (508)
Q Consensus 208 ~kl~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~ 276 (508)
+||+|||+++..... ....||+.|+|||++.+..++.++||||||+++|||+||+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 999999999754321 234689999999999988899999999999999999999988754221111100
Q ss_pred chhhhhccccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 277 NLNLLMDSHLEGKFSS---------EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 277 ~~~~~~~~~~~~~~~~---------~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..... .....+. ..+.++.+++.+||..||.+|||+.+|++.|+.+..
T Consensus 272 ~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 TAKTN----LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHH----HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHh----hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 00000 0011111 345679999999999999999999999999987653
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=350.16 Aligned_cols=257 Identities=20% Similarity=0.315 Sum_probs=208.8
Q ss_pred CcccccccCCCCcccEEEEEEE-----cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCC--cce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-----ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD--ERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~~ 142 (508)
..|++++.||+|+||.||+|++ .+++.||||++........+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4578899999999999999984 358899999998655444568999999999999999999999987654 689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999999965 3456999999999999999999999999 999999999999999999999999999866543
Q ss_pred C-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh---hcc--------chhhhhcc
Q 010529 223 K-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI---RGE--------NLNLLMDS 284 (508)
Q Consensus 223 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~---~~~--------~~~~~~~~ 284 (508)
. ...++..|+|||++.+..++.++||||||+++|+|+||..|+........ ... .+...+..
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 22356679999999888899999999999999999999876543211111 000 11112222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
......+..++.++.+|+.+||..||.+|||+.++++.|+.+..
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22223445567889999999999999999999999999998864
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=350.07 Aligned_cols=246 Identities=18% Similarity=0.201 Sum_probs=198.9
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-CCCCcceeeeeee--CCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RKRLANLIGYCCA--GDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~--~~~~~lv 144 (508)
-++|++++.||+|+||.||+|+. .+++.||||++... ..+.+.+|+.+++.++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 45689999999999999999994 66899999999643 3678999999999996 9999999999987 5678999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~~- 222 (508)
|||+.+++|.+++. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||++......
T Consensus 112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999999884 4889999999999999999999999 99999999999999776 8999999999765443
Q ss_pred --CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhh---------hhccchhh----------
Q 010529 223 --KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM---------IRGENLNL---------- 280 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~---------~~~~~~~~---------- 280 (508)
....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.|+....... ........
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence 34567889999999876 668999999999999999999998874321100 00000000
Q ss_pred -------------hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 281 -------------LMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 281 -------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+........+...+..+.+|+.+||..||.+|||+.++++|-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0001111112223567899999999999999999999999873
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=343.80 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=203.9
Q ss_pred Ccccccc-cCCCCcccEEEEEEE---cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVS-ESGEKAANVVYKGRL---ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..|.+.+ .||+|+||.||+|.+ .+++.||||++....... .+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4577777 899999999999964 346789999997654322 45799999999999999999999999 6677899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 456999999999999999999999999 9999999999999999999999999998654432
Q ss_pred c-------cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 224 S-------YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 224 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
. ..+++.|+|||++.+..++.++||||||+++|+|+| |+.|+...... .....+........+...+
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCC
Confidence 2 234577999999988889999999999999999999 88776432111 1112222222233445567
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..+.+++.+||..||.+|||+.++++.|+.+..
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 889999999999999999999999999998864
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=345.45 Aligned_cols=256 Identities=18% Similarity=0.244 Sum_probs=197.9
Q ss_pred CCCcccccccCCCCcccEEEEEEEc----CCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCC--
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGD-- 139 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-- 139 (508)
..+.|.+.+.||+|+||.||+|... ++..||||++....... .+.+.+|+.++++++||||+++++++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3456788899999999999999853 34579999997554322 356899999999999999999999997754
Q ss_pred ---cceeeeecCCCCCHHHHhhcc----CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcc
Q 010529 140 ---ERLLVAEYMPNDTLAKHLFHW----EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212 (508)
Q Consensus 140 ---~~~lv~E~~~~~sL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 212 (508)
..++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECS
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEee
Confidence 349999999999999998432 3456999999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccc
Q 010529 213 FGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSH 285 (508)
Q Consensus 213 fg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 285 (508)
||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..|+...... .....+...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~ 265 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMYDYLLHG 265 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTT
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHHHcC
Confidence 9998765432 22345778999999998899999999999999999999 66554332111 111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.....+...+..+.+++.+||..||.+|||+.+++++|+.+...
T Consensus 266 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 266 HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 12233445667899999999999999999999999999998753
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=353.11 Aligned_cols=250 Identities=19% Similarity=0.175 Sum_probs=200.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-----CCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-----RKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv~~~~~~~~~~~~~l 143 (508)
..|.+++.||+|+||.||+|+. .+++.||||++.... .....+..|+.+++.+. ||||+++++++...+..++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 4678999999999999999995 568899999996422 22456788999999886 9999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-------------------
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE------------------- 204 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~------------------- 204 (508)
||||+ +++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99999 899999997655567999999999999999999999999 999999999999975
Q ss_pred ------CCCeEEcccCCccccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh---
Q 010529 205 ------DGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR--- 274 (508)
Q Consensus 205 ------~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~--- 274 (508)
++.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.........
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 271 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 789999999999865443 4567899999999999999999999999999999999999887542110000
Q ss_pred ----ccch------------hhhhc-c----ccCCCC-------------C---HHHHHHHHHHHHHhcccCCCCCCChH
Q 010529 275 ----GENL------------NLLMD-S----HLEGKF-------------S---SEEATQVVGLASQCLQYEPRERPSTK 317 (508)
Q Consensus 275 ----~~~~------------~~~~~-~----~~~~~~-------------~---~~~~~~l~~l~~~cl~~~p~~Rps~~ 317 (508)
.... ...+. . .+.... + ...++.+.+|+.+||+.||.+|||+.
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~ 351 (360)
T 3llt_A 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351 (360)
T ss_dssp HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence 0000 00000 0 000000 0 00126688999999999999999999
Q ss_pred HHHHH
Q 010529 318 NLVVT 322 (508)
Q Consensus 318 ~il~~ 322 (508)
++++|
T Consensus 352 elL~h 356 (360)
T 3llt_A 352 ELLKH 356 (360)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99876
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=349.84 Aligned_cols=253 Identities=21% Similarity=0.306 Sum_probs=205.4
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
..|.+.+.||+|+||.||+|... ++..||||++...... ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 46788999999999999999854 3678999999754321 2346899999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC--------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 143 LVAEYMPNDTLAKHLFHWE--------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999986421 145789999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccC
Q 010529 215 LMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 215 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+........ ...+.. ...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----~~~~~~-~~~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----LRFVME-GGL 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH----HHHHHT-TCC
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH----HHHHHc-CCc
Confidence 98755332 22345788999999988889999999999999999999 6655433211100 111111 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
...+...+..+.+|+.+||..||.+|||+.+++++|+.+..
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 22344566789999999999999999999999999988754
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=341.69 Aligned_cols=253 Identities=19% Similarity=0.239 Sum_probs=208.9
Q ss_pred HhcCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 65 ATNNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 65 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
..-..++|.+++.||+|+||.||+|+.. ++..||||++.... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 88 (284)
T 2vgo_A 9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR 88 (284)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred cchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE
Confidence 3345677899999999999999999964 57889999986431 2234679999999999999999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999999999999964 346899999999999999999999999 9999999999999999999999999986544
Q ss_pred CC--CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 221 DG--KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 221 ~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.. ....|++.|+|||++.+..++.++||||||+++|+|++|..|+........ ...+... ...++...+..+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~ 239 (284)
T 2vgo_A 166 SLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET----HRRIVNV--DLKFPPFLSDGS 239 (284)
T ss_dssp SSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTT--CCCCCTTSCHHH
T ss_pred ccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH----HHHHhcc--ccCCCCcCCHHH
Confidence 32 345688999999999988899999999999999999999988654321111 1111111 112344456789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+++.+||..||.+|||+.++++|-+-.
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~h~~~~ 267 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVMEHPWVK 267 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred HHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence 9999999999999999999999885443
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=352.63 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=200.6
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.|.+++.||+|+||.||+|... +++.||||++..... .+.+|++++.++ +||||+++++++.++...|+||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 35788999999999999999964 588999999975542 346788888888 899999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC----CCeEEcccCCccccCCC-
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED----GDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~----~~~kl~Dfg~a~~~~~~- 222 (508)
|+||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||+.++ +.+||+|||++......
T Consensus 98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 99999999986 4567999999999999999999999999 9999999999998533 35999999999865433
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEATQ 297 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 297 (508)
....||+.|+|||++.+..++.++|||||||++|+|++|..||........ ......+.... .....+...+..
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWNSVSDT 253 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH-HHHHHHHHHCCCCCCSTTTTTSCHH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH-HHHHHHHccCCcccCccccccCCHH
Confidence 345689999999999888899999999999999999999988753210000 00011111111 111123346778
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+.+|+.+||..||.+|||+.++++|-+-.
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~hp~~~ 282 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLRHPWIV 282 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence 99999999999999999999999986654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=339.50 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=187.9
Q ss_pred hcCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 66 TNNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 66 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
...+.+|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 7 g~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (278)
T 3cok_A 7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV 86 (278)
T ss_dssp CSSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEE
T ss_pred ccccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeE
Confidence 34567889999999999999999995 578999999986432 22346799999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 87 YLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999999864 3467999999999999999999999999 99999999999999999999999999876543
Q ss_pred C----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 222 G----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 222 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
. ....+|+.|+|||++.+..++.++||||||+++|+|++|+.|+...... ......... ....+...+.+
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~--~~~~~~~~~~~ 238 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK----NTLNKVVLA--DYEMPSFLSIE 238 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHH
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH----HHHHHHhhc--ccCCccccCHH
Confidence 2 2356899999999998888999999999999999999999876532111 001111111 11223445678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+|+.+||..||.+|||+.+++++-
T Consensus 239 ~~~li~~~l~~dp~~Rps~~~~l~h~ 264 (278)
T 3cok_A 239 AKDLIHQLLRRNPADRLSLSSVLDHP 264 (278)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTST
T ss_pred HHHHHHHHcccCHhhCCCHHHHhcCc
Confidence 99999999999999999999999763
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=343.89 Aligned_cols=248 Identities=18% Similarity=0.251 Sum_probs=207.4
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.|.+++.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++......++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 477889999999999999995 5688999999975543 34578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
++++|.+++. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999984 467999999999999999999999999 999999999999999999999999998765433 34
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..+|+.|+|||++.+..++.++||||||+++|+|++|+.|+....... ....+........+...+..+.+|+.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-----VLFLIPKNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-----HHHHhhcCCCCCCccccCHHHHHHHHH
Confidence 567899999999998889999999999999999999998764321110 111111111222333456779999999
Q ss_pred hcccCCCCCCChHHHHHHHHHhh
Q 010529 305 CLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
||..||.+|||+.+++++..-..
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHHHHH
T ss_pred HcCCChhhCcCHHHHhhChhhhc
Confidence 99999999999999999876554
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=348.63 Aligned_cols=257 Identities=18% Similarity=0.255 Sum_probs=207.4
Q ss_pred cCCCcccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG 138 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 138 (508)
-..++|.+.+.||+|+||.||+|.+ .+++.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 3456788999999999999999984 24678999999754322 234789999999999 799999999998775
Q ss_pred C-cceeeeecCCCCCHHHHhhccCC--------------CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC
Q 010529 139 D-ERLLVAEYMPNDTLAKHLFHWEK--------------QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203 (508)
Q Consensus 139 ~-~~~lv~E~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~ 203 (508)
+ ..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~ 182 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLS 182 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEC
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEEC
Confidence 4 48999999999999999975322 12889999999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhcc
Q 010529 204 EDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGE 276 (508)
Q Consensus 204 ~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~ 276 (508)
.++.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..|+...... .
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~ 258 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----E 258 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS----H
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh----H
Confidence 99999999999998654432 2356788999999998899999999999999999998 87765432110 0
Q ss_pred chhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 277 NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.....+........+...++.+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111112222344456789999999999999999999999999998864
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=346.61 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=197.5
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+.+|++++.||+|+||.||+|... +++.||||++....... .+.+.+|+.++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 357889999999999999999964 58999999986554322 356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
||+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999998876 4567999999999999999999999999 999999999999999999999999999765532
Q ss_pred -CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-------cchh---------hhhcc
Q 010529 223 -KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-------ENLN---------LLMDS 284 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------~~~~---------~~~~~ 284 (508)
....+|+.|+|||++.+ ..++.++||||||+++|+|+||+.|+.......... .... .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 33467899999999876 567999999999999999999998875432110000 0000 00000
Q ss_pred ----ccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 ----HLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 ----~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... ....+..+.+|+.+||..||.+|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000 02345678999999999999999999999987
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=343.25 Aligned_cols=249 Identities=16% Similarity=0.193 Sum_probs=203.9
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
..|.+++.||+|+||.||+|+.. +++.||||++..........+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 35788899999999999999964 68999999998665445567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCC--C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDG--K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~--~ 223 (508)
++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||++...... .
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999998863 456899999999999999999999999 9999999999999 78899999999998765443 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l 301 (508)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+........ ...+.... .........+..+.+|
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~l 241 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL----FEKIKEGYYEFESPFWDDISESAKDF 241 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHCCCCCCTTTTTTSCHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCccccccCCHHHHHH
Confidence 34589999999999988899999999999999999999988654321111 11111111 1112233456789999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.+||..||.+|||+.+++++-+-
T Consensus 242 i~~~l~~dp~~Rps~~~~l~h~~~ 265 (304)
T 2jam_A 242 ICHLLEKDPNERYTCEKALSHPWI 265 (304)
T ss_dssp HHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred HHHHcCCChhHCcCHHHHhcCccc
Confidence 999999999999999999987553
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=344.93 Aligned_cols=248 Identities=19% Similarity=0.164 Sum_probs=197.6
Q ss_pred ccccc-ccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeec
Q 010529 71 SDNIV-SESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 71 ~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.|+++ +.||+|+||.||+|+ ..+++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 46665 679999999999999 457899999999876655677899999999985 899999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC---eEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD---PRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~Dfg~a~~~~~~-- 222 (508)
++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999964 356899999999999999999999999 999999999999987766 999999998754321
Q ss_pred ---------CccccCCCCCCcccccc-----CCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----------hccc
Q 010529 223 ---------KSYSTNLAYTPPEYLKN-----GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----------RGEN 277 (508)
Q Consensus 223 ---------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----------~~~~ 277 (508)
....||+.|+|||++.+ ..++.++||||||+++|+|+||+.||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13358999999999875 5588999999999999999999988754311000 0000
Q ss_pred hhhhhccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 278 LNLLMDSHLEGKFSS----EEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...+.... ..++. ..+..+.+|+.+||..||.+|||+.++++|-
T Consensus 250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 01111111 11222 2457799999999999999999999999874
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=340.14 Aligned_cols=250 Identities=17% Similarity=0.184 Sum_probs=205.3
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.++|++++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 45688999999999999999995 45889999999754332 2356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC---eEEcccCCccccCCC
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD---PRLSCFGLMKNSMDG 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~Dfg~a~~~~~~ 222 (508)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999999988863 456999999999999999999999999 999999999999976655 999999999765544
Q ss_pred C---ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHHHHHH
Q 010529 223 K---SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSEEATQ 297 (508)
Q Consensus 223 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 297 (508)
. ...||+.|+|||++.+..++.++||||||+++|+|++|+.|+.......... .+..... ........++.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 237 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA----QIKAGAYDYPSPEWDTVTPE 237 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCCTTTTTTSCHH
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH----HHHhccccCCchhhcccCHH
Confidence 3 3568999999999998899999999999999999999998875432211111 1111111 11112245677
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.+|+.+||+.||.+|||+.+++++-+-
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 238 AKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred HHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 9999999999999999999999998554
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-44 Score=348.10 Aligned_cols=254 Identities=19% Similarity=0.266 Sum_probs=196.4
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
++.|.+++.||+|+||.||+|+.. +++.||||++....... ...+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 357899999999999999999964 68899999997543222 2356689999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 997 589888865 4557999999999999999999999999 999999999999999999999999998755432
Q ss_pred CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-------cchhhhhcccc--------
Q 010529 223 KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-------ENLNLLMDSHL-------- 286 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------~~~~~~~~~~~-------- 286 (508)
....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.......... ......+....
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 23467899999999876 568999999999999999999998876532111000 00000000000
Q ss_pred -----CCC----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 287 -----EGK----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 287 -----~~~----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
... .....+.++.+|+.+||..||.+|||+.++++|-+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 285 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhh
Confidence 000 011235678999999999999999999999998443
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-44 Score=366.47 Aligned_cols=252 Identities=17% Similarity=0.203 Sum_probs=207.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC---CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..+.|.+++.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++......||
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 4567888899999999999999964 69999999996432 2335678999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccC--CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 144 VAEYMPNDTLAKHLFHWE--KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
||||++||+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999999986432 446999999999999999999999999 99999999999999999999999999986544
Q ss_pred C----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 222 G----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 222 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
. ....||+.|+|||++.+..++.++|||||||++|||+||+.||...............+... ...++...+..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~ 419 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPA 419 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHH
Confidence 3 23479999999999999899999999999999999999998876431100000011111111 11234556788
Q ss_pred HHHHHHHhcccCCCCCCCh-----HHHHHH
Q 010529 298 VVGLASQCLQYEPRERPST-----KNLVVT 322 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~-----~~il~~ 322 (508)
+.+|+.+||..||.+||++ .+|+.|
T Consensus 420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 9999999999999999975 677765
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=352.06 Aligned_cols=249 Identities=20% Similarity=0.144 Sum_probs=197.7
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC-----CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV-----AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.|++++.||+|+||.||+|.. .++..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 568889999999999999995 56888999998643 223456899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhcc--------------------------------------CCCCcChHHHHHHHHHHHHHHHHHHh
Q 010529 145 AEYMPNDTLAKHLFHW--------------------------------------EKQTIEWPLRLRVAFYIAEALDYCNT 186 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~i~~~L~~lH~ 186 (508)
|||++|++|.+++... ....+++..++.|+.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988421 02234677889999999999999999
Q ss_pred CCCceeecCCCcceeeCCCC--CeEEcccCCccccCC--------CCccccCCCCCCcccccc--CCcCccccchhhHHH
Q 010529 187 EGRPLYHDLNAYRVLFDEDG--DPRLSCFGLMKNSMD--------GKSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTV 254 (508)
Q Consensus 187 ~~~iiH~Dikp~Nill~~~~--~~kl~Dfg~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~v 254 (508)
.+ |+||||||+|||++.++ .+||+|||++..... .....||+.|+|||++.+ ..++.++||||||++
T Consensus 187 ~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 QG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp TT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred CC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 99 99999999999998776 899999999975422 134568999999999875 678899999999999
Q ss_pred HHHHHhCCCCCCchhhhhhhccchhhhhccccCCC--CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 255 LLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK--FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 255 l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+|+|++|+.||....... ....++....... .....++.+.+|+.+||..||.+|||+.+++++-+
T Consensus 266 l~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDAD----TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333 (345)
T ss_dssp HHHHHHSSCSSCCSSHHH----HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred HHHHHHCCCCCCCCChHH----HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence 999999998875432111 1111111111111 11234678999999999999999999999999844
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=347.36 Aligned_cols=255 Identities=21% Similarity=0.277 Sum_probs=203.7
Q ss_pred CCcccccccCCCCcccEEEEEEE------cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
...|.+++.||+|+||.||+|++ .++..||||++..... ....++.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35678899999999999999984 2477899999964432 2245789999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCC-----CCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEccc
Q 010529 142 LLVAEYMPNDTLAKHLFHWEK-----QTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCF 213 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Df 213 (508)
++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++. +..+||+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcc
Confidence 999999999999999975322 45899999999999999999999999 999999999999984 446999999
Q ss_pred CCccccCC------CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhcccc
Q 010529 214 GLMKNSMD------GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHL 286 (508)
Q Consensus 214 g~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (508)
|++..... .....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+...... .....+....
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~ 262 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFVTSGG 262 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTC
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHHhcCC
Confidence 99864322 233456889999999988889999999999999999999 77665432111 1111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
....+...+..+.+|+.+||..||.+|||+.+++++|+.+...
T Consensus 263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 2223445567899999999999999999999999999988653
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=339.57 Aligned_cols=247 Identities=18% Similarity=0.148 Sum_probs=197.0
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.|.+.+.||+|+||.||+|.. .++..||||++..... ...+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 567889999999999999995 4588999999976542 34578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCC-
Q 010529 149 PNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 149 ~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~- 222 (508)
++++|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999988542 2467999999999999999999999999 9999999999999 45688999999999765433
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....+|+.|+|||++. +.++.++||||||+++|+|++|+.|+............ ..............++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA---TYKEPNYAVECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCCCCC--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh---ccCCcccccccCcCCHHHHH
Confidence 3456889999999985 56889999999999999999999887543221111100 00000000001123567899
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
|+.+||..||.+|||+.+++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999976
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=355.08 Aligned_cols=259 Identities=14% Similarity=0.141 Sum_probs=208.1
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCC--cceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD--ERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~~lv~ 145 (508)
..|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46889999999999999999965 58999999997543 233567889999999999999999999998755 679999
Q ss_pred ecCCCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee----CCCCCeEEcccCCccccC
Q 010529 146 EYMPNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF----DEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~Dfg~a~~~~ 220 (508)
||++|++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999996432 223999999999999999999999999 9999999999999 777889999999998665
Q ss_pred CC---CccccCCCCCCcccccc--------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc------
Q 010529 221 DG---KSYSTNLAYTPPEYLKN--------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD------ 283 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~------ 283 (508)
.. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||............+..++.
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 24568999999999864 56788999999999999999999876431100000000000000
Q ss_pred ---------------c--ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 284 ---------------S--HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 284 ---------------~--~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
. ..........+..+.+++.+||..||++|||+.++++.+..+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 011123467888999999999999999999999999999998654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=361.87 Aligned_cols=249 Identities=16% Similarity=0.188 Sum_probs=192.9
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
..+|++++.||+|+||.||+|.. .+++.||||++.... ....+++.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 35688999999999999999994 568899999997542 122457889999999999999999999996553
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..||||||+.+ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 46999999975 5767663 24899999999999999999999999 999999999999999999999999999866
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------cc-------------
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GE------------- 276 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~------------- 276 (508)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....... +.
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 543 4467899999999999999999999999999999999999887653210000 00
Q ss_pred -------------chhhhhccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 277 -------------NLNLLMDSHLEGKF---SSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 277 -------------~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+...+........ ....+.++.+|+.+||..||.+|||+.|+++|-
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 00000000000000 012267899999999999999999999999884
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=336.54 Aligned_cols=248 Identities=19% Similarity=0.158 Sum_probs=202.6
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|++++.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45788999999999999999964 688999999975433 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC------
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------ 221 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~------ 221 (508)
+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999985 3457999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 222 GKSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|+.|+........ ..................+..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH---HHHHHHTTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHhhhcccccCchhhcCHHHHH
Confidence 234567899999999987665 7799999999999999999988754321100 011111111111112345677899
Q ss_pred HHHHhcccCCCCCCChHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L 323 (508)
|+.+||..||.+|||+.+++++-
T Consensus 241 li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHCCCCchhCCCHHHHhcCc
Confidence 99999999999999999998763
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=349.69 Aligned_cols=254 Identities=18% Similarity=0.276 Sum_probs=200.3
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+++|++++.||+|+||.||+|+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 4567899999999999999999964 58999999986554322 34578999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||+++++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999999988765 4557999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-------cc-------------hh
Q 010529 223 --KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-------EN-------------LN 279 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------~~-------------~~ 279 (508)
....+|+.|+|||++.+. .++.++||||||+++|+|++|+.||.......... .. ..
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 345689999999999765 68899999999999999999998876432110000 00 00
Q ss_pred hhhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 280 LLMDSHLEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 280 ~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
....+......+ ...+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 000000000111 134678999999999999999999999998743
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=339.73 Aligned_cols=251 Identities=18% Similarity=0.225 Sum_probs=201.7
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
+.++.....||+|+||.||+|.. .++..||||.+........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 44455556789999999999995 56889999999876655567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCccccCCC---
Q 010529 148 MPNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~~~~~--- 222 (508)
+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++. ++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 99999999997532 235678899999999999999999999 999999999999987 899999999998765432
Q ss_pred -CccccCCCCCCccccccCC--cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 -KSYSTNLAYTPPEYLKNGR--VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 -~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+.. ++.++||||||+++|+|++|+.|+......... .............+...+..+.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 256 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVGMFKVHPEIPESMSAEAK 256 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHHHHCCCCCCCTTSCHHHH
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhccccccccccccCCHHHH
Confidence 3456889999999997643 788999999999999999999876432111000 0000011122234455677899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+|+.+||..||.+|||+.+++++-
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~~~ 280 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLVDE 280 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred HHHHHHccCChhhCCCHHHHhcCh
Confidence 999999999999999999999763
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=355.09 Aligned_cols=246 Identities=17% Similarity=0.185 Sum_probs=191.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--------CChhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--------PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
+.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+|++++||||+++++++. .+.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 4678899999999999999995 5588999999865321 12236899999999999999999999975 556
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC---CCeEEcccCCcc
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED---GDPRLSCFGLMK 217 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~Dfg~a~ 217 (508)
.++||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++
T Consensus 214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 899999999999999886 4567999999999999999999999999 9999999999999654 459999999998
Q ss_pred ccCCC---CccccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
..... ....||+.|+|||++.+ ..++.++||||||+++|+|+||..||..... .......+........+
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~i~~~~~~~~~ 366 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQITSGKYNFIP 366 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----SCCHHHHHHTTCCCCCH
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----hHHHHHHHhcCCCCCCc
Confidence 76543 34578999999999853 5678899999999999999999988654211 11111111111111111
Q ss_pred ---HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 292 ---SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 292 ---~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...+..+.+|+.+||..||.+|||+.++++|-
T Consensus 367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 12367799999999999999999999999874
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-44 Score=349.08 Aligned_cols=249 Identities=17% Similarity=0.147 Sum_probs=206.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
....|.+.+.||+|+||.||++... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3457889999999999999999964 5888999998754322 24578999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+.+++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999998863 357999999999999999999999999 999999999999999999999999999765422
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+..++.++||||||+++|+|++|+.|+........ ...+... ....+...+..+.
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~ 269 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKN--EYSIPKHINPVAA 269 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHT--CCCCCTTSCHHHH
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHhcC--CCCCCccCCHHHH
Confidence 335689999999999988899999999999999999999988654321110 0111111 1122334567789
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+|+.+||..||.+|||+.+++++-+-
T Consensus 270 ~li~~~l~~dp~~Rps~~ell~~~~~ 295 (335)
T 2owb_A 270 SLIQKMLQTDPTARPTINELLNDEFF 295 (335)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred HHHHHHccCChhHCcCHHHHhcCccc
Confidence 99999999999999999999998554
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=357.53 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=188.0
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCC-CCCCcceeeeeeeCC--cce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLR-RKRLANLIGYCCAGD--ERL 142 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~--~~~ 142 (508)
..+|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++..+. ||||+++++++...+ ..|
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 35688999999999999999995 56899999998654222 2456889999999996 999999999997544 689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
+|||||. ++|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 88 lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 9999997 689998853 57999999999999999999999999 99999999999999999999999999975432
Q ss_pred ------------------------CCccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc
Q 010529 222 ------------------------GKSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276 (508)
Q Consensus 222 ------------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~ 276 (508)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||++.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 242 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 123468999999999976 6789999999999999999999988765321100000
Q ss_pred ch-------hhhh----------------------ccccCCC------------CCHHHHHHHHHHHHHhcccCCCCCCC
Q 010529 277 NL-------NLLM----------------------DSHLEGK------------FSSEEATQVVGLASQCLQYEPRERPS 315 (508)
Q Consensus 277 ~~-------~~~~----------------------~~~~~~~------------~~~~~~~~l~~l~~~cl~~~p~~Rps 315 (508)
.. ...+ ....... .....++++.+|+.+||..||.+|||
T Consensus 243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 00 0000 0000000 00123567899999999999999999
Q ss_pred hHHHHHH
Q 010529 316 TKNLVVT 322 (508)
Q Consensus 316 ~~~il~~ 322 (508)
+.++++|
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999988
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=348.51 Aligned_cols=252 Identities=17% Similarity=0.223 Sum_probs=192.5
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+++|.+++.||+|+||.||+|+. .+++.||||++....... ...+.+|+.+++.++||||+++++++.+....+||
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 456789999999999999999994 568899999997543322 45688999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee-----CCCCCeEEcccCCcccc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF-----DEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill-----~~~~~~kl~Dfg~a~~~ 219 (508)
|||+. ++|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++...
T Consensus 112 ~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99997 599999864 446999999999999999999999999 9999999999999 44556999999998755
Q ss_pred CCC----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhh-------hh-----
Q 010529 220 MDG----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL-------LM----- 282 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-------~~----- 282 (508)
... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||............... .+
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence 422 334679999999999874 4799999999999999999999887543211100000000 00
Q ss_pred ----cccc---CCC-----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 283 ----DSHL---EGK-----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 283 ----~~~~---~~~-----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.... ... .+...+.++.+|+.+||..||.+|||+.++++|-
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 320 (329)
T 3gbz_A 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320 (329)
T ss_dssp STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence 0000 000 0011357789999999999999999999999864
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=352.86 Aligned_cols=256 Identities=15% Similarity=0.133 Sum_probs=203.9
Q ss_pred CcccccccCCCCcccEEEEEEEcC---------CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcc----------
Q 010529 70 SSDNIVSESGEKAANVVYKGRLEN---------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLAN---------- 130 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~---------- 130 (508)
..|.+++.||+|+||.||+|+... ++.||||++... ..+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578899999999999999999653 788999998643 46899999999999999887
Q ss_pred -----eeeeeee-CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 131 -----LIGYCCA-GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 131 -----~~~~~~~-~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
+++++.. ....++||||+ +++|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 6677766 67789999999 999999997544578999999999999999999999999 999999999999999
Q ss_pred CC--CeEEcccCCccccCCC-----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhh
Q 010529 205 DG--DPRLSCFGLMKNSMDG-----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD 271 (508)
Q Consensus 205 ~~--~~kl~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~ 271 (508)
++ .+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|+||+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 8999999999754322 2346899999999999889999999999999999999999887543211
Q ss_pred hhhccc-hhhhhccc--cCCC--CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 272 MIRGEN-LNLLMDSH--LEGK--FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 272 ~~~~~~-~~~~~~~~--~~~~--~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
...... ........ +... .....+..+.+|+.+||..||.+|||+.++++.|+.+......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 000000 00000000 0000 0112357799999999999999999999999999998765543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=347.25 Aligned_cols=256 Identities=23% Similarity=0.277 Sum_probs=197.8
Q ss_pred cCCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHh--ccCCCCCCcceeeeeee-----CC
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGV--GKLRRKRLANLIGYCCA-----GD 139 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l--~~l~h~nIv~~~~~~~~-----~~ 139 (508)
-++++|++++.||+|+||.||+|+. +++.||||++.... ...+..|.+++ ..++||||+++++++.. ..
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 4567899999999999999999987 67889999996432 34555555554 45899999999986542 23
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC---------CCceeecCCCcceeeCCCCCeEE
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE---------GRPLYHDLNAYRVLFDEDGDPRL 210 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---------~~iiH~Dikp~Nill~~~~~~kl 210 (508)
..++||||+++++|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEE
Confidence 56899999999999999953 4568999999999999999999999 8 999999999999999999999
Q ss_pred cccCCccccCCC------------CccccCCCCCCcccccc-------CCcCccccchhhHHHHHHHHhCCCCCCchhhh
Q 010529 211 SCFGLMKNSMDG------------KSYSTNLAYTPPEYLKN-------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD 271 (508)
Q Consensus 211 ~Dfg~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~ 271 (508)
+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|||+||..|+......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999754322 23458999999999976 45677999999999999999997665432110
Q ss_pred hh---------hc-c---chhh-hhccccCCCC------CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 272 MI---------RG-E---NLNL-LMDSHLEGKF------SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 272 ~~---------~~-~---~~~~-~~~~~~~~~~------~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.. .. . .... .........+ ....++.+.+|+.+||..||.+|||+.++++.|+.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 00 00 0 0000 0011111111 2346778999999999999999999999999999987543
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=353.24 Aligned_cols=254 Identities=19% Similarity=0.225 Sum_probs=203.7
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
..+|++++.||+|+||.||+|... ++..||+|++...... ..+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356889999999999999999964 6889999999765322 24578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccC--CCC
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM--DGK 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~--~~~ 223 (508)
|++|++|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++.... ...
T Consensus 112 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 112 HMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999999964 34689999999999999999999996 8 9999999999999999999999999986432 224
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc----------------------------
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG---------------------------- 275 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---------------------------- 275 (508)
...||+.|+|||++.+..++.++||||||+++|+|+||+.||..........
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence 4578999999999998899999999999999999999998875432111000
Q ss_pred ------cch----hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 276 ------ENL----NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 276 ------~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
... ..+.............+.++.+|+.+||..||.+|||+.++++|-+-
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 328 (360)
T 3eqc_A 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328 (360)
T ss_dssp -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 000 00000111111112246679999999999999999999999998543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=349.94 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=194.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCC------c
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGD------E 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------~ 140 (508)
..|++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 5688999999999999999995 568999999996543221 357889999999999999999999997653 4
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 8999999853 56999999999999999999999999 9999999999999999999999999998655
Q ss_pred CC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhh----------
Q 010529 221 DG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLL---------- 281 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~---------- 281 (508)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....... +......
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 44678999999999877 67899999999999999999999887643211000 0000000
Q ss_pred --hc---ccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 282 --MD---SHL---EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 282 --~~---~~~---~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+. ... ........++.+.+|+.+||..||.+|||+.++++|-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 00 000 0011223467799999999999999999999999873
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=345.73 Aligned_cols=255 Identities=17% Similarity=0.143 Sum_probs=196.5
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC-----hhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD-----PTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
....|.+++.||+|+||.||+|+. .+|+.||||++....... ...+.+|+.+++.++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 456788999999999999999995 468999999997533211 34788999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+.+ +|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 88 ~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 999999975 89888854 3457899999999999999999999999 99999999999999999999999999986543
Q ss_pred C----CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchh-------hhhcc-----
Q 010529 222 G----KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN-------LLMDS----- 284 (508)
Q Consensus 222 ~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-------~~~~~----- 284 (508)
. ....+|+.|+|||++.+. .++.++|||||||++|+|++|..|+.............. ..+..
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 2 345689999999998754 578899999999999999999877654321100000000 00000
Q ss_pred --c---cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 285 --H---LEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 285 --~---~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
. .....+ ...+..+.+|+.+||..||.+|||+.++++|-+-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f 295 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence 0 000011 2335789999999999999999999999988554
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=352.82 Aligned_cols=253 Identities=17% Similarity=0.220 Sum_probs=204.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE----cCCCEEEEEEecCCC----CCChhHHHHHHHHhccC-CCCCCcceeeeeeeC
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL----ENRQWIAVKKFTKVA----WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAG 138 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 138 (508)
...+|.+++.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++.+ .||||+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 345789999999999999999996 368999999986532 12346688899999999 799999999999999
Q ss_pred CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
...+|||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred ceEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999964 356999999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC-----CccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC
Q 010529 219 SMDG-----KSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS 291 (508)
Q Consensus 219 ~~~~-----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
.... ....||+.|+|||++.+ ..++.++|||||||++|+|+||+.|+...............+.. .....+
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~ 286 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYP 286 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCC
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCC
Confidence 5332 23568999999999985 34788999999999999999999887532111000000111111 112334
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-----ChHHHHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERP-----STKNLVVTLAR 325 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rp-----s~~~il~~L~~ 325 (508)
...+..+.+|+.+||..||.+|| |+.+++++..-
T Consensus 287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 45667899999999999999999 99999988644
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=347.39 Aligned_cols=253 Identities=17% Similarity=0.176 Sum_probs=190.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-CCCCcceeeeee--------eCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RKRLANLIGYCC--------AGD 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~--------~~~ 139 (508)
..|++.+.||+|+||.||+|+. .+++.||||++..........+.+|+.++.++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 3678999999999999999995 468899999986554444567899999999995 999999999984 234
Q ss_pred cceeeeecCCCCCHHHHhhcc-CCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHW-EKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
..++||||+. |+|.+++... ....+++..++.|+.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||++.
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 5799999995 7898888542 3457999999999999999999999986 59999999999999999999999999997
Q ss_pred ccCCCC----------------ccccCCCCCCcccc---ccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch
Q 010529 218 NSMDGK----------------SYSTNLAYTPPEYL---KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL 278 (508)
Q Consensus 218 ~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 278 (508)
...... ...+|+.|+|||++ .+..++.++||||||+++|+|+||+.|+.....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------- 258 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-------- 258 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--------
Confidence 654321 33588999999998 466788999999999999999999988643211
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCC
Q 010529 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSD 331 (508)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 331 (508)
..+.............+..+.+|+.+||..||.+|||+.+++++|+.+.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 259 LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred HHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 11111111112222334558899999999999999999999999999876543
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=342.36 Aligned_cols=247 Identities=19% Similarity=0.229 Sum_probs=197.9
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
..|++++.||+|+||.||+|... ++..||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 45788999999999999999965 58899999998766666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc----CCCCc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS----MDGKS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~----~~~~~ 224 (508)
++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99999998864 3456999999999999999999999999 999999999999999999999999987532 12234
Q ss_pred cccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc-cCCCCCHHHHHHH
Q 010529 225 YSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH-LEGKFSSEEATQV 298 (508)
Q Consensus 225 ~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 298 (508)
..||+.|+|||++. +..++.++||||||+++|+|++|..|+........ ...+.... .....+...+..+
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----LLKIAKSDPPTLLTPSKWSVEF 252 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSSGGGSCHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----HHHHhccCCcccCCccccCHHH
Confidence 56889999999983 56788999999999999999999987653211100 00111110 0111234456789
Q ss_pred HHHHHHhcccCCCCCCChHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.+|+.+||..||.+|||+.++++|
T Consensus 253 ~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHcccChhhCCCHHHHhcC
Confidence 999999999999999999999875
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=346.32 Aligned_cols=252 Identities=17% Similarity=0.231 Sum_probs=201.9
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhcc--CCCCCCcceeeeeeeCC----cceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGK--LRRKRLANLIGYCCAGD----ERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~~~~~~~~~~----~~~lv 144 (508)
.|.+.+.||+|+||.||+|+. +++.||||++... ....+.+|++++.. ++||||+++++++.... ..++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 568889999999999999998 5788999999643 34678889999887 79999999999998765 78999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHH--------hCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN--------TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH--------~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
|||+++++|.+++.. ..+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999999953 46999999999999999999999 788 999999999999999999999999998
Q ss_pred cccCCC--------CccccCCCCCCccccccC------CcCccccchhhHHHHHHHHhC----------CCCCCchhhhh
Q 010529 217 KNSMDG--------KSYSTNLAYTPPEYLKNG------RVIPESVIYSFGTVLLDLLSG----------KHIPPSHALDM 272 (508)
Q Consensus 217 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg----------~~~~~~~~~~~ 272 (508)
...... ....||+.|+|||++.+. .++.++||||||+++|+|+|| ..|+.......
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 755432 234688999999999765 344789999999999999999 54543221000
Q ss_pred hhccchh-hhhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 273 IRGENLN-LLMDSHLEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 273 ~~~~~~~-~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.....+. .+.........+ ...+..+.+|+.+||..||.+|||+.+++++|+.+....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 0000011 111222222222 356788999999999999999999999999999997654
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=339.68 Aligned_cols=250 Identities=15% Similarity=0.184 Sum_probs=201.2
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
....|.+++.||.|+||.||+|... +|+.||||.+.... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3456889999999999999999964 58999999997543 45789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 105 YCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp CCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence 9999999999853 3457999999999999999999999999 999999999999999999999999998755432
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc-cccCCCCCHHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD-SHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 301 (508)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.|+........ ...+.. .......+...+..+.+|
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l 258 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA----IFMIPTNPPPTFRKPELWSDNFTDF 258 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHhcCCCcccCCcccCCHHHHHH
Confidence 334678899999999988899999999999999999999987653211000 000000 000111233346789999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.+||..||.+|||+.+++++-+-
T Consensus 259 i~~~l~~dp~~Rpt~~~ll~~~~~ 282 (314)
T 3com_A 259 VKQCLVKSPEQRATATQLLQHPFV 282 (314)
T ss_dssp HHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred HHHHccCChhhCcCHHHHHhCHHH
Confidence 999999999999999999987544
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=337.95 Aligned_cols=257 Identities=14% Similarity=0.146 Sum_probs=205.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeee-eeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-CAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~-~~~~~~~lv~E~ 147 (508)
++|.+++.||+|+||.||+|+. .+++.||||++.... ....+.+|+.+++.++|++++..+.++ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 5688999999999999999995 678999999986544 335799999999999988877766665 456678999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 8999999964 3457999999999999999999999999 9999999999999 48889999999998754432
Q ss_pred ---------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC---C
Q 010529 223 ---------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---F 290 (508)
Q Consensus 223 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 290 (508)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||...... ........+........ .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch-hhhhhhhhhcccccCCchHHH
Confidence 3446899999999999989999999999999999999999886542100 00011111111111100 1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
....++.+.+|+.+||+.||.+|||+.++++.|+.+......
T Consensus 243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 123457799999999999999999999999999998765544
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=339.32 Aligned_cols=254 Identities=17% Similarity=0.195 Sum_probs=204.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee--CCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~ 142 (508)
..++|++++.||.|+||.||+|... +++.||+|++...... ..+.+.+|+.++++++||||+++++++.. ....+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 3567889999999999999999964 6899999999754432 24568999999999999999999998854 56789
Q ss_pred eeeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCCC----ceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 143 LVAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEGR----PLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~~----iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+.+. ++||||||+|||++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999999642 23459999999999999999999999763 999999999999999999999999998
Q ss_pred cccCCCC----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH
Q 010529 217 KNSMDGK----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292 (508)
Q Consensus 217 ~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
....... ...+|+.|+|||++.+..++.++||||||+++|+|+||+.|+....... ....+........+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~ 238 (279)
T 2w5a_A 164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-----LAGKIREGKFRRIPY 238 (279)
T ss_dssp HHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHHTCCCCCCT
T ss_pred eeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH-----HHHHHhhcccccCCc
Confidence 7655432 3468999999999998889999999999999999999998765432111 111111111223344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
..+..+.+++.+||..||.+|||+.+++++++..
T Consensus 239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 5677899999999999999999999999877544
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=374.43 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=199.6
Q ss_pred cCCCCcccEEEEEEEc---CCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 77 ESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.||+|+||.||+|.+. +++.||||+++..... ..+.|.+|+.+|++++|||||+++++|. .+..+||||||++|
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELG 454 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCC
Confidence 6899999999999753 4678999999764322 2468999999999999999999999995 45688999999999
Q ss_pred CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-------c
Q 010529 152 TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK-------S 224 (508)
Q Consensus 152 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~-------~ 224 (508)
+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 455 ~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 9999996 3457999999999999999999999999 9999999999999999999999999997654332 2
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.|+..... ..+...+........+..++.++.+||.
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 235678999999998899999999999999999999 8877654321 1122222222333445567788999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHhh
Q 010529 304 QCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+||..||++|||+.+|++.|+.+.
T Consensus 607 ~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999999998864
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=345.52 Aligned_cols=246 Identities=13% Similarity=0.106 Sum_probs=202.0
Q ss_pred CCcccccccCCCCcccEEEEEE------EcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC---CCCCcceeeeeeeCC
Q 010529 69 FSSDNIVSESGEKAANVVYKGR------LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR---RKRLANLIGYCCAGD 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~~ 139 (508)
-..|.+.+.||+|+||.||+|+ ..+++.||||++... ....+..|+.++..++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3567888999999999999994 456888999999654 3567888888888886 999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhcc---CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-----------C
Q 010529 140 ERLLVAEYMPNDTLAKHLFHW---EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-----------D 205 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-----------~ 205 (508)
..+||||||+||+|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++. +
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------C
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCcccccccc
Confidence 999999999999999999642 3457999999999999999999999999 999999999999988 8
Q ss_pred CCeEEcccCCccccC---CC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchh
Q 010529 206 GDPRLSCFGLMKNSM---DG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN 279 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~---~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~ 279 (508)
+.+||+|||+++... .. ....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------- 292 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------- 292 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------
Confidence 999999999996432 21 34568999999999999889999999999999999999998865332110
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhcccCCCCC-CChHHHHHHHHHhhc
Q 010529 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRER-PSTKNLVVTLARLQT 328 (508)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R-ps~~~il~~L~~~~~ 328 (508)
......... .+ .++.+.+++..||..+|.+| |++.++.+.|+.+..
T Consensus 293 ~~~~~~~~~-~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 CKPEGLFRR-LP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp EEECSCCTT-CS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred eeechhccc-cC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 011111111 11 25567889999999999999 688888888888764
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=337.02 Aligned_cols=248 Identities=18% Similarity=0.207 Sum_probs=197.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee----CCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~ 142 (508)
..|.+.+.||+|+||.||+|.. .++..||+|++...... ..+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3467788899999999999995 55888999998754322 24578999999999999999999999865 35589
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeC-CCCCeEEcccCCccccC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~~ 220 (508)
+||||+++++|.+++.. ...+++..++.|+.||+.||.|||+.+ +++||||||+|||++ .++.+||+|||++....
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999963 356899999999999999999999986 599999999999997 78999999999997655
Q ss_pred CC--CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 221 DG--KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 221 ~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.. ....||+.|+|||++. +.++.++||||||+++|+|++|+.|+........ ....+.........+...++.+
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 259 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEV 259 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHH
T ss_pred ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH---HHHHHhccCCccccCCCCCHHH
Confidence 44 2346899999999886 4689999999999999999999988654211000 0011111111111122234679
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+|+.+||..||.+|||+.++++|-
T Consensus 260 ~~li~~~l~~dp~~Rps~~ell~h~ 284 (290)
T 1t4h_A 260 KEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHccCChhhCCCHHHHhhCc
Confidence 9999999999999999999999763
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=340.76 Aligned_cols=255 Identities=17% Similarity=0.251 Sum_probs=185.6
Q ss_pred cCCCcccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
-..++|.+++.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 345778999999999999999999 4568899999986543 22356789999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhcc------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccc
Q 010529 145 AEYMPNDTLAKHLFHW------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKN 218 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~ 218 (508)
|||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999998631 2456999999999999999999999999 99999999999999999999999999865
Q ss_pred cCCC---------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh----ccchhhhhcc
Q 010529 219 SMDG---------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR----GENLNLLMDS 284 (508)
Q Consensus 219 ~~~~---------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~----~~~~~~~~~~ 284 (508)
.... ....||+.|+|||++.+ ..++.++||||||+++|+|+||+.|+......... ..........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 250 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc
Confidence 4332 23468999999999875 56889999999999999999999886542111000 0000000000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..........+..+.+|+.+||..||.+|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00111122345679999999999999999999999986
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=334.89 Aligned_cols=249 Identities=17% Similarity=0.144 Sum_probs=206.7
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
..+|.+.+.||+|+||.||+|... +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888999999999999999965 58889999987543222 45788999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999998863 357999999999999999999999999 999999999999999999999999998765422
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....+|+.|+|||++.+..++.++||||||+++|+|+||+.|+........ ...+... ....+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~ 244 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKN--EYSIPKHINPVAAS 244 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTT--CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhhc--cCCCccccCHHHHH
Confidence 334689999999999888899999999999999999999988654321110 1111111 11233445677999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
++.+||..||.+|||+.+++++-.-.
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~~~~~ 270 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLNDEFFT 270 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred HHHHHcccChhhCcCHHHHhhChhee
Confidence 99999999999999999999986543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=339.75 Aligned_cols=254 Identities=20% Similarity=0.242 Sum_probs=196.3
Q ss_pred CCcccccccCCCCcccEEEEEEEc--CCC--EEEEEEecCCCCC---ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE--NRQ--WIAVKKFTKVAWP---DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
..+|++++.||+|+||.||+|++. ++. .||||++...... ..+.+.+|+.+++.++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 356889999999999999999853 233 6899998754322 2457899999999999999999999997654 8
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++.....
T Consensus 96 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999964 3456999999999999999999999999 99999999999999999999999999876644
Q ss_pred CC-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 222 GK-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 222 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
.. ...+|..|+|||++.+..++.++||||||+++|+|++ |+.|+....... ....+.........+..
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~ 249 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPED 249 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTT
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH----HHHHHHccCCCCCCCcC
Confidence 32 2345678999999988889999999999999999999 887764321111 11111111122223445
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+..+.+++.+||..||.+|||+.++++.|..+...
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 677899999999999999999999999999988643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=344.20 Aligned_cols=255 Identities=20% Similarity=0.216 Sum_probs=199.2
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeC------
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAG------ 138 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------ 138 (508)
..++|++++.||+|+||.||+|+. .+++.||||++...... ....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 456889999999999999999996 56899999998654432 245788999999999999999999999763
Q ss_pred --CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 139 --DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 139 --~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
+..++||||+. ++|.+.+.. ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 46899999997 477777754 3456999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC--------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-------cchhh
Q 010529 217 KNSMDG--------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-------ENLNL 280 (508)
Q Consensus 217 ~~~~~~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------~~~~~ 280 (508)
...... ....||+.|+|||++.+ ..++.++||||||+++|+|+||+.|+.......... .....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 754321 23457899999999876 457999999999999999999998776432111000 00000
Q ss_pred hhccc-----------cCC-CCC--H-----HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 281 LMDSH-----------LEG-KFS--S-----EEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 281 ~~~~~-----------~~~-~~~--~-----~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
.+... ... ... . ..++.+.+|+.+||..||.+|||+.++++|-+-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 315 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence 00000 000 000 0 014568899999999999999999999998544
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=372.57 Aligned_cols=246 Identities=19% Similarity=0.240 Sum_probs=207.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
..++|++++.||+|+||.||+|+. .+++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 567899999999999999999995 45889999999743 223456788999999988 7999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC-
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD- 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~- 221 (508)
|||||++||+|.+++.. ...+++..+..|+.||+.||.|||+.+ ||||||||+||||+.+|.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999974 357999999999999999999999999 99999999999999999999999999985332
Q ss_pred ---CCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 222 ---GKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 222 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....++... ..++...+.++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~----~~~~i~~~~--~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQSIMEHN--VAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHSSC--CCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH----HHHHHHhCC--CCCCccCCHHH
Confidence 235678999999999999999999999999999999999998876432111 111222211 23455667889
Q ss_pred HHHHHHhcccCCCCCCCh-----HHHHHH
Q 010529 299 VGLASQCLQYEPRERPST-----KNLVVT 322 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~-----~~il~~ 322 (508)
.+|+.+||..||.+||++ .+|++|
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999998 777766
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=338.30 Aligned_cols=257 Identities=14% Similarity=0.146 Sum_probs=202.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeee-eeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC-CAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~-~~~~~~~lv~E~ 147 (508)
+.|.+++.||+|+||.||+|+. .+++.||||++.... ....+.+|+.+++.++|++++..++++ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 4578899999999999999995 668899999876543 234689999999999988877777666 556778999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9 8999999864 3557999999999999999999999999 9999999999999 78899999999999754432
Q ss_pred ---------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC---C
Q 010529 223 ---------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---F 290 (508)
Q Consensus 223 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 290 (508)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ........+........ .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSCHHHH
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh-hhhhhhhhhhcccccchhhhh
Confidence 2446889999999999989999999999999999999999887542110 00011111111111110 0
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCCCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 332 (508)
....++.+.+|+.+||+.||.+|||+.++++.|+.+......
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 122357799999999999999999999999999998765443
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=345.49 Aligned_cols=251 Identities=18% Similarity=0.209 Sum_probs=199.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeee------CC
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCA------GD 139 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~------~~ 139 (508)
....|++++.||.|+||.||+|+. .+++.||||++.... .....+.+|+.+++++ +||||+++++++.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 456688999999999999999996 568899999997543 3457899999999999 89999999999976 45
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++...
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 7899999999999999997655567999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC
Q 010529 220 MDG----KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290 (508)
Q Consensus 220 ~~~----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
... ....||+.|+|||++. +..++.++||||||+++|+|+||..|+....... ....+.........
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~ 255 (326)
T 2x7f_A 180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLIPRNPAPRLK 255 (326)
T ss_dssp -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSCCCCCS
T ss_pred CcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH----HHHHhhcCccccCC
Confidence 432 3456899999999986 4668899999999999999999998764321100 01111111111111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
....+..+.+|+.+||..||.+|||+.+++++-.
T Consensus 256 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred ccccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 2334677999999999999999999999998744
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=358.00 Aligned_cols=240 Identities=14% Similarity=0.103 Sum_probs=189.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHHHH---HHhccCCCCCCccee-------eee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKEEA---EGVGKLRRKRLANLI-------GYC 135 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~h~nIv~~~-------~~~ 135 (508)
..|.+.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+ .+++.++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 5578889999999999999994 669999999997432 22346789999 555566899999998 555
Q ss_pred eeCC-----------------cceeeeecCCCCCHHHHhhccC-----CCCcChHHHHHHHHHHHHHHHHHHhCCCceee
Q 010529 136 CAGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193 (508)
Q Consensus 136 ~~~~-----------------~~~lv~E~~~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~ 193 (508)
...+ ..||||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+++ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 4443 278999999 689999996421 123445888899999999999999999 9999
Q ss_pred cCCCcceeeCCCCCeEEcccCCccccCCC-CccccCCCCCCccccccC-----------CcCccccchhhHHHHHHHHhC
Q 010529 194 DLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNG-----------RVIPESVIYSFGTVLLDLLSG 261 (508)
Q Consensus 194 Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~vl~elltg 261 (508)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865443 33456 999999999877 799999999999999999999
Q ss_pred CCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 262 KHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.||..... ......+... ....++.+.+|+.+||..||.+|||+.+++++
T Consensus 310 ~~Pf~~~~~----~~~~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAA----LGGSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC----------CCSGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccc----ccchhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 988654321 1111111111 12345679999999999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=333.39 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=198.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
...+|.+.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467889999999999999999965 6899999998643 22345679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 89 VMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999999964 346899999999999999999999999 999999999999999999999999998866543
Q ss_pred --CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....+++.|+|||++.+..+ +.++||||||+++|+|++|+.|+........ ...+... ....+...+..+.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~~l~ 239 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL----FKKIRGG--VFYIPEYLNRSVA 239 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHH
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH----HHHhhcC--cccCchhcCHHHH
Confidence 23467899999999987665 6799999999999999999988654321111 0111111 1112334567799
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+++.+||+.||.+|||+.+++++-+
T Consensus 240 ~li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 240 TLLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHccCChhhCCCHHHHHhChh
Confidence 9999999999999999999999844
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=338.50 Aligned_cols=251 Identities=20% Similarity=0.218 Sum_probs=189.6
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.++|++++.||+|+||.||+|+. .+++.||||++....... .+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45788999999999999999995 578899999997543221 223445555688889999999999999999999999
Q ss_pred ecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 146 EYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
||++ ++|.+++... ....+++..++.|+.||+.||.|||++ + ++||||||+|||++.++.+||+|||++......
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 9997 5888877532 456799999999999999999999998 8 999999999999999999999999998765443
Q ss_pred ---CccccCCCCCCcccc----ccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 223 ---KSYSTNLAYTPPEYL----KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
....||+.|+|||++ .+..++.++||||||+++|+|+||+.|+....... ...................+
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 240 (290)
T 3fme_A 164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVVEEPSPQLPADKFS 240 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHHHHHSCCCCCCTTTSC
T ss_pred ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH---HHHHHHhccCCCCcccccCC
Confidence 234689999999996 45678899999999999999999998865321110 11111222222222223456
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 241 ~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 241 AEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 78999999999999999999999998744
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=344.35 Aligned_cols=250 Identities=16% Similarity=0.130 Sum_probs=201.3
Q ss_pred cccc-ccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC--ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeee
Q 010529 72 DNIV-SESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 72 ~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
|.+. +.||+|+||.||+|... +++.||||++...... ....+.+|+.++..+ .||||+++++++...+..++|||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e 109 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence 4555 77999999999999954 5899999999754322 356799999999999 57999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccccCCC-
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~~~~- 222 (508)
|+.+++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++......
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 999999999986545578999999999999999999999999 999999999999987 789999999999866543
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+..++.++||||||+++|+|++|+.|+........... +... ............+..+.+
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-i~~~-~~~~~~~~~~~~~~~~~~ 266 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN-ISQV-NVDYSEETFSSVSQLATD 266 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHT-CCCCCTTTTTTSCHHHHH
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-HHhc-ccccCchhhcccCHHHHH
Confidence 345689999999999988999999999999999999999988754321111000 0000 011111223345677999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
|+.+||..||.+|||+.+++++-+
T Consensus 267 li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 267 FIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred HHHHHcCCChhhCcCHHHHhCCHh
Confidence 999999999999999999998743
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=334.42 Aligned_cols=248 Identities=16% Similarity=0.191 Sum_probs=202.3
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.|.+++.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++......++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 4788899999999999999965 6889999998754322 25679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC----CeEEcccCCcccc
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG----DPRLSCFGLMKNS 219 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~Dfg~a~~~ 219 (508)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999963 456999999999999999999999999 99999999999998877 7999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----H
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS----S 292 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 292 (508)
... ....+++.|+|||++.+..++.++||||||+++|+|++|..|+........ ...+... ....+ .
