Citrus Sinensis ID: 010566

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------
MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVWEQL
cccccEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHccccEEEEccccHHHHHHccccccccccEEEEcccccHHHHHHHHHcccEEEEHHHHHHHHHHccccccccccccEEEEEEccccccccccEEcccHHHHHHHHHHHHHHHHcccccccccEEEEEcHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHccccEEEEccHHHHccccccccccccccccccccccccEEEEEEEcccccccccccccccEEEEcccccccccccccHHHccccccccEEEcccccccc
ccccEEEEEEEccccccccccccccEEEccccccccccccccccHHHHHHHHHHHHccccccccEEEEcccccccEEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHccEEEEcccccccHHHEEEEEEcccEEEEEEccHHHHHHHHHcccccccEEEEEEEccccHHHHHHHHHcccEEEEHHHHHHHcccccccccccccccEEEEEEEcccccccccEEEccHHHHHHHHHHHHHHHHccccccHccEEEEHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHHccEEEEccccccccccEEEEccccccccccccccccccEEEEEEcccccccccccccccEEEEEcccEEEcccccHHHHHHHHHcccEcccccccccc
MSNMKYVVEVEKakeasggrpsigpvyrslfakdgfpapipgmesCWDVFRMAVErnpnnrmlgqreivdgkagkYVWKTYKEVYDLVIKVVNAIRTcgveergkcgiygvncpeWIIGMEACnalglhcvplydtlgaGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSfskvkpeqREEIEKYGLAVYSWDeflqlgenkqfdlpvkkkndICTImytsgttgdpkgvmvsNENIVTFIAGVKCLLESVNekltsedvyvsylplahIFDRAIEEVFIsngaaigfWRGDVKLLLEDigelkptifcaVPRVLDRIYSGLnqkissggllkKTLFNIAYSYKfhnlkkghkhveaspiadkiVFDKVkqsfggrvrlilsgaapltphVETFLRVVACAHVLqgygltetcagtfvslpnemsmigtvgppvpnvdvclesvpemeydalsstprgevcvkgstvfsgyykredltkeVMVDGWFHTGMGVWEQL
MSNMKYVVEVekakeasggrpsiGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERnpnnrmlgqreivdgkagkyVWKTYKEVYDLVIKVVNAIRtcgveergkcgiYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLktfpkttehlktivsfskvkpeqrEEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYtsgttgdpkgvMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNqkissggllKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEydalsstprgevcvkGSTVfsgyykredltKEVMVDGWFHTGMGVWEQL
MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVWEQL
***********************GPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVK***REEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVW***
****KYV******************VYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQL*************NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVWEQL
MSNMKYVVEVE********RPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVWEQL
***MKYVVEVEKAKEASG***SIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVWE*L
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MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGMGVWEQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query507 2.2.26 [Sep-21-2011]
Q9T0A0 666 Long chain acyl-CoA synth yes no 0.988 0.752 0.735 0.0
Q9T009 666 Long chain acyl-CoA synth no no 0.994 0.756 0.706 0.0
Q9C7W4 665 Long chain acyl-CoA synth no no 0.996 0.759 0.682 0.0
Q9XIA9 665 Long chain acyl-CoA synth no no 0.986 0.751 0.501 1e-155
O22898 660 Long chain acyl-CoA synth no no 0.976 0.75 0.478 1e-144
Q8LKS5 700 Long chain acyl-CoA synth no no 0.895 0.648 0.387 5e-87
Q55DR6 667 Fatty acyl-CoA synthetase yes no 0.877 0.667 0.389 3e-84
Q8LPS1 701 Long chain acyl-CoA synth no no 0.895 0.647 0.394 8e-84
Q1ZXQ4 673 Fatty acyl-CoA synthetase no no 0.897 0.676 0.347 2e-77
O88813 683 Long-chain-fatty-acid--Co yes no 0.883 0.655 0.367 3e-73
>sp|Q9T0A0|LACS4_ARATH Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1 Back     alignment and function desciption
 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/502 (73%), Positives = 435/502 (86%), Gaps = 1/502 (0%)

Query: 5   KYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLG 64
           KY+ +VE+ KE S GRPS+GPVYRS+FAKDGFP PI GM+SCWDVFRM+VE+ PNN MLG
Sbjct: 6   KYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPNNPMLG 65

Query: 65  QREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACN 124
           +REIVDGK GKYVW+TY+EVYD+V+K+ N++R+ GV++  KCGIYG N PEWII MEACN
Sbjct: 66  RREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACN 125

Query: 125 ALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184
           A GL+CVPLYDTLGA AVEFII HS VSI FVEEKKI E+ KT P +TE++KT+VSF  V
Sbjct: 126 AHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGV 185

Query: 185 KPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSN 244
             EQ+EE E +GL +Y+WDEFL+LGE KQ+DLP+KKK+DICTIMYTSGTTGDPKGVM+SN
Sbjct: 186 SREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISN 245

Query: 245 ENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVK 304
           E+IVT IAGV  LL+S NE LT +DVY+SYLPLAHIFDR IEE FI +GAAIGFWRGDVK
Sbjct: 246 ESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVK 305

Query: 305 LLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKH 364
           LL+ED+ ELKPTIFCAVPRVLDR+YSGL +K+S GG LKK +F+ A+SYKF  +KKG  H
Sbjct: 306 LLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMKKGQSH 365

Query: 365 VEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCA 424
           VEASP+ DK+VF KVKQ  GG VR+ILSGAAPL  HVE+FLRVVAC HVLQGYGLTE+CA
Sbjct: 366 VEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCA 425

Query: 425 GTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKR 484
           GTFVSLP+E+ M+GTVGPPVPNVD+ LESVPEMEYDAL+ST RGE+C++G T+FSGYYKR
Sbjct: 426 GTFVSLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFSGYYKR 485