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~ 236 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET----LTNISAV--NYDFDEEYFS 236 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTT--CCCCCHHHHT
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH----HHHhHhc--ccCCcchhcc
Confidence 443 234588999999999888899999999999999999999988654321110 0011000 01111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHhh
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVT--LARLQ 327 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~~ 327 (508)
..+..+.+|+.+||..||.+|||+.+++++ +..+.
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 237 NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 235678999999999999999999999987 44443
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=344.41 Aligned_cols=246 Identities=20% Similarity=0.216 Sum_probs=200.3
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--------hhHHHHHHHHhccC-CCCCCcceeeeeeeCC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--------PTQFKEEAEGVGKL-RRKRLANLIGYCCAGD 139 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 139 (508)
..|.+.+.||.|+||.||+|+.. +|+.||||++....... .+.+.+|+.+++++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45788899999999999999975 69999999987654221 34678999999999 8999999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.| ++|+||||+|||++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999963 457999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC---CccccCCCCCCcccccc------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC
Q 010529 220 MDG---KSYSTNLAYTPPEYLKN------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF 290 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
... ....||+.|+|||++.+ ..++.++||||||+++|+|+||..||........ ...+.........
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM----LRMIMEGQYQFSS 326 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCC
Confidence 543 34568999999999863 3578899999999999999999988754311100 0111111110000
Q ss_pred C--HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 291 S--SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 291 ~--~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+ ...+..+.+|+.+||..||.+|||+.+++++
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 1235679999999999999999999999986
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=335.38 Aligned_cols=250 Identities=17% Similarity=0.157 Sum_probs=200.5
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC----CCChhHHHHHHHHhccCCCCCCcceeeeee--eCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA----WPDPTQFKEEAEGVGKLRRKRLANLIGYCC--AGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~--~~~~~ 141 (508)
..+|.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46789999999999999999995 568899999996532 233567999999999999999999999984 44578
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||||+.++ |.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999999866 777776656678999999999999999999999999 99999999999999999999999999876543
Q ss_pred C------CccccCCCCCCccccccCC--cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 222 G------KSYSTNLAYTPPEYLKNGR--VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 222 ~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
. ....||+.|+|||++.+.. ++.++||||||+++|+|++|+.|+........ ...+... ....+..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~i~~~--~~~~~~~ 235 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL----FENIGKG--SYAIPGD 235 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHC--CCCCCSS
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH----HHHHhcC--CCCCCCc
Confidence 2 2345789999999987643 37799999999999999999988654321111 0111111 1123334
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+..+.+|+.+||..||.+|||+.+++++-+-.
T Consensus 236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 268 (305)
T 2wtk_C 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268 (305)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence 567799999999999999999999999986544
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=356.32 Aligned_cols=255 Identities=15% Similarity=0.164 Sum_probs=203.5
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCC-CCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR-KRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
..|.+++.||+|+||.||+|+. .+++.||||++.... ...++..|+++++.+.| ++|+.+..++......+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 4688999999999999999995 668999999886544 23568999999999976 5566666677778888999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee---CCCCCeEEcccCCccccCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF---DEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++.....
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8999999964 3567999999999999999999999999 9999999999999 58899999999999755432
Q ss_pred ---------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCC---C
Q 010529 223 ---------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---F 290 (508)
Q Consensus 223 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 290 (508)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..+........ .
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-KKQKYEKISEKKVATSIEAL 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-HHHHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh-HHHHHHHHhhccccccHHHH
Confidence 24568999999999999999999999999999999999998875421100 0000111111100000 0
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
...++.++.+|+.+||..+|.+||++.+|++.|+.+....
T Consensus 241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1123567999999999999999999999999999886544
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=352.85 Aligned_cols=250 Identities=16% Similarity=0.190 Sum_probs=194.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~ 141 (508)
+.|.+++.||+|+||.||+|+. .+++.||||++...... ..+++.+|+.+|+.++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 5688999999999999999995 45888999999754322 245789999999999999999999999766 568
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999996 69999996 4567999999999999999999999999 99999999999999999999999999986543
Q ss_pred C--------------------------CccccCCCCCCcccc-ccCCcCccccchhhHHHHHHHHhCCCCCCchh---hh
Q 010529 222 G--------------------------KSYSTNLAYTPPEYL-KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHA---LD 271 (508)
Q Consensus 222 ~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~---~~ 271 (508)
. ....||+.|+|||++ .+..++.++|||||||++|||++|..|+.... ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 345789999999986 45678999999999999999998644332110 00
Q ss_pred hhhcc--------------------------------------------chhhhhcccc-CCCCC-----HHHHHHHHHH
Q 010529 272 MIRGE--------------------------------------------NLNLLMDSHL-EGKFS-----SEEATQVVGL 301 (508)
Q Consensus 272 ~~~~~--------------------------------------------~~~~~~~~~~-~~~~~-----~~~~~~l~~l 301 (508)
.+.+. .....+.... ....+ ...++.+.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 00000 0000000000 00000 2246788999
Q ss_pred HHHhcccCCCCCCChHHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.+||..||.+|||+.++++|-
T Consensus 342 l~~mL~~dP~~R~ta~e~L~Hp 363 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDHP 363 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTCG
T ss_pred HHHHhcCCcccCCCHHHHhcCh
Confidence 9999999999999999999883
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=340.68 Aligned_cols=254 Identities=19% Similarity=0.249 Sum_probs=199.4
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
.+++|.+.+.||+|+||.||+|...+ .||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 56788999999999999999999754 399999875432 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC----
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD---- 221 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~---- 221 (508)
||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++ ++.+||+|||++.....
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999964 3446999999999999999999999999 99999999999998 67999999999765421
Q ss_pred -----CCccccCCCCCCcccccc---------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC
Q 010529 222 -----GKSYSTNLAYTPPEYLKN---------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 222 -----~~~~~~t~~y~aPE~~~~---------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
.....||+.|+|||++.+ ..++.++||||||+++|+|+||+.|+......... ..+......
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~ 261 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII----WQMGTGMKP 261 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH----HHHHTTCCC
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHhccCCCC
Confidence 123357889999999864 34788999999999999999999886543211111 011111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
.......+..+.+|+.+||..||.+|||+.++++.|+.+....
T Consensus 262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111234566899999999999999999999999999887543
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=356.99 Aligned_cols=253 Identities=18% Similarity=0.198 Sum_probs=200.8
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC------CCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL------RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~~~~~~~~~~~~~ 142 (508)
.+|++++.||+|+||.||+|.. .+++.||||++.... .....+.+|+.+++.+ .|+||+++++++......+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 3588999999999999999995 458899999996432 1235677888888776 5779999999999999999
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC--eEEcccCCccccC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD--PRLSCFGLMKNSM 220 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~--~kl~Dfg~a~~~~ 220 (508)
+||||+. ++|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++....
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 9999996 68999997655567999999999999999999999999 999999999999999887 9999999997654
Q ss_pred CC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------cc----------chhhhh
Q 010529 221 DG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GE----------NLNLLM 282 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~----------~~~~~~ 282 (508)
.. ....||+.|+|||++.+..++.++|||||||++|||+||..||......... +. .....+
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~ 333 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFV 333 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHB
T ss_pred CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhcc
Confidence 43 4557899999999999989999999999999999999999877543211000 00 000000
Q ss_pred ccc---------------------------cC-C--------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 283 DSH---------------------------LE-G--------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 283 ~~~---------------------------~~-~--------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+.. .. . .+....++.+.+|+.+||..||.+|||+.++++|-+-
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~ 412 (429)
T 3kvw_A 334 SSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412 (429)
T ss_dssp CTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTT
T ss_pred CCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhh
Confidence 000 00 0 0001125678999999999999999999999988543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=352.90 Aligned_cols=250 Identities=14% Similarity=0.040 Sum_probs=183.7
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccC--CCCCCccee-------eeeee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKL--RRKRLANLI-------GYCCA 137 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l--~h~nIv~~~-------~~~~~ 137 (508)
.|.+++.||+|+||.||+|+. .+++.||||++....... .+.+.+|+.+++.| +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 478889999999999999995 468899999998754322 34577785444444 799988755 34433
Q ss_pred C-----------------CcceeeeecCCCCCHHHHhhccCCCCcChHHH------HHHHHHHHHHHHHHHhCCCceeec
Q 010529 138 G-----------------DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLR------LRVAFYIAEALDYCNTEGRPLYHD 194 (508)
Q Consensus 138 ~-----------------~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~------~~i~~~i~~~L~~lH~~~~iiH~D 194 (508)
. ...||||||++ ++|.+++... ...+++..+ +.++.||+.||.|||+++ |+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCc
Confidence 2 23799999998 8999999753 334566666 788899999999999999 99999
Q ss_pred CCCcceeeCCCCCeEEcccCCccccCCCC-ccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCCCCchhhh
Q 010529 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGK-SYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHIPPSHALD 271 (508)
Q Consensus 195 ikp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~ 271 (508)
|||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999998766554 5567899999999987 67899999999999999999999887654211
Q ss_pred hhhccc---hhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 272 MIRGEN---LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 272 ~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
...... .................++.+.+|+.+||..||.+|||+.++++|-
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 111000 0000011111111234567899999999999999999999999873
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=345.93 Aligned_cols=250 Identities=18% Similarity=0.225 Sum_probs=203.3
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCCh-----------------hHHHHHHHHhccCCCCCCcce
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDP-----------------TQFKEEAEGVGKLRRKRLANL 131 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------~~~~~E~~~l~~l~h~nIv~~ 131 (508)
..+|.+++.||+|+||.||+|.. +++.||||++........ +.+.+|+.+++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46789999999999999999999 889999999865322111 789999999999999999999
Q ss_pred eeeeeeCCcceeeeecCCCCCHHHH------hhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCC
Q 010529 132 IGYCCAGDERLLVAEYMPNDTLAKH------LFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 132 ~~~~~~~~~~~lv~E~~~~~sL~~~------l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~ 204 (508)
++++.+.+..++||||+++++|.++ +.......+++..++.++.||+.||.|||+ .+ ++||||||+|||++.
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcC
Confidence 9999999999999999999999998 654336789999999999999999999999 88 999999999999999
Q ss_pred CCCeEEcccCCccccCCC--CccccCCCCCCccccccC-CcCc-cccchhhHHHHHHHHhCCCCCCchhhhhhhccchhh
Q 010529 205 DGDPRLSCFGLMKNSMDG--KSYSTNLAYTPPEYLKNG-RVIP-ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNL 280 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~ 280 (508)
++.+||+|||++...... ....+|+.|+|||++.+. .++. ++||||||+++|+|++|..|+....... .....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~ 264 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV---ELFNN 264 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH---HHHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHH
Confidence 999999999999865433 345688999999999876 6666 9999999999999999998875432100 00000
Q ss_pred hhccccCC-----------------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 281 LMDSHLEG-----------------KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 281 ~~~~~~~~-----------------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+....... ......+..+.+|+.+||..||.+|||+.++++|-
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 00000000 00134567899999999999999999999999863
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=348.24 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=182.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeC------Cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~ 140 (508)
..|++++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5688999999999999999994 56889999999654322 245788999999999999999999998654 45
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.++|||++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 789999884 367999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccc------------hh
Q 010529 221 DG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GEN------------LN 279 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~------------~~ 279 (508)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....... +.. ..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 43 45678999999999876 67899999999999999999999887653211000 000 00
Q ss_pred hhhccccC-CCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 280 LLMDSHLE-GKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 280 ~~~~~~~~-~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
..+..... ...+ ...++.+.+|+.+||..||.+|||+.++++|-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 00000000 0001 12356789999999999999999999999874
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-43 Score=348.09 Aligned_cols=253 Identities=19% Similarity=0.236 Sum_probs=196.6
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC---------
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG--------- 138 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--------- 138 (508)
-..|.+++.||+|+||.||+|+. .+++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 34688999999999999999995 678999999986443 2345899999999999999999998543
Q ss_pred -----------------------------CcceeeeecCCCCCHHHHhhc--cCCCCcChHHHHHHHHHHHHHHHHHHhC
Q 010529 139 -----------------------------DERLLVAEYMPNDTLAKHLFH--WEKQTIEWPLRLRVAFYIAEALDYCNTE 187 (508)
Q Consensus 139 -----------------------------~~~~lv~E~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 187 (508)
...++||||++ ++|.+.+.. .....+++..+..++.||+.||.|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 33789999997 588777753 2456799999999999999999999999
Q ss_pred CCceeecCCCcceeeC-CCCCeEEcccCCccccCCC---CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCC
Q 010529 188 GRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGK 262 (508)
Q Consensus 188 ~~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~ 262 (508)
+ |+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 161 g-i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 239 (383)
T 3eb0_A 161 G-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239 (383)
T ss_dssp T-EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred c-CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence 9 99999999999997 6889999999999865433 345689999999998764 4899999999999999999999
Q ss_pred CCCCchhhhhhhcc--------chhhh---------------hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHH
Q 010529 263 HIPPSHALDMIRGE--------NLNLL---------------MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319 (508)
Q Consensus 263 ~~~~~~~~~~~~~~--------~~~~~---------------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~i 319 (508)
.||........... ....+ ....+...++...+..+.+|+.+||..||.+|||+.++
T Consensus 240 ~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319 (383)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 88765321110000 00000 00000011223356779999999999999999999999
Q ss_pred HHH--HHHhh
Q 010529 320 VVT--LARLQ 327 (508)
Q Consensus 320 l~~--L~~~~ 327 (508)
++| +..+.
T Consensus 320 l~hp~f~~~~ 329 (383)
T 3eb0_A 320 MAHPFFDHLR 329 (383)
T ss_dssp HTSGGGHHHH
T ss_pred hcCHHHHHHH
Confidence 988 44443
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=337.11 Aligned_cols=244 Identities=18% Similarity=0.197 Sum_probs=194.1
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--------CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--------PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DY 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-ce
Confidence 578899999999999999995 4588999999865321 1234689999999999999999999998655 48
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC---eEEcccCCccc
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD---PRLSCFGLMKN 218 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~Dfg~a~~ 218 (508)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999999886 4567999999999999999999999999 999999999999986654 99999999987
Q ss_pred cCCCC---ccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC-
Q 010529 219 SMDGK---SYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS- 291 (508)
Q Consensus 219 ~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (508)
..... ...||+.|+|||++. +..++.++||||||+++|+|++|..|+...... ......+........+
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKYNFIPE 242 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHHHTCCCCCHH
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHHhCccccCch
Confidence 65542 346899999999974 466889999999999999999999886532110 0111111111111111
Q ss_pred --HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 292 --SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 292 --~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...+..+.+|+.+||..||.+|||+.+++++
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1235779999999999999999999999976
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=343.15 Aligned_cols=251 Identities=15% Similarity=0.163 Sum_probs=192.6
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCC------
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD------ 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 139 (508)
...|.+++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788999999999999999995 46889999999754322 2356889999999999999999999997654
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 6799999997 57888874 35899999999999999999999999 999999999999999999999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc--------------------
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-------------------- 276 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-------------------- 276 (508)
... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 443 345789999999999988899999999999999999999988764321100000
Q ss_pred -------------chhhhhccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 277 -------------NLNLLMDSHLEGKF---SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 277 -------------~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
...........+.. ....+..+.+|+.+||..||.+|||+.++++|-+-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 322 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence 00000000000000 12336789999999999999999999999998554
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=332.57 Aligned_cols=250 Identities=17% Similarity=0.168 Sum_probs=203.5
Q ss_pred cCCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---------hhHHHHHHHHhccCC-CCCCcceeeee
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---------PTQFKEEAEGVGKLR-RKRLANLIGYC 135 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~nIv~~~~~~ 135 (508)
.-+..|.+++.||+|+||.||+|... +++.||||++....... .+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34678899999999999999999964 68899999997543211 346889999999995 99999999999
Q ss_pred eeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 136 ~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
......++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999964 457999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccc------cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc
Q 010529 216 MKNSMDG---KSYSTNLAYTPPEYLK------NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL 286 (508)
Q Consensus 216 a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (508)
+...... ....+++.|+|||++. ...++.++||||||+++|+|++|..|+........ ...+.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~ 246 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM----LRMIMSGNY 246 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCC
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH----HHHHhcCCc
Confidence 8765543 3346789999999985 35678899999999999999999988654321111 111111111
Q ss_pred C--CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 287 E--GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 287 ~--~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
. .......+..+.+|+.+||..||.+|||+.+++++-
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (298)
T 1phk_A 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285 (298)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence 1 111234567899999999999999999999999763
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=368.69 Aligned_cols=252 Identities=18% Similarity=0.239 Sum_probs=203.7
Q ss_pred CCcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
..+|.+.+.||+|+||.||+|.+.. +..||||++....... .+.|.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 4567888999999999999999642 4579999986543222 357999999999999999999999984 567899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 468 v~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 468 IMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp EEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred EEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999999999964 3456999999999999999999999999 9999999999999999999999999998665432
Q ss_pred -----ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 224 -----SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 224 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
...+|+.|+|||++.+..++.++||||||+++|||++ |..|+....... ....+........+..++..
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 620 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-----VIGRIENGERLPMPPNCPPT 620 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHHTCCCCCCTTCCHH
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHcCCCCCCCccccHH
Confidence 2345678999999988899999999999999999997 776654321111 11111111222344556778
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+|+.+||..||.+|||+.++++.|+.+..
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998753
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-43 Score=351.78 Aligned_cols=248 Identities=23% Similarity=0.296 Sum_probs=192.2
Q ss_pred cccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC------Cccee
Q 010529 71 SDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~~~l 143 (508)
.|.+++.||+|+||.||+|+.. +++.||||++.... ..+.+|+++|+.++|||||+++++|... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4788899999999999999964 58999999986432 2345799999999999999999998542 23679
Q ss_pred eeecCCCCCHHHHhhc--cCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-CCeEEcccCCccccC
Q 010529 144 VAEYMPNDTLAKHLFH--WEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-GDPRLSCFGLMKNSM 220 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~Dfg~a~~~~ 220 (508)
||||+++ +|.+.+.. .....+++..+..++.||++||.|||+.+ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999975 67666542 24567999999999999999999999999 9999999999999955 568999999998654
Q ss_pred CC---CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhh-----hh--c-c---chhhhhc--
Q 010529 221 DG---KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDM-----IR--G-E---NLNLLMD-- 283 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~--~-~---~~~~~~~-- 283 (508)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||....... .. + . .+..+..
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 33 345789999999998764 78999999999999999999998876532110 00 0 0 0000000
Q ss_pred -----cccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 284 -----SHLEG-----KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 284 -----~~~~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+.... .++...+.++.+|+.+||..||.+|||+.++++|-+
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~ 339 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence 00000 012234678999999999999999999999998843
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=351.05 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=199.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC--------CCCCcceeeeee----
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR--------RKRLANLIGYCC---- 136 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~~~~~~~---- 136 (508)
.+|.+++.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 5689999999999999999994 568899999996432 22467889999999985 788999999987
Q ss_pred eCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCC---------
Q 010529 137 AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDG--------- 206 (508)
Q Consensus 137 ~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~--------- 206 (508)
.....+|||||+ +++|.+++.......+++..+..|+.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 456789999999 56777777654556799999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------------------CeEEcccCCccccCCC-CccccCCCCCCccccccCCcCcc
Q 010529 207 ----------------------------------------DPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPE 245 (508)
Q Consensus 207 ----------------------------------------~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~ 245 (508)
.+||+|||++...... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 7999999999765443 44578999999999998889999
Q ss_pred ccchhhHHHHHHHHhCCCCCCchhhhhh-------------hccchhhh----------hcc------------------
Q 010529 246 SVIYSFGTVLLDLLSGKHIPPSHALDMI-------------RGENLNLL----------MDS------------------ 284 (508)
Q Consensus 246 ~Dv~slG~vl~elltg~~~~~~~~~~~~-------------~~~~~~~~----------~~~------------------ 284 (508)
+|||||||++|+|+||+.||........ .+.....+ +..
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 9999999999999999988753210000 00000000 000
Q ss_pred -ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 285 -HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 285 -~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......+...+..+.+|+.+||..||.+|||+.++++|
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00012356778899999999999999999999999976
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=339.33 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=181.9
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHH-HhccCCCCCCcceeeeeeeCCcceee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAE-GVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
..++|.+++.||+|+||.||+|.. .+++.||||++...... ...++..|+. +++.++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 356788999999999999999996 46889999999754322 2335666666 77778999999999999999999999
Q ss_pred eecCCCCCHHHHhhc---cCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 145 AEYMPNDTLAKHLFH---WEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~---~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
|||+.+ +|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||++....
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 999974 78777742 2356799999999999999999999998 8 9999999999999999999999999997654
Q ss_pred CC---CccccCCCCCCcccc----ccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhc---cccCCCC
Q 010529 221 DG---KSYSTNLAYTPPEYL----KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMD---SHLEGKF 290 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (508)
.. ....||+.|+|||++ .+..++.++||||||+++|+|++|+.|+....... ........ ..+....
T Consensus 178 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~ 254 (327)
T 3aln_A 178 DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF---DQLTQVVKGDPPQLSNSE 254 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCCCSCCCCCCCCS
T ss_pred cccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH---HHHHHHhcCCCCCCCCcc
Confidence 43 233689999999998 45678999999999999999999998875421100 00111111 1111111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
....+..+.+|+.+||..||.+|||+.+++++-+-
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 289 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHH
Confidence 22356779999999999999999999999988444
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=336.25 Aligned_cols=252 Identities=20% Similarity=0.240 Sum_probs=200.3
Q ss_pred CcccccccCCCCcccEEEEEEE--cCCCEEEEEEecCCCC--CChhHHHHHHHHhccC---CCCCCcceeeeee-----e
Q 010529 70 SSDNIVSESGEKAANVVYKGRL--ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKL---RRKRLANLIGYCC-----A 137 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~~~~~~~-----~ 137 (508)
.+|.+++.||+|+||.||+|+. .+++.||||++..... .....+.+|+.+++.+ .||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 4688999999999999999996 4588899999865332 2234678888888777 8999999999987 4
Q ss_pred CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
....++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999997 69999997655566999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch-----------h----
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL-----------N---- 279 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-----------~---- 279 (508)
..... ....+|+.|+|||++.+..++.++||||||+++|+|+||+.||............. .
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 34567999999999998889999999999999999999998875432111000000 0
Q ss_pred ---hhhcc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 280 ---LLMDS---HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 280 ---~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
..+.. ..........+..+.+|+.+||..||.+|||+.++++|-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 298 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00000 000011233567789999999999999999999999773
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-42 Score=343.58 Aligned_cols=251 Identities=15% Similarity=0.201 Sum_probs=182.3
Q ss_pred ccccc-cCCCCcccEEEEEEEc---CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee--CCcceeee
Q 010529 72 DNIVS-ESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERLLVA 145 (508)
Q Consensus 72 ~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~lv~ 145 (508)
|.+.+ +||+|+||.||+|+.. +++.||||++.... ....+.+|+.+|+.++||||+++++++.. ....+|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 44534 6999999999999965 47889999997543 34578999999999999999999999954 66789999
Q ss_pred ecCCCCCHHHHhhcc-------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee----CCCCCeEEcccC
Q 010529 146 EYMPNDTLAKHLFHW-------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF----DEDGDPRLSCFG 214 (508)
Q Consensus 146 E~~~~~sL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~Dfg 214 (508)
||+. ++|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 9996 5788877522 1235999999999999999999999999 9999999999999 677899999999
Q ss_pred CccccCCC-------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-----cchhhh
Q 010529 215 LMKNSMDG-------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-----ENLNLL 281 (508)
Q Consensus 215 ~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-----~~~~~~ 281 (508)
++...... ....||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.....+.... ..+..+
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99765432 34568999999999987 458999999999999999999998875321110000 000000
Q ss_pred -----------hc-------------c---ccCCCCC---------HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 282 -----------MD-------------S---HLEGKFS---------SEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 282 -----------~~-------------~---~~~~~~~---------~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
+. . ....... ...+..+.+|+.+||..||.+|||+.++++|-+-
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f 337 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 00 0 0000000 0114568899999999999999999999998655
Q ss_pred h
Q 010529 326 L 326 (508)
Q Consensus 326 ~ 326 (508)
.
T Consensus 338 ~ 338 (405)
T 3rgf_A 338 L 338 (405)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=344.66 Aligned_cols=252 Identities=15% Similarity=0.169 Sum_probs=192.9
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC-----------hhHHHHHHHHhccCCCCCCcceeeeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD-----------PTQFKEEAEGVGKLRRKRLANLIGYCCA 137 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nIv~~~~~~~~ 137 (508)
-+.|.+++.||+|+||.||+|...++..||||++....... .+.+.+|+.+++.++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 45678899999999999999998789999999996543322 1679999999999999999999999854
Q ss_pred C-----CcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcc
Q 010529 138 G-----DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSC 212 (508)
Q Consensus 138 ~-----~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 212 (508)
. ...++||||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEe
Confidence 3 35799999997 688888864 4457999999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCC---CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc--------cc---
Q 010529 213 FGLMKNSMDG---KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG--------EN--- 277 (508)
Q Consensus 213 fg~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~--------~~--- 277 (508)
||++...... ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.......... ..
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 257 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHH
Confidence 9999754333 34567889999999876 678999999999999999999998876432110000 00
Q ss_pred --------hhhhhccccCCC-------CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 278 --------LNLLMDSHLEGK-------FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 278 --------~~~~~~~~~~~~-------~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
....+....... .....++.+.+|+.+||..||.+|||+.++++|-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 318 (362)
T 3pg1_A 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318 (362)
T ss_dssp HHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc
Confidence 000000000000 0112356789999999999999999999999873
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=339.15 Aligned_cols=251 Identities=16% Similarity=0.112 Sum_probs=175.9
Q ss_pred cccccc-cCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee----CCcceee
Q 010529 71 SDNIVS-ESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERLLV 144 (508)
Q Consensus 71 ~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~lv 144 (508)
+|.+++ .||+|+||.||+|+.. +++.||||++... .....+....++.+.||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 567765 4899999999999965 6899999998642 2222333344566799999999999876 4458999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCccccCC
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~~~ 221 (508)
|||++|++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++.....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999997655567999999999999999999999999 999999999999975 45599999999976544
Q ss_pred C--CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc--ccCCCCCHHHHHH
Q 010529 222 G--KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS--HLEGKFSSEEATQ 297 (508)
Q Consensus 222 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 297 (508)
. ....+|+.|+|||++.+..++.++||||||+++|+|++|..|+...............+... ..........+..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 3 34567999999999988889999999999999999999998875432221111111111110 0111112345678
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
+.+|+.+||..||.+|||+.+++++-+-.
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 292 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNHPWIN 292 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 99999999999999999999999986543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-43 Score=345.65 Aligned_cols=250 Identities=19% Similarity=0.217 Sum_probs=196.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccce
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~~ 142 (508)
..|.+++.||+|+||.||+|.. .++..||||++...... ....+.+|++++.+++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 3688999999999999999995 46888999999754322 135789999999999999999999998754 3579
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 107 iv~e~~~-~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEECCS-EEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEcccC-cCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 9999996 68999885 346999999999999999999999999 999999999999999999999999999755432
Q ss_pred -------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-------chhh-------
Q 010529 223 -------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-------NLNL------- 280 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-------~~~~------- 280 (508)
....||+.|+|||++.+ ..++.++||||||+++|+|+||+.||........... ....
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 33478999999998754 4589999999999999999999988754321100000 0000
Q ss_pred -----hhccc-cCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 281 -----LMDSH-LEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 281 -----~~~~~-~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..... ..... ....+.++.+|+.+||..||.+|||+.++++|-+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00000 00001 1223567899999999999999999999998743
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=332.08 Aligned_cols=246 Identities=18% Similarity=0.238 Sum_probs=192.3
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeee------------
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA------------ 137 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------------ 137 (508)
+|++++.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 578889999999999999995 468999999996432 234578999999999999999999998865
Q ss_pred -CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 138 -GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 138 -~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
....++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3567999999999999999964 4456888999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC------------------CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccc
Q 010529 217 KNSMDG------------------KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGEN 277 (508)
Q Consensus 217 ~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~ 277 (508)
...... ....||+.|+|||++.+. .++.++||||||+++|+|++ |+............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 765321 234578999999999764 68999999999999999998 33221110000000
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 278 LNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.. ........++...+..+.+|+.+||..||.+|||+.+++++-
T Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 241 LRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp HHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 000 011122233445567789999999999999999999999863
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=346.61 Aligned_cols=247 Identities=21% Similarity=0.279 Sum_probs=191.6
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc------cee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE------RLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~------~~l 143 (508)
..|.+++.||+|+||.||+|+...+..||+|++.... ....+|+.+++.++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 3588899999999999999998776669999886433 223479999999999999999999865433 789
Q ss_pred eeecCCCCCHHHHhhc--cCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEcccCCccccC
Q 010529 144 VAEYMPNDTLAKHLFH--WEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~~ 220 (508)
||||++++ |...+.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99999865 4443321 13567999999999999999999999999 99999999999998 79999999999998654
Q ss_pred CC---CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc--------c---hhhhhccc
Q 010529 221 DG---KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE--------N---LNLLMDSH 285 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~--------~---~~~~~~~~ 285 (508)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||........... . +..+....
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 33 345789999999998764 589999999999999999999988765321100000 0 00000000
Q ss_pred ------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 286 ------------LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 286 ------------~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+...++...++++.+|+.+||..||.+|||+.++++|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0001122346789999999999999999999999988
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=337.15 Aligned_cols=250 Identities=16% Similarity=0.183 Sum_probs=201.7
Q ss_pred CcccccccCCCCcccEEEEEEE--cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCC------CCcceeeeeeeCCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL--ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRK------RLANLIGYCCAGDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------nIv~~~~~~~~~~~~ 141 (508)
++|++++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++.++|+ +|+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 5789999999999999999986 358889999996432 2245788999999888665 499999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-----------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE----------------- 204 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~----------------- 204 (508)
++||||+ +++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 899999997655557999999999999999999999999 999999999999987
Q ss_pred --CCCeEEcccCCccccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------
Q 010529 205 --DGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR------- 274 (508)
Q Consensus 205 --~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~------- 274 (508)
++.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|||++|..|+.........
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999865443 4457899999999999889999999999999999999999887643211000
Q ss_pred ccchhhhhc------------------------------cc-cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 275 GENLNLLMD------------------------------SH-LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 275 ~~~~~~~~~------------------------------~~-~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......++. .. .........++.+.+|+.+||..||.+|||+.++++|
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 000000000 00 0011233567889999999999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=334.05 Aligned_cols=250 Identities=22% Similarity=0.271 Sum_probs=199.8
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCC--CCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~lv 144 (508)
-..|.+++.||+|+||.||+|...+++.||||++...... ....+.+|+.++.+++ ||||+++++++...+..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 3568899999999999999999888999999999754332 2457899999999996 59999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
|| +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||++......
T Consensus 107 ~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 107 ME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCC------
T ss_pred Ee-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEE-CCeEEEeeccccccccCccc
Confidence 99 457899999974 457899999999999999999999999 99999999999996 489999999999865433
Q ss_pred ----CccccCCCCCCcccccc-----------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC
Q 010529 223 ----KSYSTNLAYTPPEYLKN-----------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.|+....... ............
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~ 258 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHE 258 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSC
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---HHHHHHHhcccc
Confidence 23467999999999865 467889999999999999999998865321111 112222232222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
..++...+..+.+|+.+||..||.+|||+.+++++-+-.
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~ 297 (313)
T 3cek_A 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297 (313)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence 233334467799999999999999999999999986554
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=334.07 Aligned_cols=251 Identities=15% Similarity=0.157 Sum_probs=192.0
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeee------------
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCC------------ 136 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~------------ 136 (508)
++|.+++.||+|+||.||+|... +++.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56889999999999999999965 48899999997654444567899999999999999999999873
Q ss_pred --eCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEccc
Q 010529 137 --AGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCF 213 (508)
Q Consensus 137 --~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Df 213 (508)
+....++||||+. ++|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3457799999997 69999984 567999999999999999999999999 99999999999997 5679999999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc---------
Q 010529 214 GLMKNSMDG-------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE--------- 276 (508)
Q Consensus 214 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~--------- 276 (508)
|++...... ....+|..|+|||++.+ ..++.++||||||+++|+|+||+.|+...........
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865422 23456889999998865 6789999999999999999999988754321100000
Q ss_pred --chhhh-------hccccC-CCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 277 --NLNLL-------MDSHLE-GKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 277 --~~~~~-------~~~~~~-~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
....+ +..... ... ....+.++.+|+.+||..||.+|||+.++++|-+-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 309 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence 00000 000000 000 12246779999999999999999999999988443
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=340.37 Aligned_cols=249 Identities=15% Similarity=0.188 Sum_probs=194.7
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcc-----
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDER----- 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~----- 141 (508)
..|.+++.||+|+||.||+|.. .+|+.||||++....... ...+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4678889999999999999995 468899999997543222 35788999999999999999999999876654
Q ss_pred -eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 142 -LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 142 -~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
++||||+. ++|.+++. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 68888773 35999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-------c------------hh
Q 010529 221 DG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-------N------------LN 279 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-------~------------~~ 279 (508)
.. ....+|+.|+|||++.+ ..++.++||||||+++|+|+||+.||........... . ..
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 43 34578999999999877 6789999999999999999999988754321100000 0 00
Q ss_pred hhhccccCCC------CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 280 LLMDSHLEGK------FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 280 ~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.......... .....++.+.+|+.+||..||.+|||+.++++|-+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0000000000 01123678999999999999999999999998743
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-42 Score=327.35 Aligned_cols=246 Identities=19% Similarity=0.192 Sum_probs=200.4
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCC--CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVA--WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
..|++++.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++......++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 46789999999999999999964 68899999986532 2346689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC---CCeEEcccCCccccCCC-
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED---GDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~Dfg~a~~~~~~- 222 (508)
|+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.+ +.+||+|||++......
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999999998863 346999999999999999999999999 9999999999999754 46999999998765543
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCC--CHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKF--SSEEATQV 298 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 298 (508)
....+|+.|+|||++.+ .++.++||||||+++|+|++|..|+........ ...+......... ....+..+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 253 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI----LKRVETGKYAFDLPQWRTISDDA 253 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCSGGGTTSCHHH
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCchhhhhcCHHH
Confidence 23457899999999865 588999999999999999999988654321111 1111111111111 12346779
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHH
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
.+++.+||..||.+|||+.+++++-
T Consensus 254 ~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 254 KDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHcccChhhCcCHHHHhcCH
Confidence 9999999999999999999999874
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=337.11 Aligned_cols=253 Identities=19% Similarity=0.218 Sum_probs=186.3
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCc------
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE------ 140 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~------ 140 (508)
.++.|.+++.||+|+||.||+|+. .+++.||||++.... .....+.+++..+..++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 345778999999999999999996 468999999986543 334577888999999999999999999876433
Q ss_pred -ceeeeecCCCCCHHHHhhc--cCCCCcChHHHHHHHHHHHHHHHHHH--hCCCceeecCCCcceeeCC-CCCeEEcccC
Q 010529 141 -RLLVAEYMPNDTLAKHLFH--WEKQTIEWPLRLRVAFYIAEALDYCN--TEGRPLYHDLNAYRVLFDE-DGDPRLSCFG 214 (508)
Q Consensus 141 -~~lv~E~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lH--~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg 214 (508)
.++||||+.+ +|...+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 7899999975 55544432 24567899999999999999999999 889 999999999999986 8999999999
Q ss_pred CccccCCC---CccccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch-------hhhhc
Q 010529 215 LMKNSMDG---KSYSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL-------NLLMD 283 (508)
Q Consensus 215 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-------~~~~~ 283 (508)
++...... ....||+.|+|||++.+.. ++.++||||||+++|+|+||+.||............. ...+.
T Consensus 178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3e3p_A 178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR 257 (360)
T ss_dssp TCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred CceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHH
Confidence 99866543 3456789999999987644 8999999999999999999998875432111000000 00000
Q ss_pred c-------------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 284 S-------------------HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 284 ~-------------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
. ..........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 0 000111222567899999999999999999999999884
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=342.81 Aligned_cols=253 Identities=17% Similarity=0.192 Sum_probs=201.6
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-----------CCCCcceeeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-----------RKRLANLIGYCC 136 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~~~~~~~ 136 (508)
-.+|.+++.||+|+||.||+|+. .+++.||||++.... .....+.+|+.+++++. ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35789999999999999999995 568899999996432 22457889999999886 899999999997
Q ss_pred eCC----cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeC------CC
Q 010529 137 AGD----ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFD------ED 205 (508)
Q Consensus 137 ~~~----~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~------~~ 205 (508)
..+ ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++ + |+||||||+|||++ ..
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCc
Confidence 654 689999999 89999999765666799999999999999999999998 8 99999999999994 44
Q ss_pred CCeEEcccCCccccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh--ccchhhhh
Q 010529 206 GDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR--GENLNLLM 282 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~--~~~~~~~~ 282 (508)
+.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+||+.||......... ......++
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 57999999999765543 4457899999999999888999999999999999999999887543110000 00000000
Q ss_pred ---------------------------cc-------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 283 ---------------------------DS-------------HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 283 ---------------------------~~-------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.. .....++...+..+.+|+.+||..||.+|||+.++++|
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 00 00113456778999999999999999999999999987
Q ss_pred HH
Q 010529 323 LA 324 (508)
Q Consensus 323 L~ 324 (508)
-+
T Consensus 335 p~ 336 (373)
T 1q8y_A 335 PW 336 (373)
T ss_dssp GG
T ss_pred hh
Confidence 44
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-42 Score=332.56 Aligned_cols=240 Identities=19% Similarity=0.297 Sum_probs=193.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC------ChhHHHHHHHHhccC----CCCCCcceeeeeeeC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKL----RRKRLANLIGYCCAG 138 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~nIv~~~~~~~~~ 138 (508)
++|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 4678899999999999999994 56889999999755332 234567899999888 899999999999999
Q ss_pred Ccceeeeec-CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEcccCCc
Q 010529 139 DERLLVAEY-MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLM 216 (508)
Q Consensus 139 ~~~~lv~E~-~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Dfg~a 216 (508)
+..++|||+ +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999974 446999999999999999999999999 99999999999998 8899999999998
Q ss_pred cccCCC--CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 217 KNSMDG--KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 217 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
...... ....||+.|+|||++.+..+ +.++||||||+++|+|++|+.|+..... .... ...++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~~--~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------ILEA--ELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HHHT--CCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------Hhhh--ccCCccc
Confidence 865543 34568999999999877666 4589999999999999999987653211 1111 1122334
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+..+.+|+.+||..||.+|||+.+++++-+
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 5677999999999999999999999998754
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-42 Score=338.01 Aligned_cols=250 Identities=16% Similarity=0.203 Sum_probs=196.5
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~~ 142 (508)
++|.+++.||+|+||.||+|+.. +|+.||||++...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 56888999999999999999964 6889999999643321 234688999999999999999999998654 5689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 222 (508)
+||||+. ++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999996 689998853 57999999999999999999999999 999999999999999999999999998765422
Q ss_pred --------------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------c-----
Q 010529 223 --------------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------G----- 275 (508)
Q Consensus 223 --------------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~----- 275 (508)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||......... +
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12357889999998764 67899999999999999999999887643211000 0
Q ss_pred --------cchhhhhccccC-CC-----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 276 --------ENLNLLMDSHLE-GK-----FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 276 --------~~~~~~~~~~~~-~~-----~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
......+..... .. .....+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 000000000000 00 01234677899999999999999999999998743
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=334.26 Aligned_cols=249 Identities=15% Similarity=0.190 Sum_probs=194.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCc------
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE------ 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~------ 140 (508)
..|.+.+.||.|+||.||+|+. .+|+.||||++....... ...+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4678889999999999999995 468899999997543222 3578899999999999999999999987654
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 68887763 35999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccc------------hh
Q 010529 221 DG-KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GEN------------LN 279 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~------------~~ 279 (508)
.. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||......... +.. ..
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 43 34578999999999876 67899999999999999999999887543211000 000 00
Q ss_pred hhh---ccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 280 LLM---DSHLE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 280 ~~~---~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
..+ ..... .......+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000 00000 1122345778999999999999999999999998743
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=337.33 Aligned_cols=252 Identities=16% Similarity=0.151 Sum_probs=198.5
Q ss_pred CCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCC-CC-----CCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RK-----RLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~~~~~~~~~~~~ 141 (508)
.++|.+++.||+|+||.||+|+.. +++.||||++.... .....+..|+.+++.++ |+ +|+++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 467889999999999999999954 68889999996432 12456778898888884 55 499999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh--CCCceeecCCCcceeeC--CCCCeEEcccCCcc
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT--EGRPLYHDLNAYRVLFD--EDGDPRLSCFGLMK 217 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~--~~~iiH~Dikp~Nill~--~~~~~kl~Dfg~a~ 217 (508)
+|||||+. ++|.+++.......+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||++.
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999996 599999976555679999999999999999999994 57 99999999999994 57889999999998
Q ss_pred ccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------c----------cchh
Q 010529 218 NSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------G----------ENLN 279 (508)
Q Consensus 218 ~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~----------~~~~ 279 (508)
..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||......... + ....
T Consensus 210 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 289 (382)
T 2vx3_A 210 QLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKAR 289 (382)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHH
T ss_pred ecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHH
Confidence 66543 4567899999999999989999999999999999999999887643111000 0 0000
Q ss_pred hhhccccC-----------------------------------------CCCCHHHHHHHHHHHHHhcccCCCCCCChHH
Q 010529 280 LLMDSHLE-----------------------------------------GKFSSEEATQVVGLASQCLQYEPRERPSTKN 318 (508)
Q Consensus 280 ~~~~~~~~-----------------------------------------~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~ 318 (508)
..+..... ..........+.+|+.+||..||.+|||+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e 369 (382)
T 2vx3_A 290 KFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 369 (382)
T ss_dssp HHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred HHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHH
Confidence 00000000 0011234468999999999999999999999
Q ss_pred HHHHH
Q 010529 319 LVVTL 323 (508)
Q Consensus 319 il~~L 323 (508)
+++|-
T Consensus 370 ~L~hp 374 (382)
T 2vx3_A 370 ALQHS 374 (382)
T ss_dssp HTTSG
T ss_pred HhcCc
Confidence 99873
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=333.47 Aligned_cols=242 Identities=21% Similarity=0.289 Sum_probs=201.0
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC------ChhHHHHHHHHhccCC--CCCCcceeeeeeeC
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLR--RKRLANLIGYCCAG 138 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~ 138 (508)
-.++|++++.||+|+||.||+|+. .+++.||||++...... ....+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456789999999999999999994 56889999999765332 2356788999999995 59999999999999
Q ss_pred CcceeeeecCCC-CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC-CCCCeEEcccCCc
Q 010529 139 DERLLVAEYMPN-DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLM 216 (508)
Q Consensus 139 ~~~~lv~E~~~~-~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~Dfg~a 216 (508)
+..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 899999864 457899999999999999999999999 99999999999998 7899999999998
Q ss_pred cccCCC--CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 217 KNSMDG--KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 217 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
...... ....||+.|+|||++.+..+ +.++||||||+++|+|+||+.|+..... .... . ...+..
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~---------~--~~~~~~ 265 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-IIRG---------Q--VFFRQR 265 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHHC---------C--CCCSSC
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-hhcc---------c--cccccc
Confidence 865543 34568999999999987665 6789999999999999999987654311 1110 0 012223
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.+..+.+|+.+||..||.+|||+.+++++-+
T Consensus 266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 4567999999999999999999999998743
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=333.97 Aligned_cols=251 Identities=17% Similarity=0.183 Sum_probs=199.2
Q ss_pred CcccccccCCCCcccEEEEEEEc-CC-CEEEEEEecCCCCCChhHHHHHHHHhccCCCCC------CcceeeeeeeCCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NR-QWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR------LANLIGYCCAGDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~~~~~~~~~~~~ 141 (508)
..|++++.||+|+||.||+|... ++ ..||||+++... ...+.+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 56889999999999999999954 34 689999996432 23457889999999987665 89999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee-------------------
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF------------------- 202 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill------------------- 202 (508)
+|||||+ +++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 677777776545567999999999999999999999999 9999999999999
Q ss_pred CCCCCeEEcccCCccccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------
Q 010529 203 DEDGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR------- 274 (508)
Q Consensus 203 ~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~------- 274 (508)
+.++.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|||+||..||.........
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 4557899999999999889999999999999999999999887543211000
Q ss_pred ccchhhhhc------------------------------c-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 275 GENLNLLMD------------------------------S-HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 275 ~~~~~~~~~------------------------------~-~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+.....++. . ..........+..+.+|+.+||..||.+|||+.++++|-
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp 335 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHP 335 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000000000 0 000011234567899999999999999999999999873
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=340.15 Aligned_cols=243 Identities=16% Similarity=0.092 Sum_probs=185.3
Q ss_pred cccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+....+||||||. +
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 345678999999998877778999999998643 245688999999886 89999999999999999999999995 6
Q ss_pred CHHHHhhccCCCC-----cChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC-------------CCeEEccc
Q 010529 152 TLAKHLFHWEKQT-----IEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED-------------GDPRLSCF 213 (508)
Q Consensus 152 sL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~-------------~~~kl~Df 213 (508)
+|.+++....... .++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999996432111 234456789999999999999999 9999999999999654 47999999
Q ss_pred CCccccCCCC--------ccccCCCCCCcccccc-------CCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccc
Q 010529 214 GLMKNSMDGK--------SYSTNLAYTPPEYLKN-------GRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGEN 277 (508)
Q Consensus 214 g~a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~ 277 (508)
|++....... ...||+.|+|||++.+ ..++.++|||||||++|||+| |..|+........ ..
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NI 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HH
Confidence 9998665432 3468999999999975 568899999999999999999 7766543221110 00
Q ss_pred hhhhhc-cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 278 LNLLMD-SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 278 ~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...... ...........+.++.+|+.+||..||.+|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 000000 011112245678899999999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-41 Score=338.29 Aligned_cols=241 Identities=16% Similarity=0.121 Sum_probs=186.6
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.|.+.+.||+|+||+||.....+++.||||++.... ...+.+|+.+|+.+ +|||||++++++.+....|||||||.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 467788899999999776556678899999996432 34577999999999 89999999999999999999999996
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-----CCCeEEcccCCccccCCC--
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-----DGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-----~~~~kl~Dfg~a~~~~~~-- 222 (508)
++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 102 -g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 699999964 3334566677899999999999999999 999999999999943 235789999999765432
Q ss_pred -----CccccCCCCCCccccc---cCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhcccc--CCCCC
Q 010529 223 -----KSYSTNLAYTPPEYLK---NGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHL--EGKFS 291 (508)
Q Consensus 223 -----~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 291 (508)
....||+.|+|||++. ...++.++|||||||++|||+| |..|+........ ........ .....
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~ 253 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-----NILLGACSLDCLHPE 253 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-----HHHTTCCCCTTSCTT
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-----HHHhccCCccccCcc
Confidence 2356899999999997 3567789999999999999999 6665533211110 11111100 01122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 254 ~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp CHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 3456778999999999999999999999976
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=326.75 Aligned_cols=250 Identities=18% Similarity=0.236 Sum_probs=181.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.+++|.+++.||+|+||.||+|... +++.||||++....... .+.+.++..+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 4567889999999999999999964 68999999997554221 12344555678888999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
|||+ ++.+..+... ....+++..+..++.||+.||.|||+. + ++|+||||+|||++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9999 5556555532 356799999999999999999999995 8 999999999999999999999999998755433
Q ss_pred --CccccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc-CCCCCHHH
Q 010529 223 --KSYSTNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL-EGKFSSEE 294 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 294 (508)
....+|+.|+|||++. +..++.++||||||+++|+|++|+.|+....... .....+..... ........
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 256 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTKVLQEEPPLLPGHMGF 256 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHHSCCCCCCSSSCC
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH---HHHHHHhccCCCCCCccCCC
Confidence 2346899999999984 4568889999999999999999998765321110 00111111100 00111234
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTL 323 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L 323 (508)
+..+.+|+.+||..||.+|||+.+++++-
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 67799999999999999999999999873
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-41 Score=348.02 Aligned_cols=260 Identities=17% Similarity=0.164 Sum_probs=199.4
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeee------CC
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCA------GD 139 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------~~ 139 (508)
.+.+|.+++.||.|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 456789999999999999999995 5688999999875432 224578999999999999999999999765 66
Q ss_pred cceeeeecCCCCCHHHHhhccC-CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCC---eEEcccCC
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGD---PRLSCFGL 215 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~Dfg~ 215 (508)
..++||||++|++|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 7899999999999999997532 236999999999999999999999999 999999999999987665 89999999
Q ss_pred ccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh------ccchhhhhc---
Q 010529 216 MKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR------GENLNLLMD--- 283 (508)
Q Consensus 216 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~------~~~~~~~~~--- 283 (508)
+...... ....||+.|+|||++.+..++.++||||||+++|+|+||..||......... .........
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 9865543 3457899999999999999999999999999999999999887543111000 000000000
Q ss_pred -------c--ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHH-----HHHHHhhc
Q 010529 284 -------S--HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLV-----VTLARLQT 328 (508)
Q Consensus 284 -------~--~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il-----~~L~~~~~ 328 (508)
. ..........+..+.+|+.+||..||.+|||+.+++ +.+..+..
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0 001123455788999999999999999999998844 44555443
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=314.19 Aligned_cols=230 Identities=14% Similarity=0.096 Sum_probs=183.7
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..|++++.||+|+||.||+|+.. +++.||||++....... .+.+.+|+.++..++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46889999999999999999964 48899999997655433 257999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcc
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY 225 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 225 (508)
||++|++|.+++.. + ....++..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+++|
T Consensus 111 e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 99999999999942 2 356678999999999999999999 9999999999999999999998554
Q ss_pred ccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC--CCCCHHHHHHHHHHHH
Q 010529 226 STNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE--GKFSSEEATQVVGLAS 303 (508)
Q Consensus 226 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~ 303 (508)
|++ .++.++||||||+++|+|+||+.||............... +..... .......+..+.+|+.
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~ 241 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD-TAGQPIEPADIDRDIPFQISAVAA 241 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBC-TTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHH-hccCCCChhhcccCCCHHHHHHHH
Confidence 333 3678999999999999999999887543211000000000 000000 0111234677999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 304 QCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+||+.||.+| |+.++++.|..+...
T Consensus 242 ~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 242 RSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHcccCCccC-CHHHHHHHHHHHhcc
Confidence 9999999999 999999999998754
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=315.75 Aligned_cols=231 Identities=16% Similarity=0.133 Sum_probs=183.8
Q ss_pred Cccccc-ccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHh-ccCCCCCCcceeeeeee----CCcce
Q 010529 70 SSDNIV-SESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGV-GKLRRKRLANLIGYCCA----GDERL 142 (508)
Q Consensus 70 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~~~~~~~~----~~~~~ 142 (508)
.+|.++ +.||+|+||.||+|.. .+++.||||++.. ...+.+|+.++ +.++||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456676 6699999999999995 5688999999853 35788999988 55599999999999876 66789
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCcccc
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNS 219 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~ 219 (508)
+||||++|++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 9999999999999998655567999999999999999999999999 999999999999987 788999999998643
Q ss_pred CCCCccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----HHHH
Q 010529 220 MDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS----SEEA 295 (508)
Q Consensus 220 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 295 (508)
. +..++.++||||||+++|+|+||+.||...............+... ....+ ...+
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 230 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG--QYEFPNPEWSEVS 230 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTT--CCSSCHHHHTTSC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhc--cccCCchhcccCC
Confidence 2 3567889999999999999999998875432111111101111000 01112 2346
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.++.+|+.+||..||.+|||+.++++|-+-.
T Consensus 231 ~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~ 261 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence 7899999999999999999999999986544
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=331.66 Aligned_cols=239 Identities=15% Similarity=0.104 Sum_probs=181.2
Q ss_pred cccccccCCCCcccEEEEEE-EcCCCEEEEEEecCCCCC---ChhHHHHHHHHhccCCC-CCCcce--------------
Q 010529 71 SDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP---DPTQFKEEAEGVGKLRR-KRLANL-------------- 131 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~nIv~~-------------- 131 (508)
.+.+.+.||+|+||.||+|+ ..+|+.||||++...... ..+.|.+|+.+++.+.| +|+..+
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 35667789999999999999 456899999998743322 25689999999999987 322111
Q ss_pred -------eeeeee-----CCcceeeeecCCCCCHHHHhh-----ccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeec
Q 010529 132 -------IGYCCA-----GDERLLVAEYMPNDTLAKHLF-----HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194 (508)
Q Consensus 132 -------~~~~~~-----~~~~~lv~E~~~~~sL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~D 194 (508)
+.++.. ....+++|+++ +++|.+++. ......+++..++.|+.||+.||.|||+++ |+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrD 236 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTY 236 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCC
Confidence 111111 12356777776 689999884 223556889999999999999999999999 99999
Q ss_pred CCCcceeeCCCCCeEEcccCCccccCCC-CccccCCCCCCcccc----------ccCCcCccccchhhHHHHHHHHhCCC
Q 010529 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYL----------KNGRVIPESVIYSFGTVLLDLLSGKH 263 (508)
Q Consensus 195 ikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Dv~slG~vl~elltg~~ 263 (508)
|||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999998765443 34466 999999999 55568889999999999999999998
Q ss_pred CCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 264 IPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
||...... .....++... ...++.+.+|+.+||..||.+|||+.+++++
T Consensus 316 Pf~~~~~~----~~~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 316 PNTDDAAL----GGSEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCCTTGGG----SCSGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCcchh----hhHHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 87543211 1111111111 1234679999999999999999998888765
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=323.99 Aligned_cols=240 Identities=10% Similarity=0.018 Sum_probs=185.5
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCC--------CChhHHHHHHHHhccCC---------CCCCcc
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW--------PDPTQFKEEAEGVGKLR---------RKRLAN 130 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~nIv~ 130 (508)
...+|.+++.||+|+||.||+|+. +|+.||||++..... ...+.+.+|+.+++.++ |||||+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 345688899999999999999998 678999999976532 12367899999998885 666666
Q ss_pred eeeee-----------------ee-------------CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHH
Q 010529 131 LIGYC-----------------CA-------------GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180 (508)
Q Consensus 131 ~~~~~-----------------~~-------------~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~ 180 (508)
+.+++ .+ .+..|||||||++|++.+.+. ...+++..+..|+.||+.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHH
Confidence 66653 22 678899999999997766663 3578999999999999999
Q ss_pred HHHHH-hCCCceeecCCCcceeeCCCC--------------------CeEEcccCCccccCCCCccccCCCCCCcccccc
Q 010529 181 LDYCN-TEGRPLYHDLNAYRVLFDEDG--------------------DPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKN 239 (508)
Q Consensus 181 L~~lH-~~~~iiH~Dikp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~ 239 (508)
|.||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+
T Consensus 174 L~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 174 LAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 99999 899 99999999999999887 8999999999866543 4579999999999986
Q ss_pred CCcCccccchhhHHH-HHHHHhCCCCCCchhhhhhhccchhhhhc-----cccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010529 240 GRVIPESVIYSFGTV-LLDLLSGKHIPPSHALDMIRGENLNLLMD-----SHLEGKFSSEEATQVVGLASQCLQYEPRER 313 (508)
Q Consensus 240 ~~~~~~~Dv~slG~v-l~elltg~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R 313 (508)
.. +.++||||||++ .+++++|..|+...... ......+.. .......+...++++.+|+.+||+.|
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d---- 323 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS---- 323 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC----
Confidence 65 889999998777 77788898765332100 000111111 11111123467899999999999976
Q ss_pred CChHHHH-HH
Q 010529 314 PSTKNLV-VT 322 (508)
Q Consensus 314 ps~~~il-~~ 322 (508)
|+.+++ +|
T Consensus 324 -sa~e~l~~H 332 (336)
T 2vuw_A 324 -SATDLLCQH 332 (336)
T ss_dssp -SHHHHHHHC
T ss_pred -CHHHHHhcC
Confidence 999998 65
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-33 Score=288.60 Aligned_cols=179 Identities=13% Similarity=0.059 Sum_probs=129.3
Q ss_pred cCCCCcccEEEEEE-EcCCCEEEEEEecCCCCCC----------hhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceee
Q 010529 77 ESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD----------PTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 77 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~----------~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 144 (508)
..+.|+.|.+..++ .-.|+.|+||++....... .++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45667777777766 4458889999997643211 24699999999999 799999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
||||+|++|.++|. ..+.++.. +|+.||+.||.|+|++| ||||||||+|||++.+|++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999997 45566654 58899999999999999 999999999999999999999999999866543
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCC
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK 262 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~ 262 (508)
.+.+||+.|||||++.+ .+...+|+||+|++++++.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 34578999999999965 4667899999999988877664
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=252.86 Aligned_cols=176 Identities=15% Similarity=0.110 Sum_probs=143.3
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCC--------hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--------PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
.+.||+|+||.||+|.. .+..+++|+........ .+++.+|++++++++||||+++..++...+..|||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 35789999999999954 45668998875433221 2348999999999999999977777777888899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|++|++|.+++.. +..|+.|+++||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~ 486 (540)
T 3en9_A 420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA 486 (540)
T ss_dssp CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH
T ss_pred CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCccccc
Confidence 9999999999852 5689999999999999999 999999999999998 9999999999877653
Q ss_pred -------CccccCCCCCCcccccc--CCcCccccchhhHHHHHHHHhCCCC
Q 010529 223 -------KSYSTNLAYTPPEYLKN--GRVIPESVIYSFGTVLLDLLSGKHI 264 (508)
Q Consensus 223 -------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~ 264 (508)
....||+.|||||++.+ ..|+..+|+||..+-..+.+.++.+
T Consensus 487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24568999999999986 5688889999999888888777644
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-26 Score=214.94 Aligned_cols=154 Identities=17% Similarity=0.050 Sum_probs=123.8
Q ss_pred HHHHHhcCCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC------------------ChhHHHHHHHHhcc
Q 010529 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP------------------DPTQFKEEAEGVGK 122 (508)
Q Consensus 61 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~ 122 (508)
.+......-..|.+.+.||.|+||.||+|...+|+.||||+++..... ....+.+|+.+++.
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344445556667778999999999999999977999999999643221 13458899999999
Q ss_pred CCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceee
Q 010529 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLF 202 (508)
Q Consensus 123 l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill 202 (508)
++ | +++.+++. .+..++||||++|++|.+ +. ......++.||+.||.|||+.+ |+||||||+|||+
T Consensus 161 l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~--------~~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl 226 (282)
T 1zar_A 161 LQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR--------VENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLV 226 (282)
T ss_dssp TT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC--------CSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEE
T ss_pred cc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc--------hhhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEE
Confidence 99 5 66666553 466799999999999988 42 1234579999999999999999 9999999999999
Q ss_pred CCCCCeEEcccCCccccCCCCccccCCCCCCccccc
Q 010529 203 DEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLK 238 (508)
Q Consensus 203 ~~~~~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~ 238 (508)
+ ++.+||+|||+++. +..++|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~---------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE---------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------CCCCCHHHHHH
Confidence 9 99999999999863 44578999875
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=183.34 Aligned_cols=147 Identities=11% Similarity=0.033 Sum_probs=113.0
Q ss_pred HHHHHhcCCCcccccccCCCCcccEEEEEEE-cCCCE--EEEEEecCCCCCC------------------------hhHH
Q 010529 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRL-ENRQW--IAVKKFTKVAWPD------------------------PTQF 113 (508)
Q Consensus 61 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~~~ 113 (508)
.+....+.-..|.+.+.||.|+||.||+|.. .+|+. ||||+++...... ...+
T Consensus 38 ~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (258)
T 1zth_A 38 TLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWT 117 (258)
T ss_dssp HHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHH
T ss_pred HHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHH
Confidence 3344444444577889999999999999997 78888 9999975432111 1258
Q ss_pred HHHHHHhccCCCCCC--cceeeeeeeCCcceeeeecCCC-C----CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHH-
Q 010529 114 KEEAEGVGKLRRKRL--ANLIGYCCAGDERLLVAEYMPN-D----TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN- 185 (508)
Q Consensus 114 ~~E~~~l~~l~h~nI--v~~~~~~~~~~~~~lv~E~~~~-~----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH- 185 (508)
.+|+.+|..+.|++| +.++++ ...+|||||+.+ | +|.++... .++..+..++.||+.+|.|||
T Consensus 118 ~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 118 EKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHH
Confidence 899999999988764 444432 367899999932 3 67766531 345678899999999999999
Q ss_pred hCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 186 TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 186 ~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
+.+ |+||||||+|||++. .++|+|||+|...
T Consensus 189 ~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 189 EAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 889 999999999999988 9999999999754
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-21 Score=157.10 Aligned_cols=108 Identities=14% Similarity=0.218 Sum_probs=103.9
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..++++|+.++..|+|++|++.|+++|+++|. ++.+|+++|.||..+|++++|+.+|++||+++|+++.+|+++|.+
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 90 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 4677899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
|..+|++++|+++|++|++++|+|..++.
T Consensus 91 ~~~~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 99999999999999999999999986543
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=156.19 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=103.6
Q ss_pred HHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------------hHHHhhHHHHHHhhCCHHHHHHHHHHHHHh
Q 010529 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------------PTVYARRSLCHLFSDRSDAALLDAMQAQCA 463 (508)
Q Consensus 396 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 463 (508)
+..+..+.+.|+.++..|+|++|+++|++||+++|. + +.+|+|+|.|+..+|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 456889999999999999999999999999999998 4 239999999999999999999999999999
Q ss_pred -------CCCcHHHH----HHHHHHHHHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 464 -------HPDWPTAF----YMQSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 464 -------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
+|+++++| |++|.+|..+|++++|+.+|++|++++|+++-...
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 99999999999999999999999999999876554
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-19 Score=175.85 Aligned_cols=148 Identities=11% Similarity=0.039 Sum_probs=105.7
Q ss_pred HHHHHhcCCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC--------------ChhHH--------HHHHH
Q 010529 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP--------------DPTQF--------KEEAE 118 (508)
Q Consensus 61 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~--------~~E~~ 118 (508)
-+....+.-.-|.+.++||.|++|.||+|...+|+.||||+++..... ..... .+|..
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 344445555568999999999999999999889999999997643111 01111 34566
Q ss_pred HhccCCCCCCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCc
Q 010529 119 GVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198 (508)
Q Consensus 119 ~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~ 198 (508)
.|.++.+.++.-..-+. ....+|||||++|++|..+.. ......++.||+.+|.+||..| ||||||||.
T Consensus 166 nL~rL~~~gv~vp~p~~--~~~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~ 234 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIA--QSRHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHG-LIHGDFNEF 234 (397)
T ss_dssp HHHHHHHTTCSCCCEEE--EETTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTT-EECSCCSTT
T ss_pred HHHHHHhcCCCCCeeee--ccCceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHH
Confidence 66666443332111111 123479999999988866441 2244678899999999999999 999999999
Q ss_pred ceeeCCCC----------CeEEcccCCcccc
Q 010529 199 RVLFDEDG----------DPRLSCFGLMKNS 219 (508)
Q Consensus 199 Nill~~~~----------~~kl~Dfg~a~~~ 219 (508)
|||++.+| .+.|+||+.+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 99998776 3899999987643
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-18 Score=145.30 Aligned_cols=105 Identities=7% Similarity=-0.068 Sum_probs=101.5
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.+...++..|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+++|.
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 45778899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+|..+|++++|+.+|++|++++|+..
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999764
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.4e-18 Score=140.21 Aligned_cols=103 Identities=15% Similarity=0.136 Sum_probs=97.1
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-------HHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW-------PTA 470 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a 470 (508)
.+..+.+.|+.++..|+|++|++.|++||+++|. ++.+|+|+|.||..+|+|++|+++|++||+++|++ +.+
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHH
Confidence 4677889999999999999999999999999999 99999999999999999999999999999999876 468
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 471 FYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 471 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
|+++|.++..+|++++|+++|++|++++|+.
T Consensus 86 ~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 86 MSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 9999999999999999999999999987754
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=8e-18 Score=145.92 Aligned_cols=106 Identities=19% Similarity=0.166 Sum_probs=101.9
Q ss_pred HHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhc------------------CCCcChHHHhhHHHHHHhhCCHHHHHHHH
Q 010529 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINV------------------NIMVSPTVYARRSLCHLFSDRSDAALLDA 457 (508)
Q Consensus 396 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~ 457 (508)
+..+..+...|+.++..|+|++|+..|+++|++ +|. +..+|+|+|.||..+|+|++|+.+|
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 355788999999999999999999999999999 777 8899999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 458 MQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 458 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.|.
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999999999999999999999987
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=136.20 Aligned_cols=105 Identities=18% Similarity=0.214 Sum_probs=100.8
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
++..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4677899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCc------ccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALE------EKRQR 503 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~------p~~~~ 503 (508)
+..+|++++|+.+|+++++++ |.+..
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~ 113 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKDAEVNNGSSARE 113 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhCcccCCchhHHH
Confidence 999999999999999999999 66654
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=138.56 Aligned_cols=107 Identities=21% Similarity=0.280 Sum_probs=102.9
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.++..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+|+++++++|++..+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34677899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|..+|++++|+.+|+++++++|++...
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 9999999999999999999999998763
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=135.17 Aligned_cols=107 Identities=8% Similarity=0.064 Sum_probs=101.8
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.+...+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 97 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 44667889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|..+|++++|+++|++|++++|.+...
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 9999999999999999999999986543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-17 Score=138.15 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=99.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|+|++|++.|+++|+++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 109 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELL 109 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHH-HHHHhcCccccccc
Q 010529 479 SKLDMQKDAADM-LLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~~~~A~~~-~~~a~~~~p~~~~~ 504 (508)
..+|++++|++. +++|++++|+|...
T Consensus 110 ~~~~~~~~aa~~~~~~al~l~P~~~~~ 136 (150)
T 4ga2_A 110 CKNDVTDGRAKYWVERAAKLFPGSPAV 136 (150)
T ss_dssp HHHCSSSSHHHHHHHHHHHHSTTCHHH
T ss_pred HHcCChHHHHHHHHHHHHHhCcCCHHH
Confidence 999999988876 58999999998754
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=129.76 Aligned_cols=101 Identities=9% Similarity=0.044 Sum_probs=92.1
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
+...|..++..|++++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|++|++++|++..+|+++|.+|..+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCcccccc
Q 010529 482 DMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
|++++|+..|+++++++|.+..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999998753
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=132.24 Aligned_cols=107 Identities=9% Similarity=0.066 Sum_probs=101.7
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.+...+...|..++..|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 34566788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|..+|++++|+.+|+++++++|.+...
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 9999999999999999999999987643
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-16 Score=133.42 Aligned_cols=94 Identities=12% Similarity=-0.003 Sum_probs=88.3
Q ss_pred hhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRS----------DAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
+.+.|++|+..|+++++++|. ++++|+++|.++..++++ ++|+..|++||+++|++.++|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 567899999999999999999 999999999999999886 599999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHhcCcccccccc
Q 010529 481 LD-----------MQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 481 ~~-----------~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+| ++++|+++|++|++++|+|..++
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 85 89999999999999999987654
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.8e-15 Score=123.96 Aligned_cols=102 Identities=21% Similarity=0.304 Sum_probs=99.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 566789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..+|++++|+..|++|++++|++
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHHHHHHHHHHChhH
Confidence 99999999999999999999984
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=136.93 Aligned_cols=106 Identities=19% Similarity=0.098 Sum_probs=97.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhh----------------HHHHHHhhCCHHHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYAR----------------RSLCHLFSDRSDAALLDAMQAQC 462 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~ 462 (508)
+..+..+|..++..|+|++|+..|+++++++|. ++.+|++ +|.+|..+|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999 99999999999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 463 AHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 463 ~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++|+++.+|+++|.+|..+|++++|+.+|+++++++|.+..++
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999999999999999999986543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6.4e-16 Score=132.11 Aligned_cols=100 Identities=9% Similarity=-0.091 Sum_probs=93.0
Q ss_pred hhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 010529 405 QGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQ 484 (508)
Q Consensus 405 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~ 484 (508)
.|..+...|++++|+..|++++..+|. ++..++++|.+|+.+|+|++|++.|+++++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcccccccc
Q 010529 485 KDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 485 ~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++|+.+|++|++++|++...+
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999986543
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=130.35 Aligned_cols=110 Identities=15% Similarity=0.217 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh----------------HHHhhHHHHHHhhCCHHHHHHHH
Q 010529 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP----------------TVYARRSLCHLFSDRSDAALLDA 457 (508)
Q Consensus 394 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~~~ 457 (508)
+....+..+...|..++..|+|++|+..|++++++.|. ++ .+|+++|.+|..+|++++|+.+|
T Consensus 33 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 111 (198)
T 2fbn_A 33 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 34456788899999999999999999999999999999 77 89999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 458 MQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 458 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+++++++|++..+|+++|.+|..+|++++|+++|++|++++|.+...
T Consensus 112 ~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 158 (198)
T 2fbn_A 112 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDI 158 (198)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 99999999999999999999999999999999999999999988654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7.7e-15 Score=149.28 Aligned_cols=110 Identities=11% Similarity=0.133 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC---------------hHHHhhHHHHHHhhCCHHHHHHHHHH
Q 010529 395 QMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS---------------PTVYARRSLCHLFSDRSDAALLDAMQ 459 (508)
Q Consensus 395 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 459 (508)
....+..+..+|+.++..|+|++|+..|++||+++|. + ..+|+|+|.||.++|+|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4456788999999999999999999999999999999 7 69999999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 460 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.|...+
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999987654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.7e-15 Score=142.70 Aligned_cols=110 Identities=13% Similarity=0.115 Sum_probs=104.0
Q ss_pred HHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC---------------hHHHhhHHHHHHhhCCHHHHHHHHHH
Q 010529 395 QMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS---------------PTVYARRSLCHLFSDRSDAALLDAMQ 459 (508)
Q Consensus 395 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 459 (508)
....+..+...|+.++..|+|++|+..|++|++++|. + ..+|+++|.||..+|++++|+.+|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4456788899999999999999999999999999999 7 69999999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 460 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|.+...+
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 9999999999999999999999999999999999999999986543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.2e-15 Score=157.71 Aligned_cols=106 Identities=10% Similarity=0.008 Sum_probs=98.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+.+.|.++...|++++|+..|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.+|
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~ 121 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIH 121 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 677889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+|++++|+++|++|++++|++..++
T Consensus 122 ~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 122 KDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999886543
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=128.23 Aligned_cols=108 Identities=18% Similarity=0.164 Sum_probs=101.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...++++.|+..+.++++++|. +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 344677889999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccccC
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGARA 507 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 507 (508)
..+|++++|+.+|++|++++|++.....+
T Consensus 152 ~~~g~~~~A~~~~~~al~~~p~~a~~~la 180 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEKEEKKAKYELA 180 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHTTHHHHHHCSC
T ss_pred HHCCCHHHHHHHHHHHHhCCccCHHHHHH
Confidence 99999999999999999999998765543
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-14 Score=115.75 Aligned_cols=106 Identities=21% Similarity=0.300 Sum_probs=101.3
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..+...|..++..|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|++..+|+++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+..+|++++|+..|+++++++|.+...
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 108 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNPQL 108 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999999999999987654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.57 E-value=7.3e-15 Score=144.94 Aligned_cols=113 Identities=14% Similarity=0.205 Sum_probs=105.6
Q ss_pred hhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHh----------------cCCCcChHHHhhHHHHHHhhCCHHHHH
Q 010529 391 EWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFIN----------------VNIMVSPTVYARRSLCHLFSDRSDAAL 454 (508)
Q Consensus 391 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~ 454 (508)
...+.+..+..+...|+.++..|+|++|+..|++|++ ++|. +..+|+++|.||..+|+|++|+
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHH
Confidence 3445556678899999999999999999999999999 7888 8999999999999999999999
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 455 LDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 455 ~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+...
T Consensus 294 ~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~ 343 (370)
T 1ihg_A 294 DSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAI 343 (370)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999999999999999999999987654
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-14 Score=119.28 Aligned_cols=105 Identities=19% Similarity=0.309 Sum_probs=100.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|++..+|+++|.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 566788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+|++++|+..|+++++++|.+...
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~ 120 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEA 120 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHH
Confidence 99999999999999999999987654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=152.95 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=65.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+.+.|+++...|++++|++.|++||+++|. ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.+|
T Consensus 77 ~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l 155 (723)
T 4gyw_A 77 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 155 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHH
Confidence 445566666666666666666666666666666 6666666666666666666666666666666666666666666666
Q ss_pred HHcCCHHHHHHHHHHHhcCcccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..+|+|++|++.|++++++.|+.
T Consensus 156 ~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 156 QIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHH
T ss_pred HhcccHHHHHHHHHHHHHhChhH
Confidence 66666666666666666665553
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.55 E-value=1e-14 Score=142.24 Aligned_cols=113 Identities=14% Similarity=0.162 Sum_probs=97.5
Q ss_pred hHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh-----------------HHHhhHHHHHHhhCCHHHHHH
Q 010529 393 TQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP-----------------TVYARRSLCHLFSDRSDAALL 455 (508)
Q Consensus 393 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~ 455 (508)
.+....+..++..|+.++..|+|++|+..|++|+++.|. +. .+|+|+|.||..+|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 344556788999999999999999999999999999999 76 499999999999999999999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 456 DAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 456 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
+|++||+++|++..+|+++|.+|..+|+|++|+.+|++|++++|.+...+.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999876653
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.7e-14 Score=120.70 Aligned_cols=106 Identities=26% Similarity=0.293 Sum_probs=100.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC---hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS---PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
+..+...|..++..|+|++|+..|+++++++|. + ..+|+++|.+|..+|++++|+..++++++++|++..+|+++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 455688999999999999999999999999999 8 899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.++..+|++++|+.+|+++++++|.+...+
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 999999999999999999999999886543
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=6.6e-15 Score=145.62 Aligned_cols=106 Identities=6% Similarity=-0.035 Sum_probs=85.1
Q ss_pred HHHHHHhhhHHhhhhh-HHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKD-FKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
...+..+|.++...|+ +++|+..|+++|+++|. ++.+|+++|.+|..+|++++|+.+|++||+++|++..+|+++|.+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~ 209 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 209 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHH
Confidence 5567778888888885 88888888888888888 888888888888888888888888888888888888888888888
Q ss_pred HHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+..+|++++|+.+|++||+++|.|..+|
T Consensus 210 ~~~~g~~~eAl~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 210 IQEFKLWDNELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHH
Confidence 8888888888888888888888776544
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=136.06 Aligned_cols=104 Identities=20% Similarity=0.296 Sum_probs=100.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|+.++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..+|+++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
..+|++++|+..|++|++++|++..
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~~~ 107 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQRL 107 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCccchh
Confidence 9999999999999999999998753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=130.71 Aligned_cols=105 Identities=12% Similarity=0.135 Sum_probs=100.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|..++..|++++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++|.++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 83 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAY 83 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 345688999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHc-----------CCHHHHHHHHHHHhcCccccccc
Q 010529 479 SKL-----------DMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~-----------~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+ |++++|+..|++|++++|++...
T Consensus 84 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~ 120 (217)
T 2pl2_A 84 VALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPL 120 (217)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHH
Confidence 999 99999999999999999997654
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5.9e-14 Score=121.10 Aligned_cols=108 Identities=23% Similarity=0.299 Sum_probs=102.7
Q ss_pred HHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 396 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...+..+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..+|+++|
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 345778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.++..+|++++|+.+|+++++++|.+...
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 117 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPHDKDA 117 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999987654
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=143.70 Aligned_cols=108 Identities=11% Similarity=-0.011 Sum_probs=103.1
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC-HHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR-SDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
..+..+...|..+...|++++|+..|+++|+++|. +..+|+++|.+|..+|+ +++|+.+|++||+++|++..+|+++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g 173 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 34667888999999999999999999999999999 99999999999999997 99999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.++..+|++++|+.+|++||+++|+|..+|
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 999999999999999999999999997655
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.9e-14 Score=114.79 Aligned_cols=103 Identities=9% Similarity=0.007 Sum_probs=97.3
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh---HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc---HHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP---TVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW---PTAFYMQ 474 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~~ 474 (508)
.+...|..++..|+|++|+..|+++++.+|. +. .+++++|.+|..+|++++|+..|+++++.+|++ +.+++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3577899999999999999999999999999 87 799999999999999999999999999999999 8999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 475 SVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 475 g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|.++..+|++++|+..|+++++..|++...
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 999999999999999999999999987543
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.53 E-value=9.3e-14 Score=125.53 Aligned_cols=97 Identities=8% Similarity=-0.030 Sum_probs=90.8
Q ss_pred hhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----
Q 010529 405 QGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK---- 480 (508)
Q Consensus 405 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~---- 480 (508)
.|.+++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 899999999999999999999999999 999999999999999999999999999999999999999988887743
Q ss_pred -------------------------------cCCHHHHHHHHHHHhcCccccc
Q 010529 481 -------------------------------LDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 481 -------------------------------~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+|+|++|+.+|++|++++|...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 3578999999999999999753
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-14 Score=118.53 Aligned_cols=92 Identities=13% Similarity=0.027 Sum_probs=84.3
Q ss_pred hhhhHHHHHHHHHHHHhc---CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 010529 411 RDKDFKTAIDYYSQFINV---NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDA 487 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 487 (508)
..|++++|+..|++++++ +|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++++|.+|..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 358999999999999999 699 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccc
Q 010529 488 ADMLLEGAALEEKRQR 503 (508)
Q Consensus 488 ~~~~~~a~~~~p~~~~ 503 (508)
+..|+++++++|.+..
T Consensus 81 ~~~~~~al~~~p~~~~ 96 (117)
T 3k9i_A 81 VELLLKIIAETSDDET 96 (117)
T ss_dssp HHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHhCCCcHH
Confidence 9999999999998754
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=113.57 Aligned_cols=107 Identities=18% Similarity=0.327 Sum_probs=101.7
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..+|+.+|.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 44677889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
++..+|++++|+..|+++++++|++...
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 116 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELDPDNETY 116 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHhCCHHHHHHHHHHHHhcCccchHH
Confidence 9999999999999999999999987543
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.1e-14 Score=111.76 Aligned_cols=100 Identities=10% Similarity=0.062 Sum_probs=96.0
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHH
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD--WPTAFYMQSVALS 479 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~ 479 (508)
+...|..++..|++++|+..|+++++++|. +..+|+++|.++..+|++++|+..++++++++|+ +..+|+++|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 456788999999999999999999999999 9999999999999999999999999999999999 9999999999999
Q ss_pred Hc-CCHHHHHHHHHHHhcCccccc
Q 010529 480 KL-DMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 480 ~~-~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.+ |++++|+++|+++++.+|.+.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 88 YIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHhCCHHHHHHHHHHHhhcccCCC
Confidence 99 999999999999999999764
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.5e-14 Score=127.42 Aligned_cols=103 Identities=15% Similarity=0.166 Sum_probs=99.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCC-CcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNI-MVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
...+...|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..|+++++++|++..+|+++|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 35678999999999999999999999999999 7 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
|..+|++++|+..|+++++++|++.
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999976
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=125.61 Aligned_cols=104 Identities=13% Similarity=-0.024 Sum_probs=97.0
Q ss_pred HHHHHHhhhHHhhh-----------hhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc
Q 010529 399 MLEARKQGDTAFRD-----------KDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 467 (508)
...+...|..+... |++++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..|++|++++ ++
T Consensus 73 ~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~ 150 (217)
T 2pl2_A 73 LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-DT 150 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc
Confidence 34567778888888 9999999999999999999 99999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 468 PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 468 ~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+.+|+++|.+|..+|++++|+..|+++++++|.+...
T Consensus 151 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~ 187 (217)
T 2pl2_A 151 PEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDL 187 (217)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH
Confidence 9999999999999999999999999999999987654
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=130.10 Aligned_cols=138 Identities=10% Similarity=-0.018 Sum_probs=110.7
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.|.+...+|.|+.+.||++... +..+++|+...........+.+|+.+++.+ .+..++++++++...+..|+||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 4667777788888999999854 567999998653223345799999999998 47788999999988889999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT------------------------------------------- 186 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~------------------------------------------- 186 (508)
|.+|.+.+. +......++.+++++|..||+
T Consensus 94 G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 94 GVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred CeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999987641 223345788999999999998
Q ss_pred ----------------CCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 187 ----------------EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 187 ----------------~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
.. ++|+|++|.|||+++++.+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 23 7899999999999876556799998764
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-14 Score=122.24 Aligned_cols=87 Identities=8% Similarity=-0.180 Sum_probs=82.2
Q ss_pred HHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Q 010529 418 AIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 418 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~ 497 (508)
+-..|+++++++|. +..+++++|.++..+|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|++|+++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34568889999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 010529 498 EEKRQRGA 505 (508)
Q Consensus 498 ~p~~~~~~ 505 (508)
+|++...+
T Consensus 100 ~P~~~~~~ 107 (151)
T 3gyz_A 100 GKNDYTPV 107 (151)
T ss_dssp SSSCCHHH
T ss_pred CCCCcHHH
Confidence 99987654
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.9e-13 Score=123.86 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=98.4
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH-------HHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP-------TAFY 472 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~a~~ 472 (508)
..+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..++++++++|++. .+|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 45667999999999999999999999999999 999999999999999999999999999999999998 7799
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhcCccc--cccc
Q 010529 473 MQSVALSKLDMQKDAADMLLEGAALEEK--RQRG 504 (508)
Q Consensus 473 ~~g~~~~~~~~~~~A~~~~~~a~~~~p~--~~~~ 504 (508)
++|.++..+|++++|+..|++|++++|. +...
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 155 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDA 155 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHH
Confidence 9999999999999999999999999998 6543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-13 Score=111.13 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=97.2
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-------HHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW-------PTA 470 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a 470 (508)
.+..+...|..++..|++++|+..|+++++.+|. ++.+++++|.+|..+|++++|+..++++++++|++ ..+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3566788999999999999999999999999999 99999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 471 FYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 471 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
|+++|.++..+|++++|+++|+++++++|.
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999884
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=8e-13 Score=119.33 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=97.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH----------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP---------- 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 468 (508)
...+...|..++..|++++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+|++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 346788999999999999999999999999999 999999999999999999999999999999888766
Q ss_pred ------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 469 ------TAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 469 ------~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.+|+++|.++..+|++++|+.+|++|++++|.+.
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999764
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.5e-13 Score=118.07 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=65.2
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|.+++..|++++|+..+.+++...|. ++.++.++|.++...++++.|+..+.++++++|++..+++.+|.+|.
T Consensus 40 ~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 40 ETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 34444555555555555555555555555555 55555555555555555556666666666666777777777777777
Q ss_pred HcCCHHHHHHHHHHHhcCccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|++++|++.|+++++++|.+...
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~ 143 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRA 143 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhH
Confidence 7777777777777777777776543
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-13 Score=141.54 Aligned_cols=106 Identities=24% Similarity=0.288 Sum_probs=100.8
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..+...|..++..|+|++|++.|++|++++|. ++.+|+++|.+|..+|++++|+++|++|++++|+++.+|+++|.+
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3556678899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|..+|++++|+++|++|++++|++...
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~p~~~~~ 110 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVKPHDKDA 110 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCTTH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999999999999988654
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.5e-12 Score=105.91 Aligned_cols=105 Identities=15% Similarity=0.192 Sum_probs=99.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|..++..|++++|+..|+++++.+|. +..+++++|.++...|++++|+..++++++++|++..+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 455678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+|++++|+..|+++++++|.+...
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~ 113 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEA 113 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHH
Confidence 99999999999999999999987543
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.8e-13 Score=115.52 Aligned_cols=104 Identities=12% Similarity=0.048 Sum_probs=99.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHH-HHhhCCH--HHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLC-HLFSDRS--DAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...+...|..++..|++++|+..|+++++++|. ++.+++++|.+ +...|++ ++|+..++++++++|++..+|+.+|
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 456788999999999999999999999999999 99999999999 8899999 9999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.+|..+|++++|+..|+++++++|.+..
T Consensus 123 ~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 123 SDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 9999999999999999999999998754
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-13 Score=111.09 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=90.0
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------HHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------PTAF 471 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~ 471 (508)
++..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 3567789999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH
Q 010529 472 YMQSVALSKLDMQKDAADMLLE 493 (508)
Q Consensus 472 ~~~g~~~~~~~~~~~A~~~~~~ 493 (508)
+++|.++..+|++++|+..|++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999999887765
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.7e-13 Score=111.85 Aligned_cols=81 Identities=15% Similarity=0.039 Sum_probs=75.2
Q ss_pred HHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 424 QFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 424 ~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
++..++|. .+.++.++|.+|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 45568999 99999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cc
Q 010529 504 GA 505 (508)
Q Consensus 504 ~~ 505 (508)
++
T Consensus 83 a~ 84 (126)
T 4gco_A 83 GY 84 (126)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=106.14 Aligned_cols=86 Identities=14% Similarity=0.052 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 010529 416 KTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGA 495 (508)
Q Consensus 416 ~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~ 495 (508)
+.|++.|+++++.+|. ++.+|+++|.+|..+|++++|+..|+++++++|++..+|+++|.+|..+|++++|+..|++|+
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3578999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccc
Q 010529 496 ALEEKRQ 502 (508)
Q Consensus 496 ~~~p~~~ 502 (508)
+++|.+.
T Consensus 81 ~~~~~~~ 87 (115)
T 2kat_A 81 AAAQSRG 87 (115)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9999754
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-12 Score=116.26 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=95.4
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.++..+...|..++..|+|++|+..|++++ + . ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~-~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--D-P-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--S-C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--C-C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 346678899999999999999999999996 3 3 58999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+|..+|++++|+.+|++|+++.|.+.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999875
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.7e-12 Score=117.27 Aligned_cols=106 Identities=18% Similarity=0.198 Sum_probs=100.4
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
....+...|..++..|++++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..++++++++|++..+|+.+|.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 216 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3566788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCc------cccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALE------EKRQRG 504 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~------p~~~~~ 504 (508)
+..+|++++|+..|++|++++ |.+...
T Consensus 217 ~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~ 249 (258)
T 3uq3_A 217 QIAVKEYASALETLDAARTKDAEVNNGSSAREI 249 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhChhhcCCCchHHH
Confidence 999999999999999999999 766543
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=4.1e-12 Score=119.12 Aligned_cols=104 Identities=17% Similarity=-0.003 Sum_probs=100.1
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|++..+|+.+|.+
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~ 120 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 120 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
|..+|++++|+..|+++++++|.+.
T Consensus 121 ~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 121 LYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999875
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.5e-12 Score=118.50 Aligned_cols=104 Identities=11% Similarity=-0.001 Sum_probs=98.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC---hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC---cHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS---PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD---WPTAFY 472 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~a~~ 472 (508)
+..++..|..++..|+|++|+..|+++++..|. + ..+++++|.+|..+|++++|+..|+++++++|+ ...+++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 93 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEY 93 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHH
Confidence 566789999999999999999999999999999 8 899999999999999999999999999999884 478999
Q ss_pred HHHHHHHH--------cCCHHHHHHHHHHHhcCcccccc
Q 010529 473 MQSVALSK--------LDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 473 ~~g~~~~~--------~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.+|.+++. +|++++|+..|+++++++|++..
T Consensus 94 ~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 132 (261)
T 3qky_A 94 ERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132 (261)
T ss_dssp HHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchh
Confidence 99999999 99999999999999999998754
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.3e-13 Score=113.04 Aligned_cols=86 Identities=8% Similarity=-0.112 Sum_probs=81.5
Q ss_pred HHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Q 010529 418 AIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 418 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~ 497 (508)
+-..|+++++++|. +..+++++|.++...|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|++|+++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34568999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 010529 498 EEKRQRG 504 (508)
Q Consensus 498 ~p~~~~~ 504 (508)
+|++...
T Consensus 85 ~p~~~~~ 91 (148)
T 2vgx_A 85 DIXEPRF 91 (148)
T ss_dssp STTCTHH
T ss_pred CCCCchH
Confidence 9998654
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.9e-12 Score=100.86 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=69.0
Q ss_pred cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 428 VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 428 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.+|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|++|++++|.+..
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 4788 99999999999999999999999999999999999999999999999999999999999999999887654
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.7e-12 Score=100.58 Aligned_cols=93 Identities=14% Similarity=0.069 Sum_probs=87.1
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChH-HHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPT-VYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
..+|..++..|+|++|+..|+++++.+|. ++. +|+++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 56889999999999999999999999999 999 99999999999999999999999999999999999866
Q ss_pred CCHHHHHHHHHHHhcCccccccc
Q 010529 482 DMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+.+.+|+..|+++++++|.+...
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred HHHHHHHHHHHHHhccCcccccC
Confidence 78899999999999999987653
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.32 E-value=7.1e-12 Score=114.53 Aligned_cols=105 Identities=13% Similarity=0.049 Sum_probs=96.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh---HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHH---HHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP---TVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPT---AFY 472 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~ 472 (508)
+..++..|..++..|+|++|+..|+++++..|. ++ .+++++|.+|+.+|++++|+..|+++++++|++.. +++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 456788999999999999999999999999987 53 78999999999999999999999999999999865 899
Q ss_pred HHHHHHHH------------------cCCHHHHHHHHHHHhcCccccccc
Q 010529 473 MQSVALSK------------------LDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 473 ~~g~~~~~------------------~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|.++.. +|++++|+..|+++++.+|++...
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a 132 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYT 132 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTH
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhH
Confidence 99999986 579999999999999999998654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-12 Score=118.93 Aligned_cols=126 Identities=13% Similarity=0.070 Sum_probs=96.6
Q ss_pred CCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCC--CcceeeeeeeCCcceeeeecCCCCCHHHH
Q 010529 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR--LANLIGYCCAGDERLLVAEYMPNDTLAKH 156 (508)
Q Consensus 79 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~~~~~~~~~~~~~lv~E~~~~~sL~~~ 156 (508)
+.|..+.||++...+|..++||..... ....+.+|+.+++.+.+.+ ++++++++..++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456679999998777778999997643 2356889999999985434 567899888777889999999998884
Q ss_pred hhccCCCCcChHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 010529 157 LFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG------------------------------------------------ 188 (508)
Q Consensus 157 l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~------------------------------------------------ 188 (508)
.. . . ....++.++++.|..||+..
T Consensus 104 ~~---~--~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 21 1 1 12356777888888888642
Q ss_pred ---------CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 189 ---------RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 189 ---------~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
.++|+|++|.|||+++++.+.|+|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999877667799999865
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-11 Score=100.31 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=95.3
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|..+...|++++|+..|+++++..|. +..+++++|.++...|++++|+..++++++..|++..+++.+|.++.
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 114 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 114 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34567788899999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCcccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+|++++|+..|+++++++|.+
T Consensus 115 ~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 115 KQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999998864
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.3e-12 Score=122.60 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=99.2
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.+...|..++..|++++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|++..+|+++|.+|..
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTN 145 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc
Confidence 3678899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCcccccccc
Q 010529 481 LDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+|++++|+..|+++++++|++...+
T Consensus 146 ~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 146 TSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred cccHHHHHHHHHHHHHhCccchHHH
Confidence 9999999999999999999976654
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-12 Score=129.87 Aligned_cols=104 Identities=11% Similarity=0.022 Sum_probs=98.0
Q ss_pred HHHHHhhhHHhhh---------hhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhh--------CCHHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRD---------KDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFS--------DRSDAALLDAMQAQC 462 (508)
Q Consensus 400 ~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al~ 462 (508)
..+...|..+... |++++|+..|+++++++|. ++.+|+++|.+|..+ |++++|+..|++|++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 3467778888888 9999999999999999999 999999999999999 999999999999999
Q ss_pred hCC---CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 463 AHP---DWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 463 ~~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
++| +++.+|+++|.+|..+|+|++|+++|++|++++|++...
T Consensus 250 ~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a 294 (474)
T 4abn_A 250 VDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEP 294 (474)
T ss_dssp HCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999 999999999999999999999999999999999998754
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-12 Score=138.12 Aligned_cols=104 Identities=8% Similarity=-0.076 Sum_probs=99.8
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|..++..|+|++|++.|+++++++|. ++.+|+++|.+|..+|++++|+++|++|++++|+++.+|+++|.+|.
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE 512 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 46788899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCcccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.+|+|++ +++|++|++++|.+..++
T Consensus 513 ~~g~~~~-~~~~~~al~~~P~~~~a~ 537 (681)
T 2pzi_A 513 LAGNTDE-HKFYQTVWSTNDGVISAA 537 (681)
T ss_dssp HHTCCCT-TCHHHHHHHHCTTCHHHH
T ss_pred HcCChHH-HHHHHHHHHhCCchHHHH
Confidence 9999999 999999999999986543
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.1e-11 Score=100.38 Aligned_cols=102 Identities=17% Similarity=0.211 Sum_probs=96.9
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.+...|..++..|++++|+..|+++++.+|. +..+++++|.++...|++++|+..++++++++|++..+|+.+|.++..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCcccccc
Q 010529 481 LDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.|++++|++.|+++++.+|.+..
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChH
Confidence 99999999999999999987643
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-11 Score=105.98 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=98.9
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|..++..|++++|++.|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..+++.+|.++.
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYE 155 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 44677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|++++|+..|+++++++|++...
T Consensus 156 ~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 156 QMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HcCCHHHHHHHHHHHHHcCCCchhh
Confidence 9999999999999999999987654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=121.40 Aligned_cols=103 Identities=18% Similarity=0.194 Sum_probs=98.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISC 291 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 345678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
..+|++++|+..|++|++++|++.
T Consensus 292 ~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 292 INLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHCCCHHHHHHHHHHHHHhCcccC
Confidence 999999999999999999999853
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=129.41 Aligned_cols=102 Identities=11% Similarity=-0.034 Sum_probs=59.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++++|. +..+|+++|.+|..+|++++|++.|+++++++|++..+++++|.++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 334455555555555555555555555555555 5555555555555555555555555555555555555555555555
Q ss_pred HHc---CCHHHHHHHHHHHhcCcccc
Q 010529 479 SKL---DMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 479 ~~~---~~~~~A~~~~~~a~~~~p~~ 501 (508)
..+ |++++|++.|+++++.+|.+
T Consensus 136 ~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 136 RRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHhhccccHHHHHHHHHHHHhcCCcc
Confidence 555 55555555555555555554
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-11 Score=119.42 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=100.3
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
++..+...|..++..|+|++|+..|+++++.+|. ++.+++++|.++..+|++++|+..|+++++++|++..+|+.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCcc---cccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEE---KRQR 503 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p---~~~~ 503 (508)
+..+|++++|+..|+++++++| .+..
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 109 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKE 109 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHH
Confidence 9999999999999999999999 6543
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.7e-11 Score=115.08 Aligned_cols=102 Identities=10% Similarity=0.077 Sum_probs=91.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHH------------------------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAAL------------------------ 454 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~------------------------ 454 (508)
...+...|..+...|++++|+..|+++++.+|. ++.+++++|.+|..+|++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 445678888899999999999999999999999 9999999999999999988765
Q ss_pred ----------HHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 455 ----------LDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 455 ----------~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..++++++++|++..+++++|.+|..+|++++|++.|+++++++|.+
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 44566688899999999999999999999999999999999999987
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.3e-12 Score=128.98 Aligned_cols=105 Identities=10% Similarity=-0.022 Sum_probs=100.2
Q ss_pred HHHHHHhhhHHhhhhhH-HHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDF-KTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
+..+...|..++..|+| ++|++.|+++++++|. ++.+|+++|.+|..+|++++|+..|++|++++|+ ..+|+++|.+
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~ 179 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMV 179 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHH
Confidence 56678999999999999 9999999999999999 9999999999999999999999999999999999 6999999999
Q ss_pred HHHc---------CCHHHHHHHHHHHhcCcccccccc
Q 010529 478 LSKL---------DMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 478 ~~~~---------~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
|..+ |++++|++.|++|++++|++...+
T Consensus 180 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 180 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 999999999999999999986543
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.27 E-value=9e-12 Score=102.81 Aligned_cols=72 Identities=6% Similarity=-0.046 Sum_probs=68.5
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+.++.++|.++++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 567899999999999999999999999999999999999999999999999999999999999999987643
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-11 Score=119.96 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=108.3
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEec--CCC-CCChhHHHHHHHHhccCC--CCCCcceeeeeeeC---Cc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFT--KVA-WPDPTQFKEEAEGVGKLR--RKRLANLIGYCCAG---DE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~---~~ 140 (508)
+....-+..++.|.++.||++...++ .+++|+.. ... ......+.+|+.+++.+. +..+++++.++.+. +.
T Consensus 37 ~~~~~~~~~l~~G~sn~~y~v~~~~~-~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 37 FAGPLSVEQFKGGQSNPTFKLVTPGQ-TYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCCCCEEEECCC-CCSCEEEEECSSC-EEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CCCCceEEEcCCcccceEEEEEECCc-eEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 33344567889999999999987654 58888775 322 122457889999999996 45688999998766 45
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC---------------------------------
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE--------------------------------- 187 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~--------------------------------- 187 (508)
.|+||||++|.++.+.. ...++..+...++.++++.|..||..
T Consensus 116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999998875422 23477888899999999999999972
Q ss_pred ------------------------CCceeecCCCcceeeCCCCC--eEEcccCCccc
Q 010529 188 ------------------------GRPLYHDLNAYRVLFDEDGD--PRLSCFGLMKN 218 (508)
Q Consensus 188 ------------------------~~iiH~Dikp~Nill~~~~~--~kl~Dfg~a~~ 218 (508)
..++|+|+++.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 23899999999999987653 68999998763
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-11 Score=106.81 Aligned_cols=101 Identities=12% Similarity=0.016 Sum_probs=75.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHH-HhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCH-LFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
...+...|..+...|++++|+..|+++++.+| ++.++..++.+. ...++..+|+..++++++++|+++.+++++|.+
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~ 117 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQ 117 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 55566777777777777777777777777766 344444444332 222333456777888888999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCcccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+..+|++++|+..|+++++++|..
T Consensus 118 ~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 118 YNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHcccHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999875
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.26 E-value=6.7e-11 Score=115.05 Aligned_cols=98 Identities=13% Similarity=0.085 Sum_probs=92.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+.+.|.+++..|+|++|+..|+++|+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..+++++|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 577899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHH-HHHHHHHhcC
Q 010529 479 SKLDMQKDA-ADMLLEGAAL 497 (508)
Q Consensus 479 ~~~~~~~~A-~~~~~~a~~~ 497 (508)
..+|++++| ...|++++..
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 999999999 5567776643
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.26 E-value=5.5e-11 Score=103.84 Aligned_cols=104 Identities=14% Similarity=0.051 Sum_probs=98.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++..+++.+|.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 345678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
..+|++++|+..|+++++++|.+..
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~~~ 145 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNEGK 145 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHcCcHHHHHHHHHHHHhcCccchH
Confidence 9999999999999999999987653
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.9e-11 Score=123.14 Aligned_cols=105 Identities=20% Similarity=0.253 Sum_probs=99.9
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+..+..+|..++..|+|++|+..|+++++.+|+ +.+|+++|.+|..+|++++|+..++++++++|++..+|+.+|.
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 81 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRAS 81 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 45788999999999999999999999999999985 8999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
+|..+|++++|+..|+++++++|.+..
T Consensus 82 ~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 82 ANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999999986543
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4.4e-11 Score=117.27 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=99.2
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
+...|..++..|++++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|++..+|+.+|.++..+
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCcccccccc
Q 010529 482 DMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
|++++|+..|+++++++|.+...+
T Consensus 146 g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 146 SLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHH
Confidence 999999999999999999987655
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.8e-11 Score=112.39 Aligned_cols=100 Identities=12% Similarity=0.046 Sum_probs=61.6
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
+...|..+...|++++|+..|+++++++|. +..+|.++|.+|..+|++++|+..|+++++++|++..+|+++|..++..
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 155 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN 155 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 455566666666666666666666666666 6666666666666666666666666666666666666666666333334
Q ss_pred CCHHHHHHHHHHHhcCccccc
Q 010529 482 DMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+++++|+..|+++++++|.+.
T Consensus 156 ~~~~~A~~~~~~a~~~~p~~~ 176 (272)
T 3u4t_A 156 KEYVKADSSFVKVLELKPNIY 176 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHHHhCccch
Confidence 466666666666666666553
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.6e-11 Score=114.26 Aligned_cols=109 Identities=14% Similarity=0.127 Sum_probs=99.6
Q ss_pred HHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChH----HHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHH
Q 010529 396 MRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPT----VYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAF 471 (508)
Q Consensus 396 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~----~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 471 (508)
+.........|..++..|++++|+..|+++++..|. +.. ++.++|.++..+|++++|+..|+++++++|+++.+|
T Consensus 231 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 309 (359)
T 3ieg_A 231 VKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNAL 309 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHH
Confidence 334555667799999999999999999999999999 774 477899999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 472 YMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 472 ~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+.+|.++..+|++++|+..|++|++++|++...+
T Consensus 310 ~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 310 KDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 9999999999999999999999999999987643
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.24 E-value=6e-12 Score=105.99 Aligned_cols=84 Identities=10% Similarity=-0.067 Sum_probs=77.6
Q ss_pred HHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcc
Q 010529 420 DYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 420 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p 499 (508)
..|+++++++|. +...++++|.+++..|++++|+..|+++++++|+++.+|+.+|.+|..+|+|++|+.+|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 458889999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010529 500 KRQRG 504 (508)
Q Consensus 500 ~~~~~ 504 (508)
.+...
T Consensus 84 ~~~~~ 88 (142)
T 2xcb_A 84 NEPRF 88 (142)
T ss_dssp TCTHH
T ss_pred CCcHH
Confidence 98654
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-11 Score=117.83 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=98.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|..+...|++++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|+++++++|++..+|+++|.+|
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 295 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 295 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 445678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..+|++++|+..|+++++++|++
T Consensus 296 ~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 296 INLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999987
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.4e-11 Score=111.11 Aligned_cols=129 Identities=10% Similarity=0.051 Sum_probs=106.4
Q ss_pred cccchHHHHHHHHHhhcCCCcccccchhhhhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc--ChHHHhh
Q 010529 362 SRMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV--SPTVYAR 439 (508)
Q Consensus 362 s~~d~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~ 439 (508)
..++.......|.......+... .....+...|.+++..|+|++|+..|+++++..|.. ...++++
T Consensus 27 ~~g~~~~A~~~~~~~l~~~p~~~------------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 27 NQGKYDRAIEYFKAVFTYGRTHE------------WAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HTTCHHHHHHHHHHHGGGCSCST------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCCCc------------chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 44555666666665533332211 014567889999999999999999999999998851 4678999
Q ss_pred HHHHHHh--------hCCHHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHH
Q 010529 440 RSLCHLF--------SDRSDAALLDAMQAQCAHPDWPTAF-----------------YMQSVALSKLDMQKDAADMLLEG 494 (508)
Q Consensus 440 ~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~a 494 (508)
+|.+|.. +|++++|+..|+++++.+|++..++ +.+|.+|..+|+|++|+..|+++
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 174 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAV 174 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 9999999 9999999999999999999987766 89999999999999999999999
Q ss_pred hcCccccc
Q 010529 495 AALEEKRQ 502 (508)
Q Consensus 495 ~~~~p~~~ 502 (508)
++..|++.
T Consensus 175 l~~~p~~~ 182 (261)
T 3qky_A 175 FDAYPDTP 182 (261)
T ss_dssp HHHCTTST
T ss_pred HHHCCCCc
Confidence 99999854
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.7e-11 Score=114.31 Aligned_cols=150 Identities=7% Similarity=-0.008 Sum_probs=118.4
Q ss_pred CcchhhccccchHHHHHHHHHhhcCCCcc--cccchhhhhhHHHHHHHHHHHhhhHHhhhh--hHHHHHHHHHHHHhcCC
Q 010529 355 SPLAEACSRMDLTAIHQILVMAHYRDDKE--THELSFQEWTQQMRDMLEARKQGDTAFRDK--DFKTAIDYYSQFINVNI 430 (508)
Q Consensus 355 ~p~~~~~s~~d~~~l~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p 430 (508)
.|+....-..+..++...|........-. .-.++-.-+.........+..+|.++...+ +++++++.++++|..+|
T Consensus 21 ~~~~~i~y~~~y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nP 100 (306)
T 3dra_A 21 PQICQILYDEDYKQIMGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNE 100 (306)
T ss_dssp CCTTCCCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCT
T ss_pred CCceeeeeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCc
Confidence 34444444556666666666543332111 111111112222234678899999999888 99999999999999999
Q ss_pred CcChHHHhhHHHHH----Hhh---CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHhcCcccc
Q 010529 431 MVSPTVYARRSLCH----LFS---DRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQK--DAADMLLEGAALEEKR 501 (508)
Q Consensus 431 ~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~a~~~~p~~ 501 (508)
. +..+|+.|+.++ ..+ ++++++++.++++++++|.+..+|+.++.++..+|+++ ++++.+++++++||.|
T Consensus 101 k-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 101 K-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp T-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred c-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 9 999999999999 777 89999999999999999999999999999999999999 9999999999999999
Q ss_pred cccc
Q 010529 502 QRGA 505 (508)
Q Consensus 502 ~~~~ 505 (508)
..+|
T Consensus 180 ~sAW 183 (306)
T 3dra_A 180 NSAW 183 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8776
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.2e-12 Score=111.15 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=88.3
Q ss_pred hhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHcCC
Q 010529 405 QGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA-LSKLDM 483 (508)
Q Consensus 405 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~~~~~ 483 (508)
.+..+...|++++|+..|+++++.+|. ++.+|+.+|.+|...|++++|+..|+++++++|++..+|+++|.+ +...|+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~ 94 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQ 94 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Confidence 445567889999999999999999999 999999999999999999999999999999999999999999999 889999
Q ss_pred H--HHHHHHHHHHhcCccccccc
Q 010529 484 Q--KDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 484 ~--~~A~~~~~~a~~~~p~~~~~ 504 (508)
+ ++|+..|+++++++|.+...
T Consensus 95 ~~~~~A~~~~~~al~~~p~~~~~ 117 (177)
T 2e2e_A 95 HMTAQTRAMIDKALALDSNEITA 117 (177)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHH
T ss_pred cchHHHHHHHHHHHHhCCCcHHH
Confidence 9 99999999999999987654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.24 E-value=8.1e-11 Score=90.14 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=76.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+...|..++..|++++|+..|+++++++|. +..+++++|.+|..+|++++|+..++++++++|++..+++++|.++
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999999999999999999999999999999999999999998
Q ss_pred HHcC
Q 010529 479 SKLD 482 (508)
Q Consensus 479 ~~~~ 482 (508)
..+|
T Consensus 88 ~~~g 91 (91)
T 1na3_A 88 QKQG 91 (91)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 8765
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.4e-11 Score=120.09 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=101.2
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.++..+...|..++..|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..|+++++++|++..+|+.+|.
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 102 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGH 102 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 44677889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+|..+|++++|+..|+++++++|.+.
T Consensus 103 ~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 103 LLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999875
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.1e-11 Score=110.78 Aligned_cols=105 Identities=16% Similarity=0.153 Sum_probs=99.7
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++..+|+.+|.++.
T Consensus 126 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 204 (243)
T 2q7f_A 126 DLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYA 204 (243)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 34677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCcccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.+|++++|+..|+++++++|++...+
T Consensus 205 ~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 205 YKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HccCHHHHHHHHHHHHccCcchHHHH
Confidence 99999999999999999999986543
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.5e-11 Score=115.59 Aligned_cols=105 Identities=13% Similarity=-0.001 Sum_probs=90.1
Q ss_pred HHHHHHhhhHHhhh-hhHHHHHHHHHHHHhcCCCcC------hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHH--
Q 010529 399 MLEARKQGDTAFRD-KDFKTAIDYYSQFINVNIMVS------PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPT-- 469 (508)
Q Consensus 399 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-- 469 (508)
+..+.+.|.++... |++++|+..|++|+++.|. + ..++.++|.+|..+|+|++|+..|+++++++|+...
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 45678889999996 9999999999999999886 4 567999999999999999999999999999987643
Q ss_pred -----HHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 470 -----AFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 470 -----a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|+++|.++..+|++++|+.+|+++++++|.....
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987653
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-11 Score=111.27 Aligned_cols=103 Identities=11% Similarity=-0.015 Sum_probs=89.1
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.....+..+...|++++|+..|++++..+|. ++.++.++|.++...|++++|+..|+++++++|++..+|+++|.++..
T Consensus 107 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 185 (258)
T 3uq3_A 107 TEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK 185 (258)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Confidence 3333445555666666666666666669999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCccccccc
Q 010529 481 LDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|++++|+..|+++++++|.+...
T Consensus 186 ~~~~~~A~~~~~~al~~~~~~~~~ 209 (258)
T 3uq3_A 186 LMSFPEAIADCNKAIEKDPNFVRA 209 (258)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hCCHHHHHHHHHHHHHhCHHHHHH
Confidence 999999999999999999987654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.9e-11 Score=124.98 Aligned_cols=106 Identities=22% Similarity=0.277 Sum_probs=94.1
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+..+...|..++..|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..|+++++++|++..+|+.+|.
T Consensus 23 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 101 (537)
T 3fp2_A 23 AYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRAS 101 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 35788899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
++..+|++++|+..|+ ++.++|.....
T Consensus 102 ~~~~~g~~~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 102 ANESLGNFTDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHTCHHHHHHHHH-HHC--------
T ss_pred HHHHcCCHHHHHHHHH-HHhcCCCCChH
Confidence 9999999999999995 99999886543
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.1e-11 Score=114.10 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=87.6
Q ss_pred hhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH-HH
Q 010529 410 FRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKD-AA 488 (508)
Q Consensus 410 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~-A~ 488 (508)
...|++++|+..|+++++..|. ++.+|+++|.++..+|++++|+..++++++++|+++.+|+++|.++..+|++++ |.
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 3558999999999999999999 999999999999999999999999999999999999999999999999999987 56
Q ss_pred HHHHHHhcCcccccc
Q 010529 489 DMLLEGAALEEKRQR 503 (508)
Q Consensus 489 ~~~~~a~~~~p~~~~ 503 (508)
+.++++++++|++..
T Consensus 256 ~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 256 RYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHHHHHHCTTCHH
T ss_pred HHHHHHHHhCCCChH
Confidence 888999999999753
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-10 Score=107.24 Aligned_cols=104 Identities=11% Similarity=0.070 Sum_probs=90.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..+++.+|.++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 456677888888888999999999999988888 8888888999999999999999999999999888888888899999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
...|++++|+..|+++++++|.+..
T Consensus 170 ~~~~~~~~A~~~~~~~~~~~~~~~~ 194 (243)
T 2q7f_A 170 ANEGMLDEALSQFAAVTEQDPGHAD 194 (243)
T ss_dssp HHHTCCHHHHHHHHHHHHHCTTCHH
T ss_pred HHcCCHHHHHHHHHHHHHhCcccHH
Confidence 9999999999999998888887654
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.21 E-value=4e-11 Score=112.23 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=90.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHH-HHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRS-LCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a-~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
...+...|..++..|++++|+..|+++++++|. +..+|+++| .+|. .+++++|+..|+++++++|++..+++.+|.+
T Consensus 108 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 185 (272)
T 3u4t_A 108 LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYY-NKEYVKADSSFVKVLELKPNIYIGYLWRARA 185 (272)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 456788999999999999999999999999999 999999999 5555 4599999999999999999999999999999
Q ss_pred HHHcCC---HHHHHHHHHHHhcCcccc
Q 010529 478 LSKLDM---QKDAADMLLEGAALEEKR 501 (508)
Q Consensus 478 ~~~~~~---~~~A~~~~~~a~~~~p~~ 501 (508)
+..+++ +++|+..|++++++....
T Consensus 186 ~~~~~~~~~~~~A~~~~~~a~~~~~~~ 212 (272)
T 3u4t_A 186 NAAQDPDTKQGLAKPYYEKLIEVCAPG 212 (272)
T ss_dssp HHHHSTTCSSCTTHHHHHHHHHHHGGG
T ss_pred HHHcCcchhhHHHHHHHHHHHHHHhcc
Confidence 999999 999999999999887443
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=3.7e-11 Score=119.06 Aligned_cols=104 Identities=12% Similarity=-0.001 Sum_probs=86.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++++|. +..++.++|.++..+|++++|++.|+++++++|+++.+|+++|.++
T Consensus 101 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 179 (388)
T 1w3b_A 101 IDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVF 179 (388)
T ss_dssp HHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345677788888888888888888888888888 8888888888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
...|++++|+..|+++++++|.+..
T Consensus 180 ~~~g~~~~A~~~~~~al~~~p~~~~ 204 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAVTLDPNFLD 204 (388)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHH
Confidence 8888888888888888888887654
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.2e-10 Score=105.32 Aligned_cols=104 Identities=13% Similarity=-0.042 Sum_probs=89.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhh-CCHHHHHHHHHHHHH--hCCCcHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFS-DRSDAALLDAMQAQC--AHPDWPTAFYMQS 475 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~a~~~~g 475 (508)
...+...|..+...|++++|++.|+++++.+|. +..++.++|.+|... |++++|+..++++++ .+|+...+|+.+|
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~ 120 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKG 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHH
Confidence 556777888888889999999999999998888 888888999999999 999999999999888 6677788889999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
.++..+|++++|+..|+++++++|.+..
T Consensus 121 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 148 (225)
T 2vq2_A 121 ICSAKQGQFGLAEAYLKRSLAAQPQFPP 148 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCch
Confidence 9999999999999999999888887643
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=8.2e-11 Score=116.56 Aligned_cols=105 Identities=10% Similarity=-0.015 Sum_probs=79.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++++|. +..+|+++|.++...|++++|+..|+++++++|++..+|+++|.+|
T Consensus 271 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 349 (388)
T 1w3b_A 271 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL 349 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 345666777777777777777777777777777 7777777777777777777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+|++++|+..|+++++++|.+...