Query: 485 EDLTKEVMVDGWFHTG-MGVWE 505
           EDLTKEV++DGW HTG +G W+
Sbjct: 486 EDLTKEVLIDGWLHTGDVGEWQ 507
Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses palmitate, palmitoleate, oleate and linoleate.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 3
>sp|Q9T009|LACS5_ARATH Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana GN=LACS5 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7W4|LACS3_ARATH Long chain acyl-CoA synthetase 3 OS=Arabidopsis thaliana GN=LACS3 PE=2 SV=1 Back     alignment and function description
>sp|Q9XIA9|LACS2_ARATH Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana GN=LACS2 PE=2 SV=1 Back     alignment and function description
>sp|O22898|LACS1_ARATH Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana GN=LACS1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LKS5|LACS7_ARATH Long chain acyl-CoA synthetase 7, peroxisomal OS=Arabidopsis thaliana GN=LACS7 PE=1 SV=2 Back     alignment and function description
>sp|Q55DR6|FCSA_DICDI Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1 Back     alignment and function description
>sp|Q8LPS1|LACS6_ARATH Long chain acyl-CoA synthetase 6, peroxisomal OS=Arabidopsis thaliana GN=LACS6 PE=1 SV=1 Back     alignment and function description
>sp|Q1ZXQ4|FCSB_DICDI Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1 Back     alignment and function description
>sp|O88813|ACSL5_RAT Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
170676820 665 long-chain acyl-CoA synthetase 4 [Ricinu 0.988 0.753 0.794 0.0
225426350 662 PREDICTED: long chain acyl-CoA synthetas 0.996 0.762 0.794 0.0
83320523 656 ACS1 [Ricinus communis] 0.982 0.759 0.795 0.0
224075096 662 predicted protein [Populus trichocarpa] 0.996 0.762 0.784 0.0
147810382 654 hypothetical protein VITISV_035299 [Viti 0.978 0.758 0.806 0.0
74147576 662 ACS-like protein [Gossypium hirsutum] 0.996 0.762 0.778 0.0
224053783 662 predicted protein [Populus trichocarpa] 0.996 0.762 0.778 0.0
356497309 662 PREDICTED: long chain acyl-CoA synthetas 0.996 0.762 0.768 0.0
74147588 663 ACS-like protein [Gossypium hirsutum] 0.986 0.754 0.760 0.0
449464058 660 PREDICTED: long chain acyl-CoA synthetas 0.998 0.766 0.759 0.0
>gi|170676820|gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis] Back     alignment and taxonomy information
 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/502 (79%), Positives = 454/502 (90%), Gaps = 1/502 (0%)

Query: 5   KYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLG 64
           KY++EVEKAKEA  G+PS+GPVYRSLFAKDGFP PIPG++SCWDVFRM+VE+ PNN MLG
Sbjct: 8   KYLIEVEKAKEAKDGKPSVGPVYRSLFAKDGFPPPIPGLDSCWDVFRMSVEKYPNNPMLG 67

Query: 65  QREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACN 124
            RE V+GKAGKYVW+TYK+VYDLVIKV NAIR+CGVE   KCGIYG N  EWI+ MEACN
Sbjct: 68  HREFVNGKAGKYVWQTYKQVYDLVIKVGNAIRSCGVEPGEKCGIYGANSAEWIMSMEACN 127

Query: 125 ALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184
           A GL+CVPLYDTLGAGAVE+IICH+ VSIAFVEEKKIPE+LKTFP   +++KTIVSF  +
Sbjct: 128 AHGLYCVPLYDTLGAGAVEYIICHAEVSIAFVEEKKIPELLKTFPSAAQYIKTIVSFGNI 187

Query: 185 KPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSN 244
             EQREE+EK+GL  YSW++FL+LGENKQ+DLP KKK+DICTIMYTSGTTGDPKGVM+SN
Sbjct: 188 AREQREEMEKFGLVAYSWEDFLKLGENKQYDLPEKKKSDICTIMYTSGTTGDPKGVMISN 247

Query: 245 ENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVK 304
           ++IVT IAGV+ LLESVNE+LTSEDVY+SYLPLAHIFDR IEE+FIS+GA+IGFWRGDVK
Sbjct: 248 DSIVTIIAGVRRLLESVNEQLTSEDVYLSYLPLAHIFDRVIEELFISHGASIGFWRGDVK 307

Query: 305 LLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKH 364
           LL+EDIGELKPTIFCAVPRVLDRI+SGL QKISSGG LK  LFN+AYSYK   +KKG  H
Sbjct: 308 LLIEDIGELKPTIFCAVPRVLDRIHSGLTQKISSGGFLKNKLFNLAYSYKLSCMKKGLAH 367

Query: 365 VEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCA 424
            EASP++DK+VFDKVKQ  GG+VRLILSGAAPL  HVE FLRVV+CAHVLQGYGLTETCA
Sbjct: 368 DEASPLSDKLVFDKVKQGLGGKVRLILSGAAPLAIHVEAFLRVVSCAHVLQGYGLTETCA 427

Query: 425 GTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKR 484
           GTFVSLPNEM+M+GTVGPPVPNVDVCLESVPEM YDALSSTPRGE+CV+GSTVF+GYYKR
Sbjct: 428 GTFVSLPNEMAMLGTVGPPVPNVDVCLESVPEMNYDALSSTPRGEICVRGSTVFAGYYKR 487

Query: 485 EDLTKEVMVDGWFHTG-MGVWE 505
           EDLTKEV++DGWFHTG +G W+
Sbjct: 488 EDLTKEVLIDGWFHTGDIGEWQ 509

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426350|ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 [Vitis vinifera] gi|297742330|emb|CBI34479.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|83320523|gb|ABC02880.1| ACS1 [Ricinus communis] Back     alignment and taxonomy information
>gi|224075096|ref|XP_002304555.1| predicted protein [Populus trichocarpa] gi|222841987|gb|EEE79534.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147810382|emb|CAN67631.1| hypothetical protein VITISV_035299 [Vitis vinifera] Back     alignment and taxonomy information
>gi|74147576|gb|ABA00144.1| ACS-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224053783|ref|XP_002297977.1| predicted protein [Populus trichocarpa] gi|222845235|gb|EEE82782.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497309|ref|XP_003517503.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|74147588|gb|ABA00145.1| ACS-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|449464058|ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus] gi|449505070|ref|XP_004162367.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
TAIR|locus:2138141 666 LACS4 "long-chain acyl-CoA syn 0.988 0.752 0.735 5.7e-210
TAIR|locus:2136148 666 AT4G11030 [Arabidopsis thalian 0.994 0.756 0.706 5.2e-207
TAIR|locus:2014265 665 LACS3 "long-chain acyl-CoA syn 0.996 0.759 0.682 1.2e-198
TAIR|locus:2010177 665 LACS2 "long-chain acyl-CoA syn 0.984 0.750 0.502 1.4e-142
TAIR|locus:2065195 660 LACS1 "AT2G47240" [Arabidopsis 0.978 0.751 0.482 6.9e-134
TAIR|locus:2143661 700 LACS7 "AT5G27600" [Arabidopsis 0.893 0.647 0.391 5e-83
TAIR|locus:2083013 701 LACS6 "AT3G05970" [Arabidopsis 0.893 0.646 0.397 7.4e-82
DICTYBASE|DDB_G0269242 667 fcsA "long-chain-fatty-acid-Co 0.877 0.667 0.390 2e-81
DICTYBASE|DDB_G0269474 673 fcsB "fatty acyl-CoA synthetas 0.891 0.671 0.348 3.9e-76
UNIPROTKB|E2R463 698 ACSL5 "Uncharacterized protein 0.881 0.640 0.377 2.1e-75
TAIR|locus:2138141 LACS4 "long-chain acyl-CoA synthetase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2030 (719.7 bits), Expect = 5.7e-210, P = 5.7e-210
 Identities = 369/502 (73%), Positives = 435/502 (86%)

Query:     5 KYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLG 64
             KY+ +VE+ KE S GRPS+GPVYRS+FAKDGFP PI GM+SCWDVFRM+VE+ PNN MLG
Sbjct:     6 KYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPNNPMLG 65

Query:    65 QREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACN 124
             +REIVDGK GKYVW+TY+EVYD+V+K+ N++R+ GV++  KCGIYG N PEWII MEACN
Sbjct:    66 RREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACN 125

Query:   125 ALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184
             A GL+CVPLYDTLGA AVEFII HS VSI FVEEKKI E+ KT P +TE++KT+VSF  V
Sbjct:   126 AHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGV 185

Query:   185 KPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSN 244
               EQ+EE E +GL +Y+WDEFL+LGE KQ+DLP+KKK+DICTIMYTSGTTGDPKGVM+SN
Sbjct:   186 SREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISN 245

Query:   245 ENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVK 304
             E+IVT IAGV  LL+S NE LT +DVY+SYLPLAHIFDR IEE FI +GAAIGFWRGDVK
Sbjct:   246 ESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVK 305

Query:   305 LLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKH 364
             LL+ED+ ELKPTIFCAVPRVLDR+YSGL +K+S GG LKK +F+ A+SYKF  +KKG  H
Sbjct:   306 LLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMKKGQSH 365

Query:   365 VEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCA 424
             VEASP+ DK+VF KVKQ  GG VR+ILSGAAPL  HVE+FLRVVAC HVLQGYGLTE+CA
Sbjct:   366 VEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCA 425

Query:   425 GTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKR 484
             GTFVSLP+E+ M+GTVGPPVPNVD+ LESVPEMEYDAL+ST RGE+C++G T+FSGYYKR
Sbjct:   426 GTFVSLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFSGYYKR 485