T Consensus 350 ~~~g~~~~A~~~~~~a~~~~p~~~~a 375 (388)
T 1w3b_A 350 QQQGKLQEALMHYKEAIRISPTFADA 375 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTTCTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHH
Confidence 77777777777777777777766543
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-10 Score=116.14 Aligned_cols=138 Identities=13% Similarity=0.069 Sum_probs=110.9
Q ss_pred ccchHHHHHHHHHhhcCCCcccccchhhhhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh----HHHh
Q 010529 363 RMDLTAIHQILVMAHYRDDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP----TVYA 438 (508)
Q Consensus 363 ~~d~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~ 438 (508)
.++.+.....+......+++.. ..-.....+.........|..++..|++++|+..|+++++++|. ++ .+|.
T Consensus 224 ~g~~~~A~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~ 299 (450)
T 2y4t_A 224 LGDHELSLSEVRECLKLDQDHK---RCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKE 299 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCChH---HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHH
Confidence 3455555555555432222211 11122223344555677799999999999999999999999999 84 4899
Q ss_pred hHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 439 RRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 439 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
++|.++..+|++++|+..++++++++|+++.+|+.+|.+|..+|++++|+.+|+++++++|++...
T Consensus 300 ~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 365 (450)
T 2y4t_A 300 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQI 365 (450)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998654
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=6.5e-11 Score=113.87 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=98.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcC---------CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVN---------IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPT 469 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 469 (508)
...+...|..+...|++++|+..|++++++. |. ...+++++|.+|..+|++++|+..++++++++|++..
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 271 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS 271 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchH
Confidence 4556788999999999999999999999987 66 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 470 AFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 470 a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|+.+|.++..+|++++|+..|+++++++|.+...
T Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 306 (330)
T 3hym_B 272 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFS 306 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHH
Confidence 99999999999999999999999999999988654
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=5.5e-11 Score=113.25 Aligned_cols=104 Identities=8% Similarity=-0.195 Sum_probs=95.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------hHHHhhHHHHHHhh-CCHHHHHHHHHHHHHhCCCc----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------PTVYARRSLCHLFS-DRSDAALLDAMQAQCAHPDW---- 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~---- 467 (508)
+..+.+.|.++...|++++|+.+|++|+++.+. . +.++.++|.+|..+ |++++|+..|++|+++.|+.
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~-~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 567789999999999999999999999999875 3 56899999999996 99999999999999998865
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 468 --PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 468 --~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
..+|.++|.+|..+|+|++|+..|+++++++|++..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999999999999999999999998754
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-10 Score=120.36 Aligned_cols=104 Identities=16% Similarity=0.040 Sum_probs=99.6
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|..++..|++++|++.|+++++++|. +..+|+++|.+|..+|++++|++.|+++++++|++..+|+++|.+|.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 45678899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|++++|++.|++|++++|++...
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~ 127 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYI 127 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999987643
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=110.84 Aligned_cols=104 Identities=9% Similarity=0.035 Sum_probs=98.8
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.+..+|..++..|++++|+..|+++++.+|. +..+|..+|.++...|++++|+..++++++++|++..+|+.+|.++..
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCcccccccc
Q 010529 481 LDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+|++++|++.|+++++++|.+...+
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHH
Confidence 9999999999999999999876554
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.18 E-value=9.4e-11 Score=108.43 Aligned_cols=104 Identities=11% Similarity=0.044 Sum_probs=98.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHH--hCCCcHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQC--AHPDWPTAFYMQSV 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~~~~g~ 476 (508)
...+...|..++..|++++|++.|+++++.+|. +..+++++|.+|..+|++++|+..++++++ .+|.+..+++.+|.
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~ 149 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGL 149 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHH
Confidence 567888999999999999999999999999999 999999999999999999999999999999 89999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
++..+|++++|+..|+++++++|.+..
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~~~~ 176 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRNQPS 176 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcccHH
Confidence 999999999999999999999998654
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=105.98 Aligned_cols=102 Identities=15% Similarity=0.076 Sum_probs=93.0
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChH---HHhhHHHHHHh------------------hCCHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPT---VYARRSLCHLF------------------SDRSDAALLDAM 458 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~a~~~~~------------------~~~~~~A~~~~~ 458 (508)
..+...|.+++..|+|++|+..|+++++..|. +.. +++.+|.++.. +|++++|+..|+
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 45788999999999999999999999999999 764 79999999986 579999999999
Q ss_pred HHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 459 QAQCAHPDWPTAF-----------------YMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 459 ~al~~~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
++++.+|++..++ +.+|.+|+.+|+|++|+..|+++++..|++.
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 9999999987665 6789999999999999999999999999864
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.16 E-value=2.1e-10 Score=106.01 Aligned_cols=105 Identities=11% Similarity=-0.037 Sum_probs=90.5
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
....+...|..++..|++++|+..|+++++.+|. +..++..+|.+|..+|++++|+..++++++++|++..+++.++.+
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRL 218 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHH
Confidence 3556777888888888888888888888888888 888888888888888888888888888888888888888888888
Q ss_pred HHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
+..+|++++|++.|+++++++|++..
T Consensus 219 ~~~~g~~~~A~~~~~~~~~~~p~~~~ 244 (252)
T 2ho1_A 219 AKVFEDRDTAASYGLQLKRLYPGSLE 244 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTSHH
T ss_pred HHHccCHHHHHHHHHHHHHHCCCCHH
Confidence 88888888888888888888888754
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=111.01 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=97.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++.+|. +..+|.++|.++..+|++++|+..++++++++|++..+|+.+|.++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 250 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSY 250 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 455678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
..+|++++|++.|+++++++|.
T Consensus 251 ~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 251 SNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999998
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.2e-10 Score=106.03 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=88.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH----------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP---------- 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 468 (508)
...+...|..++..|++++|+..|+++++++|. +..+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 155 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAE 155 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 345677888999999999999999999999999 999999999999999999999999999999988764
Q ss_pred ------------------------------------------------------------HHHHHHHHHHHHcCCHHHHH
Q 010529 469 ------------------------------------------------------------TAFYMQSVALSKLDMQKDAA 488 (508)
Q Consensus 469 ------------------------------------------------------------~a~~~~g~~~~~~~~~~~A~ 488 (508)
.+|+.+|.+|..+|++++|+
T Consensus 156 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 235 (275)
T 1xnf_A 156 QKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSAT 235 (275)
T ss_dssp HHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHH
Confidence 56777888888888888888
Q ss_pred HHHHHHhcCcccccc
Q 010529 489 DMLLEGAALEEKRQR 503 (508)
Q Consensus 489 ~~~~~a~~~~p~~~~ 503 (508)
..|+++++++|.+..
T Consensus 236 ~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 236 ALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHTTCCTTCH
T ss_pred HHHHHHHhCCchhHH
Confidence 888888888886543
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.5e-10 Score=103.12 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=97.5
Q ss_pred HHHHHHhhhHHhhh-hhHHHHHHHHHHHHh--cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 399 MLEARKQGDTAFRD-KDFKTAIDYYSQFIN--VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 399 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...+...|..++.. |++++|+..|+++++ ..|. +..+++++|.++..+|++++|+..++++++.+|++..+++.+|
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 154 (225)
T 2vq2_A 76 AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELA 154 (225)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 55678889999999 999999999999999 6677 7899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcc-cccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEE-KRQR 503 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p-~~~~ 503 (508)
.++..+|++++|+..|+++++++| .+..
T Consensus 155 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 183 (225)
T 2vq2_A 155 RTKMLAGQLGDADYYFKKYQSRVEVLQAD 183 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCCHH
Confidence 999999999999999999999999 6543
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.4e-10 Score=98.12 Aligned_cols=100 Identities=14% Similarity=0.027 Sum_probs=90.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH--
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV-- 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~-- 476 (508)
...+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|+++++++|++..++..++.
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 455788899999999999999999999999999 99999999999999999999999999999999999999855544
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p 499 (508)
.+...|++++|+..+.++..+-+
T Consensus 126 ~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 126 KIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccchHHHhc
Confidence 58899999999999998876543
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.15 E-value=6.7e-11 Score=120.70 Aligned_cols=104 Identities=15% Similarity=0.059 Sum_probs=93.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA- 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~- 477 (508)
+..+...|..++..|+|++|+..|++|++++|. ++.+|+++|.+|..+|++++|++.|++|++++|++..+++++|.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 556789999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred -HHHcCCHHHHHHHHH-----------HHhcCcccccc
Q 010529 478 -LSKLDMQKDAADMLL-----------EGAALEEKRQR 503 (508)
Q Consensus 478 -~~~~~~~~~A~~~~~-----------~a~~~~p~~~~ 503 (508)
+..+|++++|++.|+ ++++++|....
T Consensus 119 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~ 156 (477)
T 1wao_1 119 KIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSG 156 (477)
T ss_dssp HHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCS
T ss_pred HHHHHHHHHHHhccccccchhHhhhhhhhccccccccc
Confidence 889999999999999 88888887543
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-10 Score=92.27 Aligned_cols=69 Identities=17% Similarity=0.091 Sum_probs=67.2
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
++.+|+++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+++|++|++++|.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 468899999999999999999999999999999999999999999999999999999999999999997
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2e-10 Score=119.42 Aligned_cols=106 Identities=7% Similarity=-0.107 Sum_probs=101.2
Q ss_pred HHHHHHhhhHHhhhhh----------HHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhC--CHHHHHHHHHHHHHhCCC
Q 010529 399 MLEARKQGDTAFRDKD----------FKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSD--RSDAALLDAMQAQCAHPD 466 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~ 466 (508)
...+..+|.++...|+ +++|++.|+++++.+|+ ++.+|++|+.++..++ ++++|++.+++++++||.
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~ 141 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 141 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc
Confidence 6678888999888888 99999999999999999 9999999999999999 779999999999999999
Q ss_pred cHHHHHHHHHHHHHcC-CHHHHHHHHHHHhcCcccccccc
Q 010529 467 WPTAFYMQSVALSKLD-MQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 467 ~~~a~~~~g~~~~~~~-~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+..||+.+|.++..+| .+++|+++++++|+++|.|..+|
T Consensus 142 N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW 181 (567)
T 1dce_A 142 NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (567)
T ss_dssp CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHH
Confidence 9999999999999999 99999999999999999998776
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.6e-10 Score=108.61 Aligned_cols=102 Identities=14% Similarity=-0.051 Sum_probs=80.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|++++++.|. +..++.++|.+|..+|++++|+..++++++++|++..+|+.+|.++
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 445677777788888888888888888888887 7777888888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHHHhcCcccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..+|++++|+..|++++++.|+.
T Consensus 204 ~~~~~~~~A~~~~~~a~~~~~~~ 226 (330)
T 3hym_B 204 FQNGEWKTAEKWFLDALEKIKAI 226 (330)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHcccHHHHHHHHHHHHHHhhhc
Confidence 88888888888888888776654
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.13 E-value=7.4e-11 Score=99.54 Aligned_cols=72 Identities=11% Similarity=-0.044 Sum_probs=67.4
Q ss_pred hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC-------cHH-----HHHHHHHHHHHcCCHHHHHHHHHHHhcC----
Q 010529 434 PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD-------WPT-----AFYMQSVALSKLDMQKDAADMLLEGAAL---- 497 (508)
Q Consensus 434 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----a~~~~g~~~~~~~~~~~A~~~~~~a~~~---- 497 (508)
+..+.++|.+++.+|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 567899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---cccccccc
Q 010529 498 ---EEKRQRGA 505 (508)
Q Consensus 498 ---~p~~~~~~ 505 (508)
+|++..+|
T Consensus 91 ~e~~pd~~~A~ 101 (159)
T 2hr2_A 91 GELNQDEGKLW 101 (159)
T ss_dssp CCTTSTHHHHH
T ss_pred ccCCCchHHHH
Confidence 99988766
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.13 E-value=8.8e-11 Score=96.34 Aligned_cols=72 Identities=11% Similarity=-0.035 Sum_probs=69.2
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+..|.++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|+|++|+.+|++|++++|.+...
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 74 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA 74 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999998654
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.9e-10 Score=108.14 Aligned_cols=106 Identities=6% Similarity=-0.116 Sum_probs=91.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHH--HHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRS--LCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
...+...|..+...|++++|+..|+++++.+|. +.......| ..+...|++++|+..|+++++.+|+++.+|+++|.
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~ 208 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAA 208 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 345677899999999999999999999999999 754433333 33334589999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++..+|++++|+..|++|++++|.+...+
T Consensus 209 ~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 209 CHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999987543
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.4e-11 Score=116.46 Aligned_cols=181 Identities=13% Similarity=0.077 Sum_probs=121.8
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCC--CcceeeeeeeCC---cceeeeecC
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKR--LANLIGYCCAGD---ERLLVAEYM 148 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--Iv~~~~~~~~~~---~~~lv~E~~ 148 (508)
+..++.|....||++. ..+++|+.... .....+.+|+.+|+.+ .+.. +++++..+...+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4557889999999864 34888986432 1245789999999888 3333 556666554333 358999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE----------------------------------------- 187 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~----------------------------------------- 187 (508)
+|.+|..... ..++..++..++.++++.|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988865432 2467777888888888888888861
Q ss_pred ----------------CCceeecCCCcceeeCC--CCCeEEcccCCccccCCCCccccCCCC---CCcccccc-----CC
Q 010529 188 ----------------GRPLYHDLNAYRVLFDE--DGDPRLSCFGLMKNSMDGKSYSTNLAY---TPPEYLKN-----GR 241 (508)
Q Consensus 188 ----------------~~iiH~Dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~t~~y---~aPE~~~~-----~~ 241 (508)
..++|+|++|.||+++. .+.+.|+||+.+..............+ ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 12699999999999987 456789999988754433222222221 23332211 00
Q ss_pred ---------cCccccchhhHHHHHHHHhCCCCC
Q 010529 242 ---------VIPESVIYSFGTVLLDLLSGKHIP 265 (508)
Q Consensus 242 ---------~~~~~Dv~slG~vl~elltg~~~~ 265 (508)
.....+.|++|.++|.+.+|..++
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111257899999999999998654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2e-10 Score=87.95 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=68.9
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
++.+++++|.++...|++++|+..|+++++++|++..+|+++|.++..+|++++|+..|+++++++|.+...
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 79 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 79 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHH
Confidence 678999999999999999999999999999999999999999999999999999999999999999987654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.08 E-value=5.9e-10 Score=113.16 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=83.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+.+.|.+++..|+|++|+..|++||+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..+++.+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHH
Q 010529 479 SKLDMQKDAADM 490 (508)
Q Consensus 479 ~~~~~~~~A~~~ 490 (508)
..++++++|.+.
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.07 E-value=7.8e-11 Score=114.67 Aligned_cols=104 Identities=13% Similarity=0.010 Sum_probs=59.6
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA-LS 479 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~ 479 (508)
.+.+.|.+++..|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999 999999999999999999999999999999999999999999998 45
Q ss_pred HcCCHHHHHHHHHHHhcCcccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+.+++|...|.+++.++|++....
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~~~~~ 336 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEGGAKS 336 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 66888999999999999999886543
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.9e-10 Score=114.65 Aligned_cols=102 Identities=8% Similarity=-0.021 Sum_probs=69.8
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhc---------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC-------
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINV---------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAH------- 464 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~---------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------- 464 (508)
.+...|.+++..|+|++|++.|++|+++ +|. ....|.|+|.+|..+|++++|+.++++++++.
T Consensus 53 ~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 53 MCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 3455677777777777777777777765 455 56667777777777777777777777777663
Q ss_pred -CCcHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCcccccc
Q 010529 465 -PDWPTAFYMQSVALSKL--DMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 465 -p~~~~a~~~~g~~~~~~--~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
++.+.++.++|.++... ++|++|+.+|++|++++|+|..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~ 173 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPE 173 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHH
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHH
Confidence 34566677777666544 3577777777777777777654
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3e-10 Score=109.16 Aligned_cols=150 Identities=9% Similarity=-0.015 Sum_probs=117.0
Q ss_pred CcchhhccccchHHHHHHHHHhhcCCCcccccc--hhhhhhHHHHHHHHHHHhhhHHhhhh-hHHHHHHHHHHHHhcCCC
Q 010529 355 SPLAEACSRMDLTAIHQILVMAHYRDDKETHEL--SFQEWTQQMRDMLEARKQGDTAFRDK-DFKTAIDYYSQFINVNIM 431 (508)
Q Consensus 355 ~p~~~~~s~~d~~~l~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~ 431 (508)
.|+....-..+...+...+........-....+ +-+-+.........+..++.++...| +++++++.++++|..+|.
T Consensus 42 ~~~~~i~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK 121 (349)
T 3q7a_A 42 NPVVPIMYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK 121 (349)
T ss_dssp SCSSCBCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC
T ss_pred CCeeeeeeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC
Confidence 344445555566666666655433322111111 11111111133667888999988888 599999999999999999
Q ss_pred cChHHHhhHHHHHHhh-C-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--------HHHHHHHHHhcCcccc
Q 010529 432 VSPTVYARRSLCHLFS-D-RSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQK--------DAADMLLEGAALEEKR 501 (508)
Q Consensus 432 ~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~a~~~~p~~ 501 (508)
+..+|+.|+.++..+ + +++++++.++++|+++|.+..||+.++.++..+++++ ++++.++++++++|.|
T Consensus 122 -ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 122 -SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp -CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred -cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 999999999999998 8 8999999999999999999999999999999999998 9999999999999999
Q ss_pred cccc
Q 010529 502 QRGA 505 (508)
Q Consensus 502 ~~~~ 505 (508)
..+|
T Consensus 201 ~SAW 204 (349)
T 3q7a_A 201 NSAW 204 (349)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8776
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.06 E-value=7.8e-10 Score=114.20 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=100.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|+++++++|. +..+|.++|.+|..+|++++|+..++++++++|++..+|+.+|.++
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEIL 388 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+|++++|+..|+++++++|.+...+
T Consensus 389 ~~~g~~~~A~~~~~~a~~~~~~~~~~~ 415 (537)
T 3fp2_A 389 TDRGDFDTAIKQYDIAKRLEEVQEKIH 415 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHhCCHHHHHHHHHHHHHcCCcchhhH
Confidence 999999999999999999999876654
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-09 Score=95.97 Aligned_cols=97 Identities=11% Similarity=0.079 Sum_probs=84.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+.+.|.+++..|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHH-HHHHHHhc
Q 010529 479 SKLDMQKDAA-DMLLEGAA 496 (508)
Q Consensus 479 ~~~~~~~~A~-~~~~~a~~ 496 (508)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999988 44555443
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.3e-10 Score=89.31 Aligned_cols=75 Identities=15% Similarity=0.083 Sum_probs=71.4
Q ss_pred cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc--ccc
Q 010529 428 VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK--RQR 503 (508)
Q Consensus 428 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~--~~~ 503 (508)
++|. ++.+|+++|.++...|++++|+..|+++++++|++..+|+++|.++..+|++++|++.|+++++++|. +..
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 77 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKD 77 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHH
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHH
Confidence 4688 89999999999999999999999999999999999999999999999999999999999999999998 543
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-10 Score=93.30 Aligned_cols=71 Identities=14% Similarity=-0.013 Sum_probs=67.1
Q ss_pred hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 434 PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 434 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
...++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|.+...
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 87 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAV 87 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999998654
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=89.73 Aligned_cols=84 Identities=10% Similarity=-0.082 Sum_probs=80.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|++++|+..|+++++++|. ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCC
Q 010529 479 SKLDM 483 (508)
Q Consensus 479 ~~~~~ 483 (508)
..+|+
T Consensus 129 ~~~~~ 133 (133)
T 2lni_A 129 MAQYN 133 (133)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 98774
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.6e-10 Score=116.00 Aligned_cols=95 Identities=13% Similarity=0.019 Sum_probs=88.6
Q ss_pred hhhhh-HHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC----------HHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 410 FRDKD-FKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR----------SDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 410 ~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...|+ .++|++.|+++|+++|. ++.+|++|+.++..+|+ +++|++.++++++.+|++..||+.+|.++
T Consensus 39 ~~~~~~~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l 117 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 117 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34444 46789999999999999 99999999999999999 99999999999999999999999999999
Q ss_pred HHcC--CHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLD--MQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~--~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..++ +|++|++++++++++||+|..+|
T Consensus 118 ~~l~~~~~~~el~~~~k~l~~d~~N~~aW 146 (567)
T 1dce_A 118 SRLPEPNWARELELCARFLEADERNFHCW 146 (567)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcccccHHHHHHHHHHHHhhccccccHH
Confidence 9999 77999999999999999998876
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=92.06 Aligned_cols=71 Identities=14% Similarity=-0.010 Sum_probs=64.1
Q ss_pred HHHHHHhhhHHhhhhhH----------HHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhC-----------CHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDF----------KTAIDYYSQFINVNIMVSPTVYARRSLCHLFSD-----------RSDAALLDA 457 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~ 457 (508)
+..+.+.|.++...+++ ++|+.+|++||+++|. ++.+|+++|.+|..+| ++++|+.+|
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~ 114 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFF 114 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHH
Confidence 66778888888888765 5999999999999999 9999999999999985 899999999
Q ss_pred HHHHHhCCCcHHH
Q 010529 458 MQAQCAHPDWPTA 470 (508)
Q Consensus 458 ~~al~~~p~~~~a 470 (508)
++|++++|++...
T Consensus 115 ~kAl~l~P~~~~y 127 (158)
T 1zu2_A 115 QQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHCTTCHHH
T ss_pred HHHHHhCCCCHHH
Confidence 9999999998543
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.1e-09 Score=114.89 Aligned_cols=105 Identities=17% Similarity=0.089 Sum_probs=94.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc------CCCcC-hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV------NIMVS-PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAF 471 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 471 (508)
...+...|..+...|++++|++.|++++++ +|. + ..+|.++|.+|...|++++|++.|+++++++|+++.+|
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK-PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG-GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 445677888899999999999999999988 565 4 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 472 YMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 472 ~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+.+|.+|...|++++|++.|+++++++|++...
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~ 586 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEIMA 586 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHH
Confidence 999999999999999999999999999988654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6.7e-10 Score=105.66 Aligned_cols=101 Identities=13% Similarity=0.164 Sum_probs=88.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc-------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV-------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW---- 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 467 (508)
+..+...|..++..|+|++|+..|++|++. .+. ...+++|+|.+|..+|+|++|+..+++|+++.++.
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 456788999999999999999999999952 233 55689999999999999999999999999987544
Q ss_pred --HHHHHHHHHHHHHcCC-HHHHHHHHHHHhcCccc
Q 010529 468 --PTAFYMQSVALSKLDM-QKDAADMLLEGAALEEK 500 (508)
Q Consensus 468 --~~a~~~~g~~~~~~~~-~~~A~~~~~~a~~~~p~ 500 (508)
+.+|+++|.+|..+|+ +++|+++|++|+++...
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999995 79999999999987654
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-10 Score=87.20 Aligned_cols=69 Identities=14% Similarity=0.045 Sum_probs=65.2
Q ss_pred HhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 437 YARRSLCHLFSDRSDAALLDAMQAQCAHPDWPT-AFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 437 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.+++|.++...|++++|+..|+++++++|++.. +|+++|.+|..+|++++|+++|++|++++|.+...+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 467899999999999999999999999999999 999999999999999999999999999999987543
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7e-10 Score=103.81 Aligned_cols=103 Identities=9% Similarity=-0.034 Sum_probs=95.6
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhc--------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh------
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINV--------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA------ 463 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------ 463 (508)
.+..+...|..+...|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 162 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLG 162 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 3556788999999999999999999999998 577 8899999999999999999999999999999
Q ss_pred --CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 464 --HPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 464 --~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+|....+++++|.+|..+|++++|+..|++++++.+++
T Consensus 163 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~ 202 (283)
T 3edt_B 163 PDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEK 202 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 88889999999999999999999999999999986653
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.6e-10 Score=105.74 Aligned_cols=102 Identities=12% Similarity=0.002 Sum_probs=91.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW----- 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 467 (508)
+..+.+.|.++.. |++++|+..|++|+++.+. . ..++.++|.+|..+|+|++|+..|++++++.|+.
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFEN-EERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 4567788999988 9999999999999998875 3 5789999999999999999999999999997654
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 468 -PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 468 -~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
..+++++|.++..+|++++|+.+|++++ ++|....
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 4588999999999999999999999999 9997654
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.8e-10 Score=96.63 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=71.3
Q ss_pred CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 429 NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 429 ~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++. ++..|+++|.+++..|+|++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+...+
T Consensus 7 ~~~-~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 82 (164)
T 3sz7_A 7 PTP-ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAW 82 (164)
T ss_dssp CCH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 445 7889999999999999999999999999999999999999999999999999999999999999999986543
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-10 Score=104.74 Aligned_cols=92 Identities=9% Similarity=-0.053 Sum_probs=88.5
Q ss_pred hhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHH--HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC------H
Q 010529 413 KDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSD--AALLDAMQAQCAHPDWPTAFYMQSVALSKLDM------Q 484 (508)
Q Consensus 413 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~------~ 484 (508)
+++++++++++++++.+|. |..+|++|+.++..+|+++ ++++.++++|+++|.+..||++++.++..+++ +
T Consensus 124 ~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~ 202 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTI 202 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhH
Confidence 7899999999999999999 9999999999999999999 99999999999999999999999999999998 9
Q ss_pred HHHHHHHHHHhcCcccccccc
Q 010529 485 KDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 485 ~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++++++++++|+++|.|..+|
T Consensus 203 ~eEl~~~~~aI~~~p~n~SaW 223 (306)
T 3dra_A 203 DEELNYVKDKIVKCPQNPSTW 223 (306)
T ss_dssp HHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHHHHhCCCCccHH
Confidence 999999999999999998776
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-09 Score=104.50 Aligned_cols=84 Identities=8% Similarity=-0.054 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHh-cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHH
Q 010529 416 KTAIDYYSQFIN-VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPT-AFYMQSVALSKLDMQKDAADMLLE 493 (508)
Q Consensus 416 ~~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~ 493 (508)
++|+..|++|++ ++|. +..+|.++|.++..+|++++|...|+++++++|++.. +|+++|.++...|++++|+..|++
T Consensus 81 ~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 81 DEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp HHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 555555555555 4555 5555555555555555555555555555555555544 555555555555555555555555
Q ss_pred HhcCccc
Q 010529 494 GAALEEK 500 (508)
Q Consensus 494 a~~~~p~ 500 (508)
|++++|.
T Consensus 160 a~~~~p~ 166 (308)
T 2ond_A 160 AREDART 166 (308)
T ss_dssp HHTSTTC
T ss_pred HHhcCCC
Confidence 5555443
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=94.40 Aligned_cols=87 Identities=13% Similarity=0.036 Sum_probs=78.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH-HHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP-TAFYMQSVA 477 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~a~~~~g~~ 477 (508)
...+.+.|.+++..|+|++|+..|+++|+++|. ++.+|+++|.+|..+|++++|+.+|+++++++|++. .+...++.+
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~ 141 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIV 141 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999 999999999999999999999999999999999998 667777777
Q ss_pred HHHcCCHHH
Q 010529 478 LSKLDMQKD 486 (508)
Q Consensus 478 ~~~~~~~~~ 486 (508)
...++++.+
T Consensus 142 ~~~~~~~~~ 150 (162)
T 3rkv_A 142 TERRAEKKA 150 (162)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 766655543
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=102.60 Aligned_cols=98 Identities=7% Similarity=-0.028 Sum_probs=92.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc--------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh-------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV--------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA------- 463 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------- 463 (508)
+..+...|..++..|++++|+..|++++++ .|. ...++.++|.+|..+|++++|+..|++++++
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 121 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 121 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCC
Confidence 566788999999999999999999999987 366 7889999999999999999999999999999
Q ss_pred -CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Q 010529 464 -HPDWPTAFYMQSVALSKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 464 -~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~ 497 (508)
+|....+++++|.+|..+|++++|+..|++++++
T Consensus 122 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 122 FHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999998
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.00 E-value=9.5e-10 Score=91.24 Aligned_cols=77 Identities=9% Similarity=0.019 Sum_probs=71.1
Q ss_pred hcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 427 NVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 427 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+|. ++..|+++|.+++..|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++|++++|.+...
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 79 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKA 79 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHH
Confidence 45677 899999999999999999999999999999999999999999999999999999999999999999987654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=2e-09 Score=87.81 Aligned_cols=85 Identities=15% Similarity=0.041 Sum_probs=81.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..+++.+|.++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 124 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAE 124 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 455678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCH
Q 010529 479 SKLDMQ 484 (508)
Q Consensus 479 ~~~~~~ 484 (508)
..+|++
T Consensus 125 ~~~~~~ 130 (131)
T 2vyi_A 125 LKLREA 130 (131)
T ss_dssp HHHTTC
T ss_pred HHHhcC
Confidence 999886
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-09 Score=102.14 Aligned_cols=106 Identities=7% Similarity=-0.100 Sum_probs=95.5
Q ss_pred HHHHHHhhhHHhhhhh----------HHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC--HHHHHHHHHHHHHhCCC
Q 010529 399 MLEARKQGDTAFRDKD----------FKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR--SDAALLDAMQAQCAHPD 466 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~~~p~ 466 (508)
...+..++.++...+. +++++.+++.++..+|. ++.+|+.|+.++..+++ +++++..++++++++|.
T Consensus 64 ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr 142 (331)
T 3dss_A 64 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 142 (331)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC
Confidence 4455556666555444 79999999999999999 99999999999999995 99999999999999999
Q ss_pred cHHHHHHHHHHHHHcCC-HHHHHHHHHHHhcCcccccccc
Q 010529 467 WPTAFYMQSVALSKLDM-QKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 467 ~~~a~~~~g~~~~~~~~-~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+..||+.++.++..+|. ++++++++.++++.+|.|..+|
T Consensus 143 Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW 182 (331)
T 3dss_A 143 NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 182 (331)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999 6999999999999999998776
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=103.73 Aligned_cols=106 Identities=8% Similarity=0.018 Sum_probs=98.2
Q ss_pred HHHHHHhhhHHhhhh--hHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC-HHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDK--DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR-SDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...+..++.++...+ ++++++++++++++.+|. |..+|++|+.++...|. +++++++++++|+.+|++..||++++
T Consensus 108 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~ 186 (331)
T 3dss_A 108 YGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRS 186 (331)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 556777788777777 599999999999999999 99999999999999999 69999999999999999999999999
Q ss_pred HHHHHc--------------CCHHHHHHHHHHHhcCcccccccc
Q 010529 476 VALSKL--------------DMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 476 ~~~~~~--------------~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.++..+ +.++++++++.+|+.++|+|..+|
T Consensus 187 ~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW 230 (331)
T 3dss_A 187 CLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 230 (331)
T ss_dssp HHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 999988 679999999999999999998876
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.6e-09 Score=100.58 Aligned_cols=101 Identities=13% Similarity=0.147 Sum_probs=88.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHh---cCCCcCh----HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC-----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFIN---VNIMVSP----TVYARRSLCHLFSDRSDAALLDAMQAQCAHPD----- 466 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~---~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~----- 466 (508)
+..+...|..++..|+|++|+..|++|++ ..|. +. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 55678999999999999999999999994 4444 32 68999999999999999999999999998743
Q ss_pred -cHHHHHHHHHHHHHcCCHHHH-HHHHHHHhcCccc
Q 010529 467 -WPTAFYMQSVALSKLDMQKDA-ADMLLEGAALEEK 500 (508)
Q Consensus 467 -~~~a~~~~g~~~~~~~~~~~A-~~~~~~a~~~~p~ 500 (508)
.+.+|+++|.+|..+|++++| ..+|++|+++...
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 378999999999999999999 7889999976543
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-09 Score=112.29 Aligned_cols=105 Identities=12% Similarity=-0.017 Sum_probs=97.0
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChH------HHhhHHHHHHh---hCCHHHHHHHHHHHHHhCCCcHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPT------VYARRSLCHLF---SDRSDAALLDAMQAQCAHPDWPTA 470 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~~~~a 470 (508)
..+...|..++..|++++|+..|+++++++|. +.. +|+++|.++.. +|++++|+..|+++++++|++..+
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 451 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQA 451 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHH
Confidence 45677899999999999999999999999998 755 99999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 471 FYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 471 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
|+.+|.+|..+|++++|+..|+++++++|++...+
T Consensus 452 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 452 KIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999876543
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.4e-09 Score=86.53 Aligned_cols=75 Identities=8% Similarity=-0.125 Sum_probs=70.2
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFY 472 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 472 (508)
.....+...|.+++..|+|++|+..|+++++++|. ++.+++++|.+|..+|++++|+..++++++++|++.....
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 34667889999999999999999999999999999 9999999999999999999999999999999999987654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3.5e-09 Score=104.15 Aligned_cols=92 Identities=18% Similarity=0.130 Sum_probs=87.8
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..+.+.|.+++..|+|++|++.|++||+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHH
Q 010529 478 LSKLDMQKDAADM 490 (508)
Q Consensus 478 ~~~~~~~~~A~~~ 490 (508)
+..++++++|.+.
T Consensus 351 ~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 351 KQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=103.11 Aligned_cols=102 Identities=8% Similarity=0.011 Sum_probs=93.6
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhc--------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh------
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINV--------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA------ 463 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------ 463 (508)
....+...|..+...|++++|++.|++++++ .|. ...+++++|.+|..+|++++|+..+++++++
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 230 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREF 230 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 3556788999999999999999999999998 777 8889999999999999999999999999984
Q ss_pred -------------------------------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 464 -------------------------------------------HPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 464 -------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
+|..+.+|+.+|.+|..+|++++|++.|++|+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 231 GSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp C------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred CCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 5778889999999999999999999999999999876
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=98.96 E-value=5e-09 Score=99.55 Aligned_cols=98 Identities=9% Similarity=-0.055 Sum_probs=86.4
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------hHHHhhHHHHHHhhCCHHHHHHHHHHHH---HhCCCc----H
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------PTVYARRSLCHLFSDRSDAALLDAMQAQ---CAHPDW----P 468 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~----~ 468 (508)
....|..+...|++++|+..|++|+++.+. . ..+|+++|.+|..+|++++|+..|++|+ +..|++ .
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 456788888899999999999999987654 3 5689999999999999999999999999 556663 3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
.+++++|.+|..+|+|++|+..|++|+++.++
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999998764
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.8e-09 Score=102.40 Aligned_cols=94 Identities=9% Similarity=0.012 Sum_probs=88.5
Q ss_pred hhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-C-CHHHH
Q 010529 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSD-RSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL-D-MQKDA 487 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~-~-~~~~A 487 (508)
..+..++|++.++++|.++|. +..+|+.|+.++..+| .++++++.++.+|..+|++..+|+.++.++..+ + +++++
T Consensus 66 ~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~E 144 (349)
T 3q7a_A 66 KEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSE 144 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHH
T ss_pred hCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHH
Confidence 344567899999999999999 9999999999999999 599999999999999999999999999999998 8 99999
Q ss_pred HHHHHHHhcCcccccccc
Q 010529 488 ADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 488 ~~~~~~a~~~~p~~~~~~ 505 (508)
++.+.++++++|+|..+|
T Consensus 145 L~~~~k~L~~dpkNy~AW 162 (349)
T 3q7a_A 145 IEYIHGSLLPDPKNYHTW 162 (349)
T ss_dssp HHHHHHHTSSCTTCHHHH
T ss_pred HHHHHHHHHhCCCCHHHH
Confidence 999999999999998776
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=94.80 Aligned_cols=82 Identities=11% Similarity=-0.126 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHH
Q 010529 414 DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW--PTAFYMQSVALSKLDMQKDAADML 491 (508)
Q Consensus 414 ~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~~~~~~~A~~~~ 491 (508)
+..+|+..|+++++++|. ++.+++++|.++..+|++++|+..|+++++++|++ ..+++++|.++..+|++++|+..|
T Consensus 89 ~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y 167 (176)
T 2r5s_A 89 AESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKY 167 (176)
T ss_dssp TSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred ccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 334579999999999999 99999999999999999999999999999999986 569999999999999999999999
Q ss_pred HHHhc
Q 010529 492 LEGAA 496 (508)
Q Consensus 492 ~~a~~ 496 (508)
++++.
T Consensus 168 ~~al~ 172 (176)
T 2r5s_A 168 RRQLY 172 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=92.12 Aligned_cols=101 Identities=11% Similarity=0.101 Sum_probs=74.2
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc-----ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------H
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV-----SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------P 468 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~ 468 (508)
..+...|..++..|++++|++.|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 356667777888888888888888887765441 14567788888888888888888888887775433 3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
.+++.+|.++..+|++++|++.|++|+++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 46777888888888888888888888776544
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=102.57 Aligned_cols=96 Identities=14% Similarity=0.014 Sum_probs=84.1
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh-hCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF-SDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
.+...|..+...|++++|+..|++|++.+|. ...+|...|..... +|++++|+..|+++++++|+++.+|..+|..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 5777788888889999999999999999998 88888877666443 799999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcC
Q 010529 480 KLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~ 497 (508)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 999999999999999985
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.94 E-value=9.3e-10 Score=105.49 Aligned_cols=103 Identities=12% Similarity=-0.021 Sum_probs=91.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc-----ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV-----SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------ 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 467 (508)
+..+.+.|..+...|+|++|+.+|++|+++.+.. ...++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~ 154 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHH
Confidence 5567788999999999999999999999885421 25789999999999 99999999999999998754
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 468 PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 468 ~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
..+++++|.+|..+|+|++|+..|++|+++.|++.
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999988764
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=3.1e-09 Score=100.83 Aligned_cols=94 Identities=11% Similarity=-0.085 Sum_probs=88.2
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHH
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW--PTAFYMQSVALS 479 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~ 479 (508)
....+..+...+++++|+..|+++++.+|. +..+++++|.+|..+|++++|+..|.++++++|++ ..++.++|.++.
T Consensus 188 ~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 188 GLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 345566677888999999999999999999 99999999999999999999999999999999999 999999999999
Q ss_pred HcCCHHHHHHHHHHHhc
Q 010529 480 KLDMQKDAADMLLEGAA 496 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~ 496 (508)
.+|+.++|+..|++++.
T Consensus 267 ~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 267 ALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHCTTCHHHHHHHHHHH
T ss_pred HcCCCCcHHHHHHHHHH
Confidence 99999999999999985
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.3e-09 Score=111.17 Aligned_cols=101 Identities=11% Similarity=-0.079 Sum_probs=77.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|++.|+++++..|. +..+|+++|.+|...|++++|++.|+++++++|+++.+|+.+|.+|
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 345666777777777777777777777777777 7777777777777777777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHHHHHhcCccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
...|++++|++.|++++++.|+
T Consensus 486 ~~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhhhc
Confidence 7778888888888777777543
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.8e-09 Score=105.38 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=92.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh------HHHhhHHHHHHhhCCHHHHHHHHHHHHH-----hC-CC
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP------TVYARRSLCHLFSDRSDAALLDAMQAQC-----AH-PD 466 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~-p~ 466 (508)
+..+...|..+...|+|++|++.|++|+++.+. .. .+++++|.+|..+|++++|+..+++|++ .+ |.
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEA-EKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 556788999999999999999999999998665 33 5899999999999999999999999999 46 88
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 467 WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 467 ~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
.+.+++++|.++..+|++++|+..|++|+++.++
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.6e-09 Score=103.04 Aligned_cols=101 Identities=7% Similarity=-0.103 Sum_probs=86.4
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc-C----hHHHhhHHHHHHhhCCHHHHHHHHHHHHHh-------CCCcHH
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMV-S----PTVYARRSLCHLFSDRSDAALLDAMQAQCA-------HPDWPT 469 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------~p~~~~ 469 (508)
+...|..+...+++++|+..|++|+++.+.. + ..+++++|.+|..+|++++|+..|++|+++ .+..+.
T Consensus 118 ~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 197 (293)
T 3u3w_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 3447888888899999999999999975541 1 237999999999999999999999999953 234466
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 470 AFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 470 a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+|+++|.+|..+|+|++|+..|++|+++.++..
T Consensus 198 ~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999987754
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.2e-09 Score=94.35 Aligned_cols=102 Identities=8% Similarity=-0.076 Sum_probs=63.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc---CCC---cChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV---NIM---VSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW----- 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 467 (508)
+..+...|..+...|++++|++.|++++++ .+. ....+++++|.++..+|++++|+..+++++++.+..
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 145 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVA 145 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHH
Confidence 445566666666777777777777777665 221 134556667777777777777777777766553211
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 468 -PTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 468 -~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
..++.++|.++..+|++++|++.|++|+++..+
T Consensus 146 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 146 IACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 224566677777777777777777777665443
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.91 E-value=4e-09 Score=105.01 Aligned_cols=103 Identities=11% Similarity=0.077 Sum_probs=95.1
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh----HHHhhHHHHHHhhCCHHHHHHHHHHHHHh------CCC
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP----TVYARRSLCHLFSDRSDAALLDAMQAQCA------HPD 466 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~ 466 (508)
..+..+...|..++..|+|++|+..|+++++++|. +. .+|+++|.+|..+|++++|+..|++++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 34566788999999999999999999999999999 76 58999999999999999999999999999 688
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 467 WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 467 ~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
...+|+.+|.+|..+|++++|+..|++|+++.++
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988543
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.91 E-value=5.5e-09 Score=81.83 Aligned_cols=82 Identities=11% Similarity=0.011 Sum_probs=70.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH--HHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP--TAFYMQSV 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~~g~ 476 (508)
...+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..|++++++.|+.. .+...+..
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~ 85 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQD 85 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHH
Confidence 456788999999999999999999999999999 999999999999999999999999999999987543 33344444
Q ss_pred HHHHc
Q 010529 477 ALSKL 481 (508)
Q Consensus 477 ~~~~~ 481 (508)
.+...
T Consensus 86 ~l~~~ 90 (100)
T 3ma5_A 86 AKLKA 90 (100)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 44443
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.90 E-value=3e-09 Score=105.22 Aligned_cols=102 Identities=13% Similarity=-0.010 Sum_probs=53.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc------ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV------SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW----- 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 467 (508)
+..+...|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..|++|+++.+..
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 222 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQL 222 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHH
Confidence 3444555555555555555555555555543220 22355555555555555555555555555553322
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 468 -PTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 468 -~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
+.+++++|.+|..+|++++|+.+|++|+++.++
T Consensus 223 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 223 MGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 235555555555555555555555555554433
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.90 E-value=5e-09 Score=100.37 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=94.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC----hHHHhhHHHHHHhhCCHHHHHHHHHHHHHh------CCCcH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS----PTVYARRSLCHLFSDRSDAALLDAMQAQCA------HPDWP 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 468 (508)
...+...|..++..|++++|+..|+++++.+|. + ..++.++|.+|...|++++|+..+++++++ .|..+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 456788899999999999999999999999999 7 478999999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+++.+|.++..+|++++|+..|++|+++.++.
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999988764
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.90 E-value=6.8e-09 Score=79.89 Aligned_cols=71 Identities=15% Similarity=0.028 Sum_probs=67.6
Q ss_pred CCCcChHHHhhHHHHHHhhCC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 429 NIMVSPTVYARRSLCHLFSDR---SDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 429 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
+|. ++.++..+|.+++..++ .++|...+++||++||+++.+++.+|..++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 578 99999999999987666 799999999999999999999999999999999999999999999999998
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-08 Score=95.22 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=86.3
Q ss_pred HHHHHHhhhHHhh----hhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHH
Q 010529 399 MLEARKQGDTAFR----DKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTA 470 (508)
Q Consensus 399 ~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a 470 (508)
...+...|..+.. .+++++|+..|+++++.+ ++.+++++|.+|.. .+++++|+..|++|++++ ++.+
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a 112 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEG 112 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHH
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccH
Confidence 5677888999998 999999999999999884 68899999999999 999999999999999884 8899
Q ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHhcCccc
Q 010529 471 FYMQSVALSK----LDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 471 ~~~~g~~~~~----~~~~~~A~~~~~~a~~~~p~ 500 (508)
++++|.+|.. .+++++|+.+|++|+++++.
T Consensus 113 ~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (273)
T 1ouv_A 113 CASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDG 146 (273)
T ss_dssp HHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcH
Confidence 9999999999 99999999999999987743
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.89 E-value=4.4e-09 Score=89.20 Aligned_cols=103 Identities=14% Similarity=0.083 Sum_probs=92.0
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCC-----cChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-----
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIM-----VSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW----- 467 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 467 (508)
.+..+...|..++..|++++|+..|++++++.+. ....++.++|.+|..+|++++|+..+++++++.+..
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 87 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHH
Confidence 4667889999999999999999999999987543 258899999999999999999999999999987653
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 468 -PTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 468 -~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
..+++++|.++..+|++++|++.|++|+++.++
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987654
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=6.3e-09 Score=86.51 Aligned_cols=92 Identities=9% Similarity=0.002 Sum_probs=82.7
Q ss_pred hhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhC---CHHHHHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCCHHH
Q 010529 412 DKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSD---RSDAALLDAMQAQCAH-P-DWPTAFYMQSVALSKLDMQKD 486 (508)
Q Consensus 412 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~ 486 (508)
......+.+.|.+.++.++. +.++.++.|.|+.+.+ +.++|+..++.+++.+ | +..+++|++|.+++++|+|++
T Consensus 11 ~~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 34566778889999998898 9999999999999988 6679999999999999 7 679999999999999999999
Q ss_pred HHHHHHHHhcCccccccc
Q 010529 487 AADMLLEGAALEEKRQRG 504 (508)
Q Consensus 487 A~~~~~~a~~~~p~~~~~ 504 (508)
|+++++++|+++|+|.-+
T Consensus 90 A~~y~~~lL~ieP~n~QA 107 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQA 107 (152)
T ss_dssp HHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcCCCCHHH
Confidence 999999999999998643
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=5e-09 Score=103.71 Aligned_cols=103 Identities=12% Similarity=0.103 Sum_probs=94.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC----hHHHhhHHHHHHhhCCHHHHHHHHHHHHHh------CCCcH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS----PTVYARRSLCHLFSDRSDAALLDAMQAQCA------HPDWP 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 468 (508)
+..+...|..++..|++++|+..|++++++.|. + ..+|.++|.+|...|++++|+..+++++++ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 456788999999999999999999999999999 7 468999999999999999999999999988 46678
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.+++.+|.++..+|++++|+..|++|+++.|+..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999988653
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.9e-09 Score=106.44 Aligned_cols=102 Identities=11% Similarity=-0.004 Sum_probs=73.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhh-------------------CCHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFS-------------------DRSDAALLDAMQ 459 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~~~~~ 459 (508)
...+...|..+...|++++|+..|+++++.+|. ++.+++++|.+|... +.+++|+..+++
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 325 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKK 325 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 345567777777888888888888888888887 777777777776542 335667777777
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 460 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+++++|++..+++.+|.++..+|++++|+.+|++|++++|.+
T Consensus 326 a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 326 ADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp HHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred HhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 777777777777777777777777777777777777666654
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.87 E-value=7.2e-09 Score=96.37 Aligned_cols=100 Identities=8% Similarity=-0.138 Sum_probs=89.2
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC-hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC--CC-cHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS-PTVYARRSLCHLFSDRSDAALLDAMQAQCAH--PD-WPTAFYMQSV 476 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~-~~~a~~~~g~ 476 (508)
..+..|..++..++|++|+..|++++...+... ..+++++|.++..+|++++|+..|++++.-. |. ..++++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 568899999999999999999998877642202 4589999999999999999999999998655 66 7789999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
++..+|+.++|...|+++++.+|.
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999998
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.3e-09 Score=102.70 Aligned_cols=102 Identities=12% Similarity=-0.003 Sum_probs=92.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCC-----cChHHHhhHHHHHHhhCCHHHHHHHHHHHHH-----hCCCcH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIM-----VSPTVYARRSLCHLFSDRSDAALLDAMQAQC-----AHPDWP 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~~ 468 (508)
+..+...|..+...|+|++|++.|++|+++.+. ....+++++|.+|..+|++++|+..+++|++ .+|..+
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 261 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP 261 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH
Confidence 556788999999999999999999999987432 1356899999999999999999999999999 789999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
.+++++|.++..+|++++|+..|++|+++.++
T Consensus 262 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998665
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.86 E-value=9.7e-09 Score=104.23 Aligned_cols=109 Identities=7% Similarity=-0.049 Sum_probs=91.0
Q ss_pred hhhhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhc-----CCCc--ChHHHhhHHHHHHhhCCHHHHHHHHHHHH
Q 010529 389 FQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINV-----NIMV--SPTVYARRSLCHLFSDRSDAALLDAMQAQ 461 (508)
Q Consensus 389 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al 461 (508)
.+.+.+.+..+.....++..+..+|+|++|+..|++++++ .|.. -+..++|+|.+|..+|+|++|+..++++|
T Consensus 299 ~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL 378 (490)
T 3n71_A 299 QEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMV 378 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3445555555666677777888999999999999999975 3330 45679999999999999999999999999
Q ss_pred HhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Q 010529 462 CAH--------PDWPTAFYMQSVALSKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 462 ~~~--------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~ 497 (508)
++. |+-+..++++|.+|..+|+|++|+..|++|+++
T Consensus 379 ~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 379 DGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 773 555778999999999999999999999999975
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.3e-09 Score=99.43 Aligned_cols=101 Identities=9% Similarity=-0.054 Sum_probs=93.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcC--------CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh-------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVN--------IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA------- 463 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------- 463 (508)
...+...|..+...|++++|+..|++++++. |. ...+++++|.+|..+|++++|+..+++++++
T Consensus 111 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 189 (311)
T 3nf1_A 111 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD-VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP 189 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 5567889999999999999999999999874 66 7788999999999999999999999999999
Q ss_pred -CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 464 -HPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 464 -~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
+|....+++.+|.+|..+|++++|+..|++++++.|+
T Consensus 190 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 190 DDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999987665
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.4e-08 Score=101.37 Aligned_cols=96 Identities=8% Similarity=-0.064 Sum_probs=80.4
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhc-----CCCc--ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh--------CCCc
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINV-----NIMV--SPTVYARRSLCHLFSDRSDAALLDAMQAQCA--------HPDW 467 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~ 467 (508)
...+......|+|++|+..|++++++ .|.. -+..++|+|.+|..+|+|++|+..|+++|++ .|+-
T Consensus 302 le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 302 IEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 33344445678999999999999974 3440 3467999999999999999999999999977 3556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCc
Q 010529 468 PTAFYMQSVALSKLDMQKDAADMLLEGAALE 498 (508)
Q Consensus 468 ~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 498 (508)
+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 382 a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 382 ASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999753
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.81 E-value=3.4e-08 Score=79.63 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=77.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|++++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|++..++..+|.++
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999998
Q ss_pred HHcC
Q 010529 479 SKLD 482 (508)
Q Consensus 479 ~~~~ 482 (508)
..+|
T Consensus 122 ~~~g 125 (125)
T 1na0_A 122 QKQG 125 (125)
T ss_dssp HHHC
T ss_pred Hhcc
Confidence 8764
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.80 E-value=4.3e-08 Score=91.75 Aligned_cols=96 Identities=11% Similarity=-0.012 Sum_probs=88.1
Q ss_pred HHHHHHhhhHHhh----hhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHH
Q 010529 399 MLEARKQGDTAFR----DKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTA 470 (508)
Q Consensus 399 ~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a 470 (508)
...+...|..+.. .+++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..|++|++++ +..+
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a 148 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--K-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDG 148 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--C-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHH
Confidence 5667888999998 99999999999999998 4 78999999999999 999999999999999987 6889
Q ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHhcCcc
Q 010529 471 FYMQSVALSK----LDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 471 ~~~~g~~~~~----~~~~~~A~~~~~~a~~~~p 499 (508)
++++|.+|.. .+++++|+.+|++|+++++
T Consensus 149 ~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 149 CTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 9999999999 9999999999999998754
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.79 E-value=1.3e-08 Score=96.25 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=70.5
Q ss_pred CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 430 IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 430 p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|. ++..++++|.+++..|++++|+..|++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+...
T Consensus 1 p~-~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 74 (281)
T 2c2l_A 1 SP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKA 74 (281)
T ss_dssp CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHH
T ss_pred Ch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHH
Confidence 45 788999999999999999999999999999999999999999999999999999999999999999988654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=3.8e-08 Score=78.46 Aligned_cols=80 Identities=10% Similarity=0.016 Sum_probs=75.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..++..++.+.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 445678899999999999999999999999999 9999999999999999999999999999999999999999998875
Q ss_pred H
Q 010529 479 S 479 (508)
Q Consensus 479 ~ 479 (508)
.
T Consensus 117 ~ 117 (118)
T 1elw_A 117 A 117 (118)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=4e-08 Score=82.14 Aligned_cols=81 Identities=17% Similarity=0.054 Sum_probs=75.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 556788999999999999999999999999999 9999999999999999999999999999999999999998888775
Q ss_pred HH
Q 010529 479 SK 480 (508)
Q Consensus 479 ~~ 480 (508)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.7e-08 Score=99.90 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=61.2
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChH------HHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPT------VYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------ 467 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 467 (508)
..+...|..++..|++++|+..|++++++.+. ... ++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 188 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 266 (406)
T 3sf4_A 188 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 266 (406)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHH
Confidence 34555566666666666666666666665544 332 56666666666666666666666666665544
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 468 PTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 468 ~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
..+++.+|.+|..+|++++|+..|++|+++.++
T Consensus 267 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 267 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 556666666666666666666666666665444
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=3.6e-08 Score=88.82 Aligned_cols=98 Identities=9% Similarity=-0.019 Sum_probs=78.0
Q ss_pred HHHHHHhhhHHhhhh----hHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCC--CcH
Q 010529 399 MLEARKQGDTAFRDK----DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHP--DWP 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p--~~~ 468 (508)
+..+...|..+.. + ++++|+..|+++++ +. ++.+++++|.+|.. .+++++|+..|++|++..| +++
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 125 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAV 125 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchH
Confidence 5567777777777 6 88888888888854 45 77888888888887 7888888888888888887 458
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHhcCcccc
Q 010529 469 TAFYMQSVALSK----LDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 469 ~a~~~~g~~~~~----~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+++++|.+|.. .+++++|+.+|++|+++ |.+
T Consensus 126 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 126 DAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp HHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 888888888888 78888888888888877 443
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.6e-08 Score=100.50 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=60.5
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChH------HHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPT------VYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------ 467 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 467 (508)
..+...|..++..|++++|+..|++++++.+. ... ++.++|.+|..+|++++|+..+++++++.+..
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 302 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVE 302 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34555566666666666666666666665554 333 56666666666666666666666666665533
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 468 PTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 468 ~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
..+++.+|.+|..+|++++|+..|++|+++.++
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 303 AQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666666666655444
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.8e-08 Score=92.37 Aligned_cols=129 Identities=14% Similarity=0.030 Sum_probs=95.5
Q ss_pred CCccc-EEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecCCCCCHHHH
Q 010529 80 EKAAN-VVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYMPNDTLAKH 156 (508)
Q Consensus 80 ~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~ 156 (508)
.|..| .||+.... ++..++||+-... ....+.+|...|+.+ .+--|+++++++.+++..++|||+++|.++.+.
T Consensus 34 ~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 34 VGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp CSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred CCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 34444 69998854 4667889986532 245788999999888 344588999999999999999999999888776
Q ss_pred hhccCCCCcChHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 010529 157 LFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG------------------------------------------------ 188 (508)
Q Consensus 157 l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~------------------------------------------------ 188 (508)
... .......+..+++..|.-||...
T Consensus 111 ~~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (272)
T 4gkh_A 111 LEE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMH 184 (272)
T ss_dssp HHH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHH
T ss_pred ccC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHH
Confidence 531 22334456667777777777521
Q ss_pred ---------CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 189 ---------RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 189 ---------~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
.++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 185 ~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 185 KLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 16899999999999987777799998765
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.74 E-value=4e-08 Score=78.80 Aligned_cols=83 Identities=13% Similarity=0.021 Sum_probs=70.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH--HHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP--TAFYMQSV 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~~g~ 476 (508)
...+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+.. .++..+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~ 97 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQV 97 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 445788999999999999999999999999999 999999999999999999999999999999998643 44444444
Q ss_pred HHHHcC
Q 010529 477 ALSKLD 482 (508)
Q Consensus 477 ~~~~~~ 482 (508)
.+..++
T Consensus 98 ~l~~l~ 103 (115)
T 2kat_A 98 FLRRLA 103 (115)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 444443
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.7e-08 Score=88.28 Aligned_cols=101 Identities=9% Similarity=-0.027 Sum_probs=92.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHh------cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh---CC----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFIN------VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA---HP---- 465 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p---- 465 (508)
+..+...|..++..|++++|+..|+++++ ..+. ...+++++|.+|..+|++++|+..+++++++ .+
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 55678899999999999999999999999 8999 9999999999999999999999999999999 33
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccc
Q 010529 466 DWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 466 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~ 500 (508)
....+++++|.++..+|++++|+..|++|+++.+.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999987554
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.73 E-value=3.2e-08 Score=97.55 Aligned_cols=100 Identities=9% Similarity=-0.115 Sum_probs=50.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc------ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCC------C
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV------SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHP------D 466 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------~ 466 (508)
+..+...|..++..|+++.|+..|++|+++.+.. .+.+++++|.+|..+|++++|++.|++|+++.+ .
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3344455555555555555555555555443210 123455555555555555555555555555422 1
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCc
Q 010529 467 WPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498 (508)
Q Consensus 467 ~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 498 (508)
.+.+++++|.+|..+|++++|+..|++|+++.