Query:   485 EDLTKEVMVDGWFHTG-MGVWE 505
             EDLTKEV++DGW HTG +G W+
Sbjct:   486 EDLTKEVLIDGWLHTGDVGEWQ 507
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0001676 "long-chain fatty acid metabolic process" evidence=RCA;IDA
GO:0004467 "long-chain fatty acid-CoA ligase activity" evidence=IDA
GO:0006631 "fatty acid metabolic process" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0002213 "defense response to insect" evidence=RCA
GO:0006633 "fatty acid biosynthetic process" evidence=RCA;TAS
GO:0009611 "response to wounding" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
TAIR|locus:2136148 AT4G11030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014265 LACS3 "long-chain acyl-CoA synthetase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010177 LACS2 "long-chain acyl-CoA synthetase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065195 LACS1 "AT2G47240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143661 LACS7 "AT5G27600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083013 LACS6 "AT3G05970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269242 fcsA "long-chain-fatty-acid-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269474 fcsB "fatty acyl-CoA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E2R463 ACSL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9T0A0LACS4_ARATH6, ., 2, ., 1, ., 30.73500.98810.7522yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.963
3rd Layer6.2.1.30.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00006758001
SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (662 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00038876001
SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (448 aa)
     •  0.903
GSVIVG00018681001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (691 aa)
     •  0.901
GSVIVG00033040001
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (428 aa)
     •  0.899
GSVIVG00009919001
SubName- Full=Chromosome undetermined scaffold_1671, whole genome shotgun sequence; Flags- Frag [...] (148 aa)
     •  0.899
GSVIVG00009515001
SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (398 aa)
     •  0.899
GSVIVG00025319001
SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (830 aa)
     •  0.800
GSVIVG00019100001
SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (338 aa)
     •  0.800
GSVIVG00009528001
SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (256 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
PLN02614 666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 0.0
PLN02861 660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 0.0
PLN02430 660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 0.0
cd05927 539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 0.0
PLN02736 651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 1e-136
COG1022 613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-105
PLN02387 696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 2e-83
cd05907 456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 2e-81
PTZ00216 700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 7e-75
cd05932 504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 2e-71
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 3e-69
cd05933 594 cd05933, ACSBG_like, Bubblegum-like very long-chai 5e-64
COG0318 534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 2e-54
PRK06187 521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 3e-49
cd05936 468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 4e-46
PTZ00342 746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 2e-42
PRK07656 513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 2e-36
cd04433 338 cd04433, AFD_class_I, Adenylate forming domain, Cl 4e-32
cd05904 504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 3e-31
cd05929 342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-29
cd05917 347 cd05917, FACL_like_2, Uncharacterized subfamily of 2e-29
cd12118 520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 8e-29
PRK05605 573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 3e-28
cd12119 517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 1e-27
cd05912 407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 1e-26
TIGR01923 436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 7e-26
cd05941 430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 8e-26
cd05909 489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 8e-25
PRK06710 563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 3e-24
cd05926 345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 6e-24
COG0365 528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 1e-23
PRK06839 496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 1e-23
cd05903 437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 2e-22
PRK08751 560 PRK08751, PRK08751, putative long-chain fatty acyl 9e-22
PRK08974 560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 9e-22
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 2e-21
cd05911 487 cd05911, Firefly_Luc_like, Firefly luciferase of l 2e-20
PRK05677 562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 2e-20
cd05930 445 cd05930, A_NRPS, The adenylation domain of nonribo 5e-19
cd05959 506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 5e-19
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 4e-18
PRK07059 557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 1e-17
cd05921 559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 1e-17
PLN02246 537 PLN02246, PLN02246, 4-coumarate--CoA ligase 2e-17
cd05918 447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 3e-17
PLN02574 560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 6e-17
PRK08633 1146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 1e-16
cd05945 447 cd05945, DltA, D-alanine:D-alanyl carrier protein 2e-16
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 2e-16
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 2e-15
PRK12492 562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 2e-15
cd12117 474 cd12117, A_NRPS_Srf_like, The adenylation domain o 6e-15
PRK06145 497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 8e-15
PRK03640 483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 1e-14
cd05944 359 cd05944, FACL_like_4, Uncharacterized subfamily of 6e-14
cd05919 436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 6e-14
PRK08180 614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 9e-14
PLN02330 546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 2e-13
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 2e-13
cd05906 560 cd05906, A_NRPS_TubE_like, The adenylation domain 4e-13
cd05914 448 cd05914, FACL_like_3, Uncharacterized subfamily of 6e-13
PRK07787 471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 5e-12
cd05935 430 cd05935, LC_FACS_like, Putative long-chain fatty a 6e-12
PRK08162 545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 6e-12
cd05922 350 cd05922, FACL_like_6, Uncharacterized subfamily of 1e-11
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 2e-11
cd05920 483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 2e-11
TIGR03205 541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 4e-11
PRK07514 504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 4e-11
cd05972 430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 1e-10
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-10
cd05970 537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 1e-10
cd05934 421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 2e-10
PRK07529 632 PRK07529, PRK07529, AMP-binding domain protein; Va 2e-10
cd05931 547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 3e-10
PRK07867 529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 3e-10
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 6e-10
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 2e-09
cd05908 499 cd05908, A_NRPS_MycA_like, The adenylation domain 2e-09
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 2e-09
PRK05852 534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 2e-09
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 3e-09
cd05940 444 cd05940, FATP_FACS, Fatty acid transport proteins 7e-09
PRK08315 559 PRK08315, PRK08315, AMP-binding domain protein; Va 2e-08
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 4e-08
PLN02860 563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 4e-08
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 4e-08
cd05973 440 cd05973, MACS_like_2, Uncharacterized subfamily of 4e-08
PRK06178 567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 5e-08
PRK09088 488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 5e-08
PRK12582 624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 6e-08
PRK12583 558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 8e-08
PRK13295 547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 8e-08
PRK06188 524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 8e-08
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-07
PRK07470 528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 2e-07
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 2e-07
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 3e-07
PRK07008 539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 4e-07
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 5e-07
PRK06334 539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 5e-07
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 6e-07
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 6e-07
cd05908 499 cd05908, A_NRPS_MycA_like, The adenylation domain 1e-06
PRK05620 576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 1e-06
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 1e-06
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 3e-06
PRK07786 542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 3e-06
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 3e-06
cd05906 560 cd05906, A_NRPS_TubE_like, The adenylation domain 4e-06
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-06
PRK09274 552 PRK09274, PRK09274, peptide synthase; Provisional 4e-06
PRK08314 546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 8e-06
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 8e-06
PRK06814 1140 PRK06814, PRK06814, acylglycerophosphoethanolamine 8e-06
TIGR03208 538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 9e-06
PRK09029 458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 1e-05
PLN02479 567 PLN02479, PLN02479, acetate-CoA ligase 1e-05
PRK06087 547 PRK06087, PRK06087, short chain acyl-CoA synthetas 2e-05
cd05958 487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 2e-05
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-05
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 3e-05
PRK08008 517 PRK08008, caiC, putative crotonobetaine/carnitine- 3e-05
PRK05857 540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 3e-05
PRK09192 579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 4e-05
PRK06178 567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 5e-05
TIGR02188 625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 6e-05
PRK08316 523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 8e-05
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 8e-05
cd05910 455 cd05910, FACL_like_1, Uncharacterized subfamily of 8e-05
PRK13388 540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 8e-05
PTZ00297 1452 PTZ00297, PTZ00297, pantothenate kinase; Provision 9e-05
PRK07768 545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 1e-04
cd05971 439 cd05971, MACS_like_3, Uncharacterized subfamily of 1e-04
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 2e-04
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 2e-04
cd12116 438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 4e-04
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 6e-04
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 7e-04
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 7e-04
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 8e-04
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 9e-04
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 0.001
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 0.001
PRK09192 579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 0.001
PRK05850 578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 0.001
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 0.002
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 0.002
PLN03102 579 PLN03102, PLN03102, acyl-activating enzyme; Provis 0.002
cd05969 443 cd05969, MACS_like_4, Uncharacterized subfamily of 0.002
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 0.002
cd05967 607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 0.002
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 0.003
cd05974 433 cd05974, MACS_like_1, Uncharacterized subfamily of 0.003
PRK08279 600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 0.003
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 0.004
cd05937 468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 0.004
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 0.004
PRK08043 718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 0.004
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 0.004
cd05915 509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 0.004
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information 
 Score =  854 bits (2207), Expect = 0.0
 Identities = 372/505 (73%), Positives = 439/505 (86%), Gaps = 1/505 (0%)

Query: 2   SNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNR 61
              K++ +VE+ KE S GRPS+GPVYRS+FAKDGFP PI GM+SCWDVFRM+VE+ PNN 
Sbjct: 3   QQKKFIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNP 62

Query: 62  MLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGME 121
           MLG+REIVDGK GKYVW+TY+EVYD+VIK+ N++R+ GV++  KCGIYG N PEWII ME
Sbjct: 63  MLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISME 122

Query: 122 ACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSF 181
           ACNA GL+CVPLYDTLGAGAVEFII HS VSI FVEEKKI E+ KT P +TE++KT+VSF
Sbjct: 123 ACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSF 182

Query: 182 SKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVM 241
             V  EQ+EE E +GL +Y+WDEFL+LGE KQ+DLP+KKK+DICTIMYTSGTTGDPKGVM
Sbjct: 183 GGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVM 242

Query: 242 VSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRG 301
           +SNE+IVT IAGV  LL+S N  LT +DVY+SYLPLAHIFDR IEE FI +GAAIGFWRG
Sbjct: 243 ISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRG 302

Query: 302 DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKG 361
           DVKLL+ED+GELKPTIFCAVPRVLDR+YSGL +K+S GG LKK +F+ A+SYKF N+KKG
Sbjct: 303 DVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKG 362

Query: 362 HKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTE 421
             HVEASP+ DK+VF+KVKQ  GG VR+ILSGAAPL  HVE+FLRVVAC HVLQGYGLTE
Sbjct: 363 QSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTE 422

Query: 422 TCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGY 481
           +CAGTFVSLP+E+ M+GTVGPPVPNVD+ LESVPEMEYDAL+STPRGE+C++G T+FSGY
Sbjct: 423 SCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGY 482

Query: 482 YKREDLTKEVMVDGWFHTG-MGVWE 505
           YKREDLTKEV++DGW HTG +G W+
Sbjct: 483 YKREDLTKEVLIDGWLHTGDVGEWQ 507

Length = 666
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 507
KOG1256 691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PLN02614 666 long-chain acyl-CoA synthetase 100.0
PLN02861 660 long-chain-fatty-acid-CoA ligase 100.0
PLN02430 660 long-chain-fatty-acid-CoA ligase 100.0
PTZ00342 746 acyl-CoA synthetase; Provisional 100.0
PLN02736 651 long-chain acyl-CoA synthetase 100.0
KOG1180 678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
COG1022 613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PLN02387 696 long-chain-fatty-acid-CoA ligase family protein 100.0
PTZ00216 700 acyl-CoA synthetase; Provisional 100.0
KOG1177 596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
KOG1176 537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
COG0318 534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
COG0365 528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PTZ00237 647 acetyl-CoA synthetase; Provisional 100.0
PLN02860 563 o-succinylbenzoate-CoA ligase 100.0
PRK12582 624 acyl-CoA synthetase; Provisional 100.0
PRK08180 614 feruloyl-CoA synthase; Reviewed 100.0
PLN02654 666 acetate-CoA ligase 100.0
PRK06334 539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PRK07529 632 AMP-binding domain protein; Validated 100.0
PRK07788 549 acyl-CoA synthetase; Validated 100.0
TIGR02188 625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK13295 547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
TIGR02316 628 propion_prpE propionate--CoA ligase. This family c 100.0
PRK04319 570 acetyl-CoA synthetase; Provisional 100.0
COG1021 542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK00174 637 acetyl-CoA synthetase; Provisional 100.0
PLN02574 560 4-coumarate--CoA ligase-like 100.0
PRK07656 513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640 483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK09274 552 peptide synthase; Provisional 100.0
PLN02246 537 4-coumarate--CoA ligase 100.0
PRK05857 540 acyl-CoA synthetase; Validated 100.0
PRK05677 562 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03208 538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK13382 537 acyl-CoA synthetase; Provisional 100.0
PRK06187 521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08314 546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05605 573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08008 517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK06155 542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK10524 629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK05852 534 acyl-CoA synthetase; Validated 100.0
TIGR02275 527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PLN02330 546 4-coumarate--CoA ligase-like 1 100.0
PRK06839 496 acyl-CoA synthetase; Validated 100.0
PRK05620 576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07638 487 acyl-CoA synthetase; Validated 100.0
PRK06087 547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK07786 542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07008 539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08316 523 acyl-CoA synthetase; Validated 100.0
PRK07769 631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07470 528 acyl-CoA synthetase; Validated 100.0
PRK08315 559 AMP-binding domain protein; Validated 100.0
PRK12492 562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK07059 557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03098 515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PLN03102 579 acyl-activating enzyme; Provisional 100.0
PRK03584 655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK12583 558 acyl-CoA synthetase; Provisional 100.0
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK12476 612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK06145 497 acyl-CoA synthetase; Validated 100.0
PRK10946 536 entE enterobactin synthase subunit E; Provisional 100.0
TIGR01217 652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK06188 524 acyl-CoA synthetase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PLN03052 728 acetate--CoA ligase; Provisional 100.0
PRK07514 504 malonyl-CoA synthase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
TIGR02262 508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
TIGR03205 541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK06164 540 acyl-CoA synthetase; Validated 100.0
PRK06018 542 putative acyl-CoA synthetase; Provisional 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK08751 560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK09088 488 acyl-CoA synthetase; Validated 100.0
PRK13383 516 acyl-CoA synthetase; Provisional 100.0
PLN02479 567 acetate-CoA ligase 100.0
PRK08974 560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06710 563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06178 567 acyl-CoA synthetase; Validated 100.0
PRK05851 525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK13388 540 acyl-CoA synthetase; Provisional 100.0
TIGR01734 502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
PRK07867 529 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK13390 501 acyl-CoA synthetase; Provisional 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK09192 579 acyl-CoA synthetase; Validated 100.0
PRK08279 600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK13391 511 acyl-CoA synthetase; Provisional 100.0
PRK07787 471 acyl-CoA synthetase; Validated 100.0
PRK08162 545 acyl-CoA synthetase; Validated 100.0
PRK04813 503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK05850 578 acyl-CoA synthetase; Validated 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07798 533 acyl-CoA synthetase; Validated 100.0
PRK08276 502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07768 545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12406 509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK09029 458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
TIGR01923 436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK07445 452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
KOG1175 626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN03051 499 acyl-activating enzyme; Provisional 100.0
PRK07868 994 acyl-CoA synthetase; Validated 100.0
KOG1179 649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PRK08308 414 acyl-CoA synthetase; Validated 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
PRK07824 358 O-succinylbenzoic acid--CoA ligase; Provisional 99.95
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.94
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
TIGR02155 422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 99.9
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 99.86
TIGR03335 445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.79
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.68
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.6
COG1541 438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.59
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.15
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.55
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 94.13
PLN02620 612 indole-3-acetic acid-amido synthetase 89.82
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 84.78
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 84.27
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 81.16
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=8e-72  Score=558.49  Aligned_cols=479  Identities=49%  Similarity=0.832  Sum_probs=430.5

Q ss_pred             CCeeecCcc--CCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCCCCceEEEeHHHHHHHHHHHHHHHHHcCCC
Q 010566           24 GPVYRSLFA--KDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVE  101 (507)
Q Consensus        24 ~~~~~~~~~--~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~  101 (507)
                      +.++|+...  .+.++.......|+++.|++.+..+|+.+++.....++ ..+.|+.+||.|..+++..++..|+++|++
T Consensus        53 ~~~~~s~~~~~~~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~  131 (691)
T KOG1256|consen   53 DGSRRSAVLPREELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVK  131 (691)
T ss_pred             CCceeeeeccCCCCCCCCCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCC
Confidence            588999888  45566677899999999999999999999999884333 568899999999999999999999999999


Q ss_pred             CCCEEEEEcCCchhhHHHHHHHHhcCCEEEecCCCCCHHHHHHHHHhcCccEEEec-CCChhHHhhcCCC-CCCCccEEE
Q 010566          102 ERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVE-EKKIPEMLKTFPK-TTEHLKTIV  179 (507)
Q Consensus       102 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~-~~~~~~~v~  179 (507)
                      +++.|+|+..|++||+++.+||...|.++|||...++++++.++++++.+.++|++ .+....+.+.... ..+.++.++
T Consensus       132 ~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI  211 (691)
T KOG1256|consen  132 EDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAII  211 (691)
T ss_pred             CCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEE
Confidence            99999999999999999999999999999999999999999999999999999999 4555666666554 358899999