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 23355555555555555555555555555443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.71 E-value=6.1e-08 Score=87.31 Aligned_cols=100 Identities=9% Similarity=-0.112 Sum_probs=89.6
Q ss_pred HHHHHHhhhHHhh----hhhHHHHHHHHHHHHhcCC--CcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcH
Q 010529 399 MLEARKQGDTAFR----DKDFKTAIDYYSQFINVNI--MVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWP 468 (508)
Q Consensus 399 ~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~ 468 (508)
.....+.|..+.. .+++++|+..|+++++..+ . ++.+++++|.+|.. .+++++|+..|++|+++ |.++
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH-HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc-hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 4567788888887 8899999999999999998 4 58999999999999 99999999999999999 7788
Q ss_pred HHHHHHHHHHHHc-C-----CHHHHHHHHHHHhcCccc
Q 010529 469 TAFYMQSVALSKL-D-----MQKDAADMLLEGAALEEK 500 (508)
Q Consensus 469 ~a~~~~g~~~~~~-~-----~~~~A~~~~~~a~~~~p~ 500 (508)
.+++++|.+|... | ++++|+.+|++|++....
T Consensus 163 ~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 163 YAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp HHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 8999999999864 3 999999999999987554
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=91.31 Aligned_cols=74 Identities=12% Similarity=0.094 Sum_probs=65.3
Q ss_pred hcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 427 NVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 427 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
..+|. ++.+|..+|.++...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|.+|+.++|...
T Consensus 271 ~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 271 PELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp GGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred ccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 45566 6677777777778899999999999999999986 57889999999999999999999999999999764
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.9e-08 Score=94.94 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=49.9
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------H
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------P 468 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~ 468 (508)
.+...|..+...|++++|+..|++++++.+. . ..++.++|.+|..+|++++|+..+++++++.+.. .
T Consensus 225 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 303 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 303 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 3444455555555555555555555554443 2 3445555555555555555555555555554433 2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCcc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p 499 (508)
.+++.+|.+|..+|++++|+..|++|+++.+
T Consensus 304 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 334 (338)
T 3ro2_A 304 RACWSLGNAYTALGNHDQAMHFAEKHLEISR 334 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 2555555555555555555555555555544
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.4e-07 Score=76.99 Aligned_cols=83 Identities=12% Similarity=0.016 Sum_probs=72.9
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC---hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS---PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+...|.+++..|+|++|+..|+++++.+|. + +.+++++|.+|..+|++++|+..|+++++..|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 45678999999999999999999999999999 8 8889999999999999999999999999999999888776665
Q ss_pred HHHHcCC
Q 010529 477 ALSKLDM 483 (508)
Q Consensus 477 ~~~~~~~ 483 (508)
+-...++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5544443
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.68 E-value=3.8e-08 Score=80.14 Aligned_cols=69 Identities=10% Similarity=-0.059 Sum_probs=66.6
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+..|+.+|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 567899999999999999999999999999999999999999999999999999999999999999876
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-07 Score=73.73 Aligned_cols=78 Identities=17% Similarity=0.067 Sum_probs=70.2
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcC-------CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVN-------IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAF 471 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 471 (508)
+.+....|..++..|+|..|+.-|++|++.. +. ...++.++|.||.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4566789999999999999999999999863 34 678999999999999999999999999999999999998
Q ss_pred HHHHHH
Q 010529 472 YMQSVA 477 (508)
Q Consensus 472 ~~~g~~ 477 (508)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 888743
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=9e-08 Score=95.68 Aligned_cols=97 Identities=10% Similarity=-0.040 Sum_probs=81.6
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhc-----CCCc--ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC--------C
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINV-----NIMV--SPTVYARRSLCHLFSDRSDAALLDAMQAQCAH--------P 465 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p 465 (508)
.+......+..+|+|++|+..|++++++ .|.. -...+.|+|.+|..+|+|++|+..++++|++. |
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 3444455566788999999999999975 2330 34679999999999999999999999999773 4
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Q 010529 466 DWPTAFYMQSVALSKLDMQKDAADMLLEGAAL 497 (508)
Q Consensus 466 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~ 497 (508)
+-+..++++|.+|..+|+|++|+..|++|+++
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 55778999999999999999999999999975
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.7e-07 Score=76.82 Aligned_cols=91 Identities=9% Similarity=-0.088 Sum_probs=84.1
Q ss_pred hhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 405 QGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 405 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.|..+...+..++|++.|++|.+. . ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 778888888899999999999997 5 88999999999999 99999999999999987 789999999999999
Q ss_pred ----cCCHHHHHHHHHHHhcCccc
Q 010529 481 ----LDMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 481 ----~~~~~~A~~~~~~a~~~~p~ 500 (508)
.+++++|+.+|++|.++...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999987544
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=7.4e-08 Score=92.05 Aligned_cols=134 Identities=13% Similarity=0.029 Sum_probs=91.9
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCC---CCcceeeeee-eCCcceeeeecCCC
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRK---RLANLIGYCC-AGDERLLVAEYMPN 150 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~~~~~-~~~~~~lv~E~~~~ 150 (508)
+..++.|....||+. +..++||+.... .....+.+|..+|+.+.+. .|++++.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 445677888899988 345888885321 1245789999999999642 3677777774 44567899999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG------------------------------------------ 188 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~------------------------------------------ 188 (508)
.+|..... ..++..+...++.++++.|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88866321 12344455555555555555555321
Q ss_pred -----------------CceeecCCCcceeeCC---CCCe-EEcccCCccc
Q 010529 189 -----------------RPLYHDLNAYRVLFDE---DGDP-RLSCFGLMKN 218 (508)
Q Consensus 189 -----------------~iiH~Dikp~Nill~~---~~~~-kl~Dfg~a~~ 218 (508)
.++|+|++|.|||++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2589999999999987 4554 7999997653
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.2e-07 Score=92.66 Aligned_cols=80 Identities=6% Similarity=-0.032 Sum_probs=57.4
Q ss_pred cccC-CCCcccEEEEEEEc-------CCCEEEEEEecCCC---CCChhHHHHHHHHhccCC-C--CCCcceeeeeeeC--
Q 010529 75 VSES-GEKAANVVYKGRLE-------NRQWIAVKKFTKVA---WPDPTQFKEEAEGVGKLR-R--KRLANLIGYCCAG-- 138 (508)
Q Consensus 75 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~nIv~~~~~~~~~-- 138 (508)
++.| +.|....+|+.... ++..+++|+..... ......+.+|+.+++.+. + ..+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4566 78889999998864 25568888765432 112356889999998883 3 4678899887655
Q ss_pred -CcceeeeecCCCCCHH
Q 010529 139 -DERLLVAEYMPNDTLA 154 (508)
Q Consensus 139 -~~~~lv~E~~~~~sL~ 154 (508)
+..++|||+++|.++.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.7e-07 Score=94.37 Aligned_cols=102 Identities=8% Similarity=-0.079 Sum_probs=82.7
Q ss_pred HHHHHHhhhHHhh-------hhhHH-------HHHHHHHHHHh-cCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh
Q 010529 399 MLEARKQGDTAFR-------DKDFK-------TAIDYYSQFIN-VNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA 463 (508)
Q Consensus 399 ~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 463 (508)
...+...|..+.. .|+++ +|+..|++|++ +.|. +..+|+++|..+...|++++|...|++++++
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~ 350 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLAI 350 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc
Confidence 4455666666654 57766 88888999997 7888 8889999999998899999999999999998
Q ss_pred CCCcH-HHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 464 HPDWP-TAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 464 ~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+|++. .+|...|.++...|++++|++.|++|++..|.+
T Consensus 351 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 351 EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 88874 688888888888888888888888888876653
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.50 E-value=2.9e-07 Score=90.26 Aligned_cols=99 Identities=14% Similarity=-0.042 Sum_probs=87.0
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcC--------CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC-----cH
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVN--------IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD-----WP 468 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~ 468 (508)
+...|..++..|++++|+..|++++++. |. ...++.++|.+|..+|++++|+..+++++++.+. ..
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 5678889999999999999999999875 34 4567889999999999999999999999999986 35
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 469 TAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 469 ~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+++.+|.++...|++++|+..|++++++.+..
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 689999999999999999999999999886553
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.48 E-value=6.1e-07 Score=87.94 Aligned_cols=95 Identities=9% Similarity=-0.011 Sum_probs=45.2
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhc--------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC--------C
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINV--------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAH--------P 465 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p 465 (508)
+...|..++..|++++|+..|++++++ .-. .+++++|.++..+|++++|+..|++++++. |
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~ 132 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLP 132 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTST
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCc
Confidence 344445555555555555555555431 112 123445555555555555555555555443 2
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcc
Q 010529 466 DWPTAFYMQSVALSKLDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 466 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p 499 (508)
....++.++|.++..+|++++|+..|++++++.+
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 133 MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 2334444555555555555555555555554444
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.8e-07 Score=86.88 Aligned_cols=94 Identities=12% Similarity=-0.007 Sum_probs=83.3
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHH
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW--PTAFYMQSVALSK 480 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~ 480 (508)
...+..+...|+|++|.+.|+..+...|. +. +++.+|.+++..++|++|+..++.++...+.. ..+++++|.++..
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 34567788899999999999999999999 77 99999999999999999999999888764332 4699999999999
Q ss_pred cCCHHHHHHHHHHHhcCc
Q 010529 481 LDMQKDAADMLLEGAALE 498 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~ 498 (508)
+|++++|+.+|++++.-.
T Consensus 184 LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSP 201 (282)
T ss_dssp TTCHHHHHHHHHHHHTST
T ss_pred CCCHHHHHHHHHHHhcCC
Confidence 999999999999998544
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.46 E-value=5.2e-07 Score=70.95 Aligned_cols=72 Identities=14% Similarity=-0.088 Sum_probs=65.7
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAH-------PDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+.-++.+|..++..|+|..|+.-|+.|++.. +..+.++.++|.+++++|++++|+..+++|++++|.+..+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 56778999999999999999999999999863 4568899999999999999999999999999999998654
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.43 E-value=1e-06 Score=91.00 Aligned_cols=100 Identities=13% Similarity=-0.026 Sum_probs=81.2
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHH-HHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLC-HLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
.+...|......|++++|...|++|++..|. ...+|...|.+ +...|++++|...|+++++.+|+++.+|..+|..+.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 4555666667788888888888888888887 77777766654 446888999999999999999988889988888888
Q ss_pred HcCCHHHHHHHHHHHhcCcccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.+|++++|...|++|++..|.+
T Consensus 437 ~~g~~~~Ar~~~~~al~~~~~~ 458 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTSGSLP 458 (530)
T ss_dssp TTTCHHHHHHHHHHHHHSCCSC
T ss_pred hCCCHhhHHHHHHHHHhccCCC
Confidence 8899999999999998876544
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.9e-07 Score=92.45 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=87.7
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc-----C---CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC-----C
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV-----N---IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAH-----P 465 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~---p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p 465 (508)
+..+.+.|.++...|+|++|+..|+++|++ . |. -+..++|+|.+|..+|+|++|+..|++|+++. |
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~ 429 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ-LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGP 429 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 667889999999999999999999999964 3 34 45679999999999999999999999999763 4
Q ss_pred C---cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 466 D---WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 466 ~---~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+ -.+..-+++.++.++++|++|...|++|.+-.-+|+..
T Consensus 430 ~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~~~ 471 (490)
T 3n71_A 430 SHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPM 471 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4 46677889999999999999999999987655444443
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=9e-07 Score=81.38 Aligned_cols=88 Identities=10% Similarity=0.008 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHHHHhcCCCcCh--HHHhhHHHHHHhh-----CCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHH-cCC
Q 010529 413 KDFKTAIDYYSQFINVNIMVSP--TVYARRSLCHLFS-----DRSDAALLDAMQAQCAHPDW-PTAFYMQSVALSK-LDM 483 (508)
Q Consensus 413 ~~~~~A~~~~~~ai~~~p~~~~--~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~-~~~ 483 (508)
+....|...+++||+++|. .. .+|..+|..|... |+.++|.+.|++||+++|+. ..+++..|..|.. +|+
T Consensus 177 ~~l~~A~a~lerAleLDP~-~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPS-YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCC-cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 4678899999999999998 54 4999999999996 99999999999999999975 9999999999987 599
Q ss_pred HHHHHHHHHHHhcCcccc
Q 010529 484 QKDAADMLLEGAALEEKR 501 (508)
Q Consensus 484 ~~~A~~~~~~a~~~~p~~ 501 (508)
+++|.+.+++|++.+|..
T Consensus 256 ~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 256 RAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHcCCCCC
Confidence 999999999999999884
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2.3e-06 Score=84.87 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=51.2
Q ss_pred cccCCCCcccEEEEEEEc-CCCEEEEEEecCCCC-------CChhHHHHHHHHhccCCC--C-CCcceeeeeeeCCccee
Q 010529 75 VSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAW-------PDPTQFKEEAEGVGKLRR--K-RLANLIGYCCAGDERLL 143 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-nIv~~~~~~~~~~~~~l 143 (508)
+..+|.|.++.||++... +++.|+||....... ....++..|.++++.+.. + .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 567899999999999854 467899998653211 124567889999987732 3 35566654 3556789
Q ss_pred eeecCCCC
Q 010529 144 VAEYMPND 151 (508)
Q Consensus 144 v~E~~~~~ 151 (508)
|||+++|.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999863
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.4e-06 Score=87.27 Aligned_cols=96 Identities=10% Similarity=-0.040 Sum_probs=86.2
Q ss_pred HHHHHHhhhHHhhhh---hHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHHH
Q 010529 399 MLEARKQGDTAFRDK---DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTAF 471 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~ 471 (508)
...+...|..++..| ++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..|++|++.. ++.++
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~ 402 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQ 402 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHH
Confidence 455677888887644 999999999999987 5 78999999999999 899999999999999864 68999
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHhcCcc
Q 010529 472 YMQSVALSK----LDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 472 ~~~g~~~~~----~~~~~~A~~~~~~a~~~~p 499 (508)
+++|.+|.. .+++++|+.+|++|++.+|
T Consensus 403 ~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 403 VQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999999998 8999999999999999984
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.33 E-value=3.4e-06 Score=81.72 Aligned_cols=138 Identities=10% Similarity=0.068 Sum_probs=80.6
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC--CCCCcceee------eeeeCCcceeeee
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR--RKRLANLIG------YCCAGDERLLVAE 146 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~~~~------~~~~~~~~~lv~E 146 (508)
+..|+.|..+.||++...+|. +++|+... ....+..|+.++..|. .-.+++++. +....+..++|||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~-~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGA-VCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTEE-EEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCCC-EEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 445666788999999886665 88998864 2345556666666552 123445543 1224567789999
Q ss_pred cCCCCCHH-----------HH---hhcc-CCC-----------CcChHHH------------------------------
Q 010529 147 YMPNDTLA-----------KH---LFHW-EKQ-----------TIEWPLR------------------------------ 170 (508)
Q Consensus 147 ~~~~~sL~-----------~~---l~~~-~~~-----------~l~~~~~------------------------------ 170 (508)
|++|.++. .. ++.. ... ...|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 11 1110 000 0112110
Q ss_pred -HHHHHHHHHHHHHHHh------------CCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 171 -LRVAFYIAEALDYCNT------------EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 171 -~~i~~~i~~~L~~lH~------------~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
..+...+..++.+|+. ...++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666652 2238999999999999888899999998764
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.6e-06 Score=86.13 Aligned_cols=76 Identities=13% Similarity=-0.017 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHHHhcCCCcChHHHhhHHHH-H--HhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----CH
Q 010529 413 KDFKTAIDYYSQFINVNIMVSPTVYARRSLC-H--LFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLD-----MQ 484 (508)
Q Consensus 413 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~--~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~-----~~ 484 (508)
+++++|+..|+++. |. ++.+++++|.+ | ...+++++|+..|++|++.. ++.+++++|.+|. .| ++
T Consensus 231 ~d~~~A~~~~~~aa---~g-~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PG-YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GG-STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CC-CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCH
Confidence 45555555555554 44 55555555555 2 34555555555555555332 4555555555554 33 55
Q ss_pred HHHHHHHHHHh
Q 010529 485 KDAADMLLEGA 495 (508)
Q Consensus 485 ~~A~~~~~~a~ 495 (508)
++|+.+|++|+
T Consensus 304 ~~A~~~~~~Aa 314 (452)
T 3e4b_A 304 KAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 55555555555
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=4.5e-06 Score=69.26 Aligned_cols=81 Identities=19% Similarity=0.089 Sum_probs=73.0
Q ss_pred hhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHH
Q 010529 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK----LDMQKD 486 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~ 486 (508)
..+|+++|+..|+++.+.... .+. +|.+|...+..++|+..|++|.+. .++.+++++|.+|.. .+++++
T Consensus 7 ~~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 7 VKKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred CccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHH
Confidence 357899999999999998755 443 999999999999999999999997 789999999999999 899999
Q ss_pred HHHHHHHHhcCc
Q 010529 487 AADMLLEGAALE 498 (508)
Q Consensus 487 A~~~~~~a~~~~ 498 (508)
|+.+|++|.+..
T Consensus 80 A~~~~~~Aa~~g 91 (138)
T 1klx_A 80 AAQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC
Confidence 999999999763
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.4e-06 Score=64.57 Aligned_cols=68 Identities=9% Similarity=-0.053 Sum_probs=60.6
Q ss_pred HHHHHHhhhHHhhhhh---HHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc
Q 010529 399 MLEARKQGDTAFRDKD---FKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 467 (508)
+..+...|.+++..++ .++|...+++|++++|. +..+++.+|..++..|+|++|+..++++++.+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 3455667777765555 79999999999999999 99999999999999999999999999999999984
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=6.4e-06 Score=68.39 Aligned_cols=80 Identities=10% Similarity=-0.039 Sum_probs=68.5
Q ss_pred HHHHHhhhHHhhhh---hHHHHHHHHHHHHhcC-CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 400 LEARKQGDTAFRDK---DFKTAIDYYSQFINVN-IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 400 ~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
...++-|..+.+.+ ++++++..+++.++.+ |..+.+.+|++|.+|+++|+|++|+++++++|+++|++..|..-+.
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34566777777766 8889999999999999 8327899999999999999999999999999999999999877665
Q ss_pred HHHH
Q 010529 476 VALS 479 (508)
Q Consensus 476 ~~~~ 479 (508)
.+-.
T Consensus 113 ~ie~ 116 (152)
T 1pc2_A 113 LIDK 116 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.7e-06 Score=78.13 Aligned_cols=75 Identities=24% Similarity=0.306 Sum_probs=56.9
Q ss_pred ccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCC---CCCcceeeeeeeCCcceeeeecCCC
Q 010529 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR---KRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
-+..+|.|..+.||+.++.+|+.|+||+...........|..|+..|+.|.- -.+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 3567799999999999999999999998765544445578899999988832 2356666553 34799999987
Q ss_pred CC
Q 010529 151 DT 152 (508)
Q Consensus 151 ~s 152 (508)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.18 E-value=6.9e-06 Score=65.64 Aligned_cols=91 Identities=9% Similarity=0.030 Sum_probs=78.4
Q ss_pred hhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHH---HHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCCHHHH
Q 010529 413 KDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDA---ALLDAMQAQCAH-P-DWPTAFYMQSVALSKLDMQKDA 487 (508)
Q Consensus 413 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~A 487 (508)
.....+.+.|.+++..++. ....-++.|.++.+..+... +|..++..+.-+ | ...+..|.+|..++++|+|++|
T Consensus 15 ~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A 93 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHH
Confidence 3456667778888887877 89999999999999888777 999999988887 5 6788999999999999999999
Q ss_pred HHHHHHHhcCccccccc
Q 010529 488 ADMLLEGAALEEKRQRG 504 (508)
Q Consensus 488 ~~~~~~a~~~~p~~~~~ 504 (508)
+++++..|+++|.|.-+
T Consensus 94 ~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCCCHHH
Confidence 99999999999998543
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.3e-05 Score=81.70 Aligned_cols=96 Identities=9% Similarity=-0.102 Sum_probs=85.8
Q ss_pred HHHHHHHhhhHHhh----hhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHH
Q 010529 398 DMLEARKQGDTAFR----DKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPT 469 (508)
Q Consensus 398 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 469 (508)
++..+...|..+.. .+++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..|++|++. +++.
T Consensus 74 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~ 148 (490)
T 2xm6_A 74 YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDS 148 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHH
Confidence 36678889999988 89999999999999875 4 78999999999999 89999999999999876 5789
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHhcCc
Q 010529 470 AFYMQSVALSK----LDMQKDAADMLLEGAALE 498 (508)
Q Consensus 470 a~~~~g~~~~~----~~~~~~A~~~~~~a~~~~ 498 (508)
+++++|.+|.. .+++++|+++|++|++.+
T Consensus 149 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 149 GQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999999998 899999999999999764
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.11 E-value=1e-05 Score=76.94 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=60.1
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC---CCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR---RKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
+..|+.|....+|+.... +..++||+.... ....+..|...|+.|. ...+++++.++...+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 456789999999999864 556888987543 2567899999998883 367889999988788899999999987
Q ss_pred CH
Q 010529 152 TL 153 (508)
Q Consensus 152 sL 153 (508)
++
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-05 Score=88.60 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=74.2
Q ss_pred hhHHhhhhhHHHHHHHHHHH--------------------HhcC--CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh
Q 010529 406 GDTAFRDKDFKTAIDYYSQF--------------------INVN--IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCA 463 (508)
Q Consensus 406 g~~~~~~~~~~~A~~~~~~a--------------------i~~~--p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 463 (508)
|..+...|.|++|...|+++ ++.. .. .+.+|+++|.++...|++++|+..|.+|
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 66666666666666655544 2222 45 7889999999999999999999999886
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 464 HPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 464 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+++.+|++.|.++..+|+|++|+++|..|.+.+++.
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES 1167 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc
Confidence 889999999999999999999999999999888653
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.5e-05 Score=80.38 Aligned_cols=93 Identities=14% Similarity=-0.051 Sum_probs=81.1
Q ss_pred HHHHHHhhhH-H--hhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhC-----CHHHHHHHHHHHHHhCCCcHHH
Q 010529 399 MLEARKQGDT-A--FRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSD-----RSDAALLDAMQAQCAHPDWPTA 470 (508)
Q Consensus 399 ~~~~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~~~p~~~~a 470 (508)
...+.+.|.. + ...+++++|+..|+++++. . ++.+++++|.+|. .| ++++|+..|++|+ +.++.+
T Consensus 248 ~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A 320 (452)
T 3e4b_A 248 PASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--D-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAA 320 (452)
T ss_dssp THHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHH
Confidence 4566777877 4 5788999999999999965 4 7899999999998 66 9999999999999 999999
Q ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHhcCc
Q 010529 471 FYMQSVALSK----LDMQKDAADMLLEGAALE 498 (508)
Q Consensus 471 ~~~~g~~~~~----~~~~~~A~~~~~~a~~~~ 498 (508)
++++|.+|.. ..++++|+.+|++|.+..
T Consensus 321 ~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 321 DYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 9999998887 459999999999999754
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.6e-05 Score=79.36 Aligned_cols=96 Identities=9% Similarity=0.003 Sum_probs=72.5
Q ss_pred hhHHhhhhhHHHHHHHHHHHHhcCCCc-----ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh------CCCcHHHHHHH
Q 010529 406 GDTAFRDKDFKTAIDYYSQFINVNIMV-----SPTVYARRSLCHLFSDRSDAALLDAMQAQCA------HPDWPTAFYMQ 474 (508)
Q Consensus 406 g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~a~~~~ 474 (508)
|......|+++.|+..|++++...+.. .+.++.++|.+|..+|+|++|+..++.++.. .+....++...
T Consensus 102 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
T 4b4t_Q 102 EKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLE 181 (434)
T ss_dssp HHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 333444556666666666665443220 3567889999999999999999999998876 45567899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 475 SVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 475 g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
|.+|..+|+|++|...|++|+.+.+..
T Consensus 182 ~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 182 SKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999998776543
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=7.3e-05 Score=71.59 Aligned_cols=160 Identities=14% Similarity=0.118 Sum_probs=91.6
Q ss_pred ccccCHHHHHHHhcCCCccc--ccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCC--CCc
Q 010529 54 FSEFSFLDLRAATNNFSSDN--IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRK--RLA 129 (508)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~--~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv 129 (508)
+..++..++......|.-.. -++.|+.|....+|++...+++ +++|...... ....+..|+.++..|... .++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~-~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCcc-EEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 34567777777776665322 2556777888999999987775 7899886531 234677788888777321 234
Q ss_pred ceeee------eeeCCcceeeeecCCCCCHHH-----------H---hhcc-CC---C---Cc---ChHHHHH-------
Q 010529 130 NLIGY------CCAGDERLLVAEYMPNDTLAK-----------H---LFHW-EK---Q---TI---EWPLRLR------- 172 (508)
Q Consensus 130 ~~~~~------~~~~~~~~lv~E~~~~~sL~~-----------~---l~~~-~~---~---~l---~~~~~~~------- 172 (508)
+++.. ....+..++||+|++|.++.. . ++.. .. . .. .|...+.
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44432 122356789999999865321 0 1110 00 0 00 1111000
Q ss_pred -----HHHHHHHHHHHHHh-------CCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 173 -----VAFYIAEALDYCNT-------EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 173 -----i~~~i~~~L~~lH~-------~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
+...+...+..++. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344555542 23 8999999999999877666899998764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.96 E-value=2.8e-05 Score=85.87 Aligned_cols=90 Identities=12% Similarity=-0.031 Sum_probs=72.8
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-----------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW----------- 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----------- 467 (508)
...|.+.|.++...|++++|+++|.+| + ++..|.+.|.++.++|+|++|++.+..|++..++.
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYA 1178 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALA 1178 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHH
Confidence 566888999999999999999999886 6 89999999999999999999999998888666431
Q ss_pred ----------------HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010529 468 ----------------PTAFYMQSVALSKLDMQKDAADMLLEG 494 (508)
Q Consensus 468 ----------------~~a~~~~g~~~~~~~~~~~A~~~~~~a 494 (508)
...|++.|..++..|+|++|+..|.+|
T Consensus 1179 Kl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1179 KTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred hhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 234566777777777777777777665
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.94 E-value=5e-05 Score=75.78 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=46.5
Q ss_pred ccccCCCCcccEEEEEEEcCCCEEEEEEecCCC----C-----CChhHHHHHHHHhcc-CCCCCCcceeeeeeeCCccee
Q 010529 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVA----W-----PDPTQFKEEAEGVGK-LRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~-----~~~~~~~~E~~~l~~-l~h~nIv~~~~~~~~~~~~~l 143 (508)
-+..+|.|..+.||++.. ++..++||...... . .....+..|+..+.. .....+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 356789999999999975 45679999432211 1 122234444333221 2335677888775 567899
Q ss_pred eeecC-CC
Q 010529 144 VAEYM-PN 150 (508)
Q Consensus 144 v~E~~-~~ 150 (508)
||||+ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.92 E-value=7.9e-05 Score=62.21 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=76.3
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh---------HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCC------
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP---------TVYARRSLCHLFSDRSDAALLDAMQAQCAHP------ 465 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------ 465 (508)
.++.+...++..|.|+.|+-.++.++.+... +. .++...|.+++..++|..|...|++||.+.-
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~-~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-NPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-CcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3566777788999999999999998876544 33 3789999999999999999999999975531
Q ss_pred -------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010529 466 -------------------DWPTAFYMQSVALSKLDMQKDAADMLLE 493 (508)
Q Consensus 466 -------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 493 (508)
.+.+.-|+.|.||.+++++++|+..++.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236789999999999999999999875
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.90 E-value=5.7e-05 Score=66.33 Aligned_cols=142 Identities=14% Similarity=0.051 Sum_probs=91.0
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCccccCCC
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA 230 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~ 230 (508)
-||.++|.. .+.+++++++|.++.|.+.+|.-+-....-..+=+.|..|++..+|.|.+.+ +.+. .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~~~~ 102 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------AGEPP 102 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------ccccC
Confidence 478898864 5779999999999999999988762211012233457899999999998764 1111 12335
Q ss_pred CCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhccc--
Q 010529 231 YTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY-- 308 (508)
Q Consensus 231 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~-- 308 (508)
+.+||... ...+.+.-|||||++||..+.-..+... +...++++.+||..|...
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e-----------------------E~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE-----------------------ERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE-----------------------EECCCHHHHHHHHHHTTCCC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc-----------------------chhhCHHHHHHHHHHHhccc
Confidence 67888763 3445677899999999999988755321 112344566666666644
Q ss_pred -----------------------CCCCCCChHHHHHHHHHh
Q 010529 309 -----------------------EPRERPSTKNLVVTLARL 326 (508)
Q Consensus 309 -----------------------~p~~Rps~~~il~~L~~~ 326 (508)
.+..|+++.+|++.-..-
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~h 199 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAH 199 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHHHHTT
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHHHHhh
Confidence 346778898888765443
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.87 E-value=2.5e-05 Score=77.93 Aligned_cols=98 Identities=7% Similarity=-0.024 Sum_probs=72.6
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh-----------------HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCC
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP-----------------TVYARRSLCHLFSDRSDAALLDAMQAQCAHP 465 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 465 (508)
..+|..+...|+|++|++.|.++++.+|. .. .++.++|.+|..+|++++|++.+.+++++.+
T Consensus 8 l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 8 LEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 45677778888888888888888888776 33 2477888888888888888888888888766
Q ss_pred CcHH------HHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 466 DWPT------AFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 466 ~~~~------a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
...+ ++..+|.++...|++++|+..++++++..++.
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 87 QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 5433 34455666667777777777777777665554
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.86 E-value=9.9e-05 Score=69.42 Aligned_cols=98 Identities=8% Similarity=-0.140 Sum_probs=63.6
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCC--CcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC----cHHHHHHH-
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNI--MVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD----WPTAFYMQ- 474 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~----~~~a~~~~- 474 (508)
....|.++...|++++|++.+.+.|..+| . +.+++...+.+|+++|+.+.|.+.+++..+.+|+ +-.....+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 35666777777777777777777777775 5 6677777777777777777777777777777772 11222333
Q ss_pred -HHHHHHcC--CHHHHHHHHHHHhcCccc
Q 010529 475 -SVALSKLD--MQKDAADMLLEGAALEEK 500 (508)
Q Consensus 475 -g~~~~~~~--~~~~A~~~~~~a~~~~p~ 500 (508)
|.+....| ++.+|...|+++.+..|.
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 33344444 677777777776665554
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00012 Score=70.37 Aligned_cols=78 Identities=10% Similarity=0.013 Sum_probs=42.6
Q ss_pred cccCCCCcccE-EEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC--CCCCcceeeeeeeCCcceeeeecCCCC
Q 010529 75 VSESGEKAANV-VYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDERLLVAEYMPND 151 (508)
Q Consensus 75 ~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~lv~E~~~~~ 151 (508)
+..|+.|.... +|+....++..+++|...... ...+..|+.++..+. .-.+++++.+.... -++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 34555555544 667765446667777654322 134566777777763 23466777764333 37899999776
Q ss_pred CHHHHh
Q 010529 152 TLAKHL 157 (508)
Q Consensus 152 sL~~~l 157 (508)
++.+++
T Consensus 98 ~l~~~l 103 (333)
T 3csv_A 98 LFTEVI 103 (333)
T ss_dssp BHHHHH
T ss_pred chHHHh
Confidence 665443
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.78 E-value=3.9e-05 Score=75.61 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=74.6
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+..+...|..+...|+|++|+++|.+| . ++..|...+.++...|+++.|...... |..+|+. ...+..
T Consensus 146 ~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~ 215 (449)
T 1b89_A 146 NNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELIN 215 (449)
T ss_dssp HHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHH
T ss_pred HHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHH
Confidence 34456677888888888999999988888 4 678888888888888888888665553 4455555 335778
Q ss_pred HHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+|..+|++++|+..|++|+.+++..
T Consensus 216 ~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 216 YYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred HHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 8999999999999999999998654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00031 Score=67.40 Aligned_cols=97 Identities=15% Similarity=0.049 Sum_probs=61.1
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCC--CCCc
Q 010529 54 FSEFSFLDLRAATNNFSSD--NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR--KRLA 129 (508)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~--~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv 129 (508)
+..++...+......|.-. .-+..++ |....||++...+|+.+++|...... .....+..|..++..+.. -.++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 4556666666555444321 1233456 77889999887777679999986432 235677888888888732 2245
Q ss_pred ceeee-----eeeCCcceeeeecCCCCC
Q 010529 130 NLIGY-----CCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 130 ~~~~~-----~~~~~~~~lv~E~~~~~s 152 (508)
+++.. ....+..++||++++|.+
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~ 113 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQ 113 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCC
Confidence 55543 122445678999998754
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00021 Score=65.81 Aligned_cols=79 Identities=8% Similarity=-0.052 Sum_probs=65.5
Q ss_pred HHHHH-hcCCCcChHHHhhHHHHHHh-----------hCCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHc-----C
Q 010529 422 YSQFI-NVNIMVSPTVYARRSLCHLF-----------SDRSDAALLDAMQAQCAHPD--WPTAFYMQSVALSKL-----D 482 (508)
Q Consensus 422 ~~~ai-~~~p~~~~~~~~~~a~~~~~-----------~~~~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~~~-----~ 482 (508)
+.+++ +.+|. +.++++..|.+... ++....|...+++|+++||+ +..+|.-+|..|... |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 34444 56777 88888888877744 22347899999999999999 566999999999995 9
Q ss_pred CHHHHHHHHHHHhcCcccc
Q 010529 483 MQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 483 ~~~~A~~~~~~a~~~~p~~ 501 (508)
+.++|.++|++|++++|.+
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999965
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00017 Score=70.45 Aligned_cols=138 Identities=13% Similarity=0.127 Sum_probs=82.1
Q ss_pred cccCCCCcccEEEEEEEcC--------CCEEEEEEecCCCCCChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeee
Q 010529 75 VSESGEKAANVVYKGRLEN--------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~ 145 (508)
+..+..|-...+|++...+ +..+++|+.... ......+.+|..+++.|. +.-.+++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 4567778889999998642 467899986332 234566779999998883 3334677777643 2999
Q ss_pred ecCCCCCHHHH--------------hh---ccC---CCCcC--hHHHHHHHHHHHH-------------------HHHHH
Q 010529 146 EYMPNDTLAKH--------------LF---HWE---KQTIE--WPLRLRVAFYIAE-------------------ALDYC 184 (508)
Q Consensus 146 E~~~~~sL~~~--------------l~---~~~---~~~l~--~~~~~~i~~~i~~-------------------~L~~l 184 (508)
||++|.+|..- |. ... ..... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 11 000 11111 3455555544322 12333
Q ss_pred H----hCC---CceeecCCCcceeeCCC----CCeEEcccCCcc
Q 010529 185 N----TEG---RPLYHDLNAYRVLFDED----GDPRLSCFGLMK 217 (508)
Q Consensus 185 H----~~~---~iiH~Dikp~Nill~~~----~~~kl~Dfg~a~ 217 (508)
. ..+ .++|+|+.+.||+++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 221 37999999999999876 789999997664
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00015 Score=72.42 Aligned_cols=73 Identities=16% Similarity=0.248 Sum_probs=51.0
Q ss_pred cccCCCCcccEEEEEEEcC--------CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCC-CcceeeeeeeCCcceeee
Q 010529 75 VSESGEKAANVVYKGRLEN--------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR-LANLIGYCCAGDERLLVA 145 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~~~~~~~~~~~~~lv~ 145 (508)
+..|+.|....||++...+ +..+++|+.... .....+..|..+++.|...+ .+++++.+.+ .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999999753 467889987432 11256778999998884333 4677776532 3899
Q ss_pred ecCCCCCH
Q 010529 146 EYMPNDTL 153 (508)
Q Consensus 146 E~~~~~sL 153 (508)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0003 Score=66.18 Aligned_cols=98 Identities=8% Similarity=-0.006 Sum_probs=77.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCC---cChHHHhhH--HHHHHhhC--CHHHHHHHHHHHHHhCCCc--HH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIM---VSPTVYARR--SLCHLFSD--RSDAALLDAMQAQCAHPDW--PT 469 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~--a~~~~~~~--~~~~A~~~~~~al~~~p~~--~~ 469 (508)
.......+.++...|+.+.|...++++.+.+|+ .+-.+..++ |.+.+..| ++.+|+..|+++.+..|++ ..
T Consensus 136 lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~ 215 (310)
T 3mv2_B 136 TELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQL 215 (310)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHH
Confidence 444566778889999999999999999999991 012333444 44467667 9999999999999888883 44
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhcCcc
Q 010529 470 AFYMQSVALSKLDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 470 a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p 499 (508)
.+++ ++..+|+|++|...++.++++.|
T Consensus 216 lLln---~~~~~g~~~eAe~~L~~l~~~~p 242 (310)
T 3mv2_B 216 GLLN---LHLQQRNIAEAQGIVELLLSDYY 242 (310)
T ss_dssp HHHH---HHHHHTCHHHHHHHHHHHHSHHH
T ss_pred HHHH---HHHHcCCHHHHHHHHHHHHHhcc
Confidence 5555 89999999999999998888743
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00021 Score=67.66 Aligned_cols=71 Identities=13% Similarity=0.118 Sum_probs=45.7
Q ss_pred cccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCC-cceeeeeeeCCcceeeeecC-CCCC
Q 010529 75 VSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRL-ANLIGYCCAGDERLLVAEYM-PNDT 152 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~~~~~~~~~~~lv~E~~-~~~s 152 (508)
+..|+.|....+|++ ..+++|+...... ..-...+|+.+++.+...++ +++++++ .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 567788999999999 3488898764321 11234578888877732233 5666554 44457999999 7655
Q ss_pred H
Q 010529 153 L 153 (508)
Q Consensus 153 L 153 (508)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.53 E-value=6e-05 Score=74.25 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=64.5
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
.+...|+.++..|+|++|...|+++ ..|..+|.|+.++|+|++|++.|.+| +++..|...+.++..
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHH
Confidence 6788999999999999999999977 46889999999999999999999999 578999999999999
Q ss_pred cCCHHHHHHHHHHHhcCcccc
Q 010529 481 LDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~ 501 (508)
.|+++.|..+... |.++|++
T Consensus 190 ~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 190 GKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp TTCHHHHHHTTTT-TTTCHHH
T ss_pred cCcHHHHHHHHHH-HHhCHhh
Confidence 9999999887775 4466653
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00074 Score=54.01 Aligned_cols=70 Identities=9% Similarity=-0.084 Sum_probs=45.2
Q ss_pred ChHHHhhHHHHHHhhCCH---HHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 433 SPTVYARRSLCHLFSDRS---DAALLDAMQAQCAHP-DWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.+..-++.|.|+.+..+. .++|..++..++.+| ...+.+|.+|..++++|+|++|+++.+..|+++|.|.
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH
Confidence 456666666666665543 356666666666666 3456666677777777777777777777777777664
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00017 Score=71.95 Aligned_cols=83 Identities=7% Similarity=-0.048 Sum_probs=67.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc--------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC-----C
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV--------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAH-----P 465 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p 465 (508)
+..+.+.|.++...|+|++|+..|+++|++ .|. -+..++|+|.+|..+|++++|+..|++|+++- |
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~ 407 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGR 407 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 566788899999999999999999999964 333 45679999999999999999999999999772 4
Q ss_pred Cc---HHHHHHHHHHHHHcC
Q 010529 466 DW---PTAFYMQSVALSKLD 482 (508)
Q Consensus 466 ~~---~~a~~~~g~~~~~~~ 482 (508)
++ .+.+.+++.+...++
T Consensus 408 ~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 408 EHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHh
Confidence 44 556677777766543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00026 Score=67.92 Aligned_cols=76 Identities=9% Similarity=0.005 Sum_probs=64.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
+..+...+..++..|++++|+..+++|+.++|. +.+|..+|.++...|++++|++.|.+|+.++|....-++..+.
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~l 352 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENG 352 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhCc
Confidence 344556777778889999999999999999965 7889999999999999999999999999999998654443333
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0014 Score=53.10 Aligned_cols=70 Identities=9% Similarity=-0.084 Sum_probs=47.8
Q ss_pred ChHHHhhHHHHHHhhCCH---HHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 433 SPTVYARRSLCHLFSDRS---DAALLDAMQAQCAHP-DWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.....++.|.|+.+..+. .++|..++..+..+| ..-+..|.+|..++++|+|++|.++.+..|+++|.|.
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 466666777777666554 357777777777666 3556677777777777777777777777777777664
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00048 Score=69.09 Aligned_cols=74 Identities=11% Similarity=0.089 Sum_probs=48.0
Q ss_pred cccCCCCcccEEEEEEEcC-CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCC-cceeeeeeeCCcceeeeecCCCCC
Q 010529 75 VSESGEKAANVVYKGRLEN-RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRL-ANLIGYCCAGDERLLVAEYMPNDT 152 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~~~~~~~~~~~lv~E~~~~~s 152 (508)
+..|+.|-...+|++...+ +..+++|+..... ...-...+|..++..|...++ +++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3456778889999999765 4668888874432 111123688999988854444 57777763 2 36999999754
Q ss_pred H
Q 010529 153 L 153 (508)
Q Consensus 153 L 153 (508)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00024 Score=70.67 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=60.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhc--------CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhC-----C
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINV--------NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAH-----P 465 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p 465 (508)
+..+.+.|.++...|+|++|+..|+++|++ .|. -+..++|+|.+|..+|+|++|+..|++|+++- |
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~ 418 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGK 418 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCC
Confidence 567788999999999999999999999964 344 55679999999999999999999999999873 5
Q ss_pred CcHH
Q 010529 466 DWPT 469 (508)
Q Consensus 466 ~~~~ 469 (508)
+++.