Q ss_pred             EecCCChhhHHHHhhcCceEeeHHHHHHcccCCCCCC-CCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhh
Q 010566          180 SFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDL-PVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLL  258 (507)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~  258 (507)
                      .++.............++.+++|++++..+....... .+..+++.+.|+|||||||.||||++||.|++..+..+....
T Consensus       212 ~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~  291 (691)
T KOG1256|consen  212 QLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLS  291 (691)
T ss_pred             EecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhh
Confidence            9999998888888888999999999999887665555 377899999999999999999999999999999766433322


Q ss_pred             hhccc-cCCCCcEEEEecChhHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHhhhhCCeEEEeCcHHHHHHHHHHHHHhh
Q 010566          259 ESVNE-KLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKIS  337 (507)
Q Consensus       259 ~~~~~-~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~vvl~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~  337 (507)
                      ..... ....+|++++++||.|++....-...++.|+.|.++++|+..+.+.+++.+||.+.++|.+|+++.+.+++...
T Consensus       292 ~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~  371 (691)
T KOG1256|consen  292 AAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQ  371 (691)
T ss_pred             hcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHh
Confidence            22222 23347999999999999999987777899999999999999999999999999999999999999999999999


Q ss_pred             ccchhHHHHHHHHHHHHH-hhhhcCCCCCCCcchhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHHhCCcEEee
Q 010566          338 SGGLLKKTLFNIAYSYKF-HNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQG  416 (507)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~~~~~~~~~~~v~~~  416 (507)
                      ..+.+++++|++|+.+|+ +.+..|..+. +++.+|++.++.+++.+|.++|.+++|++|++.++...++..+|++|+++
T Consensus       372 ~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eG  450 (691)
T KOG1256|consen  372 KSGFLKRKLFNFAMAYKLEHRLMKGKSRS-RDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEG  450 (691)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhCCCCcc-cchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeec
Confidence            999999999999999999 7788776444 89999999999999999999999999999999999999999999999999


Q ss_pred             cccccCccceeccCCCCCccCCccCccccCeeEEEeecCCCccccCCCCCCceEEEecCcccccccCCchhhhhhc-ccC
Q 010566          417 YGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDG  495 (507)
Q Consensus       417 YG~tE~~~~~~~~~~~~~~~~~svG~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg  495 (507)
                      ||+||+++.++...+++. ..+++|.|+|++++|++|++|-+..+.+  ..|||||||++||.||++||+.|++++ .||
T Consensus       451 YGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDG  527 (691)
T KOG1256|consen  451 YGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDG  527 (691)
T ss_pred             ccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccc
Confidence            999999977777777666 5599999999999999999988888776  489999999999999999999999999 999


Q ss_pred             ceeec-cEEEecC
Q 010566          496 WFHTG-MGVWEQL  507 (507)
Q Consensus       496 w~~TG-lg~~d~d  507 (507)
                      ||+|| +|++|++
T Consensus       528 WLhTGDiG~~~p~  540 (691)
T KOG1256|consen  528 WLHTGDIGEWDPN  540 (691)
T ss_pred             ccccccceeECCC
Confidence            99999 9999975

>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
2d1q_A 548 Crystal Structure Of The Thermostable Japanese Fire 4e-15
2d1s_A 548 Crystal Structure Of The Thermostable Japanese Fire 4e-15
3nyq_A 505 Malonyl-Coa Ligase Ternary Product Complex With Met 1e-14
2d1t_A 548 Crystal Structure Of The Thermostable Japanese Fire 1e-14
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 1e-13
4g37_A 555 Structure Of Cross-Linked Firefly Luciferase In Sec 6e-12
3iep_A 551 Firefly Luciferase Apo Structure (P41 Form) Length 6e-12
3a9u_A 536 Crystal Structures And Enzymatic Mechanisms Of A Po 7e-12
4g36_A 555 Photinus Pyralis Luciferase In The Adenylate-Formin 7e-12
1ba3_A 550 Firefly Luciferase In Complex With Bromoform Length 8e-12
3qya_A 582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 3e-11
4fuq_A 503 Crystal Structure Of Apo Matb From Rhodopseudomonas 5e-11
4gxr_A 503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 3e-10
4fut_A 503 Crystal Structure Of Atp Bound Matb From Rhodopseud 3e-10
4gxq_A 506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 3e-10
1ult_A 541 Crystal Structure Of Tt0168 From Thermus Thermophil 4e-10
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 9e-10
3r44_A 517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 9e-07
3ipl_A 501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 1e-06
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 1e-06
3g7s_A 549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 1e-05
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 4e-05
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 4e-05
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 7e-05
3etc_A 580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 4e-04
3kxw_A 590 The Crystal Structure Of Fatty Acid Amp Ligase From 5e-04
3e7w_A 511 Crystal Structure Of Dlta: Implications For The Rea 6e-04
1amu_A 563 Phenylalanine Activating Domain Of Gramicidin Synth 7e-04
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure 
Iteration: 1

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 179/440 (40%), Gaps = 76/440 (17%)
Query: 80  TYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGA 139
           +Y E  +    +  A++  G+   G+  +   NC E+ I + A   +G+   P  +    
Sbjct: 54  SYAEYLEKSXXLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTL 113
Query: 140 GAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAV 199
             +   +  S  +I F  +K + +++ T  KT   +KTIV       + + +   Y    
Sbjct: 114 RELVHSLGISKPTIVFSSKKGLDKVI-TVQKTVTTIKTIVIL-----DSKVDYRGY---- 163
Query: 200 YSWDEFLQLGENKQFD------LPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAG 253
              D F++      F       + V +K  +  IM +SG+TG PKGV +++ENIVT  + 
Sbjct: 164 QCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSH 223
Query: 254 VKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNG-AAIGFWRGDVKLLLEDIGE 312
            +  +     +++     ++ +P  H F       ++  G   +   + D +  L+ + +
Sbjct: 224 ARDPI--YGNQVSPGTAVLTVVPFHHGFGMFTTLGYLICGFRVVMLTKFDEETFLKTLQD 281
Query: 313 LKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIAD 372
            K T    VP     +++ LN         K  L N    Y   NL +            
Sbjct: 282 YKCTSVILVPT----LFAILN---------KSELLN---KYDLSNLVE------------ 313
Query: 373 KIVFDKVKQSFGGRVRLILSGAAPLTPHV-ETFLRVVACAHVLQGYGLTETCAGTFVSLP 431
                            I SG APL+  V E   R      V QGYGLTET +   ++ P
Sbjct: 314 -----------------IASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIIT-P 355
Query: 432 NEMSMIGTVGPPVPNVDVCLESVPEMEYD---ALSSTPRGEVCVKGSTVFSGYYKREDLT 488
                 G  G  VP     L     ++ D   +L    RGEVCVKG  +  GY    + T
Sbjct: 356 EGDDKPGASGKVVP-----LFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVNNPEAT 410
Query: 489 KEVM-VDGWFHTG-MGVWEQ 506
           KE++  +GW HTG +G +++
Sbjct: 411 KELIDEEGWLHTGDIGYYDE 430
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
2d1s_A 548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 1e-58
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 4e-58
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 1e-57
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 5e-57
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 2e-56
3r44_A 517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 3e-56
3ipl_A 501 2-succinylbenzoate--COA ligase; structural genomic 2e-55
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 5e-54
4fuq_A 503 Malonyl COA synthetase; ANL superfamily, methylma 9e-53
1t5h_X 504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-51
2v7b_A 529 Benzoate-coenzyme A ligase; benzoate oxidation, be 3e-51
3nyq_A 505 Malonyl-COA ligase; A/B topology ababa sandwich be 2e-49
3o83_A 544 Peptide arylation enzyme; ligase, adenylation of 2 2e-35
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-34
1mdb_A 539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 2e-32
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 2e-30
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 2e-29
3etc_A 580 AMP-binding protein; adenylate-forming acyl-COA sy 4e-25
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 5e-15
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 6e-10
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 4e-14
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-08
1amu_A 563 GRSA, gramicidin synthetase 1; peptide synthetase, 1e-13
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 3e-13
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 2e-07
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 4e-13
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 6e-13
3l8c_A 521 D-alanine--poly(phosphoribitol) ligase subunit 1; 9e-13
3fce_A 512 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-12
3e7w_A 511 D-alanine--poly(phosphoribitol) ligase subunit 1; 3e-12
3ite_A 562 SIDN siderophore synthetase; ligase, non-ribosomal 2e-11
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
 Score =  202 bits (516), Expect = 1e-58
 Identities = 105/490 (21%), Positives = 178/490 (36%), Gaps = 91/490 (18%)

Query: 26  VYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVY 85
           +            PI    S     R  +ER      +      +   G     +Y E  
Sbjct: 10  IVVGPKP----FYPIEEG-SAGTQLRKYMERYAKLGAIA---FTNAVTGVDY--SYAEYL 59

Query: 86  DLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFI 145
           +    +  A++  G+   G+  +   NC E+ I + A   +G+   P  +      +   
Sbjct: 60  EKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHS 119

Query: 146 ICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEF 205
           +  S  +I F  +K + +++      T     ++  SKV                  D F
Sbjct: 120 LGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYR----------GYQCLDTF 169

Query: 206 LQLGENKQFDL------PVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLE 259
           ++      F         V +K  +  IM +SG+TG PKGV +++ENIVT  +  +  + 
Sbjct: 170 IKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIY 229

Query: 260 SVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAI----GFWRGDVKLLLEDIGELKP 315
               +++     ++ +P  H F       ++  G  +     F   D +  L+ + + K 
Sbjct: 230 G--NQVSPGTAVLTVVPFHHGFGMFTTLGYLICGFRVVMLTKF---DEETFLKTLQDYKC 284

Query: 316 TIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIV 375
           T    VP     +++ LN                             K      + +K  
Sbjct: 285 TSVILVP----TLFAILN-----------------------------KS----ELLNK-- 305

Query: 376 FDKVKQSFGGRVRLILSGAAPLTPHV-ETFLRVVACAHVLQGYGLTETCAGTFVSLPNEM 434
           +D         +  I SG APL+  V E   R      V QGYGLTET +   ++ P   
Sbjct: 306 YDL------SNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIIT-PEGD 358

Query: 435 SMIGTVGPPVPNVD---VCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEV 491
              G  G  VP      + L++   +  +      RGEVCVKG  +  GY    + TKE+
Sbjct: 359 DKPGASGKVVPLFKAKVIDLDTKKSLGPNR-----RGEVCVKGPMLMKGYVNNPEATKEL 413

Query: 492 M-VDGWFHTG 500
           +  +GW HTG
Sbjct: 414 IDEEGWLHTG 423
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
3o83_A 544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3etc_A 580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3r44_A 517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
1mdb_A 539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
2d1s_A 548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 100.0
1t5h_X 504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
4gr5_A 570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
2v7b_A 529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
4fuq_A 503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
1amu_A 563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3e7w_A 511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3fce_A 512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3l8c_A 521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3ipl_A 501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A 505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3ite_A 562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
4gs5_A 358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 99.98
3qov_A 436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 99.97
2y27_A 437 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.97
2y4o_A 443 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.97
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.96
4eql_A 581 4-substituted benzoates-glutamate ligase GH3.12; f 95.13
4b2g_A 609 GH3-1 auxin conjugating enzyme; signaling protein, 94.42
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.54
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.01
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 89.88
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 86.68
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 81.54
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
Probab=100.00  E-value=2.4e-59  Score=491.00  Aligned_cols=407  Identities=20%  Similarity=0.317  Sum_probs=326.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHhCCCCCceeeEeeccCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhh
Q 010566           37 PAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEW  116 (507)
Q Consensus        37 ~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~  116 (507)
                      +..+....|+.++|.++++++||++|++...  ++..+  +++||+||.++++++|++|+++|+++||+|+|+++|++++
T Consensus        13 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~a~~--~~~~~--~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~   88 (550)
T 3rix_A           13 PFYPLEDGTAGEQLHKAMKRYALVPGTIAFT--DAHIE--VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF   88 (550)
T ss_dssp             CSSCCCCSCHHHHHHHHHHHHHTSTTCEEEE--ETTTC--CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCceEEEee--ecCCC--cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccH
Confidence            4445566899999999999999999987320  22111  5799999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEecCCCCCHHHHHHHHHhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcC
Q 010566          117 IIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYG  196 (507)
Q Consensus       117 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  196 (507)
                      +++++||+++|++++|++|.++.+++.++++.++++++|++.+....+....... +.+..++.++.....         
T Consensus        89 ~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------  158 (550)
T 3rix_A           89 FMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKL-PIIQKIIIMDSKTDY---------  158 (550)
T ss_dssp             HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHC-TTCCEEEETTCSSCB---------
T ss_pred             HHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhC-CCcceEEEEcCCccc---------
Confidence            9999999999999999999999999999999999999999988766554433222 455666666543211         