T Consensus 419 ~Hp~ 422 (433)
T 3qww_A 419 DHPY 422 (433)
T ss_dssp TCHH
T ss_pred CChH
Confidence 6544
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00052 Score=67.03 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=45.6
Q ss_pred cccCCCCcccEEEEEEEcC---------CCEEEEEEecCCCCCChhHHHHHHHHhccCCCCC-CcceeeeeeeCCcceee
Q 010529 75 VSESGEKAANVVYKGRLEN---------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR-LANLIGYCCAGDERLLV 144 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~~~~~~~~~~~~~lv 144 (508)
+..++.|....+|++...+ +..+++|+..... ........|..+++.+...+ ++++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4567888889999998654 2578888765422 11113467888888884333 45777554 2 3689
Q ss_pred eecCCCCCH
Q 010529 145 AEYMPNDTL 153 (508)
Q Consensus 145 ~E~~~~~sL 153 (508)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999998543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0014 Score=63.23 Aligned_cols=68 Identities=10% Similarity=0.003 Sum_probs=44.1
Q ss_pred CCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC---CCCCcceeee------eeeCCcceeeeecCC
Q 010529 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR---RKRLANLIGY------CCAGDERLLVAEYMP 149 (508)
Q Consensus 79 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~------~~~~~~~~lv~E~~~ 149 (508)
|.|....||++...+| .+++|+...... ..|+.++..|. -|++++++.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444689999997777 799998765431 34555555552 2335555543 223466789999999
Q ss_pred CCCH
Q 010529 150 NDTL 153 (508)
Q Consensus 150 ~~sL 153 (508)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0026 Score=50.71 Aligned_cols=76 Identities=9% Similarity=-0.035 Sum_probs=60.7
Q ss_pred HHhhhHHhhhh---hHHHHHHHHHHHHhcC-CCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 403 RKQGDTAFRDK---DFKTAIDYYSQFINVN-IMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 403 ~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
++.|..+.... +..++|..++..+..+ |...-+..+.+|..++++|+|++|+.+++..|+++|++..|.--+..+-
T Consensus 39 F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 39 FEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 44455554444 4455999999999887 6227889999999999999999999999999999999998876655443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 508 | ||||
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 9e-39 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-37 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-37 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-37 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-36 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-35 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-34 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 8e-34 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-32 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-32 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-32 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 9e-32 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-31 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-31 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-31 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 9e-31 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-30 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-30 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-30 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 4e-30 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-30 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-29 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-29 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 9e-29 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-28 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-28 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-28 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-28 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-27 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 7e-27 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-26 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-26 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-25 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-25 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-25 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-24 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-24 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 6e-24 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-24 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-23 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-22 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-22 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-20 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 5e-20 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 5e-20 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-20 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-19 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-19 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-19 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-19 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-18 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-18 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-17 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-17 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-17 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 6e-16 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-14 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-13 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 4e-13 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-12 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 8e-11 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 2e-05 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-04 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (352), Expect = 9e-39
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 12/260 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
V E G +V+ G N+ +A+K + A + F EEAE + KL +L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 66
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C LV E+M + L+ + ++ L + + E + Y ++
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIH 124
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L E+ ++S FG+ + +D + S+ + + PE R +S
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
++SFG ++ ++ S IP + + + + + +T V + + C +
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRLYKPRLASTHVYQIMNHCWK 240
Query: 308 YEPRERPSTKNLVVTLARLQ 327
P +RP+ L+ LA +
Sbjct: 241 ERPEDRPAFSRLLRQLAEIA 260
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (342), Expect = 3e-37
Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 12/256 (4%)
Query: 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ E G VV G+ + +A+K + + + +F EEA+ + L ++L L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 65
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C ++ EYM N L +L + + L + + EA++Y ++ L+
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LH 123
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESV 247
DL A L ++ G ++S FGL + +D + S+ + ++PPE L + +S
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
I++FG ++ ++ S +P + + L + +V + C
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 239
Query: 308 YEPRERPSTKNLVVTL 323
+ ERP+ K L+ +
Sbjct: 240 EKADERPTFKILLSNI 255
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 137 bits (345), Expect = 3e-37
Identities = 53/290 (18%), Positives = 106/290 (36%), Gaps = 26/290 (8%)
Query: 57 FSFLDLRAATNNFSSDNIVSES------GEKAANVVYKGRL----ENRQWIAVKKFTKVA 106
F+F D A F+ + +S G V G L + ++A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 107 WPDPT-QFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTI 165
F EA +G+ + +L G +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 166 EWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSY 225
+ + IA + Y ++ DL A +L + + ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 226 STN---------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE 276
T + +T PE ++ + S ++S+G V+ +++S P + +
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 277 NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
++ ++ + + + L C Q + RP +V TL ++
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (339), Expect = 8e-37
Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 16/249 (6%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL-L 143
V G + +AVK A F EA + +LR L L+G L +
Sbjct: 22 DVMLGDYRGNK-VAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203
V EYM +L +L + + L+ + + EA++Y ++ DL A VL
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVS 137
Query: 204 EDGDPRLSCFGLMKN-SMDGKSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK 262
ED ++S FGL K S + + +T PE L+ + +S ++SFG +L ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 263 HIPPSHALDMIRGENLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+P L ++ +G V + C + RPS L
Sbjct: 198 RVPYP-------RIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 250
Query: 320 VVTLARLQT 328
L ++T
Sbjct: 251 REQLEHIKT 259
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 133 bits (336), Expect = 3e-36
Identities = 53/265 (20%), Positives = 109/265 (41%), Gaps = 12/265 (4%)
Query: 79 GEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCA 137
G VY+G + +AVK + + +F +EA + +++ L L+G C
Sbjct: 26 GGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNA 197
++ E+M L +L +Q + + L +A I+ A++Y + ++ DL A
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAA 143
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYST-----NLAYTPPEYLKNGRVIPESVIYSFG 252
L E+ +++ FGL + + + +T PE L + +S +++FG
Sbjct: 144 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 203
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L ++ + P +D+ + L++ + +V L C Q+ P +
Sbjct: 204 VLLWEIATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 259
Query: 313 RPSTKNLVVTLARLQTKSDVPSNVM 337
RPS + + +S + V
Sbjct: 260 RPSFAEIHQAFETMFQESSISDEVE 284
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 2e-35
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 12/260 (4%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V+ G +A+K P F +EA+ + KLR ++L L
Sbjct: 26 GQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-E 83
Query: 139 DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAY 198
+ +V EYM +L L + + P + +A IA + Y ++ DL A
Sbjct: 84 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAA 142
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGT 253
+L E+ +++ FGL + D + + + +T PE GR +S ++SFG
Sbjct: 143 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 202
Query: 254 VLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRER 313
+L +L + +P ++ + ++ E + L QC + EP ER
Sbjct: 203 LLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 258
Query: 314 PSTKNLVVTLARLQTKSDVP 333
P+ + L L T ++
Sbjct: 259 PTFEYLQAFLEDYFTSTEPQ 278
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 4e-34
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 12/252 (4%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
V+ G +AVK + + P F EA + +L+ +RL L + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII 85
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204
EYM N +L L + L +A IAE + + ++ DL A +L +
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 144
Query: 205 DGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTVLLDLL 259
+++ FGL + D + + + +T PE + G +S ++SFG +L +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 260 SGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ IP + +NL E + L C + P +RP+ L
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYL 260
Query: 320 VVTLARLQTKSD 331
L T ++
Sbjct: 261 RSVLEDFFTATE 272
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 8e-34
Identities = 49/256 (19%), Positives = 98/256 (38%), Gaps = 20/256 (7%)
Query: 85 VVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144
VYKG+ + + T FK E + K R + +GY + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIV 81
Query: 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204
++ +L HL H + E + +A A+ +DY + + ++ DL + + E
Sbjct: 82 TQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHE 139
Query: 205 DGDPRLSCFGLMKNSMDGKSYST------NLAYTPPEYLK---NGRVIPESVIYSFGTVL 255
D ++ FGL ++ + PE ++ +S +Y+FG VL
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 256 LDLLSGK----HIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311
+L++G+ +I + + G S + + L ++CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA----MKRLMAECLKKKRD 255
Query: 312 ERPSTKNLVVTLARLQ 327
ERP ++ ++ L
Sbjct: 256 ERPLFPQILASIELLA 271
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 1e-32
Identities = 52/302 (17%), Positives = 105/302 (34%), Gaps = 49/302 (16%)
Query: 60 LDLRAATNNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP-DPTQFKEEA 117
++L+ ++F +SE G VV+K + +A K P Q E
Sbjct: 1 MELK--DDDFE---KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 55
Query: 118 EGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYI 177
+ + + + G + E + E+M +L + L + I + +V+ +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV 113
Query: 178 AEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPE 235
+ L Y + + ++ D+ +L + G+ +L FG+ +D + S +Y PE
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 173
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKH-------------------------------- 263
L+ +S I+S G L+++ G++
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 264 ------IPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTK 317
M E L+ +++ S + + ++CL P ER K
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 293
Query: 318 NL 319
L
Sbjct: 294 QL 295
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 4e-32
Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 27/266 (10%)
Query: 68 NFSSDN--IVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPT---QFKEEAEGVG 121
++ ++ I G+ VY R +++ +A+K K Q + E E
Sbjct: 2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 61
Query: 122 KLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEAL 181
LR + L GY L+ EY P T+ + L K + +A AL
Sbjct: 62 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 119
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--LAYTPPEYLKN 239
YC+++ ++ D+ +L G+ +++ FG ++ + + L Y PPE ++
Sbjct: 120 SYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 178
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEE 294
+ ++S G + + L GK PP +F+ +E
Sbjct: 179 RMHDEKVDLWSLGVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFPDFVTEG 230
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLV 320
A ++ S+ L++ P +RP + ++
Sbjct: 231 ARDLI---SRLLKHNPSQRPMLREVL 253
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 5e-32
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 42/310 (13%)
Query: 55 SEFSFLDLRAATNNFSSDNIVSESGEKAANVVYKGRLEN---RQWIAVKKFTKVAWPDPT 111
+ + LD N+ +++ GE V K R++ R A+K+ + A D
Sbjct: 2 TIYPVLDW----NDIKFQDVI---GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH 54
Query: 112 Q-FKEEAEGVGKLRRKR-LANLIGYCCAGDERLLVAEYMPNDTLAKHL------------ 157
+ F E E + KL + NL+G C L EY P+ L L
Sbjct: 55 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 114
Query: 158 --FHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215
+ T+ L A +A +DY + + ++ DL A +L E+ +++ FGL
Sbjct: 115 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGL 173
Query: 216 MKNSMDGKSYSTN---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDM 272
+ + + + E L S ++S+G +L +++S P
Sbjct: 174 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY------ 227
Query: 273 IRGENLNLLMDSHLEG---KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARL--Q 327
G L + +G + +V L QC + +P ERPS ++V+L R+ +
Sbjct: 228 -CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286
Query: 328 TKSDVPSNVM 337
K+ V + +
Sbjct: 287 RKTYVNTTLY 296
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 9e-32
Identities = 48/295 (16%), Positives = 103/295 (34%), Gaps = 46/295 (15%)
Query: 79 GEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG 138
G+ V++G+ + +AVK F+ + E LR + + I
Sbjct: 12 GKGRFGEVWRGKWRGEE-VAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 139 D----ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG------ 188
+ + LV++Y + +L +L + T+ +++A A L + + E
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 189 RPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST--------NLAYTPPEYL-- 237
+ H DL + +L ++G ++ GL Y PE L
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186
Query: 238 ----KNGRVIPESVIYSFGTVLLDLLSGKHIPPSH---------------ALDMIRGENL 278
K+ + IY+ G V ++ I H +++ +R
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246
Query: 279 NLLMDSHLEGKFSSEEATQ-VVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDV 332
+ ++ ++ S EA + + + +C R + + TL++L + +
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 120 bits (303), Expect = 2e-31
Identities = 50/249 (20%), Positives = 88/249 (35%), Gaps = 14/249 (5%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLANLIGY 134
G + VY R + N + +A+KK + +E + KLR G
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 83
Query: 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHD 194
LV EY H K+ ++ V + L Y ++ ++ D
Sbjct: 84 YLREHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRD 140
Query: 195 LNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYL---KNGRVIPESVIYSF 251
+ A +L E G +L FG S+ + PE + G+ + ++S
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311
G ++L K P + M ++ L+ SE CLQ P+
Sbjct: 201 GITCIELAERKP-PLFNMNAMSALYHIAQNESPALQSGHWSEYFRN---FVDSCLQKIPQ 256
Query: 312 ERPSTKNLV 320
+RP+++ L+
Sbjct: 257 DRPTSEVLL 265
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 4e-31
Identities = 54/269 (20%), Positives = 96/269 (35%), Gaps = 32/269 (11%)
Query: 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLA 129
++ G + K R + + + K+ + + E + +L+ +
Sbjct: 7 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 66
Query: 130 NLIGYCCAGDERLL--VAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYC- 184
L V EY LA + E+Q ++ LRV + AL C
Sbjct: 67 RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126
Query: 185 --NTEGRPLYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTP----PEYL 237
+ G + H DL V D + +L FGL + S++ TP PE +
Sbjct: 127 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 186
Query: 238 KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS------ 291
+S I+S G +L +L + PP + L EGKF
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELCALM--PPFT------AFSQKELAGKIREGKFRRIPYRY 238
Query: 292 SEEATQVVGLASQCLQYEPRERPSTKNLV 320
S+E +++ ++ L + RPS + ++
Sbjct: 239 SDELNEII---TRMLNLKDYHRPSVEEIL 264
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 4e-31
Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 20/251 (7%)
Query: 85 VVYKGRLENR---QWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V KG + + + +AVK A + EA + +L + +IG C +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AE 80
Query: 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYR 199
+LV E L K+L + + ++ + + ++ + Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARN 137
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTPPEYLKNGRVIPESVIYSFG 252
VL ++S FGL K ++Y + + PE + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
++ + S P ++G + +++ + ++ L + C Y+
Sbjct: 198 VLMWEAFSYGQKPYRG----MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 253
Query: 313 RPSTKNLVVTL 323
RP + + L
Sbjct: 254 RPGFAAVELRL 264
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 9e-31
Identities = 49/263 (18%), Positives = 101/263 (38%), Gaps = 28/263 (10%)
Query: 85 VVYKGRLEN----RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
VY G L + + AVK ++ + +QF E + + +L+G C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 140 ER-LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH-DLNA 197
L+V YM + L ++ E + +A+ + + + + H DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAA 158
Query: 198 YRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--------LAYTPPEYLKNGRVIPESVIY 249
+ DE +++ FGL ++ D + S + + + E L+ + +S ++
Sbjct: 159 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 218
Query: 250 SFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---FSSEEATQVVGLASQCL 306
SFG +L +L++ P N + L+G+ + + +C
Sbjct: 219 SFGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271
Query: 307 QYEPRERPSTKNLVVTLARLQTK 329
+ RPS LV ++ + +
Sbjct: 272 HPKAEMRPSFSELVSRISAIFST 294
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 1e-30
Identities = 58/277 (20%), Positives = 100/277 (36%), Gaps = 26/277 (9%)
Query: 61 DLRAATNNFSSDNIVSESGEKAANVVYKGRLENR---QWIAVKKFTKVAWP-DPTQFKEE 116
L +N +I E G V +G R +A+K + D + E
Sbjct: 2 KLFLKRDNLLIADI--ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 59
Query: 117 AEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFY 176
A+ + +L + LIG C + +LV E L K L +++ I +
Sbjct: 60 AQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQ 117
Query: 177 IAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------L 229
++ + Y + ++ DL A VL ++S FGL K SY T L
Sbjct: 118 VSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176
Query: 230 AYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK 289
+ PE + + S ++S+G + + LS P + +M +GK
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP-------YKKMKGPEVMAFIEQGK 229
Query: 290 ---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVTL 323
E ++ L S C Y+ +RP + +
Sbjct: 230 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 266
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 1e-30
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 32/263 (12%)
Query: 85 VVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCA 137
+VY+G E +A+K + A + +F EA + + + L+G
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 138 GDERLLVAEYMPNDTLAKHLFHWEK--------QTIEWPLRLRVAFYIAEALDYCNTEGR 189
G L++ E M L +L +++A IA+ + Y N
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVI 243
++ DL A + ED ++ FG+ ++ + Y + + PE LK+G
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 244 PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---FSSEEATQVVG 300
S ++SFG VL ++ + P +G + ++ +EG +
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPY-------QGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 266
Query: 301 LASQCLQYEPRERPSTKNLVVTL 323
L C QY P+ RPS ++ ++
Sbjct: 267 LMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 118 bits (297), Expect = 1e-30
Identities = 64/307 (20%), Positives = 108/307 (35%), Gaps = 49/307 (15%)
Query: 58 SFLDLRAATNNFSSDNIVSESGEKAANVVYKGRL------ENRQWIAVKKFTKVAWPD-P 110
L L NN V + GE A V++ R E +AVK + A D
Sbjct: 4 KLLSLEYPRNNI---EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60
Query: 111 TQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQT------ 164
F+ EA + + + L+G C G L+ EYM L + L T
Sbjct: 61 ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120
Query: 165 ----------------IEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208
+ +L +A +A + Y + ++ DL L E+
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVV 179
Query: 209 RLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGK 262
+++ FGL +N Y + + + PPE + R ES ++++G VL ++ S
Sbjct: 180 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 239
Query: 263 HIPPSHALDMIRGENLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPRERPSTKNL 319
P G ++ +G ++ L C P +RPS ++
Sbjct: 240 LQPYY-------GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 292
Query: 320 VVTLARL 326
L R+
Sbjct: 293 HRILQRM 299
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 4e-30
Identities = 51/283 (18%), Positives = 97/283 (34%), Gaps = 22/283 (7%)
Query: 67 NNFSSDNIVSESGEKAANVVYKGRLEN-----RQWIAVKKFTKVAWPD-PTQFKEEAEGV 120
+ + ++ G VYKG L+ +A+K F EA +
Sbjct: 7 SCVTRQKVI---GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63
Query: 121 GKLRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEA 180
G+ + L G +++ EYM N + + + IA
Sbjct: 64 GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTP 233
+ Y + DL A +L + + ++S FGL + D + + +T
Sbjct: 123 MKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 234 PEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293
PE + + S ++SFG V+ ++++ P L + ++ +
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGE-RPYWELSN---HEVMKAINDGFRLPTPMD 237
Query: 294 EATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSNV 336
+ + L QC Q E RP ++V L +L D +
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTL 280
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 4e-30
Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 29/263 (11%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
I+ E G+ A VYK + E A K + + + E + + + L+
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
+ ++ E+ + + E+ + V +AL+Y + ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHDNKI-IH 133
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST----NLAYTPPEYL-----KNGRVI 243
DL A +LF DGD +L+ FG+ + + PE + K+
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 244 PESVIYSFGTVLLDLLSGKHIPPSHALD-------MIRGENLNLLMDSHLEGKFSSEEAT 296
++ ++S G L+++ + PP H L+ + + E L S S
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPMRVLLKIAKSEPPTLAQPSRW-----SSNFK 246
Query: 297 QVVGLASQCLQYEPRERPSTKNL 319
+ +CL+ R +T L
Sbjct: 247 DFL---KKCLEKNVDARWTTSQL 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (287), Expect = 2e-29
Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 17/253 (6%)
Query: 79 GEKAANVVYKGRL-ENRQWIAVKKF--TKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYC 135
G + VYKG E +A + K+ + +FKEEAE + L+ +
Sbjct: 18 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW 77
Query: 136 CAGDER----LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
+ + +LV E M + TL +L + ++ + I + L + +T P+
Sbjct: 78 ESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPI 135
Query: 192 YH-DLNAYRVLF-DEDGDPRLSCFGLMKNSMDGKSYST--NLAYTPPEYLKNGRVIPESV 247
H DL + G ++ GL + + + PE +
Sbjct: 136 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY-EEKYDESVD 194
Query: 248 IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQ 307
+Y+FG +L++ + ++ P S + + + F +V + C++
Sbjct: 195 VYAFGMCMLEMATSEY-PYSECQNA--AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIR 251
Query: 308 YEPRERPSTKNLV 320
ER S K+L+
Sbjct: 252 QNKDERYSIKDLL 264
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (284), Expect = 4e-29
Identities = 49/255 (19%), Positives = 82/255 (32%), Gaps = 15/255 (5%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANL 131
+V GE A V + +AVK D P K+E L + +
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68
Query: 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
G+ G+ + L EY L + + P R + + Y + G
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG-IT 125
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPE 245
+ D+ +L DE + ++S FGL L Y PE LK E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 246 SV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304
V ++S G VL +L+G+ + + K ++ +
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL---HK 242
Query: 305 CLQYEPRERPSTKNL 319
L P R + ++
Sbjct: 243 ILVENPSARITIPDI 257
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (285), Expect = 9e-29
Identities = 59/312 (18%), Positives = 110/312 (35%), Gaps = 47/312 (15%)
Query: 55 SEFSFLDLRAATNN----FSSDN--IVSESGEKAANVVYKGRLEN------RQWIAVKKF 102
+E+ ++D R + F +N G A V +AVK
Sbjct: 16 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 75
Query: 103 TKVAWP-DPTQFKEEAEGVGKLRR-KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHW 160
+ A + E + + +L + + NL+G C L+ EY L +L
Sbjct: 76 KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 135
Query: 161 EKQTIE---------------------WPLRLRVAFYIAEALDYCNTEGRPLYH-DLNAY 198
++ E + L A+ +A+ +++ E + H DL A
Sbjct: 136 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCVHRDLAAR 193
Query: 199 RVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPESVIYSFG 252
VL ++ FGL ++ M +Y + + PE L G +S ++S+G
Sbjct: 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG 253
Query: 253 TVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRE 312
+L ++ S P + N L+ + + ++ + C ++ R+
Sbjct: 254 ILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRK 310
Query: 313 RPSTKNLVVTLA 324
RPS NL L
Sbjct: 311 RPSFPNLTSFLG 322
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (284), Expect = 1e-28
Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 19/260 (7%)
Query: 79 GEKAANVVYKGRL-----ENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLI 132
G A VYKG + + +A+K+ + P + +EA + + + L+
Sbjct: 18 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
G C +L+ + MP L + K I L IA+ ++Y +
Sbjct: 78 GICLTSTVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-H 134
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPEYLKNGRVIPES 246
DL A VL +++ FGL K + + + E + + +S
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 194
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306
++S+G + +L++ P D I ++ +++ V + +C
Sbjct: 195 DVWSYGVTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 250
Query: 307 QYEPRERPSTKNLVVTLARL 326
+ RP + L++ +++
Sbjct: 251 MIDADSRPKFRELIIEFSKM 270
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 2e-28
Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 34/282 (12%)
Query: 79 GEKAANVVYKGRL------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRR-KRLAN 130
G A V + + +AVK A + E + + L + N
Sbjct: 32 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHW----------------EKQTIEWPLRLRVA 174
L+G C G L++ EY L L ++ ++ L +
Sbjct: 92 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 151
Query: 175 FYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------ 228
+ +A+ + + ++ ++ DL A +L ++ FGL ++ + +Y
Sbjct: 152 YQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 229 LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG 288
+ + PE + N ES ++S+G L +L S P ++
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---SKFYKMIKEGFRM 267
Query: 289 KFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330
++ + C +P +RP+ K +V + + ++S
Sbjct: 268 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 113 bits (283), Expect = 3e-28
Identities = 46/256 (17%), Positives = 86/256 (33%), Gaps = 18/256 (7%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
I E G A VV++ A K D ++E + + LR L NL
Sbjct: 30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
+E +++ E+M L + + E + + + + L + + ++
Sbjct: 90 DAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVH 147
Query: 193 HDLNAYRVLF--DEDGDPRLSCFGLMKNSMDGKSYST---NLAYTPPEYLKNGRVIPESV 247
DL ++F + +L FGL + +S + PE + V +
Sbjct: 148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 207
Query: 248 IYSFGTVLLDLLSGKHI----PPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303
++S G + LLSG L ++ + N MD S +
Sbjct: 208 MWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISED----GKDFIR 261
Query: 304 QCLQYEPRERPSTKNL 319
+ L +P R +
Sbjct: 262 KLLLADPNTRMTIHQA 277
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 3e-28
Identities = 44/251 (17%), Positives = 99/251 (39%), Gaps = 12/251 (4%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ G+ A+ VY + Q +A+++ P E + + + + N +
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
GDE +V EY+ +L + + ++ V +AL++ ++ ++
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIH 139
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----LAYTPPEYLKNGRVIPESVI 248
D+ + +L DG +L+ FG +S + + PE + P+ I
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQY 308
+S G + ++++ G+ PP + +R + + E + + + ++CL
Sbjct: 200 WSLGIMAIEMIEGE--PPYLNENPLR-ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 309 EPRERPSTKNL 319
+ +R S K L
Sbjct: 257 DVEKRGSAKEL 267
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 2e-27
Identities = 54/273 (19%), Positives = 91/273 (33%), Gaps = 30/273 (10%)
Query: 74 IVSESGEKAANVVYKGRLE----NRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRK 126
++ + G+ + VV +G + +AVK P F E + L +
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 127 RLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT 186
L L G ++ V E P +L + R A +AE + Y +
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 187 EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN-------LAYTPPEYLKN 239
+ ++ DL A +L ++ FGLM+ + A+ PE LK
Sbjct: 130 KRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIP-----PSHALDMIRGENLNLLMDSHLEGKFSSEE 294
S + FG L ++ + P S L I E L ++
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC-----PQD 243
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327
+ QC ++P +RP+ L L Q
Sbjct: 244 IYN---VMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 7e-27
Identities = 46/305 (15%), Positives = 115/305 (37%), Gaps = 26/305 (8%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIG 133
I + G +V++ + + + KF KV D K+E + R + + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 134 YCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYH 193
+ +E +++ E++ + + + + + + + EAL + ++ +
Sbjct: 69 SFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNI-GHF 126
Query: 194 DLNAYRVLFDEDGDPR--LSCFGLMKNSMDGKSYSTN---LAYTPPEYLKNGRVIPESVI 248
D+ +++ + FG + G ++ Y PE ++ V + +
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDM 186
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT------QVVGLA 302
+S GT++ LLSG + E ++++ + +++ +E + +
Sbjct: 187 WSLGTLVYVLLSGINPFL--------AETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 303 SQCLQYEPRERPSTKNLVVTLAR--LQTKSDVPSNVMLRVSKHEEAQSTPQRPLSPLAEA 360
+ L E + R + L L+ K + S ++R KH T + + +
Sbjct: 239 DRLLVKERKSRMTASEA---LQHPWLKQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVS 295
Query: 361 CSRMD 365
+R+
Sbjct: 296 AARIS 300
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 2e-26
Identities = 45/258 (17%), Positives = 85/258 (32%), Gaps = 33/258 (12%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLANLIGY 134
GE + + V R L + A+K K + E + + +L L
Sbjct: 17 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT 76
Query: 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP--LY 192
++ Y N L K++ FY AE + ++
Sbjct: 77 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTAEIVSALEYLHGKGIIH 131
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPES 246
DL +L +ED +++ FG K S+ Y PE L S
Sbjct: 132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 191
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEEATQVVGL 301
+++ G ++ L++G PP R N L+ ++ ++ +A +V
Sbjct: 192 DLWALGCIIYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV-- 241
Query: 302 ASQCLQYEPRERPSTKNL 319
+ L + +R + +
Sbjct: 242 -EKLLVLDATKRLGCEEM 258
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 104 bits (261), Expect = 6e-26
Identities = 48/258 (18%), Positives = 91/258 (35%), Gaps = 20/258 (7%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPT---QFKEEAEGVGKLRRKRLA 129
+ G + V+ R L + +AVK DP+ +F+ EA+ L +
Sbjct: 11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70
Query: 130 NLIGYC----CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCN 185
+ AG +V EY+ TL + + + V +AL++ +
Sbjct: 71 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSH 128
Query: 186 TEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNL-------AYTPPEYLK 238
G ++ D+ ++ ++ FG+ + D + T Y PE +
Sbjct: 129 QNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 187
Query: 239 NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298
V S +YS G VL ++L+G+ PP + ++ D + +
Sbjct: 188 GDSVDARSDVYSLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 245
Query: 299 VGLASQCLQYEPRERPST 316
+ + L P R T
Sbjct: 246 DAVVLKALAKNPENRYQT 263
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 104 bits (261), Expect = 1e-25
Identities = 51/263 (19%), Positives = 87/263 (33%), Gaps = 29/263 (11%)
Query: 73 NIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLAN 130
+ G A + V ++ +A+K K A + E + K++ +
Sbjct: 12 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 71
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L +G L+ + + L + EK R+ F + +A+ Y + G
Sbjct: 72 LDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIV 129
Query: 191 --LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---NLAYTPPEYLKNGRVIPE 245
N DED +S FGL K G ST Y PE L
Sbjct: 130 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 189
Query: 246 SVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS---------SEEAT 296
+S G + LL G PP EN L + L+ ++ S+ A
Sbjct: 190 VDCWSIGVIAYILLCGY--PP------FYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 241
Query: 297 QVVGLASQCLQYEPRERPSTKNL 319
+ ++ +P +R + +
Sbjct: 242 DFI---RHLMEKDPEKRFTCEQA 261
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 2e-25
Identities = 46/255 (18%), Positives = 95/255 (37%), Gaps = 23/255 (9%)
Query: 85 VVYKGRLENRQW----IAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGD 139
V++G + + +A+K +F +EA + + + LIG +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 80
Query: 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYR 199
++ E L + K +++ + A+ ++ AL Y ++ ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTN-----LAYTPPEYLKNGRVIPESVIYSFGTV 254
VL + +L FGL + D Y + + + PE + R S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 255 LLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPR 311
+ ++L P +G N ++ G+ + L ++C Y+P
Sbjct: 199 MWEILMHGVKPF-------QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPS 251
Query: 312 ERPSTKNLVVTLARL 326
RP L L+ +
Sbjct: 252 RRPRFTELKAQLSTI 266
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 104 bits (259), Expect = 5e-25
Identities = 57/261 (21%), Positives = 86/261 (32%), Gaps = 21/261 (8%)
Query: 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDP---TQFKEEAEGVGK 122
N+FS I+ G VY R + + A+K K T E +
Sbjct: 4 NDFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 60
Query: 123 LRRKRLAN---LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAE 179
+ + D+ + + M L HL + A I
Sbjct: 61 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIIL 118
Query: 180 ALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN--LAYTPPEYL 237
L++ + +Y DL +L DE G R+S GL + K +++ Y PE L
Sbjct: 119 GLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 177
Query: 238 KNGRVIPESV-IYSFGTVLLDLLSGKHIPPSHAL-DMIRGENLNLLMDSHLEGKFSSEEA 295
+ G S +S G +L LL G H D + + L M L FS E
Sbjct: 178 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE-- 235
Query: 296 TQVVGLASQCLQYEPRERPST 316
+ L LQ + R
Sbjct: 236 --LRSLLEGLLQRDVNRRLGC 254
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 103 bits (257), Expect = 9e-25
Identities = 44/256 (17%), Positives = 84/256 (32%), Gaps = 18/256 (7%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
I+ E G A VV++ + K D K E + +L +L NL
Sbjct: 33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 92
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
E +L+ E++ L + E + + E L + + ++
Sbjct: 93 DAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VH 150
Query: 193 HDLNAYRVLFDEDGDPR--LSCFGLMKNSMDGKS---YSTNLAYTPPEYLKNGRVIPESV 247
D+ ++ + + FGL + + + PE + V +
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTD 210
Query: 248 IYSFGTVLLDLLSGKH----IPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303
+++ G + LLSG L ++ + D+ S EA +
Sbjct: 211 MWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF---SSVSPEAKDFI---K 264
Query: 304 QCLQYEPRERPSTKNL 319
LQ EPR+R + +
Sbjct: 265 NLLQKEPRKRLTVHDA 280
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 1e-24
Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 33/271 (12%)
Query: 85 VVYKGR------LENRQWIAVKKFTKVAWPDPTQ--FKEEAEGVGKLRRKRLANLIGYCC 136
V + + +AVK + A + E + + NL+G C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 137 -AGDERLLVAEYMPNDTLAKHLFH--------------WEKQTIEWPLRLRVAFYIAEAL 181
G +++ E+ L+ +L K + + +F +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 182 DYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPPE 235
++ + ++ DL A +L E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295
+ + +S ++SFG +L ++ S P E + +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---EEFCRRLKEGTRMRAPDYTT 263
Query: 296 TQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
++ C EP +RP+ LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 3e-24
Identities = 46/248 (18%), Positives = 86/248 (34%), Gaps = 28/248 (11%)
Query: 85 VVYKGR-LENRQWIAVKKFTKVAWPDPTQFK----EEAEGVGKLRRKRLANLIGYCCAGD 139
V+ + Q+ A+K K + E+ L ++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYR 199
V EY+ L H+ + A I L + +++G +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDN 133
Query: 200 VLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA----YTPPEYLKNGRVIPESVIYSFGTVL 255
+L D+DG +++ FG+ K +M G + + Y PE L + +SFG +L
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 256 LDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEEATQVVGLASQCLQYEP 310
++L G+ G++ L S +EA ++ + EP
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLL---VKLFVREP 242
Query: 311 RERPSTKN 318
+R +
Sbjct: 243 EKRLGVRG 250
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.0 bits (246), Expect = 6e-24
Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 27/248 (10%)
Query: 85 VVYKGR-LENRQWIAVKKFTK------VAWPDPTQFKEEAEGVGKLRR--KRLANLIGYC 135
VY G + + +A+K K P+ T+ E + K+ + L+ +
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 136 CAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDL 195
D +L+ E E+ ++ L + + EA+ +C+ G L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 196 NAYRVLFDED-GDPRLSCFGLMKNSMDG--KSYSTNLAYTPPEYLKNGRVIPESV-IYSF 251
+L D + G+ +L FG D + Y+PPE+++ R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 252 GTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPR 311
G +L D++ G P H ++IRG+ + + S E ++ CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQ---VFFRQRV-----SSECQHLI---RWCLALRPS 244
Query: 312 ERPSTKNL 319
+RP+ + +
Sbjct: 245 DRPTFEEI 252
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 99.8 bits (248), Expect = 6e-24
Identities = 43/259 (16%), Positives = 93/259 (35%), Gaps = 26/259 (10%)
Query: 69 FSSDN--IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQ---FKEEAEGVGK 122
+S + I+ G + V+ R N ++ A+K K Q +E +
Sbjct: 1 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD 182
+ + + G + ++ +Y+ L + Q P+ A + AL+
Sbjct: 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-GKSYSTNLAYTPPEYLKNGR 241
Y +++ +Y DL +L D++G +++ FG K D + Y PE +
Sbjct: 119 YLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177
Query: 242 VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEEAT 296
+SFG ++ ++L+G N + L + +E+
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVK 229
Query: 297 QVVGLASQCLQYEPRERPS 315
++ S+ + + +R
Sbjct: 230 DLL---SRLITRDLSQRLG 245
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.5 bits (239), Expect = 8e-23
Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 35/272 (12%)
Query: 85 VVYKGRL--------ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKR-LANLIGY 134
V +AVK A D + E E + + + + + NL+G
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 135 CCAGDERLLVAEYMPNDTLAKHLFHW--------------EKQTIEWPLRLRVAFYIAEA 180
C ++ EY L ++L ++ + + A+ +A
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 181 LDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN------LAYTPP 234
++Y ++ ++ DL A VL ED +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 235 EYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEE 294
E L + +S ++SFG +L ++ + P + + E L L+ S
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326
++ + C P +RP+ K LV L R+
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.5 bits (237), Expect = 1e-22
Identities = 46/275 (16%), Positives = 91/275 (33%), Gaps = 43/275 (15%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPT---------QFKEEAEGVGKL 123
G ++VV + + AVK + +E + + K+
Sbjct: 7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66
Query: 124 RRKRLA-NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD 182
L LV + M L +L EK T+ ++ + E +
Sbjct: 67 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVIC 124
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST---NLAYTPPEYLKN 239
+ ++ DL +L D+D + +L+ FG G+ +Y PE ++
Sbjct: 125 ALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC 183
Query: 240 GRVI------PESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-- 291
E ++S G ++ LL+G PP L++ + G +
Sbjct: 184 SMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PP------FWHRKQMLMLRMIMSGNYQFG 235
Query: 292 -------SEEATQVVGLASQCLQYEPRERPSTKNL 319
S+ +V S+ L +P++R + +
Sbjct: 236 SPEWDDYSDTVKDLV---SRFLVVQPQKRYTAEEA 267
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.0 bits (238), Expect = 1e-22
Identities = 39/260 (15%), Positives = 82/260 (31%), Gaps = 19/260 (7%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDP------TQFKEEAEGVGKLRRK 126
E G VV K R A K K + E + +++
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 127 RLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT 186
+ L + +L+ E + L EK+++ I + Y ++
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 187 EGRPLYHDLNAYRVLFDEDGDPR----LSCFGLMKNSMDGKSYSTNL---AYTPPEYLKN 239
+ + DL ++ + P+ + FGL G + + PE +
Sbjct: 132 L-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299
+ E+ ++S G + LLSG ++ E ++ S +
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA--VNYEFEDEYFSNTSALAK 248
Query: 300 GLASQCLQYEPRERPSTKNL 319
+ L +P++R + ++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDS 268
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 89.2 bits (220), Expect = 2e-20
Identities = 46/276 (16%), Positives = 99/276 (35%), Gaps = 33/276 (11%)
Query: 74 IVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANL 131
+ + GE VVYK + + A+KK + P+ E + +L+ + L
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
+LV E++ D L + +E + + YC+ + R L
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCH-DRRVL 122
Query: 192 YHDLNAYRVLFDEDGDPRLSCFGLMK----NSMDGKSYSTNLAYTPPEYLKNGRVIPESV 247
+ DL +L + +G+ +++ FGL + L Y P+ L + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 248 -IYSFGTVLLDLLSGKHIPPS-----------------------HALDMIRGENLNLLMD 283
I+S G + ++++G + P + ++ + + + +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 284 SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
F + L S+ L+ +P +R + K
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.4 bits (218), Expect = 5e-20
Identities = 48/274 (17%), Positives = 83/274 (30%), Gaps = 36/274 (13%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPD-----PTQFKEEAEGVGKLRRKRLANLI 132
GE VYK R Q +A+KK + E + + +L + L+
Sbjct: 7 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 66
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
LV ++M D + + + L+Y + + L+
Sbjct: 67 DAFGHKSNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLH-QHWILH 123
Query: 193 HDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA----YTPPEYLKNGRVIPESV- 247
DL +L DE+G +L+ FGL K+ T+ Y PE L R+ V
Sbjct: 124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVD 183
Query: 248 IYSFGTVLLDLLSGKHI-------------------PPSHALDMIRGENLNLLMDSHLEG 288
+++ G +L +LL P + + S
Sbjct: 184 MWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI 243
Query: 289 KFS---SEEATQVVGLASQCLQYEPRERPSTKNL 319
S ++ L + P R +
Sbjct: 244 PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.0 bits (220), Expect = 5e-20
Identities = 44/258 (17%), Positives = 84/258 (32%), Gaps = 26/258 (10%)
Query: 79 GEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR-KRLANLIGYC- 135
G V + ++ A+K + + E E + + + ++
Sbjct: 21 GLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVYE 75
Query: 136 --CAGDERL-LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLY 192
AG + L +V E + L + Q + I EA+ Y ++ +
Sbjct: 76 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-H 134
Query: 193 HDLNAYRVLFD---EDGDPRLSCFGLMKNSMDGKSYSTN---LAYTPPEYLKNGRVIPES 246
D+ +L+ + +L+ FG K + S +T Y PE L +
Sbjct: 135 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 194
Query: 247 VIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEEATQVVGL 301
++S G ++ LL G S+ I + E SEE ++
Sbjct: 195 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI-- 252
Query: 302 ASQCLQYEPRERPSTKNL 319
L+ EP +R +
Sbjct: 253 -RNLLKTEPTQRMTITEF 269
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.1 bits (220), Expect = 5e-20
Identities = 46/282 (16%), Positives = 95/282 (33%), Gaps = 37/282 (13%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANL 131
+S GE A +V N+ +A+KK + + E + + + R + + +
Sbjct: 12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 71
Query: 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHW-EKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
A + Y+ + L+ + Q + + I L Y ++
Sbjct: 72 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV- 130
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST-------NLAYTPPEYLKNGRVI 243
L+ DL +L + D ++ FGL + + ++ Y PE + N +
Sbjct: 131 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 190
Query: 244 PESV-IYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE--------------- 287
+S+ I+S G +L ++LS + I P L +L E
Sbjct: 191 TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 250
Query: 288 ----------GKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ ++ + L + L + P +R +
Sbjct: 251 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.5 bits (213), Expect = 2e-19
Identities = 54/278 (19%), Positives = 93/278 (33%), Gaps = 35/278 (12%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLAN 130
V + GE VVYK R + +A+KK + P+ E + +L +
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L+ ++ LV E++ D L K + I PL F + + L +C++
Sbjct: 66 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS--HR 122
Query: 191 LYH-DLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA-----YTPPEYLKNGRVIP 244
+ H DL +L + +G +L+ FGL + T+ P L
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 245 ESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL----------------------- 281
I+S G + ++++ + + P + L
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
K L SQ L Y+P +R S K
Sbjct: 243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 86.4 bits (213), Expect = 2e-19
Identities = 40/283 (14%), Positives = 82/283 (28%), Gaps = 29/283 (10%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+ + G + +Y G + + +A+K Q E++ ++ I
Sbjct: 11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTI 68
Query: 133 GYCCA-GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
+C A GD ++V E + LF++ + L +A + ++Y +++ +
Sbjct: 69 RWCGAEGDYNVMVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-I 125
Query: 192 YHDLNAYRVLFDEDGDPRL---SCFGLMKNSMDGKSYSTN-----------LAYTPPEYL 237
+ D+ L L FGL K D +++ Y
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 185
Query: 238 KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALD-----MIRGENLNLLMDSHLEGKFSS 292
+ S G VL+ G R + + K
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245
Query: 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
E + + C ++P L L + +
Sbjct: 246 SEFATYL---NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 285
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 85.2 bits (210), Expect = 5e-19
Identities = 36/285 (12%), Positives = 77/285 (27%), Gaps = 31/285 (10%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR-LANL 131
+ GE + V+++G L N Q +A+K + + D Q ++E L + N+
Sbjct: 9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNV 66
Query: 132 IGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPL 191
+ G +LV + + L + A + + + + +
Sbjct: 67 YYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS-LV 123
Query: 192 YHDLNAYRVLFDE-----DGDPRLSCFGLMKNSMDGKSYSTN-----------LAYTPPE 235
Y D+ L + FG++K D + Y
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183
Query: 236 YLKNGRVIPESVIYSFGTVLLDLLSGKHIPP-----SHALDMIRGENLNLLMDSHLEGKF 290
+ + G V + L G ++ R
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAG 243
Query: 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKSDVPSN 335
EE + + P L +++ + + +
Sbjct: 244 FPEEFYKYM---HYARNLAFDATPDYDYLQGLFSKVLERLNTTED 285
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.6 bits (211), Expect = 6e-19
Identities = 49/264 (18%), Positives = 90/264 (34%), Gaps = 30/264 (11%)
Query: 67 NNFSSDNIVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDP---TQFKEEAEGVGK 122
N+F + + G+ V R ++ A+K K E+ +
Sbjct: 5 NDF---DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 123 LRRKRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD 182
R L L D V EY L HL T E I AL+
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 119
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLA----YTPPEYLK 238
Y ++ +Y D+ ++ D+DG +++ FGL K + + Y PE L+
Sbjct: 120 YLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 239 NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SE 293
+ + G V+ +++ G+ ++ L + L + S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFY--------NQDHERLFELILMEEIRFPRTLSP 230
Query: 294 EATQVVGLASQCLQYEPRERPSTK 317
EA ++ + L+ +P++R
Sbjct: 231 EAKSLL---AGLLKKDPKQRLGGG 251
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.5 bits (208), Expect = 1e-18
Identities = 46/281 (16%), Positives = 93/281 (33%), Gaps = 36/281 (12%)
Query: 74 IVSESGEKAANVVYKGR--LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLA 129
V+E GE A V+K R +++A+K+ + P E + L
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 130 N---LIGYCCAGDERLLVAEYMPNDTLA----KHLFHWEKQTIEWPLRLRVAFYIAEALD 182
N L C + + + +L + + + F + LD
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN---LAYTPPEYLKN 239
+ ++ ++ DL +L G +L+ FGL + + ++ L Y PE L
Sbjct: 131 FLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 240 GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLL------------------ 281
++S G + ++ K + + G+ L+++
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 282 ---MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
+ KF ++ L +CL + P +R S +
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.8 bits (209), Expect = 1e-18
Identities = 59/285 (20%), Positives = 112/285 (39%), Gaps = 46/285 (16%)
Query: 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRK 126
+++ ++ G + VVY+ +L ++ + +A+KK + D E + + KL
Sbjct: 21 SYTDTKVI---GNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHC 73
Query: 127 RLANLIGYCCAGDER------LLVAEYMPNDTLAKHLFHWE-KQTIEWPLRLRVAFYIAE 179
+ L + + E+ LV +Y+P + KQT+ + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 180 ALDYCNTEGRPLYH-DLNAYRVLFDEDG-DPRLSCFGLMKNSMDGKSYSTNL---AYTPP 234
+L Y ++ G + H D+ +L D D +L FG K + G+ + + Y P
Sbjct: 134 SLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 235 EYLKNGRVIPESV-IYSFGTVLLDLLSGKHIPPSH-----------ALDMIRGENLNLLM 282
E + S+ ++S G VL +LL G+ I P L E + +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 283 DSHLEGKFSSEEAT------------QVVGLASQCLQYEPRERPS 315
++ E KF +A + + L S+ L+Y P R +
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.8 bits (201), Expect = 2e-17
Identities = 42/282 (14%), Positives = 94/282 (33%), Gaps = 41/282 (14%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTK--VAWPDPTQFKEEAEGVGKLRRKRLAN 130
+ G A V +A+KK + + + E + +R + +
Sbjct: 22 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG 81
Query: 131 LIGYCCAGD------ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYC 184
L+ + + LV +M D + + + + + + + L Y
Sbjct: 82 LLDVFTPDETLDDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137
Query: 185 NTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVI 243
+ G + DL + +ED + ++ FGL + + Y Y PE + N
Sbjct: 138 HAAGII-HRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY 196
Query: 244 PESV-IYSFGTVLLDLLSGKHI-------------------PPSHALDMIRGENLNLLMD 283
++V I+S G ++ ++++GK + PP+ + ++ + M
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256
Query: 284 SHLE------GKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
E + + V L + L + +R +
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.7 bits (198), Expect = 2e-17
Identities = 51/295 (17%), Positives = 95/295 (32%), Gaps = 55/295 (18%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLAN 130
+++ G+ V+K R + Q +A+KK + P E + + L+ + + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 131 LIGYCCAGDER--------LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALD 182
LI C LV ++ +D K T+ RV + L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLY 131
Query: 183 YCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK--------NSMDGKSYSTNLAYTPP 234
Y + L+ D+ A VL DG +L+ FGL + + L Y PP
Sbjct: 132 YIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 235 EYLKNGRVIPESV-IYSFGTVLLDLLSGKHI-------------------PPSHALDMIR 274
E L R + ++ G ++ ++ + I +
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 275 GENLNLLMD----------SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
L ++ L+ A + L + L +P +R + +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYA---LDLIDKLLVLDPAQRIDSDDA 302
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.6 bits (195), Expect = 4e-17
Identities = 43/274 (15%), Positives = 93/274 (33%), Gaps = 35/274 (12%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLAN 130
+ + GE V+K + E + +A+K+ + P+ E + +L+ K +
Sbjct: 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
L + + LV E+ D F ++ + F + + L +C++
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV- 122
Query: 191 LYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTN----LAYTPPEYLKNGRVIPES 246
L+ DL +L + +G+ +L+ FGL + + L Y PP+ L ++ S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 247 V-IYSFGTVLLDLLSGKHIP------------------------PSHALDMIRGENLNLL 281
+ ++S G + +L + + + +
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242
Query: 282 MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPS 315
+ + L L+ P +R S
Sbjct: 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 76.8 bits (188), Expect = 6e-16
Identities = 38/253 (15%), Positives = 76/253 (30%), Gaps = 24/253 (9%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQ---FKEEAEGVGKLRRKRLA 129
+ G + V + E+ A+K K Q E + + L
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 130 NLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGR 189
L +V EY+ + HL P A I +Y ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 190 PLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD-GKSYSTNLAYTPPEYLKNGRVIPESVI 248
+Y DL +L D+ G +++ FG K + PE + +
Sbjct: 163 -IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDW 221
Query: 249 YSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS-----SEEATQVVGLAS 303
++ G ++ ++ +G + + + + GK S + ++
Sbjct: 222 WALGVLIYEMAAGYPPFF--------ADQPIQIYEKIVSGKVRFPSHFSSDLKDLL---R 270
Query: 304 QCLQYEPRERPST 316
LQ + +R
Sbjct: 271 NLLQVDLTKRFGN 283
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (175), Expect = 2e-14
Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 21/259 (8%)
Query: 74 IVSESGEKAANVVYKGRL----ENRQWIAVKKFTKVAWPDPTQ----FKEEAEGVGKLRR 125
++ G A V+ R + + A+K K + + E + + +R+
Sbjct: 28 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87
Query: 126 KR-LANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYC 184
L L + L+ +Y+ L HL E+ T I AL++
Sbjct: 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE--VQIYVGEIVLALEHL 145
Query: 185 NTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYL------- 237
+ G +Y D+ +L D +G L+ FGL K + ++ EY+
Sbjct: 146 HKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 204
Query: 238 KNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297
+ +S G ++ +LL+G P + E + E +
Sbjct: 205 GDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 262
Query: 298 VVGLASQCLQYEPRERPST 316
L + L +P++R
Sbjct: 263 AKDLIQRLLMKDPKKRLGC 281
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.7 bits (169), Expect = 2e-13
Identities = 42/310 (13%), Positives = 91/310 (29%), Gaps = 65/310 (20%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLI 132
+V + G + V+ + + N +A+K ++E + + ++
Sbjct: 17 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKED 75
Query: 133 GYCCAGDERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIA 178
+LL + +E + I +++ +
Sbjct: 76 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135
Query: 179 EALDYCNTEGRPLYHDLNAYRVLFDEDGDP------RLSCFGLMKNSMDGKSYS-TNLAY 231
LDY + ++ D+ VL + P +++ G + + S Y
Sbjct: 136 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREY 195
Query: 232 TPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--- 288
PE L + I+S ++ +L++G + ++ ++ L G
Sbjct: 196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 255
Query: 289 ---------------------------------------KFSSEEATQVVGLASQCLQYE 309
KFS +EA ++ S LQ +
Sbjct: 256 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 315
Query: 310 PRERPSTKNL 319
PR+R L
Sbjct: 316 PRKRADAGGL 325
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.4 bits (166), Expect = 4e-13
Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 33/278 (11%)
Query: 74 IVSESGEKAANVVYKGR-LENRQWIAVKKFTK--VAWPDPTQFKEEAEGVGKLRRKRLAN 130
+S G A V + +AVKK ++ + + E + ++ + +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 131 LIGYCCAGDERLLVAEYMPNDTLAKHLFH--WEKQTIEWPLRLRVAFYIAEALDYCNTEG 188
L+ + L + + Q + + + I L Y ++
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 189 RPLYHDLNAYRVLFDEDGDPRLSCFGL-MKNSMDGKSYSTNLAYTPPEYLKNGRVIPESV 247
+ DL + +ED + ++ FGL + Y Y PE + N ++V
Sbjct: 142 II-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 248 -IYSFGTVLLDLLSGKH-------------------IPPSHALDMIRGENLNLLMDSHLE 287
I+S G ++ +LL+G+ P + L I E+ + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 288 ------GKFSSEEATQVVGLASQCLQYEPRERPSTKNL 319
V L + L + +R +
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 66.4 bits (161), Expect = 1e-12
Identities = 51/306 (16%), Positives = 108/306 (35%), Gaps = 53/306 (17%)
Query: 58 SFLDLRAATNNFSSDN---IVSESGEKAANVVYKGR-LENRQWIAVKKFTKVAWPDPTQF 113
+ D + + + + +V + G + V++ + N + + VK V +
Sbjct: 20 EYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKI 76
Query: 114 KEEAEGVGKLRRKR-LANLIGYCCAGDERL--LVAEYMPNDTLAKHLFHWEKQTIEWPLR 170
K E + + LR + L R LV E++ N + QT+
Sbjct: 77 KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDI 131
Query: 171 LRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSMDGKSYSTN- 228
+ I +ALDYC++ G + D+ + V+ D E RL +GL + G+ Y+
Sbjct: 132 RFYMYEILKALDYCHSMGIM-HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 229 --LAYTPPEYLKNGRVIPESV-IYSFGTVLLDLLSGKH---------------------- 263
+ PE L + ++ S+ ++S G +L ++ K
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250
Query: 264 ----------IPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRER 313
I + I G + + + + + + + + L+Y+ + R
Sbjct: 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 310
Query: 314 PSTKNL 319
+ +
Sbjct: 311 LTAREA 316
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.1 bits (147), Expect = 8e-11
Identities = 38/308 (12%), Positives = 93/308 (30%), Gaps = 57/308 (18%)
Query: 59 FLDLRAATNNFSSDN---IVSESGEKAANVVYKGR-LENRQWIAVKKFTK--VAWPDPTQ 112
F + + F+ + G A +V + +A+KK ++ +
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 113 FKEEAEGVGKLRRKRLANLIGYCCA------GDERLLVAEYMPNDTLAKHLFHWEKQTIE 166
E + + K + +L+ + LV E M + +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD----- 117
Query: 167 WPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYS 226
+ + + + + + ++ DL ++ D ++ FGL + + +
Sbjct: 118 HERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 176
Query: 227 TN---LAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHI------------------- 264
Y PE + I+S G ++ +++ K +
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
Query: 265 PPSHALDMIRGENLNLLMD-----------------SHLEGKFSSEEATQVVGLASQCLQ 307
P + ++ N + + + + + +A+Q L S+ L
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296
Query: 308 YEPRERPS 315
+P +R S
Sbjct: 297 IDPAKRIS 304
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.4 bits (101), Expect = 2e-05
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA 460
E ++QG+ F + + A Y + I N + Y R+LC+L + + AL D +A
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 461 QCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALE 498
A + +++ +A L +L
Sbjct: 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 39.4 bits (91), Expect = 4e-04
Identities = 25/148 (16%), Positives = 39/148 (26%), Gaps = 27/148 (18%)
Query: 85 VVYKGRLENRQWIAVK----------KFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGY 134
V+ E VK K + F A + + L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 135 CCAG----DERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRP 190
+ ++ E + L + V I E + R
Sbjct: 75 AVPKVYAWEGNAVLMELIDAKELYRVRVENPD---------EVLDMILEEVAKFYH--RG 123
Query: 191 LYH-DLNAYRVLFDEDGDPRLSCFGLMK 217
+ H DL+ Y VL E+G + F
Sbjct: 124 IVHGDLSQYNVLVSEEG-IWIIDFPQSV 150
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 508 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.91 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.79 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.79 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.76 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.74 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.73 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.72 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.65 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.65 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.63 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.61 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.59 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.57 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.54 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.5 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.49 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.49 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.41 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.38 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.34 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.31 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.29 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.26 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.23 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.22 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.21 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.19 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.17 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.16 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.16 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.15 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.13 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.13 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.01 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.97 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.89 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.88 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.88 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.87 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.8 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.75 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.7 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.61 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.5 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.47 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.45 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.41 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.34 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.28 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.22 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.15 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.09 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 97.97 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.93 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.88 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.86 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.48 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.43 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.36 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.21 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.13 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 83.15 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 82.35 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-56 Score=420.71 Aligned_cols=253 Identities=23% Similarity=0.316 Sum_probs=206.9
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
-++|+++++||+|+||+||+|++.+++.||||+++... ...++|.+|+.++++++|||||+++|+|..++..+||||||
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~ 82 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence 35788999999999999999999888899999997644 44678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 83 ~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~ 160 (263)
T d1sm2a_ 83 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160 (263)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred CCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence 99999998864 4467899999999999999999999999 999999999999999999999999999865443 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|+|||++.+..++.++|||||||++|||+|+..||...... ..+...+........+..+++++.+|+.
T Consensus 161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH----HHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH----HHHHHHHHhcCCCCCccccCHHHHHHHH
Confidence 346789999999999999999999999999999999976565432111 1111112222233344556778999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHhhc
Q 010529 304 QCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+||+.||++|||+++|+++|+.+..
T Consensus 237 ~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999864
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.6e-56 Score=422.90 Aligned_cols=256 Identities=20% Similarity=0.287 Sum_probs=218.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
..++|++.++||+|+||+||+|++. +++.||||+++... ...++|.+|+.+|++++|||||+++++|.+++..+||||
T Consensus 15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E 93 (287)
T d1opja_ 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 93 (287)
T ss_dssp CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence 3457888999999999999999965 58889999997544 456789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC---
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
||++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 94 ~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~ 172 (287)
T d1opja_ 94 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172 (287)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred cccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence 999999999997666778999999999999999999999999 9999999999999999999999999998765432
Q ss_pred --ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHH
Q 010529 224 --SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGL 301 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 301 (508)
...|++.|+|||++.+..++.++|||||||++|||+||..||..... ...+...+........+..+++++.+|
T Consensus 173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELLEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC----HHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch----HHHHHHHHhcCCCCCCCccchHHHHHH
Confidence 23468899999999999999999999999999999998777643321 111222333334445566677889999
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 302 ASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+.+||+.||.+|||+.+|++.|+.+...
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887643
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-56 Score=418.51 Aligned_cols=257 Identities=21% Similarity=0.255 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
..++|.+++.||+|+||+||+|++++ .||||+++.... ...+.|.+|+.+|++++|||||++++++. .+..+|||
T Consensus 6 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~ 82 (276)
T d1uwha_ 6 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 82 (276)
T ss_dssp CTTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEE
Confidence 35678899999999999999998654 499999975432 23467999999999999999999999975 45689999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|||+||+|.+++.. ....+++..+..|+.||++||.|||+++ ||||||||+|||++.++.+||+|||+|+.....
T Consensus 83 Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~ 160 (276)
T d1uwha_ 83 QWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160 (276)
T ss_dssp ECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred ecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence 99999999999964 3457999999999999999999999999 999999999999999999999999999765432
Q ss_pred ---CccccCCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||...............-.........+..+++
T Consensus 161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 240 (276)
T d1uwha_ 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240 (276)
T ss_dssp -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCH
T ss_pred ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchH
Confidence 34568999999999864 357899999999999999999998875421110000000000000001123345567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.+.+|+.+||..||.+|||+.+|+++|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 899999999999999999999999999998754
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-56 Score=420.29 Aligned_cols=245 Identities=17% Similarity=0.247 Sum_probs=209.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.+|.++++||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 3589999999999999999994 569999999998766666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Cc
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KS 224 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 224 (508)
+||+|.+++. ...+++.++..|+.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++..... ..
T Consensus 100 ~gg~L~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 175 (293)
T d1yhwa1 100 AGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (293)
T ss_dssp TTCBHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeeccccccccc
Confidence 9999999885 346999999999999999999999999 999999999999999999999999999865433 34
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhh-ccccCCCCCHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLM-DSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~ 303 (508)
..||+.|+|||++.+..++.++|||||||++|+|+||+.||....... ...... ........+...++.+.+|+.
T Consensus 176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~~li~ 251 (293)
T d1yhwa1 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYLIATNGTPELQNPEKLSAIFRDFLN 251 (293)
T ss_dssp CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHHCSCCCSSGGGSCHHHHHHHH
T ss_pred cccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH----HHHHHHhCCCCCCCCcccCCHHHHHHHH
Confidence 568999999999999999999999999999999999998875432110 011111 111112234556788999999
Q ss_pred HhcccCCCCCCChHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~ 322 (508)
+||..||.+|||+.|+++|
T Consensus 252 ~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 252 RCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp HHTCSSTTTSCCHHHHTTC
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999877
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-56 Score=418.61 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=212.1
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+++|+++++||+|+||+||+|++++++.||||+++... ...+.|.+|+.++++++|||||+++|++. .+..+||||||
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeC
Confidence 46788999999999999999999888899999997543 45678999999999999999999999885 45679999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++|+|.+++.......+++..++.|+.||++||.|||+++ |+||||||+||||+.++.+||+|||+|+..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 9999999886545557999999999999999999999999 999999999999999999999999999876543 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|+|||++.++.++.++|||||||++|||+||..||...... ......+........+..+++++.+|+.
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~----~~~~~~i~~~~~~~~p~~~~~~l~~li~ 244 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVIQNLERGYRMVRPDNCPEELYQLMR 244 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCCCCcccChHHHHHHHH
Confidence 346788999999999889999999999999999999977665433211 1111112222333345566778999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHhh
Q 010529 304 QCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+||+.||++|||+.+|++.|+.+-
T Consensus 245 ~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 245 LCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhhhh
Confidence 999999999999999999998764
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4e-56 Score=425.19 Aligned_cols=265 Identities=20% Similarity=0.268 Sum_probs=208.2
Q ss_pred cCHHHHHHHhcCC------CcccccccCCCCcccEEEEEEEcC-C---CEEEEEEecCCCCC-ChhHHHHHHHHhccCCC
Q 010529 57 FSFLDLRAATNNF------SSDNIVSESGEKAANVVYKGRLEN-R---QWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRR 125 (508)
Q Consensus 57 ~~~~~~~~~~~~~------~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h 125 (508)
++++++..++..| +.|++.+.||+|+||+||+|++.. + ..||||++...... ..+.|.+|+.+|++++|
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 86 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence 4555666665544 456778899999999999999643 3 25889988654332 24579999999999999
Q ss_pred CCCcceeeeeeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC
Q 010529 126 KRLANLIGYCCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205 (508)
Q Consensus 126 ~nIv~~~~~~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~ 205 (508)
||||+++|+|..++..+||||||+||+|.+++.. ....+++.+++.|+.||++||.|||+++ |+||||||+||||+.+
T Consensus 87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~ 164 (299)
T d1jpaa_ 87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSN 164 (299)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred CCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCC
Confidence 9999999999999999999999999999998864 4557999999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCccccCCCC---------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhc
Q 010529 206 GDPRLSCFGLMKNSMDGK---------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRG 275 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~ 275 (508)
+.+||+|||+++...... ...+|+.|+|||++.++.++.++|||||||++|||+| |+.|+......
T Consensus 165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~---- 240 (299)
T d1jpaa_ 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ---- 240 (299)
T ss_dssp CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----
T ss_pred CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH----
Confidence 999999999998654331 1246788999999999999999999999999999998 77665432111
Q ss_pred cchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 276 ENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+...+......+.+..++..+.+|+.+||+.||.+|||+.+|++.|+.+..
T Consensus 241 -~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 241 -DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp -HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 1112222223334455677889999999999999999999999999998764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-56 Score=416.47 Aligned_cols=247 Identities=19% Similarity=0.159 Sum_probs=203.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|++++.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 4689999999999999999996 5689999999975433 2346799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC------
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD------ 221 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~------ 221 (508)
|+||+|.+++. ....+++.++..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 99999999986 4567999999999999999999999999 99999999999999999999999999986532
Q ss_pred CCccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 222 GKSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 222 ~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....+||+.|||||++.+..+ +.++|||||||++|||+||+.||........ ..................++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH---HHHHHHTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH---HHHHHhcCCCCCCccccCCHHHHH
Confidence 234579999999999988776 5789999999999999999988754321100 011111111111222345678899
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
|+.+||+.||.+|||+.|+++|
T Consensus 239 li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999876
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-55 Score=406.84 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=212.0
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
-++|+++++||+|+||+||+|++++++.||||+++... ...+.|.+|+.++++++|||||+++|+|.+++..++||||+
T Consensus 3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~ 81 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81 (258)
T ss_dssp CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence 36778999999999999999999888899999998654 34678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++|+|.+++.. ....+++..+.+|+.||++||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (258)
T d1k2pa_ 82 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159 (258)
T ss_dssp TTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred CCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence 99999998754 4457899999999999999999999999 999999999999999999999999999754433 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... .+...+........+...++.+.+|+
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~~~~l~~li 234 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRPHLASEKVYTIM 234 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH-----HHHHHHHhCCCCCCcccccHHHHHHH
Confidence 3457889999999999999999999999999999998 67665432211 11122222233344556678899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHh
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+||+.||++|||+.+|+++|..|
T Consensus 235 ~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 235 YSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHHccCCHhHCcCHHHHHHHhhCC
Confidence 999999999999999999998653
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-55 Score=412.12 Aligned_cols=246 Identities=20% Similarity=0.283 Sum_probs=209.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|++++.||+|+||+||+|+. .+++.||||++... .....+.+.+|+.+++.++|||||++++++.+++..||||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4688999999999999999996 46889999998642 2234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--C
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--K 223 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--~ 223 (508)
|||+||+|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 99999999999963 457999999999999999999999999 999999999999999999999999999866544 3
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+... ...++...++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRV--EFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTT--CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH----HHHHHcC--CCCCCccCCHHHHHHHH
Confidence 45789999999999999999999999999999999999988754321111 1111111 12234556788999999
Q ss_pred HhcccCCCCCCChHHHHHHHH
Q 010529 304 QCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~ 324 (508)
+||+.||.+|||+.|+++|-+
T Consensus 237 ~~L~~dp~~R~t~~eil~hp~ 257 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEHPW 257 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTCHH
T ss_pred HHccCCHhHCcCHHHHHcCcC
Confidence 999999999999999998743
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-55 Score=416.62 Aligned_cols=246 Identities=17% Similarity=0.193 Sum_probs=206.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMP 149 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~ 149 (508)
.|++++.||+|+||.||+|+. .+++.||||++........+.+.+|+++|++++|||||++++++.+++..+||||||+
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 478999999999999999995 5689999999987665666789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----Ccc
Q 010529 150 NDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----KSY 225 (508)
Q Consensus 150 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 225 (508)
||+|.+++.+ ....+++.++..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|...... ...
T Consensus 93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999998764 3457999999999999999999999999 999999999999999999999999998754332 356
Q ss_pred ccCCCCCCccccc-----cCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc-ccCCCCCHHHHHHHH
Q 010529 226 STNLAYTPPEYLK-----NGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS-HLEGKFSSEEATQVV 299 (508)
Q Consensus 226 ~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 299 (508)
.||+.|+|||++. +..|+.++|||||||++|||+||+.||...... ..+..+... ......+...++++.
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~s~~~~ 246 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM----RVLLKIAKSEPPTLAQPSRWSSNFK 246 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHHHHHHHSCCCCCSSGGGSCHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHcCCCCCCCccccCCHHHH
Confidence 7999999999984 456889999999999999999999886542111 111111111 111122445678899
Q ss_pred HHHHHhcccCCCCCCChHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+|+.+||+.||.+|||+.|+++|
T Consensus 247 ~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 247 DFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999876
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-55 Score=412.71 Aligned_cols=249 Identities=17% Similarity=0.205 Sum_probs=197.1
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeee--CCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCA--GDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~l 143 (508)
.++|++++.||+|+||+||+|+. .+|+.||||++....... .+.+.+|+++|++++|||||++++++.+ .+.+||
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 35789999999999999999995 568999999997654332 3568999999999999999999999865 456899
Q ss_pred eeecCCCCCHHHHhhcc--CCCCcChHHHHHHHHHHHHHHHHHHhCC----CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 144 VAEYMPNDTLAKHLFHW--EKQTIEWPLRLRVAFYIAEALDYCNTEG----RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~----~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
|||||+||+|.+++... ....+++..++.|+.||+.||.|||+.+ .||||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 99999999999998642 3467999999999999999999999864 39999999999999999999999999998
Q ss_pred ccCCC----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHH
Q 010529 218 NSMDG----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSE 293 (508)
Q Consensus 218 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+. .......+..
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~----~~~i~-~~~~~~~~~~ 237 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL----AGKIR-EGKFRRIPYR 237 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHH-HTCCCCCCTT
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH----HHHHH-cCCCCCCCcc
Confidence 65443 345789999999999999999999999999999999999988754321111 11111 1112234555
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 294 EATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 294 ~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.++++.+|+.+||+.||.+|||+.|+++|
T Consensus 238 ~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 238 YSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 67889999999999999999999999875
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.4e-55 Score=417.83 Aligned_cols=247 Identities=19% Similarity=0.188 Sum_probs=207.8
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
|.++++||+|+||+||+|+. .+++.||||++....... .+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 78899999999999999995 568899999997654333 24688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCCcccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGKSYST 227 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 227 (508)
|.||+|..++. ....+++.++..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 99999977665 3567999999999999999999999999 99999999999999999999999999998888888899
Q ss_pred CCCCCCcccccc---CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 228 NLAYTPPEYLKN---GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 228 t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
|+.|||||++.+ +.|+.++|||||||++|||++|..||...... ..+..+.........+...++.+.+|+.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHSCCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45899999999999999999999886543211 11111111111112233456789999999
Q ss_pred hcccCCCCCCChHHHHHHHHH
Q 010529 305 CLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 305 cl~~~p~~Rps~~~il~~L~~ 325 (508)
||..||.+|||+.++++|-+-
T Consensus 250 ~L~~dP~~Rpt~~ell~Hp~~ 270 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLKHRFV 270 (309)
T ss_dssp HTCSSGGGSCCHHHHTTCHHH
T ss_pred HCcCChhHCcCHHHHHhCHHh
Confidence 999999999999999987443
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-54 Score=407.31 Aligned_cols=253 Identities=21% Similarity=0.254 Sum_probs=205.9
Q ss_pred CcccccccCCCCcccEEEEEEEcCC-----CEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENR-----QWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
+.|.+.+.||+|+||+||+|.+++. ..||||++....... ..+|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 4566778899999999999996542 369999997544322 3479999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
|||||.+++|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 87 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 164 (283)
T d1mqba_ 87 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 164 (283)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence 9999999999988764 4567999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 -------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
...||+.|+|||++.++.++.++|||||||++|||+||..|+...... ..+...+......+.+..++.
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~ 240 (283)
T d1mqba_ 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGFRLPTPMDCPS 240 (283)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTTCCCCCCTTCBH
T ss_pred ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHHHHhccCCCCCchhhHH
Confidence 234688899999999999999999999999999999987666543211 112222333344455566778
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus 241 ~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~ 272 (283)
T d1mqba_ 241 AIYQLMMQCWQQERARRPKFADIVSILDKLIR 272 (283)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence 89999999999999999999999999998865
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-54 Score=419.16 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=203.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|++++.||+|+||+||+|+. .+|+.||||+++...... ..++.+|+.+|+.++|||||+++++|.+++..||||||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4688999999999999999995 568999999997654333 46799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhC-CCceeecCCCcceeeCCCCCeEEcccCCccccCC--CCc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTE-GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD--GKS 224 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~--~~~ 224 (508)
|+||+|.+++.+ .+.+++..+..++.||+.||.|||+. + |+||||||+|||++.+|.+||+|||+|+.... ..+
T Consensus 86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 162 (322)
T d1s9ja_ 86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162 (322)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence 999999999974 45799999999999999999999974 8 99999999999999999999999999985433 345
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh---ccc------------------------
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR---GEN------------------------ 277 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~~~------------------------ 277 (508)
.+||+.|+|||++.+..|+.++|||||||++|||+||+.||......... ...
T Consensus 163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1s9ja_ 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242 (322)
T ss_dssp -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence 68999999999999999999999999999999999999887643211000 000
Q ss_pred -------hhhhhcccc---CCCCC-HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 278 -------LNLLMDSHL---EGKFS-SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 278 -------~~~~~~~~~---~~~~~-~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
......... ....+ ...+.++.+|+.+||..||.+|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000000000 00011 1235678999999999999999999999998
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-54 Score=407.14 Aligned_cols=254 Identities=23% Similarity=0.315 Sum_probs=210.2
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
+++|++.+.||+|+||.||+|+++++..||||+++... ...+.|.+|+.++++++|||||+++|+|. .+..++|||||
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence 45789999999999999999999888889999997544 45678999999999999999999999985 45689999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-----C
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-----K 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-----~ 223 (508)
++|+|..++.......+++.+++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..... .
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 9999999887655567999999999999999999999999 999999999999999999999999999865433 2
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|+|||++.++.++.++|||||||++|||+||..|+...... ......+......+.+..+++++.+|+.
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l~~li~ 248 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMC 248 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCCCCCcccCHHHHHHHH
Confidence 345789999999999999999999999999999999987776543211 1111112222333455667788999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 304 QCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 304 ~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
+||+.||++|||+.+|++.|+.+...
T Consensus 249 ~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 249 QCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 99999999999999999999886643
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-54 Score=407.37 Aligned_cols=248 Identities=20% Similarity=0.246 Sum_probs=204.5
Q ss_pred ccccc-cCCCCcccEEEEEEEc---CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 72 DNIVS-ESGEKAANVVYKGRLE---NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 72 ~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
+.+.. +||+|+||+||+|.+. ++..||||+++..... ..++|.+|+++|++++|||||+++|+|.. +..|||||
T Consensus 10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE 88 (285)
T d1u59a_ 10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 88 (285)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEE
Confidence 34445 4899999999999853 3557999999765422 24679999999999999999999999864 56899999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
||+||+|.+++.. ....+++.++..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~ 166 (285)
T d1u59a_ 89 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 166 (285)
T ss_dssp CCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred eCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhccccccccc
Confidence 9999999998753 4567999999999999999999999999 999999999999999999999999999865433
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQV 298 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (508)
....||+.|+|||++.++.++.++|||||||++|||+| |+.||..... ..+...+........+..+++++
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l 241 (285)
T d1u59a_ 167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPEL 241 (285)
T ss_dssp CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHH
Confidence 23357889999999998999999999999999999998 7877643211 11222223333344566678889
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 299 VGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 299 ~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus 242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 242 YALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999999999988764
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.3e-54 Score=410.01 Aligned_cols=245 Identities=17% Similarity=0.220 Sum_probs=191.9
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.|++++.||+|+||+||+|+. .+++.||||++...... ....+.+|+.+|+.++|||||++++++.+++..|||||||
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~ 89 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 378999999999999999995 46899999999755432 3456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC---CCCCeEEcccCCccccCCC---
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD---EDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~--- 222 (508)
+||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||+. .++.+||+|||+++.....
T Consensus 90 ~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 90 SGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred CCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 9999999996 4567999999999999999999999999 99999999999994 5789999999999866543
Q ss_pred CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHHHHHHHHH
Q 010529 223 KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEATQVVG 300 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+.... .....+...++++.+
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~ 242 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL----FEQILKAEYEFDSPYWDDISDSAKD 242 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHTTCCCCCTTTTTTSCHHHHH
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHhccCCCCCCccccCCCHHHHH
Confidence 345799999999999999999999999999999999999988765321111 11111111 111223456778999
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
|+.+||..||.+|||+.|+++|
T Consensus 243 li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 243 FIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCCHhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-54 Score=405.72 Aligned_cols=242 Identities=20% Similarity=0.276 Sum_probs=198.4
Q ss_pred ccCCCCcccEEEEEEEcC---CCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecCCC
Q 010529 76 SESGEKAANVVYKGRLEN---RQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYMPN 150 (508)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~~~ 150 (508)
++||+|+||+||+|.+.+ ++.||||+++...... .+.|.+|+++|++++|||||+++|+|.. +..+||||||++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 368999999999998643 4679999997543322 4579999999999999999999999854 567899999999
Q ss_pred CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC-------
Q 010529 151 DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK------- 223 (508)
Q Consensus 151 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~------- 223 (508)
|+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 92 g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 99999986 3457999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLA 302 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (508)
...||+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+...+........+..+++++.+|+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~-----~~~~~~~i~~~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccCHHHHHHH
Confidence 2357889999999999999999999999999999998 776654321 1112222223333445566778899999
Q ss_pred HHhcccCCCCCCChHHHHHHHHHh
Q 010529 303 SQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 303 ~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
.+||+.||.+|||+.+|++.|+..
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCH
Confidence 999999999999999999888765
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-53 Score=399.77 Aligned_cols=252 Identities=22% Similarity=0.308 Sum_probs=204.1
Q ss_pred CCcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC-Ccceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG-DERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-~~~~lv~E~ 147 (508)
.+++++++.||+|+||.||+|+++ |..||||+++... ..+.|.+|++++++++|||||+++|+|.+. +.++|||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 456788999999999999999985 6679999996543 457899999999999999999999998654 568999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Cccc
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KSYS 226 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~ 226 (508)
+++|+|.+++.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 99999999997544456999999999999999999999999 999999999999999999999999999865443 3456
Q ss_pred cCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHHhc
Q 010529 227 TNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQCL 306 (508)
Q Consensus 227 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 306 (508)
+|..|+|||++.++.++.++||||||+++|||+|+..||+... ....+...+......+.+...++++.+|+.+||
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl 237 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI----PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW 237 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS----CGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC----CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence 7889999999999999999999999999999999544443221 111222223333445556667788999999999
Q ss_pred ccCCCCCCChHHHHHHHHHhhc
Q 010529 307 QYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 307 ~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..||.+|||+.+++++|+.++.
T Consensus 238 ~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 238 HLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999998864
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-54 Score=414.04 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=206.7
Q ss_pred CCcccccccCCCCcccEEEEEEEcC-C-----CEEEEEEecCCC-CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN-R-----QWIAVKKFTKVA-WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDE 140 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 140 (508)
.++|++++.||+|+||+||+|++.. + ..||||++.... ......+.+|+.+|.++ +|||||+++++|.+.+.
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~ 115 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 115 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence 3578899999999999999999643 2 268999986543 23456799999999998 89999999999999999
Q ss_pred ceeeeecCCCCCHHHHhhccC---------------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcc
Q 010529 141 RLLVAEYMPNDTLAKHLFHWE---------------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYR 199 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~N 199 (508)
.+||||||+||+|.+++.... ...+++..++.|+.||+.||.|||+++ ||||||||+|
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~N 194 (325)
T d1rjba_ 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARN 194 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGG
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhc
Confidence 999999999999999996432 135899999999999999999999999 9999999999
Q ss_pred eeeCCCCCeEEcccCCccccCCCC------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhh
Q 010529 200 VLFDEDGDPRLSCFGLMKNSMDGK------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDM 272 (508)
Q Consensus 200 ill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~ 272 (508)
||++.++.+||+|||+|+...... ...||+.|||||++.++.++.++|||||||++|||+| |+.||.+...
T Consensus 195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~-- 272 (325)
T d1rjba_ 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-- 272 (325)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC--
T ss_pred cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH--
Confidence 999999999999999997654432 3456899999999999999999999999999999998 7776543211
Q ss_pred hhccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 273 IRGENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
...+..++........+..+++++.+||.+||+.||++|||+.+|+++|..
T Consensus 273 --~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 273 --DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp --SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 111223333334445566677889999999999999999999999999964
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=400.85 Aligned_cols=245 Identities=18% Similarity=0.218 Sum_probs=196.4
Q ss_pred ccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeee----CCcceee
Q 010529 72 DNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCA----GDERLLV 144 (508)
Q Consensus 72 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~lv 144 (508)
|++..+||+|+||+||+|+. .++..||||++...... ..+.|.+|+++|++++|||||++++++.. ...+|||
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 35566899999999999995 46889999998754322 24579999999999999999999999865 3457999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC-CceeecCCCcceeeC-CCCCeEEcccCCccccCCC
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG-RPLYHDLNAYRVLFD-EDGDPRLSCFGLMKNSMDG 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~Dfg~a~~~~~~ 222 (508)
||||+||+|.+++.. ...+++..+..|+.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~ 168 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168 (270)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence 999999999999963 457999999999999999999999976 499999999999996 5789999999999865443
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+ .++.++|||||||++|||+||+.||........ ....+........++...++++.+
T Consensus 169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~ 244 (270)
T d1t4ha_ 169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEVKE 244 (270)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH---HHHHHHcCCCCcccCccCCHHHHH
Confidence 34579999999999864 699999999999999999999988753211100 001111111111122234567899
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
|+.+||..||++|||+.|+++|
T Consensus 245 li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 245 IIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCCHhHCcCHHHHhCC
Confidence 9999999999999999999876
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-54 Score=407.73 Aligned_cols=246 Identities=17% Similarity=0.174 Sum_probs=207.1
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|++++.||+|+||+||+|+. .+++.||||++... .....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5789999999999999999996 56899999998642 2234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC---
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~--- 222 (508)
|||+||+|.+++. ..+.+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 88 Ey~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 9999999999886 3467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHH
Q 010529 223 ---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVV 299 (508)
Q Consensus 223 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (508)
....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+... ...++...++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI----FQKIIKL--EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHTT--CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH----HHHHHcC--CCCCCccCCHHHH
Confidence 245699999999999999999999999999999999999988754321111 1111111 1234455678899
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHH
Q 010529 300 GLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 300 ~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+|+.+||..||.+|||+.|++.+.+
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~~~ 263 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGYGP 263 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCHHH
T ss_pred HHHHHHccCCHhHCcCHHHHcCCHH
Confidence 9999999999999999999876644
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2e-53 Score=414.58 Aligned_cols=248 Identities=17% Similarity=0.157 Sum_probs=209.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++.|++++.||+|+||.||+|+. .+|+.||||++......+...+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45689999999999999999995 56999999999765544456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC--CCCCeEEcccCCccccCCCC--
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD--EDGDPRLSCFGLMKNSMDGK-- 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~Dfg~a~~~~~~~-- 223 (508)
|+||+|.+++.. ....+++.++..|+.||+.||.|||++| |+||||||+||||+ .++.+||+|||+|.......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999988753 4457999999999999999999999999 99999999999997 67899999999998776543
Q ss_pred -ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcc--ccCCCCCHHHHHHHHH
Q 010529 224 -SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDS--HLEGKFSSEEATQVVG 300 (508)
Q Consensus 224 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 300 (508)
...||+.|+|||++.+..++.++|||||||++|+|+||+.||.+...... ...+... ..........++++.+
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~ 261 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET----LQNVKRCDWEFDEDAFSSVSPEAKD 261 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHH
Confidence 35689999999999999999999999999999999999988754321111 1111111 1112223456778999
Q ss_pred HHHHhcccCCCCCCChHHHHHH
Q 010529 301 LASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~ 322 (508)
||.+||+.||.+|||+.|+++|
T Consensus 262 li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 262 FIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.3e-53 Score=412.75 Aligned_cols=247 Identities=17% Similarity=0.157 Sum_probs=207.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
++|++++.||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4689999999999999999995 568999999997655445667999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC--CCCCeEEcccCCccccCCCC---
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD--EDGDPRLSCFGLMKNSMDGK--- 223 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~Dfg~a~~~~~~~--- 223 (508)
+||+|.+++.. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++......
T Consensus 106 ~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 183 (350)
T d1koaa2 106 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 183 (350)
T ss_dssp CSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred CCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence 99999999854 4457999999999999999999999999 99999999999995 46889999999998765543
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSSEEATQVVGL 301 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l 301 (508)
...||+.|||||++.+..++.++|||||||++|+|+||+.||........ ...+..... ........++++.+|
T Consensus 184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~l 259 (350)
T d1koaa2 184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDF 259 (350)
T ss_dssp EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCSCCGGGGGCCHHHHHH
T ss_pred eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHHH
Confidence 45789999999999999999999999999999999999988754321111 111111111 111123456789999
Q ss_pred HHHhcccCCCCCCChHHHHHH
Q 010529 302 ASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 302 ~~~cl~~~p~~Rps~~~il~~ 322 (508)
+.+||..||.+|||+.|+++|
T Consensus 260 i~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 260 IRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHHHCCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999987
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-52 Score=404.12 Aligned_cols=245 Identities=19% Similarity=0.269 Sum_probs=209.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.++|++++.||+|+||.||+|+. .+|+.||||++.+. .....+.+.+|+.+|+.++|||||++++++.+...+|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 46789999999999999999995 57999999999643 223457799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
||||+||+|.+++. ....+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 84 ~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 99999999999987 3567899999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
...+||+.|+|||++.+..|+.++|||||||++|||+||+.||........ ...+... ...++...++++.+
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~d 234 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILME--EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH----HHHHhcC--CCCCCccCCHHHHH
Confidence 346799999999999999999999999999999999999988765432111 1111111 12345566788999
Q ss_pred HHHHhcccCCCCCCC-----hHHHHHH
Q 010529 301 LASQCLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps-----~~~il~~ 322 (508)
||.+||+.||.+|++ +.++++|
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHhhccCCchhhcccccccHHHHHcC
Confidence 999999999999995 8888887
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-52 Score=400.38 Aligned_cols=257 Identities=23% Similarity=0.281 Sum_probs=209.5
Q ss_pred CCCcccccccCCCCcccEEEEEEEc-CCC--EEEEEEecCCC-CCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcce
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLE-NRQ--WIAVKKFTKVA-WPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 142 (508)
+|++|++.++||+|+||+||+|++. ++. .||||++.... ....+.|.+|+++|+++ +|||||+++|+|.+.+..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 5678889999999999999999964 444 47888876443 23456899999999999 7999999999999999999
Q ss_pred eeeecCCCCCHHHHhhcc--------------CCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCe
Q 010529 143 LVAEYMPNDTLAKHLFHW--------------EKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDP 208 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~ 208 (508)
+||||++||+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCce
Confidence 999999999999999643 2357999999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc
Q 010529 209 RLSCFGLMKNSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH 285 (508)
Q Consensus 209 kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 285 (508)
||+|||+++..... ....||..|+|||.+.++.++.++|||||||++|||++|..||..... ...+...+...
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~----~~~~~~~i~~~ 242 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT----CAELYEKLPQG 242 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHHHHHGGGT
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC----HHHHHHHHHhc
Confidence 99999998755432 344688999999999999999999999999999999998765543211 11111112222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 286 LEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 286 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.....+...++++.+||.+||+.||++|||+.+|+++|+++...
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 243 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 33445566778899999999999999999999999999998754
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-52 Score=394.98 Aligned_cols=252 Identities=18% Similarity=0.245 Sum_probs=198.5
Q ss_pred CCcccccccCCCCcccEEEEEEEcC----CCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.++|++.+.||+|+||.||+|++.. +..||||+++...... .+.|.+|+.+|++++|||||+++|++. .+..++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i 84 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 84 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence 4578899999999999999998643 3468899886544322 457999999999999999999999985 567899
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
|||||++|+|.+++.. ....+++..++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 v~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 85 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 9999999999998754 4567999999999999999999999999 999999999999999999999999999865433
Q ss_pred ----CccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHH
Q 010529 223 ----KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQ 297 (508)
Q Consensus 223 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
....||+.|+|||++.+..++.++|||||||++|||+| |.+|+..... ..+...+......+.+..+++.
T Consensus 163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~ 237 (273)
T d1mp8a_ 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMPPNCPPT 237 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHH
T ss_pred ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHH
Confidence 23456889999999999999999999999999999998 6655432211 1111111222233455667788
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
+.+||.+||..||.+|||+.+|+++|+.+..
T Consensus 238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 238 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998753
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.7e-52 Score=400.23 Aligned_cols=244 Identities=18% Similarity=0.230 Sum_probs=208.2
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++|++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+.+|+.++|||||++++++.+.+..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 5689999999999999999995 56999999999643 2234578999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-Cc
Q 010529 146 EYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-KS 224 (508)
Q Consensus 146 E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~~ 224 (508)
|||+||+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+..... ..
T Consensus 84 E~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 9999999999886 4567889999999999999999999999 999999999999999999999999999876544 45
Q ss_pred cccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 010529 225 YSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLASQ 304 (508)
Q Consensus 225 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (508)
..||+.|+|||++.+..++.++|||||||++|+|+||+.||........ ...+... ...++...++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT----YEKILNA--ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHH
Confidence 6799999999999999999999999999999999999988754321111 1111111 122345567789999999
Q ss_pred hcccCCCCCC-----ChHHHHHH
Q 010529 305 CLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 305 cl~~~p~~Rp-----s~~~il~~ 322 (508)
||..||.+|+ |+.++++|
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HhhhCHHhccccchhhHHHHHcC
Confidence 9999999996 89999987
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-52 Score=397.51 Aligned_cols=243 Identities=16% Similarity=0.147 Sum_probs=203.7
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC------ChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
.|++++.||+|+||+||+|+. .+|+.||||++...... ..+.|.+|+.+|++++|||||++++++.+.+..||
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 489999999999999999996 56899999999654322 24679999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC----CeEEcccCCcccc
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG----DPRLSCFGLMKNS 219 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~Dfg~a~~~ 219 (508)
|||||+||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999974 457999999999999999999999999 99999999999998776 4999999999866
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCC----H
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFS----S 292 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 292 (508)
... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+...... ...+.... ..++ .
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~~--~~~~~~~~~ 241 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANVSAVN--YEFEDEYFS 241 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHTTC--CCCCHHHHT
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH----HHHHHhcC--CCCCchhcC
Confidence 543 345789999999999988999999999999999999999988764321111 11111110 1111 2
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..+..+.+|+.+||..||.+|||+.++++|
T Consensus 242 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 345778999999999999999999999986
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-52 Score=400.93 Aligned_cols=251 Identities=17% Similarity=0.259 Sum_probs=204.6
Q ss_pred CcccccccCCCCcccEEEEEEEc-CCC----EEEEEEecCCC-CCChhHHHHHHHHhccCCCCCCcceeeeeeeCCccee
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE-NRQ----WIAVKKFTKVA-WPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 143 (508)
++|++++.||+|+||+||+|.+. +|+ .||||+++... ....++|.+|+.++++++|||||+++|+|.+ +..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence 56899999999999999999954 444 58999886543 3346789999999999999999999999976 45678
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCCC
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDGK 223 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 223 (508)
|||++.+++|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 5668999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCHHHHH
Q 010529 224 ------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEAT 296 (508)
Q Consensus 224 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
...||+.|+|||++.++.++.++|||||||++|||+| |..|+.... ...+...+........+..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~-----~~~~~~~i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----GGGHHHHHHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccCH
Confidence 2357899999999999999999999999999999999 554443211 1122233333333445566778
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 297 QVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+.+|+.+||+.||.+|||+.+|+++|..+..
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 89999999999999999999999999988754
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.6e-52 Score=399.98 Aligned_cols=253 Identities=22% Similarity=0.304 Sum_probs=208.2
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCCC-hhHHHHHHHHhccCCCCCCcceeeeeeeCCcce
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWPD-PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERL 142 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 142 (508)
++|+++++||+|+||+||+|++. +++.||||+++...... .++|.+|+.+|++++||||++++++|...+..+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 46789999999999999999964 35689999997544322 457999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHhhccC----------------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcce
Q 010529 143 LVAEYMPNDTLAKHLFHWE----------------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRV 200 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Ni 200 (508)
+||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+++ +|||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccce
Confidence 9999999999999986421 234889999999999999999999999 99999999999
Q ss_pred eeCCCCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh
Q 010529 201 LFDEDGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR 274 (508)
Q Consensus 201 ll~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~ 274 (508)
|++.++.+||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|..||.......
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~-- 249 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-- 249 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHH--
Confidence 9999999999999998754332 23467889999999999999999999999999999999976544322111
Q ss_pred ccchhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhh
Q 010529 275 GENLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQ 327 (508)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~ 327 (508)
+.... +........+..+++++.+|+.+||+.||.+||||.+|++.|+++.
T Consensus 250 -e~~~~-v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 250 -EVIYY-VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp -HHHHH-HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred -HHHHH-HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11111 1222223345566788999999999999999999999999999874
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-52 Score=391.82 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=197.7
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC--C--CEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCCc
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN--R--QWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGDE 140 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 140 (508)
+..+|+++++||+|+||.||+|++.. + ..||||+++...... .++|.+|+.+|++++|||||+++|+|.+ +.
T Consensus 6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~ 84 (273)
T d1u46a_ 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP 84 (273)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc
Confidence 34678999999999999999998532 3 368999987643322 3579999999999999999999999965 56
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.++|||||++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 85 MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp CEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred hheeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcc
Confidence 7899999999999988764 3457999999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC-------ccccCCCCCCccccccCCcCccccchhhHHHHHHHHh-CCCCCCchhhhhhhccchhhhhccccCCCCCH
Q 010529 221 DGK-------SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLS-GKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292 (508)
Q Consensus 221 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
... ...|+..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+.......+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~----~~~~~i~~~~~~~~~~~ 238 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILHKIDKEGERLPRPE 238 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHHTSCCCCCCCT
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH----HHHHHHHhCCCCCCCcc
Confidence 432 2346778999999999999999999999999999998 77765432111 11122223333334455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHh
Q 010529 293 EEATQVVGLASQCLQYEPRERPSTKNLVVTLARL 326 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~ 326 (508)
..+..+.+|+.+||..||.+|||+.+|++.|...
T Consensus 239 ~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 239 DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 6678899999999999999999999999988765
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-51 Score=396.01 Aligned_cols=257 Identities=18% Similarity=0.228 Sum_probs=200.0
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC------CCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeC-
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAG- 138 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~- 138 (508)
..++|+++++||+|+||.||+|++.. ++.||||+++..... ..+.+.+|..++.++ +|+|||.+++++...
T Consensus 11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 45678999999999999999999532 467999998754322 245688888888887 789999999998765
Q ss_pred CcceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC
Q 010529 139 DERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE 204 (508)
Q Consensus 139 ~~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~ 204 (508)
...++|||||++|+|.+++.... ...+++.++..++.||++||.|||+++ ||||||||+||||+.
T Consensus 91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 169 (299)
T ss_dssp SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECG
T ss_pred CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECC
Confidence 46899999999999999996432 235899999999999999999999999 999999999999999
Q ss_pred CCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccch
Q 010529 205 DGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENL 278 (508)
Q Consensus 205 ~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 278 (508)
++.+||+|||+|+..... ....||+.|+|||++.+..++.++|||||||++|||+||..+|+.... ....+
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~---~~~~~ 246 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK---IDEEF 246 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---CSHHH
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC---HHHHH
Confidence 999999999999754432 234688999999999999999999999999999999998765443211 01112
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 279 NLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
...+........+...++++.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22223333344555667889999999999999999999999999998753
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2e-51 Score=389.41 Aligned_cols=252 Identities=17% Similarity=0.201 Sum_probs=202.3
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---hhHHHHHHHHhccCCCCCCcceeeeeeeCC----cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---PTQFKEEAEGVGKLRRKRLANLIGYCCAGD----ER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~----~~ 141 (508)
++|++++.||+|+||.||+|+. .+|+.||||+++.....+ ...|.+|+.+++.++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 4589999999999999999995 579999999998665444 346899999999999999999999987654 37
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|||||||+|++|.+++. ..+.+++.++..|+.||+.||.|||+++ |+||||||+|||++.++.++|+|||.+.....
T Consensus 87 ~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhcc
Confidence 89999999999999886 3457999999999999999999999999 99999999999999999999999998865433
Q ss_pred C-------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhcccc--CCCCCH
Q 010529 222 G-------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHL--EGKFSS 292 (508)
Q Consensus 222 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 292 (508)
. ....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ....+.... ......
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~ 239 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV----AYQHVREDPIPPSARHE 239 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHCCCCCGGGTSS
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH----HHHHHhcCCCCCchhcc
Confidence 2 345689999999999999999999999999999999999988754321111 011111100 011223
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-ChHHHHHHHHHhhc
Q 010529 293 EEATQVVGLASQCLQYEPRERP-STKNLVVTLARLQT 328 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rp-s~~~il~~L~~~~~ 328 (508)
..++++.+|+.+||+.||.+|| |+.++++.|.++..
T Consensus 240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 4567899999999999999998 89999999988753
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-51 Score=396.59 Aligned_cols=250 Identities=17% Similarity=0.124 Sum_probs=200.7
Q ss_pred Cccccccc-CCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeee----CCcce
Q 010529 70 SSDNIVSE-SGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCA----GDERL 142 (508)
Q Consensus 70 ~~~~~~~~-lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~----~~~~~ 142 (508)
++|.++++ ||+|+||.||+|+. .+++.||||+++. ...+.+|+.++.++ +|||||++++++.+ ...+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 46788865 99999999999995 6789999999853 35788999987655 89999999999865 35689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC---CCCeEEcccCCcccc
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE---DGDPRLSCFGLMKNS 219 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~Dfg~a~~~ 219 (508)
||||||+||+|.+++.......+++.++..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceeeec
Confidence 9999999999999997544567999999999999999999999999 999999999999975 567999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCC--CCCHHH
Q 010529 220 MDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEG--KFSSEE 294 (508)
Q Consensus 220 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 294 (508)
... ....||+.|+|||++.+..|+.++|||||||++|+|+||+.||.+.............+....... ......
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 443 345799999999999999999999999999999999999988754321111000001111111111 111345
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHHHHHH
Q 010529 295 ATQVVGLASQCLQYEPRERPSTKNLVVTLAR 325 (508)
Q Consensus 295 ~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~ 325 (508)
++++.+|+.+||+.||.+|||+.++++|-+-
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~ 275 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 275 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHSHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcCHHh
Confidence 7889999999999999999999999998443
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.8e-51 Score=387.80 Aligned_cols=247 Identities=17% Similarity=0.170 Sum_probs=206.5
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC---------hhHHHHHHHHhccCC-CCCCcceeeeeee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD---------PTQFKEEAEGVGKLR-RKRLANLIGYCCA 137 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~nIv~~~~~~~~ 137 (508)
+++|++++.||+|+||+||+|+. .+++.||||++....... .+.+.+|+.++++++ |||||++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 56889999999999999999995 578999999997654322 135889999999996 9999999999999
Q ss_pred CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
++..|||||||+||+|.+++.. .+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999974 457999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCCCCCCcccccc------CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--c
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKN------GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--L 286 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~ 286 (508)
..... ....||+.|+|||++.+ ..++.++||||+||++|+|+||+.||........ ...+.... .
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~----~~~i~~~~~~~ 234 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM----LRMIMSGNYQF 234 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCC
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH----HHHHHhCCCCC
Confidence 76543 44578999999999863 3468899999999999999999988765422111 11111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 287 EGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 287 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
........++++.+|+.+||..||.+|||+.|+++|
T Consensus 235 ~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 235 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 122234567889999999999999999999999876
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.2e-51 Score=400.19 Aligned_cols=245 Identities=16% Similarity=0.148 Sum_probs=208.2
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceee
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
.++|++++.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+|+.++|||||++++++......++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 35789999999999999999995 56999999998642 223456799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-C
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-K 223 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 223 (508)
|||+.||+|..++.. .+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999863 457999999999999999999999999 999999999999999999999999999876543 4
Q ss_pred ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHHHHH
Q 010529 224 SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVGLAS 303 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (508)
...||+.|||||++.+..++.++|||||||++|||+||+.||........ ...+... ....+...++++.+|+.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH----HHHHhcC--CCCCCccCCHHHHHHHH
Confidence 56799999999999999999999999999999999999988754321111 1111111 11234456778999999
Q ss_pred HhcccCCCCCC-----ChHHHHHH
Q 010529 304 QCLQYEPRERP-----STKNLVVT 322 (508)
Q Consensus 304 ~cl~~~p~~Rp-----s~~~il~~ 322 (508)
+||..||.+|+ |+.++++|
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhhCHHhccccccccHHHHHcC
Confidence 99999999994 89999987
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-51 Score=390.85 Aligned_cols=249 Identities=18% Similarity=0.269 Sum_probs=203.2
Q ss_pred cccCCCCcccEEEEEEEcC----CCEEEEEEecCCCC-CChhHHHHHHHHhccCCCCCCcceeeeeee-CCcceeeeecC
Q 010529 75 VSESGEKAANVVYKGRLEN----RQWIAVKKFTKVAW-PDPTQFKEEAEGVGKLRRKRLANLIGYCCA-GDERLLVAEYM 148 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~lv~E~~ 148 (508)
-+.||+|+||+||+|++.+ ...||||+++.... ...++|.+|+++|++++|||||+++|+|.. ++..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 3468999999999999643 22589999975332 224679999999999999999999999876 45789999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC------
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG------ 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~------ 222 (508)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 112 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~ 189 (311)
T d1r0pa_ 112 KHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189 (311)
T ss_dssp TTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTT
T ss_pred ecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccce
Confidence 99999998864 4556788899999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||.+.++.++.++||||||+++|||+||+.||...... ..+...+........+..+++.+.+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~l~~ 265 (311)
T d1r0pa_ 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDPLYE 265 (311)
T ss_dssp CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHHHHH
Confidence 2235788999999999999999999999999999999988777653211 1111112222233345556778999
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 301 LASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
|+.+||+.||++|||+.||+++|+.+...
T Consensus 266 li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 266 VMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999764
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-51 Score=394.74 Aligned_cols=248 Identities=15% Similarity=0.189 Sum_probs=207.1
Q ss_pred CCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
-|++|.++++||+|+||+||+|+. .+++.||||+++... .+...+.+|+.+|+.++|||||++++++.+++..|||||
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE 81 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 377899999999999999999995 468899999997543 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC--CCeEEcccCCccccCCCC-
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED--GDPRLSCFGLMKNSMDGK- 223 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~--~~~kl~Dfg~a~~~~~~~- 223 (508)
||+||+|.+++.. ....+++.++..|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++.......
T Consensus 82 ~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~ 159 (321)
T d1tkia_ 82 FISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred cCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence 9999999999963 3447999999999999999999999999 9999999999999844 579999999998765543
Q ss_pred --ccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH----HHHHH
Q 010529 224 --SYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS----EEATQ 297 (508)
Q Consensus 224 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 297 (508)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||........ ...+..... .++. ..+++
T Consensus 160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~----~~~i~~~~~--~~~~~~~~~~s~~ 233 (321)
T d1tkia_ 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAEY--TFDEEAFKEISIE 233 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCC--CCCHHHHTTSCHH
T ss_pred ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCC--CCChhhccCCCHH
Confidence 34688999999999999999999999999999999999988765322111 111111111 1122 24677
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 298 VVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 298 l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
+.+|+.+||..||.+|||+.|+++|-+
T Consensus 234 ~~~li~~~L~~dp~~R~s~~eil~hp~ 260 (321)
T d1tkia_ 234 AMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHHHccCChhHCcCHHHHhcCHh
Confidence 899999999999999999999999743
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.3e-51 Score=399.64 Aligned_cols=246 Identities=17% Similarity=0.144 Sum_probs=201.9
Q ss_pred CCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCC---CCChhHHHH---HHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVA---WPDPTQFKE---EAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
.++|++++.||+|+||.||+|+. .+|+.||||++.... ......+.+ |+.+++.++|||||++++++.+.+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 46789999999999999999995 469999999985421 122233444 47778888999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
|||||||+||+|.+++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999973 457899999999999999999999999 99999999999999999999999999986654
Q ss_pred C--CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccc--cCCCCCHHHHH
Q 010529 222 G--KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSH--LEGKFSSEEAT 296 (508)
Q Consensus 222 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 296 (508)
. ....||+.|+|||++.. ..++.++|||||||++|||+||+.||..... .....+.... .....+...++
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~ 234 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMTLTMAVELPDSFSP 234 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS-----SCHHHHHHHSSSCCCCCCSSSCH
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcccCCCCCCCCCCH
Confidence 4 34579999999999864 5689999999999999999999988754321 1111111111 11223445678
Q ss_pred HHHHHHHHhcccCCCCCCC-----hHHHHHH
Q 010529 297 QVVGLASQCLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 297 ~l~~l~~~cl~~~p~~Rps-----~~~il~~ 322 (508)
++.+||.+||..||.+||| +.++++|
T Consensus 235 ~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 235 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred HHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 8999999999999999999 6888887
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-51 Score=389.27 Aligned_cols=255 Identities=22% Similarity=0.275 Sum_probs=205.8
Q ss_pred CCCcccccccCCCCcccEEEEEEEcC--------CCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeee
Q 010529 68 NFSSDNIVSESGEKAANVVYKGRLEN--------RQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCA 137 (508)
Q Consensus 68 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~ 137 (508)
..++|++++.||+|+||.||+|+..+ +..||||+++..... ....+.+|...+.++ +|||||+++++|.+
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 34678999999999999999998532 247999999765432 245788999999888 89999999999999
Q ss_pred CCcceeeeecCCCCCHHHHhhccC--------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWE--------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD 203 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~ 203 (508)
++..++|||||++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ ||||||||+|||++
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVT 169 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEC
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeec
Confidence 999999999999999999996432 245899999999999999999999999 99999999999999
Q ss_pred CCCCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhC-CCCCCchhhhhhhcc
Q 010529 204 EDGDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSG-KHIPPSHALDMIRGE 276 (508)
Q Consensus 204 ~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~ 276 (508)
.++.+||+|||+++..... ....+|+.|+|||.+.++.|+.++||||||||+|||+|+ ..|+..... .
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-----~ 244 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----E 244 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----H
T ss_pred CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-----H
Confidence 9999999999998855432 234678899999999999999999999999999999995 544432211 1
Q ss_pred chhhhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 277 NLNLLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.+...+........+...++++.+|+.+||+.||.+|||+.+|++.|+++..
T Consensus 245 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 245 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 1222233333444555667889999999999999999999999999998854
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-51 Score=392.73 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=203.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCC---CCCChhHHHHHHHHhc-cCCCCCCcceeeeeeeCCcceee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKV---AWPDPTQFKEEAEGVG-KLRRKRLANLIGYCCAGDERLLV 144 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~h~nIv~~~~~~~~~~~~~lv 144 (508)
++|.+++.||+|+||+||+|+. .+++.||||++++. .....+.+..|..++. .++|||||++++++.+++..|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 5789999999999999999995 56899999999643 2234556778887765 68999999999999999999999
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC--
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG-- 222 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~-- 222 (508)
||||+||+|.+++. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 99999999999997 3456899999999999999999999999 999999999999999999999999999854432
Q ss_pred --CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHHHHHHH
Q 010529 223 --KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEATQVVG 300 (508)
Q Consensus 223 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (508)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+...... ...+... ...++...++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----FHSIRMD--NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHHcC--CCCCCccCCHHHHH
Confidence 345789999999999999999999999999999999999988754322111 1111111 12344556788999
Q ss_pred HHHHhcccCCCCCCChH-HHHHH
Q 010529 301 LASQCLQYEPRERPSTK-NLVVT 322 (508)
Q Consensus 301 l~~~cl~~~p~~Rps~~-~il~~ 322 (508)
|+.+||..||.+|||+. ++++|
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999995 78765
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-50 Score=389.97 Aligned_cols=255 Identities=18% Similarity=0.259 Sum_probs=211.5
Q ss_pred CcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcc
Q 010529 70 SSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~ 141 (508)
++|++.+.||+|+||.||+|++. +++.||||+++..... ....|.+|+.+++.+ +|||||+++++|.+....
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 57788899999999999999852 3568999999765432 244689999999999 799999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccC----------------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWE----------------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDED 205 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~ 205 (508)
+||||||++|+|.+++.... ...+++..+..++.||+.||.|||+++ +|||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccccccccccccc
Confidence 99999999999999986432 235899999999999999999999999 9999999999999999
Q ss_pred CCeEEcccCCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchh
Q 010529 206 GDPRLSCFGLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLN 279 (508)
Q Consensus 206 ~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~ 279 (508)
+.+||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+|++.|+..... ....+.
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~---~~~~~~ 258 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---VDSKFY 258 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC---SSHHHH
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC---HHHHHH
Confidence 99999999999866543 234678999999999999999999999999999999996656543211 111123
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 280 LLMDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
.++........+...+..+.+||.+||+.||.+|||+.+|++.|+++..
T Consensus 259 ~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 3344444444555667889999999999999999999999999987653
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=388.40 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=208.6
Q ss_pred CCcccccccCCCCcccEEEEEEEc------CCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcc
Q 010529 69 FSSDNIVSESGEKAANVVYKGRLE------NRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDER 141 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 141 (508)
++++++++.||+|+||+||+|.+. +++.||||+++..... ....|.+|+.++++++|||||+++|+|..++..
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 98 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 98 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence 467788999999999999999863 2578999999754322 234689999999999999999999999999999
Q ss_pred eeeeecCCCCCHHHHhhccC--------CCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEccc
Q 010529 142 LLVAEYMPNDTLAKHLFHWE--------KQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCF 213 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Df 213 (508)
++|||||++|+|.+++.... ...+++..+..++.|+++||.|||+++ |+||||||+|||++.++++||+||
T Consensus 99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCT
T ss_pred eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeec
Confidence 99999999999999886421 234788999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC
Q 010529 214 GLMKNSMDG------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE 287 (508)
Q Consensus 214 g~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (508)
|+++..... ....+|+.|+|||.+.++.++.++||||||+++|||+||..+|...... ......+.+ ...
T Consensus 178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~---~~~~~~i~~-~~~ 253 (308)
T d1p4oa_ 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---EQVLRFVME-GGL 253 (308)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---HHHHHHHHT-TCC
T ss_pred ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHh-CCC
Confidence 999865432 2335789999999999999999999999999999999997555432211 011111112 222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 288 GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 288 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
...+..+++.+.+|+.+||+.||.+|||+.+|+++|+....
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 33445567889999999999999999999999999977643
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-50 Score=384.63 Aligned_cols=246 Identities=19% Similarity=0.162 Sum_probs=193.2
Q ss_pred ccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC-----hhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 74 IVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD-----PTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 74 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
.++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 357789999999999995 569999999986543221 34689999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
|.|+++..+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99887766553 4567999999999999999999999999 999999999999999999999999999765443 3
Q ss_pred ccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-----------cchh---hhhccc---
Q 010529 224 SYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-----------ENLN---LLMDSH--- 285 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-----------~~~~---~~~~~~--- 285 (508)
...||+.|+|||++.+ ..++.++|||||||++|||+||..||.......... .... ......
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 4568999999999865 457999999999999999999997775432110000 0000 000000
Q ss_pred cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 286 LEGKFS-----SEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 286 ~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.....+ ...++++.+|+.+||..||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 000011 1235789999999999999999999999987
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-49 Score=379.28 Aligned_cols=251 Identities=22% Similarity=0.276 Sum_probs=198.4
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
++|+++++||+|+||+||+|+. .+|+.||||+++.... ...+++.+|+++|++++|||||++++++.+++..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 5788999999999999999995 6699999999965432 235689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
|+.+ ++.+++.......+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9965 4555555445677999999999999999999999999 999999999999999999999999999755432
Q ss_pred CccccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhhhcc-----ccCCC
Q 010529 223 KSYSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLLMDS-----HLEGK 289 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~~~~-----~~~~~ 289 (508)
....||+.|+|||++.... ++.++|||||||++|+|++|+.||......... +......... .....
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999987655 478999999999999999999887543211000 0000000000 00000
Q ss_pred -----------CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 290 -----------FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 290 -----------~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.....++++.+|+.+||..||.+|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 001235778999999999999999999999987
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.5e-49 Score=376.97 Aligned_cols=250 Identities=19% Similarity=0.239 Sum_probs=199.6
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeeec
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAEY 147 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E~ 147 (508)
++|+++++||+|+||+||+|+.++|+.||||++..... ...+++.+|+.+|++++|||||++++++.+.+..++|||+
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 57899999999999999999998999999999965432 2356899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----C
Q 010529 148 MPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG----K 223 (508)
Q Consensus 148 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 223 (508)
+.++.+..+.. ..+.+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||.+...... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98776666654 4577999999999999999999999999 999999999999999999999999998765433 3
Q ss_pred ccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhh-----h--c----cc---hhhhh------
Q 010529 224 SYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-----R--G----EN---LNLLM------ 282 (508)
Q Consensus 224 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----~--~----~~---~~~~~------ 282 (508)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||........ . + .. .....
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 44688999999998754 568999999999999999999988754311000 0 0 00 00000
Q ss_pred ---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 283 ---DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 283 ---~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
............++.+.+|+.+||..||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000011122345778999999999999999999999876
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-50 Score=379.66 Aligned_cols=238 Identities=21% Similarity=0.314 Sum_probs=198.2
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC------ChhHHHHHHHHhccCC--CCCCcceeeeeeeCCc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP------DPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~ 140 (508)
++|++.+.||+|+||+||+|+. .+|+.||||++...... ...++.+|+.+|++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 4688999999999999999995 57899999999754322 2345789999999986 8999999999999999
Q ss_pred ceeeeecCCC-CCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-CCCeEEcccCCccc
Q 010529 141 RLLVAEYMPN-DTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-DGDPRLSCFGLMKN 218 (508)
Q Consensus 141 ~~lv~E~~~~-~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~Dfg~a~~ 218 (508)
.++||||+.+ +++.+++.. ...+++.++..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 578787763 457999999999999999999999999 999999999999984 57899999999986
Q ss_pred cCCC--CccccCCCCCCccccccCCc-CccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCHHHH
Q 010529 219 SMDG--KSYSTNLAYTPPEYLKNGRV-IPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSSEEA 295 (508)
Q Consensus 219 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||.... ..... . ..++...+
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-~i~~~---------~--~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-EIIRG---------Q--VFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-HHHHC---------C--CCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-HHhhc---------c--cCCCCCCC
Confidence 5443 45679999999999987665 567999999999999999998875431 11111 0 11233456
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 296 TQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 296 ~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+++.+|+.+||..||.+|||+.|+++|
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 779999999999999999999999976
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-49 Score=381.32 Aligned_cols=251 Identities=18% Similarity=0.235 Sum_probs=193.9
Q ss_pred cccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHH--HHHHhccCCCCCCcceeeeeeeCC----cceee
Q 010529 71 SDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKE--EAEGVGKLRRKRLANLIGYCCAGD----ERLLV 144 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~--E~~~l~~l~h~nIv~~~~~~~~~~----~~~lv 144 (508)
+|.+.++||+|+||+||+|++ +|+.||||+++... ...+.+ |+..+..++|||||+++++|.+.+ .++||
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv 79 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence 356678899999999999997 57789999996432 334444 444556789999999999998654 57899
Q ss_pred eecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh--------CCCceeecCCCcceeeCCCCCeEEcccCCc
Q 010529 145 AEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT--------EGRPLYHDLNAYRVLFDEDGDPRLSCFGLM 216 (508)
Q Consensus 145 ~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~--------~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a 216 (508)
||||++|+|.+++.. ..+++..++.++.|++.||.|||+ ++ |+||||||+||||+.++.+||+|||++
T Consensus 80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~ 155 (303)
T d1vjya_ 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCcc
Confidence 999999999999963 469999999999999999999997 46 999999999999999999999999998
Q ss_pred cccCCC--------CccccCCCCCCccccccC------CcCccccchhhHHHHHHHHhCCCCCCchhhh------hhh-c
Q 010529 217 KNSMDG--------KSYSTNLAYTPPEYLKNG------RVIPESVIYSFGTVLLDLLSGKHIPPSHALD------MIR-G 275 (508)
Q Consensus 217 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg~~~~~~~~~~------~~~-~ 275 (508)
+..... ....||+.|+|||++.+. .++.++|||||||+||||+||..|+...... ... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T d1vjya_ 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence 755332 235689999999998753 3677999999999999999998654321100 000 0
Q ss_pred cc----hhhhhccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcC
Q 010529 276 EN----LNLLMDSHLEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTK 329 (508)
Q Consensus 276 ~~----~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~ 329 (508)
.. ..........+.+ .......+.+|+.+||..||.+|||+.||++.|+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 00 1111222222222 224567799999999999999999999999999998754
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-48 Score=375.79 Aligned_cols=251 Identities=20% Similarity=0.233 Sum_probs=196.9
Q ss_pred CcccccccCCCCcccEEEEEEE-cC-CCEEEEEEecCCCC--CChhHHHHHHHHhccC---CCCCCcceeeeeee-----
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-EN-RQWIAVKKFTKVAW--PDPTQFKEEAEGVGKL---RRKRLANLIGYCCA----- 137 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~~~~~~~~----- 137 (508)
++|+++++||+|+||+||+|+. .+ ++.||||+++.... .....+.+|+.+|+.| +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 5789999999999999999996 44 66799999865322 2344677888887776 79999999999853
Q ss_pred CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 138 GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 138 ~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
....+++|||+.++++.... ......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhh
Confidence 34679999999877665433 335667999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhcc-------chh--------
Q 010529 218 NSMDG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGE-------NLN-------- 279 (508)
Q Consensus 218 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-------~~~-------- 279 (508)
..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||........... ...
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65433 456789999999999999999999999999999999999988764321100000 000
Q ss_pred ---hhhcc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 280 ---LLMDS---HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 280 ---~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..... .....+....++.+.+|+.+||+.||.+|||+.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 00011223346778999999999999999999999987
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-47 Score=372.16 Aligned_cols=248 Identities=16% Similarity=0.214 Sum_probs=192.5
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeCC------c
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAGD------E 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------~ 140 (508)
+.|++++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|+.++|||||+++++|...+ .
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 4688999999999999999995 569999999997543222 357889999999999999999999997654 4
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
.||||||| +.+|..++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccC
Confidence 69999999 678888774 457999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC-CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccc--------------
Q 010529 221 DG-KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GEN-------------- 277 (508)
Q Consensus 221 ~~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~-------------- 277 (508)
.. ....||+.|+|||++.+. .++.++|||||||++|+|++|+.|+......... +..
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 54 456789999999998764 5688999999999999999999887543110000 000
Q ss_pred -hhhhhccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 278 -LNLLMDSHLE---GKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 278 -~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.......... .......++.+.+|+.+||..||.+|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 01122345678999999999999999999999988
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-47 Score=365.45 Aligned_cols=255 Identities=19% Similarity=0.193 Sum_probs=195.2
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCC--CChhHHHHHHHHhccCCCCCCcceeeeeee------
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAW--PDPTQFKEEAEGVGKLRRKRLANLIGYCCA------ 137 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------ 137 (508)
+..++|+++++||+|+||+||+|+. .+|+.||||++..... ....++.+|+.+|++++||||+++++++..
T Consensus 7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp CBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred CccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 3457889999999999999999995 5799999999865432 235679999999999999999999999855
Q ss_pred --CCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCC
Q 010529 138 --GDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGL 215 (508)
Q Consensus 138 --~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~ 215 (508)
....++||||+.++++..... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecce
Confidence 345799999998776654443 4567899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-------cchh
Q 010529 216 MKNSMDG--------KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-------ENLN 279 (508)
Q Consensus 216 a~~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------~~~~ 279 (508)
+...... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+........ ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9754422 234689999999998764 68999999999999999999998875431111000 0000
Q ss_pred hh------------hccccCCCCCH-------HHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 010529 280 LL------------MDSHLEGKFSS-------EEATQVVGLASQCLQYEPRERPSTKNLVVTLA 324 (508)
Q Consensus 280 ~~------------~~~~~~~~~~~-------~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~ 324 (508)
.. ........... ..++.+.+|+.+||..||++|||+.|+++|=+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence 00 00000000011 11456789999999999999999999998854
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-47 Score=372.00 Aligned_cols=252 Identities=22% Similarity=0.264 Sum_probs=193.3
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcceeeeeeeC------Cccee
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANLIGYCCAG------DERLL 143 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~~~l 143 (508)
+|+.++.||+|+||+||+|+. .+|+.||||++.... ..+.+|+.+|++++|||||+++++|... .+.+|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 467788899999999999995 569999999997543 2345899999999999999999998643 24689
Q ss_pred eeecCCCCCHHHHhh-ccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCC
Q 010529 144 VAEYMPNDTLAKHLF-HWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMD 221 (508)
Q Consensus 144 v~E~~~~~sL~~~l~-~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~ 221 (508)
|||||+++.+..+.. ......+++.++..|+.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++.....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999997654333322 124567999999999999999999999999 99999999999999775 899999999986544
Q ss_pred C---CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhh-------ccchhhhh--------
Q 010529 222 G---KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR-------GENLNLLM-------- 282 (508)
Q Consensus 222 ~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------~~~~~~~~-------- 282 (508)
. ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... +......+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3 34578999999998765 56899999999999999999999887543211000 00000000
Q ss_pred --------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH--HHHhh
Q 010529 283 --------DSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT--LARLQ 327 (508)
Q Consensus 283 --------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~--L~~~~ 327 (508)
............++++.+|+.+||..||.+|||+.|+++| ++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 0000001122346779999999999999999999999987 44443
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=370.96 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=190.8
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC-ChhHHHHHHHHhccCCCCCCcceeeeeeeCCc----cee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP-DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDE----RLL 143 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~----~~l 143 (508)
+.|++++.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|+.+|+.++||||+++++++..... .++
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 3589999999999999999994 67999999999754321 24578999999999999999999999876532 344
Q ss_pred eeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC-
Q 010529 144 VAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 144 v~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~- 222 (508)
+++++.|++|.+++. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||++......
T Consensus 88 l~~~~~~g~L~~~l~---~~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 88 LVTHLMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EEEECCCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEEeecCCchhhhhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 555666999999995 346999999999999999999999999 999999999999999999999999998754332
Q ss_pred ------CccccCCCCCCcccccc-CCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccc------------------
Q 010529 223 ------KSYSTNLAYTPPEYLKN-GRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGEN------------------ 277 (508)
Q Consensus 223 ------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~------------------ 277 (508)
....||+.|+|||++.. ..++.++||||+||++|+|++|+.||............
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence 34468899999999854 56788999999999999999999887543110000000
Q ss_pred -hhhhhccc-cCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 278 -LNLLMDSH-LEGKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 278 -~~~~~~~~-~~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
........ ..... ....+.++.+|+.+||..||.+|||+.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000000 00001 11234678999999999999999999999987
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.2e-46 Score=358.75 Aligned_cols=255 Identities=15% Similarity=0.117 Sum_probs=203.6
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCC-CCCcceeeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRR-KRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
.|++++.||+|+||+||+|+. .+|+.||||++.... +...+.+|+++++.+.| +||+.+++++..+...++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 578999999999999999995 468899999986543 34568899999999965 89999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCC-----CCCeEEcccCCccccCCC-
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDE-----DGDPRLSCFGLMKNSMDG- 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~-----~~~~kl~Dfg~a~~~~~~- 222 (508)
+++|.+++.. ....+++.++..++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+|+.....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 7899998864 4567999999999999999999999999 999999999999964 578999999999754321
Q ss_pred ----------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh--hccchhhhhccccCCCC
Q 010529 223 ----------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI--RGENLNLLMDSHLEGKF 290 (508)
Q Consensus 223 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 290 (508)
....||+.|||||++.+..++.++|||||||++|||+||+.||........ ....+............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 245689999999999999999999999999999999999988753211000 00000000000000011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhcCC
Q 010529 291 SSEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQTKS 330 (508)
Q Consensus 291 ~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~~~ 330 (508)
....++++.+++..|+..+|++||++..+.+.|..+....
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 1234567999999999999999999999999888875543
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.8e-47 Score=369.18 Aligned_cols=247 Identities=18% Similarity=0.204 Sum_probs=197.0
Q ss_pred cCCCcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeC--Ccce
Q 010529 67 NNFSSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAG--DERL 142 (508)
Q Consensus 67 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~--~~~~ 142 (508)
.+.++|+++++||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+.+|+.+ .||||+++++++... ...+
T Consensus 32 ~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~ 108 (328)
T d3bqca1 32 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108 (328)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred CCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence 3456799999999999999999995 56999999999643 357899999999999 499999999998743 4689
Q ss_pred eeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCC-CeEEcccCCccccCC
Q 010529 143 LVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDG-DPRLSCFGLMKNSMD 221 (508)
Q Consensus 143 lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~Dfg~a~~~~~ 221 (508)
+|||||.+++|..+. +.+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||++.....
T Consensus 109 ~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 109 LVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 182 (328)
T ss_dssp EEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred EEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccC
Confidence 999999999987654 36999999999999999999999999 99999999999998655 599999999986654
Q ss_pred C---CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhh------------------c---c
Q 010529 222 G---KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIR------------------G---E 276 (508)
Q Consensus 222 ~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~------------------~---~ 276 (508)
. ....+|+.|+|||.+.+. .++.++|||||||++++|++|+.|+......... . .
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 262 (328)
T d3bqca1 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262 (328)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence 3 445689999999998765 4789999999999999999999887542110000 0 0
Q ss_pred ---chhhh--------hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 277 ---NLNLL--------MDSHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 277 ---~~~~~--------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
..... .............++++.+||.+||..||.+|||+.|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000 00011111223346789999999999999999999999986
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1e-46 Score=361.17 Aligned_cols=252 Identities=13% Similarity=0.107 Sum_probs=196.0
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCCcce-eeeeeeCCcceeeeecC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRLANL-IGYCCAGDERLLVAEYM 148 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~-~~~~~~~~~~~lv~E~~ 148 (508)
.|++++.||+|+||+||+|+. .+|+.||||++.... ...++..|+++++.++|+|++.. .+++.+.+..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 588999999999999999995 568899999987543 33568999999999987765555 45556777889999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeC---CCCCeEEcccCCccccCCC---
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFD---EDGDPRLSCFGLMKNSMDG--- 222 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~--- 222 (508)
+++|...+.. ....+++..+..++.|++.||+|||+++ ||||||||+|||++ .+..+||+|||+|+.....
T Consensus 86 -~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred -CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 5667666643 5567999999999999999999999999 99999999999985 4557999999999865432
Q ss_pred --------CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccC---CCCC
Q 010529 223 --------KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLE---GKFS 291 (508)
Q Consensus 223 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 291 (508)
....||+.|+|||++.+..++.++|||||||++|||+||+.||......... ............ ....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMSTPIEVLC 241 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHSCHHHHT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHH-HHHHHhhcccCCCChhHhc
Confidence 2346899999999999989999999999999999999999887543211110 001000000000 0112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHHhhc
Q 010529 292 SEEATQVVGLASQCLQYEPRERPSTKNLVVTLARLQT 328 (508)
Q Consensus 292 ~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~L~~~~~ 328 (508)
..+++++.+|+.+||+.+|.+||++.++.+.|+.+..
T Consensus 242 ~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 242 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 2345779999999999999999999999888887643
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-46 Score=358.60 Aligned_cols=250 Identities=18% Similarity=0.214 Sum_probs=201.7
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCC--ChhHHHHHHHHhccCCCCCCcceeeeeeeCCcceeeee
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWP--DPTQFKEEAEGVGKLRRKRLANLIGYCCAGDERLLVAE 146 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~E 146 (508)
++|+++++||+|+||+||+|+. .+++.||||+++..... ...++.+|+.+|+.++||||+++++++.+....++|||
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 5789999999999999999995 57899999999755432 24689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCCC----
Q 010529 147 YMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMDG---- 222 (508)
Q Consensus 147 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~---- 222 (508)
++.+++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.+......
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999998888775 5667899999999999999999999999 999999999999999999999999999865543
Q ss_pred CccccCCCCCCccccccCC-cCccccchhhHHHHHHHHhCCCCCCchhhhh--hh------cc----c---hhhhhc---
Q 010529 223 KSYSTNLAYTPPEYLKNGR-VIPESVIYSFGTVLLDLLSGKHIPPSHALDM--IR------GE----N---LNLLMD--- 283 (508)
Q Consensus 223 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--~~------~~----~---~~~~~~--- 283 (508)
....+++.|+|||++.+.. ++.++|||||||++|||++|+.||....... .. .. . ......
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 2335678899999987655 6889999999999999999998864321100 00 00 0 000000
Q ss_pred ------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 284 ------SHLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 284 ------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
...........++.+.+|+.+||+.||.+|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000011223446778999999999999999999999987
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-47 Score=365.75 Aligned_cols=249 Identities=18% Similarity=0.236 Sum_probs=201.4
Q ss_pred CCcccccccCCCCcccEEEEEEE-c---CCCEEEEEEecCCC----CCChhHHHHHHHHhccCCC-CCCcceeeeeeeCC
Q 010529 69 FSSDNIVSESGEKAANVVYKGRL-E---NRQWIAVKKFTKVA----WPDPTQFKEEAEGVGKLRR-KRLANLIGYCCAGD 139 (508)
Q Consensus 69 ~~~~~~~~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~~ 139 (508)
.++|++++.||+|+||+||+|+. . +|+.||||+++... ....+.+.+|+++|++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 46789999999999999999984 2 47899999986432 2335678999999999966 89999999999999
Q ss_pred cceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCcccc
Q 010529 140 ERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNS 219 (508)
Q Consensus 140 ~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 219 (508)
..++||||+.|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhh
Confidence 99999999999999999873 456788999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CccccCCCCCCccccccC--CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhccchhhhhccccCCCCCH
Q 010529 220 MDG-----KSYSTNLAYTPPEYLKNG--RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRGENLNLLMDSHLEGKFSS 292 (508)
Q Consensus 220 ~~~-----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
... ....|++.|++||.+.+. .++.++|||||||+||+|+||+.||.................. .....+.
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~ 257 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 257 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcc
Confidence 432 345689999999999754 4678999999999999999999887543211110010111111 1223445
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----hHHHHHH
Q 010529 293 EEATQVVGLASQCLQYEPRERPS-----TKNLVVT 322 (508)
Q Consensus 293 ~~~~~l~~l~~~cl~~~p~~Rps-----~~~il~~ 322 (508)
..++++.+|+.+||..||.+||| +.|+++|
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 67888999999999999999994 7888876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-45 Score=360.92 Aligned_cols=247 Identities=16% Similarity=0.192 Sum_probs=188.6
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeC------Cc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAG------DE 140 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~ 140 (508)
.+|+++++||+|+||+||+|+. .+|+.||||++....... ..++.+|+.+|++++|||||+++++|... ..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 4689999999999999999995 469999999997554322 34688999999999999999999998643 57
Q ss_pred ceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccC
Q 010529 141 RLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSM 220 (508)
Q Consensus 141 ~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 220 (508)
+|+|||||.++ |.+.+ ...+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+|++|||+++...
T Consensus 97 ~~iv~Ey~~~~-l~~~~----~~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 97 VYLVMELMDAN-LCQVI----QMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEECCSEE-HHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eEEEEeccchH-HHHhh----hcCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhccc
Confidence 79999999765 44444 245899999999999999999999999 9999999999999999999999999987655
Q ss_pred CC---CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc----------------------
Q 010529 221 DG---KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG---------------------- 275 (508)
Q Consensus 221 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---------------------- 275 (508)
.. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||.+........
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 43 34568999999999999999999999999999999999998875431110000
Q ss_pred -----------cchhhhhccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 276 -----------ENLNLLMDSHLEGK---FSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 276 -----------~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
.............. .....++++.+|+.+||..||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000111111111 123457889999999999999999999999988
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-46 Score=362.56 Aligned_cols=249 Identities=16% Similarity=0.177 Sum_probs=193.0
Q ss_pred CcccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCC--hhHHHHHHHHhccCCCCCCcceeeeeeeC-----Ccc
Q 010529 70 SSDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPD--PTQFKEEAEGVGKLRRKRLANLIGYCCAG-----DER 141 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~ 141 (508)
++|++++.||+|+||+||+|+. .+|+.||||++....... .+++.+|+.+|+.++|||||++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 4689999999999999999994 579999999997554322 34688999999999999999999998643 334
Q ss_pred eeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccCCccccCC
Q 010529 142 LLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSMD 221 (508)
Q Consensus 142 ~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~ 221 (508)
++||+|+.||+|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+|++|||++.....
T Consensus 98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCc
Confidence 67777888999999984 457999999999999999999999999 99999999999999999999999999875543
Q ss_pred C-CccccCCCCCCccccccC-CcCccccchhhHHHHHHHHhCCCCCCchhhhhhhc-------cc------------hhh
Q 010529 222 G-KSYSTNLAYTPPEYLKNG-RVIPESVIYSFGTVLLDLLSGKHIPPSHALDMIRG-------EN------------LNL 280 (508)
Q Consensus 222 ~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------~~------------~~~ 280 (508)
. ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+........ .. ...
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 3 455688999999987765 46889999999999999999998876431110000 00 000
Q ss_pred hhccccC-CCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 281 LMDSHLE-GKF-----SSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 281 ~~~~~~~-~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
....... ... ....++++.+||.+||..||.+|||+.|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 0000000 000 01235678999999999999999999999987
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.9e-40 Score=324.41 Aligned_cols=250 Identities=17% Similarity=0.185 Sum_probs=189.3
Q ss_pred cccccccCCCCcccEEEEEEE-cCCCEEEEEEecCCCCCChhHHHHHHHHhccCC-----------CCCCcceeeeeeeC
Q 010529 71 SDNIVSESGEKAANVVYKGRL-ENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-----------RKRLANLIGYCCAG 138 (508)
Q Consensus 71 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~~~~~~~~~ 138 (508)
+|+++++||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+.+++.+. |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 489999999999999999995 5799999999975421 2356788999888875 57899999988653
Q ss_pred --CcceeeeecCCCC-CHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHh-CCCceeecCCCcceeeCCCCC------e
Q 010529 139 --DERLLVAEYMPND-TLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNT-EGRPLYHDLNAYRVLFDEDGD------P 208 (508)
Q Consensus 139 --~~~~lv~E~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~~iiH~Dikp~Nill~~~~~------~ 208 (508)
...+++|+++..+ +............+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccccee
Confidence 3455666665443 33344444466789999999999999999999998 77 999999999999976543 8
Q ss_pred EEcccCCccccCCC-CccccCCCCCCccccccCCcCccccchhhHHHHHHHHhCCCCCCchhhhhh-------------h
Q 010529 209 RLSCFGLMKNSMDG-KSYSTNLAYTPPEYLKNGRVIPESVIYSFGTVLLDLLSGKHIPPSHALDMI-------------R 274 (508)
Q Consensus 209 kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-------------~ 274 (508)
+++|||.+...... ....||+.|+|||++.+..++.++||||+||++++|++|+.||........ .
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 99999998755443 455789999999999999999999999999999999999988653211000 0
Q ss_pred cc----------chhhhhc------c-------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 010529 275 GE----------NLNLLMD------S-------------HLEGKFSSEEATQVVGLASQCLQYEPRERPSTKNLVVT 322 (508)
Q Consensus 275 ~~----------~~~~~~~------~-------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~~il~~ 322 (508)
+. ....... . ..........++++.+|+.+||..||.+|||+.|+++|
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 0000000 0 00112345678899999999999999999999999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=3.4e-25 Score=196.07 Aligned_cols=163 Identities=17% Similarity=0.084 Sum_probs=120.5
Q ss_pred cccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCC-----C-------------hhHHHHHHHHhccCCCCCCcceeee
Q 010529 73 NIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWP-----D-------------PTQFKEEAEGVGKLRRKRLANLIGY 134 (508)
Q Consensus 73 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~E~~~l~~l~h~nIv~~~~~ 134 (508)
.+.++||+|+||+||+|+..+|+.||||+++..... . ......|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 456789999999999999888999999987642211 0 1234568889999999999998866
Q ss_pred eeeCCcceeeeecCCCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCCCceeecCCCcceeeCCCCCeEEcccC
Q 010529 135 CCAGDERLLVAEYMPNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEGRPLYHDLNAYRVLFDEDGDPRLSCFG 214 (508)
Q Consensus 135 ~~~~~~~~lv~E~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~~iiH~Dikp~Nill~~~~~~kl~Dfg 214 (508)
. ..++||||+++..+.+ ++......++.|++.+|.|||+++ |+||||||+|||++++ .++|+|||
T Consensus 83 ~----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~-~~~liDFG 147 (191)
T d1zara2 83 E----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEE-GIWIIDFP 147 (191)
T ss_dssp E----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETT-EEEECCCT
T ss_pred c----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCC-CEEEEECC
Confidence 3 2479999998765432 445566789999999999999999 9999999999999865 48999999
Q ss_pred CccccCCCCccccCCCCCC------ccccccCCcCccccchhhHHHH
Q 010529 215 LMKNSMDGKSYSTNLAYTP------PEYLKNGRVIPESVIYSFGTVL 255 (508)
Q Consensus 215 ~a~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~~Dv~slG~vl 255 (508)
+|......... .|.. .+.+ ...|+.++|+||..--+
T Consensus 148 ~a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 148 QSVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp TCEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred CcccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 99765433211 0110 0111 35678899999965433
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.6e-20 Score=151.46 Aligned_cols=107 Identities=21% Similarity=0.294 Sum_probs=102.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+.+++.+|+.++..|+|++|+..|+++|+.+|. ++.+|+++|.||..+|++++|+.+|+++++++|+++.+|+++|.++
T Consensus 3 ~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 81 (117)
T d1elwa_ 3 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 81 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHH
Confidence 566789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCccccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
..+|+|++|+.+|++|++++|.+...+.
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 109 (117)
T d1elwa_ 82 EFLNRFEEAKRTYEEGLKHEANNPQLKE 109 (117)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999876543
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=3.8e-19 Score=151.87 Aligned_cols=109 Identities=23% Similarity=0.296 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 010529 395 QMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQ 474 (508)
Q Consensus 395 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 474 (508)
.+..+..+..+|+.++..|+|++|+..|+++++++|. ++.+|+++|.||+.+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 3466888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 475 SVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 475 g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|.++..+|+|++|+.+|++|++++|.|...
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~ 114 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDA 114 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999999999999999998654
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=2.2e-19 Score=159.40 Aligned_cols=106 Identities=20% Similarity=0.285 Sum_probs=102.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+..+..+|+.++..|+|++|+..|++||+++|. ++.+|+++|.||..+|++++|+.+|++||+++|+++.+|+++|.+|
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~ 82 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 567889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+|+|++|+.+|++|++++|.+...+
T Consensus 83 ~~l~~~~~A~~~~~~al~l~p~~~~~~ 109 (201)
T d2c2la1 83 LEMESYDEAIANLQRAYSLAKEQRLNF 109 (201)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHCCCHHHHHHHHHHHHHhCcccHHHH
Confidence 999999999999999999999876554
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.76 E-value=2.4e-18 Score=145.61 Aligned_cols=112 Identities=15% Similarity=0.202 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc---------------ChHHHhhHHHHHHhhCCHHHHHHHHH
Q 010529 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV---------------SPTVYARRSLCHLFSDRSDAALLDAM 458 (508)
Q Consensus 394 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~ 458 (508)
+.+..+..+..+|+.+|..|+|.+|+..|++||++.+.. ...+|+|+|.||+++|++++|+.+|+
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~ 91 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 91 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhh
Confidence 455668889999999999999999999999999876642 12478999999999999999999999
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 459 QAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 459 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|.|....
T Consensus 92 ~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 92 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999987643
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.74 E-value=5.6e-18 Score=146.03 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=109.3
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHh----------------cCCCcChHHHhhHHHH
Q 010529 380 DDKETHELSFQEWTQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFIN----------------VNIMVSPTVYARRSLC 443 (508)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~ 443 (508)
+-+++......+....+..+..+...|+.++..|+|++|++.|++||+ ++|. +..+|+|+|.|
T Consensus 8 d~p~d~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~ 86 (169)
T d1ihga1 8 DFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGAC 86 (169)
T ss_dssp SSGGGSSSCTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHH
T ss_pred CCchhhHHCHhhHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHH
Confidence 334445555555666666677889999999999999999999999985 3566 77889999999
Q ss_pred HHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 444 HLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 444 ~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|.++|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+|...
T Consensus 87 ~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~ 147 (169)
T d1ihga1 87 KLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAI 147 (169)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHhhcccchhhhhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999998654
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.4e-17 Score=143.36 Aligned_cols=111 Identities=13% Similarity=0.114 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc--------------ChHHHhhHHHHHHhhCCHHHHHHHHHH
Q 010529 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV--------------SPTVYARRSLCHLFSDRSDAALLDAMQ 459 (508)
Q Consensus 394 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~ 459 (508)
+.+..+..+...|+.+|..|+|++|+..|++||++.|.. ...+|+|+|.||+++|+|++|+.++++
T Consensus 8 ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~ 87 (170)
T d1p5qa1 8 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 87 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhh
Confidence 344567888999999999999999999999999987762 125689999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 460 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+|...
T Consensus 88 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~ 132 (170)
T d1p5qa1 88 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAA 132 (170)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred hhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999999999999999999999999999999998654
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.72 E-value=2.2e-17 Score=142.03 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc--------------ChHHHhhHHHHHHhhCCHHHHHHHHHH
Q 010529 394 QQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV--------------SPTVYARRSLCHLFSDRSDAALLDAMQ 459 (508)
Q Consensus 394 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~ 459 (508)
+.+..+..+..+|+.+|..|+|.+|+..|++||.+.+.. ...+|+|+|.||..+|++++|+.+|++
T Consensus 10 E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~ 89 (168)
T d1kt1a1 10 EKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 89 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhh
Confidence 355668889999999999999999999999999765441 235689999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 460 AQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 460 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+|+++|++..+|+++|.+|..+|+|++|+.+|.+|++++|+|...
T Consensus 90 al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~ 134 (168)
T d1kt1a1 90 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAA 134 (168)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHH
T ss_pred hhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999999999999999999999999999999998754
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=5.3e-17 Score=132.68 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=95.8
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcH-------HH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWP-------TA 470 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~a 470 (508)
++..+++.|+.++..|+|++|+.+|+++|+++|. ++.+|+++|.||..+|+|++|+.+|++||+++|++. .+
T Consensus 3 ~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~ 81 (128)
T d1elra_ 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (128)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4778899999999999999999999999999999 999999999999999999999999999999998875 47
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 471 FYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 471 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
|+++|.++..++++++|+.+|++++..++..
T Consensus 82 ~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 7788889999999999999999999887653
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=5.1e-16 Score=136.29 Aligned_cols=102 Identities=15% Similarity=0.082 Sum_probs=94.7
Q ss_pred HHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
.++..+.++|..++..|+|++|++.|++ +.|. ++.+|+|+|.+|..+|++++|+++|++||+++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~---i~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSA---VQDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHT---SSSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHh---cCCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 3466778999999999999999999986 4667 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 477 ALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 477 ~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
++..+|+|++|+.+|++|++..+.|.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n~ 104 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGNQ 104 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHhhccHHHHHHHHHHHHHhCccCc
Confidence 99999999999999999999877764
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.65 E-value=4.5e-16 Score=123.77 Aligned_cols=93 Identities=10% Similarity=0.044 Sum_probs=90.5
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
....|..++..|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+.+|++|++++|++..+|+.+|.+|..+
T Consensus 19 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~~ 97 (112)
T d1hxia_ 19 PMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 97 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHHC
Confidence 367899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHh
Q 010529 482 DMQKDAADMLLEGA 495 (508)
Q Consensus 482 ~~~~~A~~~~~~a~ 495 (508)
|++++|+++|+++|
T Consensus 98 g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 98 HNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999999986
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=1e-15 Score=140.89 Aligned_cols=105 Identities=17% Similarity=-0.013 Sum_probs=101.3
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..++..|..++..|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 36 ~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 114 (259)
T d1xnfa_ 36 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 114 (259)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHHH
Confidence 4677899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
|..+|++++|+..|+++++++|.+..
T Consensus 115 ~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 115 LYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhhHHHHHHHHHHHHhhccccHH
Confidence 99999999999999999999998653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=6.1e-16 Score=124.52 Aligned_cols=102 Identities=8% Similarity=-0.014 Sum_probs=92.4
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhh---CCHHHHHHHHHHHHHhCCCc--HHHHHHHHHH
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFS---DRSDAALLDAMQAQCAHPDW--PTAFYMQSVA 477 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~---~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~ 477 (508)
.+..+.+...+++++|.+.|+++|+++|. ++.+++|+|.|+... +++++|+..++++++.+|+. .++||++|.+
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~ 81 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 45677888999999999999999999999 999999999999874 45668999999999999866 5699999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
|..+|+|++|+++|++|++++|.|..+.
T Consensus 82 y~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 82 NYRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999999999999999987653
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.59 E-value=2.8e-15 Score=126.88 Aligned_cols=110 Identities=15% Similarity=0.117 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------------hHHHhhHHHHHHhhCCHHHHHHHHHHHHH
Q 010529 395 QMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------------PTVYARRSLCHLFSDRSDAALLDAMQAQC 462 (508)
Q Consensus 395 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 462 (508)
++.++..+...|+..+..|+|++|+..|++||++.|. . +.+|+|+|.||..+|++++|+.+++++|+
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~-~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~ 83 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 83 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChh-hhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhh
Confidence 3455666777899999999999999999999999887 4 36799999999999999999999999998
Q ss_pred hCCC-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 463 AHPD-----------WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 463 ~~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+.|. +..+|+++|.+|..+|++++|+++|++|+++.|+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 84 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred cccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 8542 456899999999999999999999999999999876543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.57 E-value=1.2e-15 Score=127.33 Aligned_cols=99 Identities=11% Similarity=-0.010 Sum_probs=89.0
Q ss_pred hHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhh----------CCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 010529 407 DTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFS----------DRSDAALLDAMQAQCAHPDWPTAFYMQSV 476 (508)
Q Consensus 407 ~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----------~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 476 (508)
..+-+.+.|++|+..|++|++++|. ++.+++++|.++..+ +++++|+..|++||+++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3455678899999999999999999 999999999999865 55589999999999999999999999999
Q ss_pred HHHHcCC-----------HHHHHHHHHHHhcCccccccccc
Q 010529 477 ALSKLDM-----------QKDAADMLLEGAALEEKRQRGAR 506 (508)
Q Consensus 477 ~~~~~~~-----------~~~A~~~~~~a~~~~p~~~~~~~ 506 (508)
+|..+|+ |++|+++|++|++++|.|..+++
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 9988764 79999999999999999876553
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3.1e-14 Score=124.68 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=94.4
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc-------------
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------------- 467 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------------- 467 (508)
.+++.|.+++..|+|++|++.|++||+++|. ++.+|+++|.+|..+|++++|+.+|++|++..+.+
T Consensus 38 ~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~ 116 (192)
T d1hh8a_ 38 ICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 116 (192)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcc
Confidence 4789999999999999999999999999999 99999999999999999999999999999876542
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccc
Q 010529 468 ---PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 468 ---~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
.++++++|.++..+|++++|++.|.+|+++.|+..
T Consensus 117 ~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~ 154 (192)
T d1hh8a_ 117 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 154 (192)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcc
Confidence 47899999999999999999999999999988753
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=4.9e-14 Score=133.93 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=97.8
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS 479 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 479 (508)
..+...|..+...|++++|+..|++++..+|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|.
T Consensus 173 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 251 (323)
T d1fcha_ 173 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 251 (323)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhcCccccccc
Q 010529 480 KLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 480 ~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.+|++++|+..|++|++++|++...
T Consensus 252 ~~g~~~~A~~~~~~al~l~p~~~~~ 276 (323)
T d1fcha_ 252 NLGAHREAVEHFLEALNMQRKSRGP 276 (323)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTC---
T ss_pred HCCCHHHHHHHHHHHHHhCCcChhh
Confidence 9999999999999999999998654
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.2e-14 Score=136.12 Aligned_cols=108 Identities=6% Similarity=-0.016 Sum_probs=101.9
Q ss_pred HHHHHHHHhhhHHhhhh-hHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 010529 397 RDMLEARKQGDTAFRDK-DFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQS 475 (508)
Q Consensus 397 ~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 475 (508)
.....+..+|.++...| ++++|+..|+++|+++|. +..+|++||.++..+|++++|+.+++++++++|++..+|+++|
T Consensus 75 ~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~ 153 (315)
T d2h6fa1 75 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 153 (315)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHH
Confidence 34778999999988866 699999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 476 VALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 476 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.++..+|++++|+++|++||+++|.|..+|
T Consensus 154 ~~~~~~~~~~~Al~~~~~al~~~p~n~~a~ 183 (315)
T d2h6fa1 154 WVIQEFKLWDNELQYVDQLLKEDVRNNSVW 183 (315)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHCCccHHHH
Confidence 999999999999999999999999998765
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.1e-14 Score=136.26 Aligned_cols=105 Identities=10% Similarity=-0.013 Sum_probs=70.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+..+|.++...|++++|++.|+++|+++|. +..+|+++|.++..+|++++|+.+|+++|+++|++..||+++|.++
T Consensus 112 ~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~-n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~~r~~~l 190 (315)
T d2h6fa1 112 YQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 190 (315)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhc-chHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHHHHHHHH
Confidence 445566666666666666666666666666666 6666666666666666666666666666666666666666666666
Q ss_pred HHcCC------HHHHHHHHHHHhcCccccccc
Q 010529 479 SKLDM------QKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 479 ~~~~~------~~~A~~~~~~a~~~~p~~~~~ 504 (508)
..+++ +++|++.+.+|++++|.|...
T Consensus 191 ~~~~~~~~~~~~~~ai~~~~~al~~~P~~~~~ 222 (315)
T d2h6fa1 191 SNTTGYNDRAVLEREVQYTLEMIKLVPHNESA 222 (315)
T ss_dssp HHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHccccchhhhhHHhHHHHHHHHHhCCCchHH
Confidence 66555 456666666666666666544
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=8.3e-13 Score=125.19 Aligned_cols=102 Identities=12% Similarity=0.122 Sum_probs=97.9
Q ss_pred HHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 402 ARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 402 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
.+.+|..++..|+|++|+..|+++|+.+|. ++.+|+++|.+|..+|++++|+..|++|++++|++..+|+++|.+|..+
T Consensus 22 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 100 (323)
T d1fcha_ 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 100 (323)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccccc
Confidence 357899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCccccccc
Q 010529 482 DMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
|++++|++.|++++.++|.+...
T Consensus 101 ~~~~~A~~~~~~~~~~~~~~~~~ 123 (323)
T d1fcha_ 101 SLQRQACEILRDWLRYTPAYAHL 123 (323)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGG
T ss_pred ccccccccchhhHHHhccchHHH
Confidence 99999999999999999986543
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=9.8e-13 Score=100.53 Aligned_cols=84 Identities=14% Similarity=0.008 Sum_probs=75.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc------ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV------SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFY 472 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 472 (508)
+++.+..|.+++..|+|.+|+..|++|+++.|.. ...++.++|.+|.++|++++|+..|++||+++|++..|++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 4567899999999999999999999999886651 3578999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 010529 473 MQSVALSKLD 482 (508)
Q Consensus 473 ~~g~~~~~~~ 482 (508)
+++.+...++
T Consensus 85 Nl~~~~~~l~ 94 (95)
T d1tjca_ 85 NLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9988776654
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=1.4e-12 Score=125.71 Aligned_cols=106 Identities=9% Similarity=-0.022 Sum_probs=100.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...|++++|+..|++++...|. +...+..+|.++..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 271 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 349 (388)
T d1w3ba_ 271 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL 349 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 455778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 479 SKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 479 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
..+|++++|+.+|++|++++|++..++
T Consensus 350 ~~~g~~~~A~~~~~~al~l~P~~~~a~ 376 (388)
T d1w3ba_ 350 QQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999987654
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=3.7e-12 Score=122.77 Aligned_cols=99 Identities=14% Similarity=0.052 Sum_probs=95.0
Q ss_pred HhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 010529 404 KQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDM 483 (508)
Q Consensus 404 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~ 483 (508)
..|+.+++.|+|++|+..|+++++.+|. ++.+++.+|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|+
T Consensus 4 ~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g~ 82 (388)
T d1w3ba_ 4 ELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQ 82 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhcc
Confidence 4688999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcccccc
Q 010529 484 QKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 484 ~~~A~~~~~~a~~~~p~~~~ 503 (508)
+++|+..|.++++.+|.+..
T Consensus 83 ~~~A~~~~~~~~~~~~~~~~ 102 (388)
T d1w3ba_ 83 LQEAIEHYRHALRLKPDFID 102 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHH
T ss_pred cccccccccccccccccccc
Confidence 99999999999999887643
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=2.6e-12 Score=117.57 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=85.8
Q ss_pred hhhhhHHHHHHHHHHHHhc----CCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH
Q 010529 410 FRDKDFKTAIDYYSQFINV----NIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQK 485 (508)
Q Consensus 410 ~~~~~~~~A~~~~~~ai~~----~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~ 485 (508)
....+++.|+..+++++.. ++. .+.+|+++|.+|..+|++++|+.+|++||+++|+++.+|+++|.+|..+|+++
T Consensus 10 ~~~~~~e~al~~~~e~l~~~~~~~~~-~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~ 88 (259)
T d1xnfa_ 10 QPTLQQEVILARMEQILASRALTDDE-RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 88 (259)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred cccHHHHHHHHHHHHHHHhhhcCCHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHH
Confidence 3456778899999999875 334 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccc
Q 010529 486 DAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 486 ~A~~~~~~a~~~~p~~~~~~ 505 (508)
+|+.+|++|++++|.+...+
T Consensus 89 ~A~~~~~~al~~~p~~~~a~ 108 (259)
T d1xnfa_ 89 AAYEAFDSVLELDPTYNYAH 108 (259)
T ss_dssp HHHHHHHHHHHHCTTCTHHH
T ss_pred HhhhhhhHHHHHHhhhhhhH
Confidence 99999999999999987543
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=4.1e-11 Score=102.13 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=83.5
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+.+.|.++++.|+|++|+..++++|+++|. ++.+|+++|.||..+|++++|+.+|++|++++|++..+...++.+.
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345677999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHH
Q 010529 479 SKLDMQKDAAD 489 (508)
Q Consensus 479 ~~~~~~~~A~~ 489 (508)
..++++.+..+
T Consensus 141 ~~~~~~~~~e~ 151 (170)
T d1p5qa1 141 QRIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.23 E-value=3.6e-11 Score=102.47 Aligned_cols=90 Identities=19% Similarity=0.134 Sum_probs=84.3
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
.+..+.+.|.++++.|+|++|+..|++||+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+
T Consensus 76 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~ 154 (169)
T d1ihga1 76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 154 (169)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4566788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHH
Q 010529 478 LSKLDMQKDAA 488 (508)
Q Consensus 478 ~~~~~~~~~A~ 488 (508)
...+..+.++.
T Consensus 155 ~~~l~~~~~~~ 165 (169)
T d1ihga1 155 KQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98888777764
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.22 E-value=1.1e-10 Score=99.34 Aligned_cols=89 Identities=10% Similarity=0.092 Sum_probs=82.6
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+.-+.+.|.+++..|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.+|.++++++|++..++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHH
Q 010529 479 SKLDMQKDAA 488 (508)
Q Consensus 479 ~~~~~~~~A~ 488 (508)
..++++.+..
T Consensus 143 ~~~~~~~e~~ 152 (168)
T d1kt1a1 143 KKAKEHNERD 152 (168)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhHHHHH
Confidence 8888776543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=1.1e-10 Score=99.95 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=92.5
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh----------------------HHHhhHHHHHHhhCCHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP----------------------TVYARRSLCHLFSDRSDAALL 455 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------------~~~~~~a~~~~~~~~~~~A~~ 455 (508)
....+...|..+...|++++|++.|++|+++.+. +. .++.++|.++..+|++++|+.
T Consensus 10 ~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG-~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~ 88 (179)
T d2ff4a2 10 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 88 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 3556788999999999999999999999998765 32 578999999999999999999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH-------hcCccc
Q 010529 456 DAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEG-------AALEEK 500 (508)
Q Consensus 456 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a-------~~~~p~ 500 (508)
+++++++++|.+..+|.+++.+|..+|++++|++.|+++ +.++|.
T Consensus 89 ~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 89 ELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 999999999999999999999999999999999999998 556664
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=5.4e-11 Score=94.52 Aligned_cols=80 Identities=10% Similarity=0.016 Sum_probs=76.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|.++...|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++.+.
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l~ 115 (117)
T d1elwa_ 37 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 115 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHh
Confidence 567889999999999999999999999999999 9999999999999999999999999999999999999999998775
Q ss_pred H
Q 010529 479 S 479 (508)
Q Consensus 479 ~ 479 (508)
.
T Consensus 116 ~ 116 (117)
T d1elwa_ 116 A 116 (117)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=2.6e-11 Score=98.14 Aligned_cols=72 Identities=10% Similarity=-0.058 Sum_probs=68.1
Q ss_pred hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 434 PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 434 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+..+-++|.+++..|+|++|+.+|+++|+++|++..+|+++|.+|..+|+|++|+++|++|++++|.+...+
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 566789999999999999999999999999999999999999999999999999999999999999987653
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=1.5e-10 Score=97.32 Aligned_cols=93 Identities=15% Similarity=0.003 Sum_probs=84.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|.+++..|++++|+..|+++|+++|. +..+|.++|.+|..+|++++|+.+|+++++++|++..++..++.+.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~~ 122 (159)
T d1a17a_ 44 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 122 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 667899999999999999999999999999999 9999999999999999999999999999999999999998887764
Q ss_pred --HHcCCHHHHHHHHH
Q 010529 479 --SKLDMQKDAADMLL 492 (508)
Q Consensus 479 --~~~~~~~~A~~~~~ 492 (508)
...+.+++|+....
T Consensus 123 ~~~~~~~~~~a~~~~~ 138 (159)
T d1a17a_ 123 KIVKQKAFERAIAGDE 138 (159)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcH
Confidence 45566777776543
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.16 E-value=2.3e-10 Score=95.47 Aligned_cols=84 Identities=13% Similarity=0.136 Sum_probs=78.4
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
+.-+.+.|.+++..|+|++|++.|+++|+++|. +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445678999999999999999999999999999 9999999999999999999999999999999999999999999887
Q ss_pred HHcCC
Q 010529 479 SKLDM 483 (508)
Q Consensus 479 ~~~~~ 483 (508)
.++++
T Consensus 146 ~kl~~ 150 (153)
T d2fbna1 146 NKLKE 150 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76644
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.15 E-value=2.5e-11 Score=95.66 Aligned_cols=72 Identities=14% Similarity=-0.017 Sum_probs=67.8
Q ss_pred hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 434 PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 434 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
...++++|.++++.|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++|++++|.+...+
T Consensus 16 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 87 (112)
T d1hxia_ 16 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 87 (112)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccch
Confidence 355788999999999999999999999999999999999999999999999999999999999999987654
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=3.6e-11 Score=91.56 Aligned_cols=73 Identities=12% Similarity=-0.095 Sum_probs=66.7
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCC-------cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPD-------WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
.++-++++|.+++++|+|++|+..|++|+++.|. .+.+++++|.++..+|++++|++.|++||+++|++..++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 4567899999999999999999999999998654 378999999999999999999999999999999988654
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.13 E-value=5.7e-11 Score=103.93 Aligned_cols=73 Identities=10% Similarity=0.019 Sum_probs=69.4
Q ss_pred ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 433 SPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 433 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
++..+.+.|.+|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+..++
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~ 75 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHH
Confidence 4677889999999999999999999999999999999999999999999999999999999999999987654
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.01 E-value=8.5e-10 Score=90.96 Aligned_cols=89 Identities=11% Similarity=-0.028 Sum_probs=76.4
Q ss_pred HHHHHHhhhHHh----------hhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC-----------HHHHHHHH
Q 010529 399 MLEARKQGDTAF----------RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR-----------SDAALLDA 457 (508)
Q Consensus 399 ~~~~~~~g~~~~----------~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-----------~~~A~~~~ 457 (508)
+..+.+.|.++. ..+.+++|+..|++||+++|. ++.+|+++|.+|..+|+ |++|++.|
T Consensus 31 ~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~ 109 (145)
T d1zu2a1 31 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFF 109 (145)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhhhh
Confidence 556677777766 346678999999999999999 99999999999988764 79999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH
Q 010529 458 MQAQCAHPDWPTAFYMQSVALSKLDMQKDAA 488 (508)
Q Consensus 458 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~ 488 (508)
++|++++|++..++..++.+....+.|.++.
T Consensus 110 ~kal~l~P~~~~~~~~L~~~~ka~~~~~e~~ 140 (145)
T d1zu2a1 110 QQAVDEQPDNTHYLKSLEMTAKAPQLHAEAY 140 (145)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHTHHHHHHHHH
T ss_pred hcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987776666653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=1.5e-09 Score=86.34 Aligned_cols=82 Identities=9% Similarity=-0.027 Sum_probs=72.3
Q ss_pred HHHHHHhhhHHhh---hhhHHHHHHHHHHHHhcCCCcC--hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 010529 399 MLEARKQGDTAFR---DKDFKTAIDYYSQFINVNIMVS--PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYM 473 (508)
Q Consensus 399 ~~~~~~~g~~~~~---~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 473 (508)
...+++.|..+.. .+++++|+..|+++++.+|. + ..+|+++|.+|..+|++++|+++|+++|+++|++..|...
T Consensus 33 ~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l 111 (122)
T d1nzna_ 33 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 111 (122)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHH
Confidence 4566888888875 56888999999999999987 4 4589999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 010529 474 QSVALSKL 481 (508)
Q Consensus 474 ~g~~~~~~ 481 (508)
++.+..++
T Consensus 112 ~~~I~~~~ 119 (122)
T d1nzna_ 112 ERLIDKAM 119 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=6.3e-10 Score=111.71 Aligned_cols=104 Identities=7% Similarity=-0.074 Sum_probs=74.5
Q ss_pred HHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 010529 398 DMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVA 477 (508)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 477 (508)
....+.+.|..+...|+++.|+..|.+++..+|. .++.++|.++...|++++|+..|++|++++|+++.+|+++|.+
T Consensus 119 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~ 195 (497)
T d1ya0a1 119 CRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAIL 195 (497)
T ss_dssp ------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHH
T ss_pred hHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 3556778899999999999999999999988876 5788899999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+...|++.+|+.+|.+|+.++|....+
T Consensus 196 ~~~~~~~~~A~~~y~ral~~~~~~~~a 222 (497)
T d1ya0a1 196 ASSKGDHLTTIFYYCRSIAVKFPFPAA 222 (497)
T ss_dssp HHHTTCHHHHHHHHHHHHSSSBCCHHH
T ss_pred HHHcCCHHHHHHHHHHHHhCCCCCHHH
Confidence 999999999999999999999986554
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.88 E-value=4.4e-09 Score=99.61 Aligned_cols=104 Identities=9% Similarity=-0.103 Sum_probs=90.7
Q ss_pred HHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC--HHHHHHHHHHHHHhCCCcHHHHH-HHHHH
Q 010529 401 EARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR--SDAALLDAMQAQCAHPDWPTAFY-MQSVA 477 (508)
Q Consensus 401 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~~~p~~~~a~~-~~g~~ 477 (508)
.+...+......|.+++|+.+|+++++.+|. ++.+|+++|.++..+++ +++|+..++++++++|.+..+|+ ..|.+
T Consensus 75 ~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~ 153 (334)
T d1dcea1 75 HLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 153 (334)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHH
Confidence 3455566777888899999999999999999 99999999999888775 89999999999999999988864 67888
Q ss_pred HHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 478 LSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 478 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+...+++++|+..++++++++|.|..++
T Consensus 154 ~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 154 AQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp HHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred HHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999987654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.88 E-value=4.2e-09 Score=95.72 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=85.3
Q ss_pred hhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHH----------
Q 010529 405 QGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQ---------- 474 (508)
Q Consensus 405 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~---------- 474 (508)
++..++..|++++|+..|+++|+.+|. +..++.++|.+|...|++++|+..++++++++|++..++..+
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 355678899999999999999999999 999999999999999999999999999999999976654444
Q ss_pred -------------------------HHHHHHcCCHHHHHHHHHHHhcCcccccccc
Q 010529 475 -------------------------SVALSKLDMQKDAADMLLEGAALEEKRQRGA 505 (508)
Q Consensus 475 -------------------------g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 505 (508)
+.++...|++++|+..++++.++.|.....+
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~ 136 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLA 136 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 4444556888999999999888888865443
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.87 E-value=4.8e-09 Score=95.75 Aligned_cols=140 Identities=11% Similarity=-0.006 Sum_probs=99.3
Q ss_pred CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccC-CCCCCcceeeeeeeCCcceeeeecC
Q 010529 70 SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKL-RRKRLANLIGYCCAGDERLLVAEYM 148 (508)
Q Consensus 70 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~E~~ 148 (508)
..+++.+..+.++.+.||+....+ ..++||+...........+.+|...+..+ .+--+++++.++..++..++||+++
T Consensus 14 ~~~~~~~~~~G~s~~~v~rv~~~~-~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l 92 (263)
T d1j7la_ 14 EKYRCVKDTEGMSPAKVYKLVGEN-ENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA 92 (263)
T ss_dssp TTSEEEECSCCCSSSEEEEEECSS-CEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred hceEEEEcCCCCCCCcEEEEEeCC-CeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEec
Confidence 345666655555567899987544 45788888665544555788999998877 3555788999888888999999999
Q ss_pred CCCCHHHHhhccCCCCcChHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 010529 149 PNDTLAKHLFHWEKQTIEWPLRLRVAFYIAEALDYCNTEG---------------------------------------- 188 (508)
Q Consensus 149 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---------------------------------------- 188 (508)
+|.++.+... +......++.++++.|..||+..
T Consensus 93 ~G~~~~~~~~-------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T d1j7la_ 93 DGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SSEEHHHHTT-------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCS
T ss_pred cccccccccc-------ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccch
Confidence 9988866542 11122334555666666666421
Q ss_pred ------------------CceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 189 ------------------RPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 189 ------------------~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
.++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 16899999999999877666799998765
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.80 E-value=4e-09 Score=97.89 Aligned_cols=103 Identities=12% Similarity=-0.022 Sum_probs=87.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCC-----cChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc------
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIM-----VSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW------ 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 467 (508)
+..+...|+.+...|+|++|+++|.+|+++... ..+..|.++|.||..+|++++|++.|++++++.++.
T Consensus 37 a~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 116 (290)
T d1qqea_ 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRG 116 (290)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhH
Confidence 345667788999999999999999999987321 145789999999999999999999999999987655
Q ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHhcCcccc
Q 010529 468 PTAFYMQSVALSK-LDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 468 ~~a~~~~g~~~~~-~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..++.++|.+|.. +|++++|+..|++|+++.+..
T Consensus 117 ~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788999988865 799999999999999887654
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.75 E-value=2.1e-08 Score=94.80 Aligned_cols=89 Identities=13% Similarity=0.035 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCC----------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-
Q 010529 415 FKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDR----------SDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDM- 483 (508)
Q Consensus 415 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~- 483 (508)
.++|++.|+++|+++|. ++.+|++|+.++..+++ +++|+..++++++.+|++..+|+.+|.++..+++
T Consensus 45 ~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~~~~~~ 123 (334)
T d1dcea1 45 DESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP 123 (334)
T ss_dssp SHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSC
T ss_pred cHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHHHHhccc
Confidence 48999999999999999 99999999988776554 7999999999999999999999999999988875
Q ss_pred -HHHHHHHHHHHhcCccccccc
Q 010529 484 -QKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 484 -~~~A~~~~~~a~~~~p~~~~~ 504 (508)
+++|+..++++++++|++...
T Consensus 124 ~~~~a~~~~~~al~~~~~~~~~ 145 (334)
T d1dcea1 124 NWARELELCARFLEADERNFHC 145 (334)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHHhhCchhhhh
Confidence 899999999999999998654
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.70 E-value=2.1e-08 Score=92.79 Aligned_cols=104 Identities=8% Similarity=-0.197 Sum_probs=91.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC------hHHHhhHHHHHHh-hCCHHHHHHHHHHHHHhCCC-----
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS------PTVYARRSLCHLF-SDRSDAALLDAMQAQCAHPD----- 466 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~----- 466 (508)
+..+.+.|.++...|++++|++.|++++++.+. . ..++.++|.+|.. .|++++|++.|++|+++.+.
T Consensus 77 a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~ 155 (290)
T d1qqea_ 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (290)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhh-cccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 556788899999999999999999999998766 4 5788899988865 69999999999999988532
Q ss_pred -cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccccc
Q 010529 467 -WPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQR 503 (508)
Q Consensus 467 -~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 503 (508)
...++.++|.++..+|+|++|+..|++++++.+.+..
T Consensus 156 ~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~ 193 (290)
T d1qqea_ 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred hhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchh
Confidence 3567999999999999999999999999999888653
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.61 E-value=8.1e-08 Score=90.27 Aligned_cols=108 Identities=9% Similarity=-0.096 Sum_probs=92.3
Q ss_pred hHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcC-----hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCc
Q 010529 393 TQQMRDMLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVS-----PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDW 467 (508)
Q Consensus 393 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 467 (508)
.+....+.-...+|..++..|++++|+..|+++++..|. + ..++.++|.+|..+|++++|+..|++++++.+..
T Consensus 6 ~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~-~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~ 84 (366)
T d1hz4a_ 6 REDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPP-GWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH 84 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred cccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-CCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 333334555566799999999999999999999999998 5 3578999999999999999999999999886533
Q ss_pred ------HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 468 ------PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 468 ------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
..+++++|.++...|++..|+..+.+++++.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~ 124 (366)
T d1hz4a_ 85 DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124 (366)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 5678999999999999999999999999877654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.50 E-value=9.5e-08 Score=79.42 Aligned_cols=70 Identities=14% Similarity=0.022 Sum_probs=60.5
Q ss_pred hHHHhhH--HHHHHhhCCHHHHHHHHHHHHHhCCCc------------HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcc
Q 010529 434 PTVYARR--SLCHLFSDRSDAALLDAMQAQCAHPDW------------PTAFYMQSVALSKLDMQKDAADMLLEGAALEE 499 (508)
Q Consensus 434 ~~~~~~~--a~~~~~~~~~~~A~~~~~~al~~~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p 499 (508)
+.+|.++ |..++..|+|++|+..|++||+++|+. +.+|.++|.+|..+|+|++|+.++++|+++.|
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3445544 888899999999999999999999875 46899999999999999999999999999888
Q ss_pred cccc
Q 010529 500 KRQR 503 (508)
Q Consensus 500 ~~~~ 503 (508)
++..
T Consensus 87 ~~~~ 90 (156)
T d2hr2a1 87 RRGE 90 (156)
T ss_dssp HHCC
T ss_pred cccc
Confidence 6543
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.47 E-value=2.6e-07 Score=71.63 Aligned_cols=71 Identities=8% Similarity=-0.089 Sum_probs=43.5
Q ss_pred hHHHhhHHHHHHhhCC---HHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 434 PTVYARRSLCHLFSDR---SDAALLDAMQAQCAHPDW-PTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 434 ~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
....++.|.|+.+..+ .++||..++.+++.+|.. .+++|++|.+|+++|+|++|+++++++|+++|.|.-+
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA 109 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 109 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHH
Confidence 4555666666654433 356666666666666654 3566666666666666666666666666666666543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.45 E-value=2.9e-07 Score=83.07 Aligned_cols=69 Identities=17% Similarity=0.182 Sum_probs=52.9
Q ss_pred ccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCC--CCCCcceeeeeeeCCcceeeeecCCCCCHH
Q 010529 83 ANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR--RKRLANLIGYCCAGDERLLVAEYMPNDTLA 154 (508)
Q Consensus 83 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~lv~E~~~~~sL~ 154 (508)
-+.||+....++..++||...... ...+..|+..++.+. .-.++++++++.+++..++||++++|.++.
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred CCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence 367999998888888999865443 345788888888773 344678888888888899999999986653
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.41 E-value=3.8e-07 Score=90.95 Aligned_cols=83 Identities=16% Similarity=0.052 Sum_probs=78.3
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVAL 478 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 478 (508)
...+...|..+...++|++|+..|.+|++++|+ +..+|+++|.++...|++.+|+..|.+||.++|.++.|+.+++.++
T Consensus 152 ~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~ 230 (497)
T d1ya0a1 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 356788999999999999999999999999999 9999999999999999999999999999999999999999999988
Q ss_pred HHcC
Q 010529 479 SKLD 482 (508)
Q Consensus 479 ~~~~ 482 (508)
....
T Consensus 231 ~~~~ 234 (497)
T d1ya0a1 231 SKAL 234 (497)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7654
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.34 E-value=3.8e-07 Score=85.51 Aligned_cols=103 Identities=9% Similarity=0.020 Sum_probs=89.0
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCc---ChHHHhhHHHHHHhhCCHHHHHHHHHHHHHh------CCCcHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMV---SPTVYARRSLCHLFSDRSDAALLDAMQAQCA------HPDWPT 469 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~ 469 (508)
...+...|..+...|++++|...|.++++..+.. ....+.++|.+|..+|++++|+..+++++.+ .|....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 292 (366)
T d1hz4a_ 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNR 292 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHH
Confidence 3345667888899999999999999999887762 2456788999999999999999999999854 467788
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhcCcccc
Q 010529 470 AFYMQSVALSKLDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 470 a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~ 501 (508)
+|+.+|.+|..+|++++|++.|++|+++.+..
T Consensus 293 ~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 293 NLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999987653
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.28 E-value=1.6e-06 Score=66.98 Aligned_cols=69 Identities=6% Similarity=-0.137 Sum_probs=61.2
Q ss_pred hhhhHHHHHHHHHHHHhcCCCcC-hHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 010529 411 RDKDFKTAIDYYSQFINVNIMVS-PTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK 480 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~~p~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 480 (508)
...+.++++..++++++.+|. + .+.++++|.+|+++|+|++|++.++++|+++|++..|...+-.+...
T Consensus 50 ~~~d~~~gI~lLe~~~~~~p~-~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie~~ 119 (124)
T d2pqrb1 50 DVNDERLGVKILTDIYKEAES-RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDK 119 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Confidence 346789999999999999997 5 48999999999999999999999999999999999998776666544
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.22 E-value=8.3e-06 Score=75.44 Aligned_cols=99 Identities=13% Similarity=-0.005 Sum_probs=84.2
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHH-hhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHL-FSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKL 481 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 481 (508)
...+......|++++|.+.|.++++..|. ....|...|.... ..|+.+.|...|+++++..|+++..|...+..+...
T Consensus 138 ~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~~ 216 (308)
T d2onda1 138 IQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHL 216 (308)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHc
Confidence 34455566778899999999999999999 8888888887654 468899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCccccc
Q 010529 482 DMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~~~ 502 (508)
|+++.|...|++|++..|.+.
T Consensus 217 g~~~~aR~~fe~ai~~~~~~~ 237 (308)
T d2onda1 217 NEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp CCHHHHHHHHHHHHHSSSSCG
T ss_pred CChHHHHHHHHHHHHhCCCCh
Confidence 999999999999998776543
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.15 E-value=1.2e-06 Score=79.02 Aligned_cols=63 Identities=17% Similarity=-0.014 Sum_probs=59.0
Q ss_pred HHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCccccccc
Q 010529 442 LCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSKLDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 442 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.-.+..|++++|+..|+++++.+|+++.++..+|.+|...|++++|++.|+++++++|++..+
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~ 66 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 66 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHH
Confidence 445778999999999999999999999999999999999999999999999999999987654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.09 E-value=8.3e-06 Score=78.17 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=50.7
Q ss_pred cccCCCCcccEEEEEEEc-CCCEEEEEEecCC----C---CCChhHHHHHHHHhccC-CC--CCCcceeeeeeeCCccee
Q 010529 75 VSESGEKAANVVYKGRLE-NRQWIAVKKFTKV----A---WPDPTQFKEEAEGVGKL-RR--KRLANLIGYCCAGDERLL 143 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~---~~~~~~~~~E~~~l~~l-~h--~nIv~~~~~~~~~~~~~l 143 (508)
.+.||.|....||++... +++.|+||.-... . .-...+...|.+.|+.+ .+ ..+++++.+ +++..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 457899999999999954 4678999965321 1 11234566788888776 33 346667655 4556789
Q ss_pred eeecCCCCC
Q 010529 144 VAEYMPNDT 152 (508)
Q Consensus 144 v~E~~~~~s 152 (508)
|||++.+..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999997644
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.97 E-value=1.3e-05 Score=74.06 Aligned_cols=101 Identities=8% Similarity=0.001 Sum_probs=88.9
Q ss_pred HHhhhHHhhhhhHHHHHHHHHHHHhcCCCcCh-HHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-H
Q 010529 403 RKQGDTAFRDKDFKTAIDYYSQFINVNIMVSP-TVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALS-K 480 (508)
Q Consensus 403 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~-~ 480 (508)
...+......|+++.|...|+++|+..|. +. .+|...+......|++++|.+.|.+|++..|.....|...|.... .
T Consensus 103 ~~ya~~~~~~~~~~~a~~i~~~~l~~~~~-~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~~ 181 (308)
T d2onda1 103 FAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC 181 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 34455667789999999999999999998 64 579999999999999999999999999999999999999998754 5
Q ss_pred cCCHHHHHHHHHHHhcCccccccc
Q 010529 481 LDMQKDAADMLLEGAALEEKRQRG 504 (508)
Q Consensus 481 ~~~~~~A~~~~~~a~~~~p~~~~~ 504 (508)
.|+.+.|...|++|++..|.+...
T Consensus 182 ~~~~~~a~~i~e~~l~~~p~~~~~ 205 (308)
T d2onda1 182 SKDKSVAFKIFELGLKKYGDIPEY 205 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccCHHHHHHHHHHHHHhhhhhHHH
Confidence 689999999999999999987653
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.93 E-value=7.5e-05 Score=62.70 Aligned_cols=68 Identities=12% Similarity=0.062 Sum_probs=62.9
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHH-------HHhCCCc
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQA-------QCAHPDW 467 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-------l~~~p~~ 467 (508)
...+...+..+...|++++|+..++++++++|. +..+|.+++.+|..+|++.+|++.|+++ +.++|..
T Consensus 67 ~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 67 VLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 566788999999999999999999999999999 9999999999999999999999999998 4567764
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.88 E-value=5.6e-05 Score=67.79 Aligned_cols=98 Identities=11% Similarity=0.069 Sum_probs=85.1
Q ss_pred HHHHHHhhhHHhhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 010529 399 MLEARKQGDTAFRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTAFYMQ 474 (508)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~ 474 (508)
+.++...|..++..+||++|+..|++|.+. . +..+++++|.+|.. ..++..|+..+..+.... ++.+++.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhcc
Confidence 457889999999999999999999999876 4 78999999999998 779999999999877654 78889999
Q ss_pred HHHHHH----cCCHHHHHHHHHHHhcCcccc
Q 010529 475 SVALSK----LDMQKDAADMLLEGAALEEKR 501 (508)
Q Consensus 475 g~~~~~----~~~~~~A~~~~~~a~~~~p~~ 501 (508)
|..+.. ..+++.|...|+++.+..+..
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~ 107 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKYAE 107 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhhhh
Confidence 988875 578999999999999876543
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.86 E-value=0.00016 Score=57.33 Aligned_cols=86 Identities=9% Similarity=-0.078 Sum_probs=74.5
Q ss_pred hhhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----c
Q 010529 410 FRDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK----L 481 (508)
Q Consensus 410 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~ 481 (508)
....++++|+..|+++.+. . ++.+.+++|.+|.. ..++.+|++.|+++.+. .++.+.+++|.+|.. .
T Consensus 34 ~~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~ 108 (133)
T d1klxa_ 34 NSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVV 108 (133)
T ss_dssp CTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSC
T ss_pred ccccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccC
Confidence 3456899999999999886 4 78999999999987 67799999999999876 578999999999987 5
Q ss_pred CCHHHHHHHHHHHhcCccc
Q 010529 482 DMQKDAADMLLEGAALEEK 500 (508)
Q Consensus 482 ~~~~~A~~~~~~a~~~~p~ 500 (508)
.++++|+.+|++|.++...
T Consensus 109 ~d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 109 KNEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHCCCH
Confidence 7999999999999987654
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.48 E-value=0.00022 Score=63.69 Aligned_cols=98 Identities=14% Similarity=0.046 Sum_probs=79.8
Q ss_pred HHHHHhhhHHhh----hhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHh----hCCHHHHHHHHHHHHHhCCCcHHHH
Q 010529 400 LEARKQGDTAFR----DKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLF----SDRSDAALLDAMQAQCAHPDWPTAF 471 (508)
Q Consensus 400 ~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~ 471 (508)
..+...|..+.. ..+...+...++.+.+ .. ++.+++++|.+|.. .+++++|+..|.++.+. .++.|+
T Consensus 143 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~--~g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~ 217 (265)
T d1ouva_ 143 DGCTILGSLYDAGRGTPKDLKKALASYDKACD--LK-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGGGC 217 (265)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHHHH
T ss_pred chhhhhhhhhccCCCcccccccchhhhhcccc--cc-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHHHH
Confidence 344555666553 4577788888888875 45 78999999999998 77999999999999998 478999
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHhcCccccc
Q 010529 472 YMQSVALSK----LDMQKDAADMLLEGAALEEKRQ 502 (508)
Q Consensus 472 ~~~g~~~~~----~~~~~~A~~~~~~a~~~~p~~~ 502 (508)
+++|.+|.. ..++++|+++|++|.++..+..
T Consensus 218 ~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~A 252 (265)
T d1ouva_ 218 FNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 252 (265)
T ss_dssp HHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHHH
Confidence 999999986 4589999999999998876643
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.43 E-value=0.00044 Score=63.94 Aligned_cols=96 Identities=16% Similarity=0.058 Sum_probs=57.8
Q ss_pred CccccCHHHHHHHhcCC---CcccccccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCCC-
Q 010529 53 LFSEFSFLDLRAATNNF---SSDNIVSESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKRL- 128 (508)
Q Consensus 53 ~~~~~~~~~~~~~~~~~---~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI- 128 (508)
.+..++.+-+..+...+ .+..+. .|+ +.--.||++..++|..|++|+.+... -..+++..|+..+..|....|
T Consensus 4 ~f~~L~pd~i~~al~~~g~~~~~~~~-~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gip 80 (325)
T d1zyla1 4 TFQTLHPDTIMDALFEHGIRVDSGLT-PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVP 80 (325)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCE-EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCS
T ss_pred CccccCHHHHHHHHHHcCCCCCcCcc-ccc-cccceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCC
Confidence 34556666665444332 222221 232 22358999999999999999986543 245678899998888743222
Q ss_pred -cceee-----eeeeCCcceeeeecCCCC
Q 010529 129 -ANLIG-----YCCAGDERLLVAEYMPND 151 (508)
Q Consensus 129 -v~~~~-----~~~~~~~~~lv~E~~~~~ 151 (508)
+..+. .+...+..+.|++++.|.
T Consensus 81 v~~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 81 VAAPVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp BCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence 22211 123456678899998764
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.36 E-value=0.00048 Score=54.39 Aligned_cols=82 Identities=15% Similarity=0.037 Sum_probs=68.1
Q ss_pred hhhhHHHHHHHHHHHHhcCCCcChHHHhhHHHHHHhhCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHH
Q 010529 411 RDKDFKTAIDYYSQFINVNIMVSPTVYARRSLCHLFSDRSDAALLDAMQAQCAHPDWPTAFYMQSVALSK----LDMQKD 486 (508)
Q Consensus 411 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~ 486 (508)
..+|+++|+..|+++.+.+ ++.+.++++. ....++++|+..++++.+. +++.+.+++|..|.. ..++++
T Consensus 5 v~kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~ 77 (133)
T d1klxa_ 5 VKKDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRK 77 (133)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred cccCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHH
Confidence 3579999999999999875 4556666653 4567899999999999875 689999999999986 578999
Q ss_pred HHHHHHHHhcCcc
Q 010529 487 AADMLLEGAALEE 499 (508)
Q Consensus 487 A~~~~~~a~~~~p 499 (508)
|+++|++|.+...
T Consensus 78 A~~~~~~aa~~g~ 90 (133)
T d1klxa_ 78 AAQYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHhhhhccCc
Confidence 9999999987653
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.21 E-value=0.00066 Score=64.57 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=50.9
Q ss_pred cccCCCCcccEEEEEEEcC--------CCEEEEEEecCCCCCChhHHHHHHHHhccCC-CCCCcceeeeeeeCCcceeee
Q 010529 75 VSESGEKAANVVYKGRLEN--------RQWIAVKKFTKVAWPDPTQFKEEAEGVGKLR-RKRLANLIGYCCAGDERLLVA 145 (508)
Q Consensus 75 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~ 145 (508)
++.|+.|-.-.+|++...+ ...|.+++.. . ....-...+|..+++.+. +.-.+++++++.+ .+||
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 5678889999999998654 2456677664 2 233445678999998884 4335678887743 5899
Q ss_pred ecCCCCCH
Q 010529 146 EYMPNDTL 153 (508)
Q Consensus 146 E~~~~~sL 153 (508)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.13 E-value=0.00057 Score=62.83 Aligned_cols=158 Identities=13% Similarity=-0.002 Sum_probs=85.3
Q ss_pred ccCHHHHHHHhcCCCccccc--ccCCCCcccEEEEEEEcCCCEEEEEEecCCCCCChhHHHHHHHHhccCCCCC--Ccce
Q 010529 56 EFSFLDLRAATNNFSSDNIV--SESGEKAANVVYKGRLENRQWIAVKKFTKVAWPDPTQFKEEAEGVGKLRRKR--LANL 131 (508)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~--~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~~ 131 (508)
.++..++......|+-..+. ..|..|---+.|++...+|+ +++|+..... ..+.+..|+.++..|...+ ++..
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p 78 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 78 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence 35677888887777543333 33556766889999987777 8999886432 3345666777777773222 2222
Q ss_pred eee------eeeCCcceeeeecCCCCCHHH-----------Hh---hcc----C-C--------------------CCcC
Q 010529 132 IGY------CCAGDERLLVAEYMPNDTLAK-----------HL---FHW----E-K--------------------QTIE 166 (508)
Q Consensus 132 ~~~------~~~~~~~~lv~E~~~~~sL~~-----------~l---~~~----~-~--------------------~~l~ 166 (508)
+.. ....+....++.++.|..... .+ +.. . . ....
T Consensus 79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T d2ppqa1 79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 158 (316)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence 211 112344556666665532210 00 000 0 0 0011
Q ss_pred hHHHHHHHHHHHHHHHHHHh----CCCceeecCCCcceeeCCCCCeEEcccCCcc
Q 010529 167 WPLRLRVAFYIAEALDYCNT----EGRPLYHDLNAYRVLFDEDGDPRLSCFGLMK 217 (508)
Q Consensus 167 ~~~~~~i~~~i~~~L~~lH~----~~~iiH~Dikp~Nill~~~~~~kl~Dfg~a~ 217 (508)
.......+..+...+.-.+. .| +||+|+.+.||+++.+...-|.||+.+.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 159 EKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred chhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEecccccc
Confidence 11122222233333333332 24 8999999999999988777899999765
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.15 E-value=0.47 Score=33.65 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=11.7
Q ss_pred HHHHHhhhHHhhhhhHHHHHHHHHHHH
Q 010529 400 LEARKQGDTAFRDKDFKTAIDYYSQFI 426 (508)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~A~~~~~~ai 426 (508)
..+..++..+-..|+|++|+.+|.+||
T Consensus 16 ~~l~~~Av~~D~~g~y~eA~~~Y~~ai 42 (93)
T d1wfda_ 16 VAVLKRAVELDAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 333444444444444444444444443
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.35 E-value=0.64 Score=31.41 Aligned_cols=22 Identities=9% Similarity=-0.037 Sum_probs=10.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHH
Q 010529 473 MQSVALSKLDMQKDAADMLLEG 494 (508)
Q Consensus 473 ~~g~~~~~~~~~~~A~~~~~~a 494 (508)
++|..+...|+|+|||+++++|
T Consensus 13 RrAer~l~~~rydeAIech~kA 34 (83)
T d2crba1 13 RRADRLLAAGKYEEAISCHRKA 34 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 3444444455555555544443
|