Q ss_pred             ceEeeHHHHHHcccCCC------CCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcE
Q 010566          197 LAVYSWDEFLQLGENKQ------FDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDV  270 (507)
Q Consensus       197 ~~~~~~~~l~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~  270 (507)
                      .....++++........      .+.....++++++|+|||||||.||+|.++|.+++..+......+  ....+..+++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~~~~~~  236 (550)
T 3rix_A          159 QGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPI--FGNQIIPDTA  236 (550)
T ss_dssp             TTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTT--TSCCCCTTCE
T ss_pred             cCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhh--ccccCCCCcE
Confidence            12345666655432211      111222457899999999999999999999999998877643321  1135778999


Q ss_pred             EEEecChhHHHHHHHHHHHHHcCCEEEEecC-CHHHHHHHhhhhCCeEEEeCcHHHHHHHHHHHHHhhccchhHHHHHHH
Q 010566          271 YVSYLPLAHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNI  349 (507)
Q Consensus       271 ~~~~~pl~h~~g~~~~~~~l~~G~~vvl~~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~  349 (507)
                      +++.+|++|.+++...+.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++.                  
T Consensus       237 ~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------  298 (550)
T 3rix_A          237 ILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKS------------------  298 (550)
T ss_dssp             EEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHC------------------
T ss_pred             EEEechHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC------------------
Confidence            9999999999999888889999999999876 999999999999999999999999998652                  


Q ss_pred             HHHHHHhhhhcCCCCCCCcchhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHHhCCc-EEeecccccCccceec
Q 010566          350 AYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAH-VLQGYGLTETCAGTFV  428 (507)
Q Consensus       350 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~~~~~~~~~~~-v~~~YG~tE~~~~~~~  428 (507)
                                         +..+..++        +++|.+++||+++++++.+.+.+.++.. +++.||+||+++.++.
T Consensus       299 -------------------~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~  351 (550)
T 3rix_A          299 -------------------TLIDKYDL--------SNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILI  351 (550)
T ss_dssp             -------------------CGGGGSCC--------TTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEE
T ss_pred             -------------------ccccccCc--------ccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceec
Confidence                               11111112        3899999999999999999999999875 9999999999988777


Q ss_pred             cCCCCCccCCccCccccCeeEEEeecCCCccccCCCCCCceEEEecCcccccccCCchhhhhhc-ccCceeec-cEEEec
Q 010566          429 SLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQ  506 (507)
Q Consensus       429 ~~~~~~~~~~svG~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~  506 (507)
                      ...... .++++|+|+|+++++|+|.++++.  ++.|+.|||+|+|++++.|||++|+.|.+.| .+|||+|| +|++|+
T Consensus       352 ~~~~~~-~~~~vG~~~~~~~~~i~d~~~~~~--~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~  428 (550)
T 3rix_A          352 TPEGDD-KPGAVGKVVPFFEAKVVDLDTGKT--LGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDE  428 (550)
T ss_dssp             CCTTCC-CTTEEEEECTTCEEEEECTTTCCB--CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT
T ss_pred             CCCCCC-CCCCcccccCCcEEEEEeCCCCcC--CCCCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeC
Confidence            665543 458999999999999999333444  4456999999999999999999999999999 89999999 999998


Q ss_pred             C
Q 010566          507 L  507 (507)
Q Consensus       507 d  507 (507)
                      |
T Consensus       429 d  429 (550)
T 3rix_A          429 D  429 (550)
T ss_dssp             T
T ss_pred             C
Confidence            6
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 507
d1pg4a_ 643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 8e-48
d1v25a_ 534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 4e-42
d1ry2a_ 640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 6e-38
d1lcia_ 541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 6e-37
d3cw9a1 503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 1e-21
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 7e-18
d1amua_ 514 e.23.1.1 (A:) Phenylalanine activating domain of g 3e-08
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 1e-15
d1mdba_ 536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 7e-05
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  173 bits (439), Expect = 8e-48
 Identities = 66/487 (13%), Positives = 143/487 (29%), Gaps = 88/487 (18%)

Query: 46  CWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK 105
             +     ++ N +   +        ++      +Y+E++  V +  N +   G+++   
Sbjct: 74  AANCLDRHLQENGDRTAIIWEGDDTSQSKHI---SYRELHRDVCRFANTLLDLGIKKGDV 130

Query: 106 CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK------ 159
             IY    PE  + M AC  +G     ++      AV   I  S   +    ++      
Sbjct: 131 VAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGR 190

Query: 160 KIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVK 219
            IP              T V    V      +I+        W + ++    +     + 
Sbjct: 191 SIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAM- 249

Query: 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAH 279
              D   I+YTSG+TG PKGV+ +    + + A     +          D+Y     +  
Sbjct: 250 NAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFD----YHPGDIYWCTADVGW 305

Query: 280 IFDRAIEEVF--ISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGL 332
           +       ++  ++ GA    + G         + + + + +  I    P  +  +    
Sbjct: 306 VTG-HSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRAL---- 360

Query: 333 NQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILS 392
                                    + +G K +E +  +               +R++ S
Sbjct: 361 -------------------------MAEGDKAIEGTDRS--------------SLRILGS 381

Query: 393 GAAPLTPHV-ETFLRVV--ACAHVLQGYGLTETCAGTFVSLPNEMSM-IGTVGPPVPNVD 448
              P+ P   E + + +      V+  +  TET       LP  + +  G+   P   V 
Sbjct: 382 VGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQ 441

Query: 449 VCL-----ESVPEMEYDALSSTPRGEVCVKGS--TVFSGYYKREDLTKE---VMVDGWFH 498
             L                     G + +  S        +   +  ++         + 
Sbjct: 442 PALVDNEGHPQEGAT--------EGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYF 493

Query: 499 TG-MGVW 504
           +G     
Sbjct: 494 SGDGARR 500
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1ry2a_ 640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_ 536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Long chain fatty acid-CoA ligase TT0168
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-55  Score=457.41  Aligned_cols=397  Identities=22%  Similarity=0.304  Sum_probs=328.6

Q ss_pred             CCCCCHHHHHHHHHHhCCCCCceeeEeeccCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhhHHHH
Q 010566           41 PGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM  120 (507)
Q Consensus        41 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~  120 (507)
                      +...||.++|+++++++||++|+++.   +  ++.++++||+||.++++++|+.|.+.|+++||+|+|+++|++++++++
T Consensus         8 ~~~~~l~~~l~~~a~~~pd~~av~~~---~--~g~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~n~~e~~~~~   82 (534)
T d1v25a_           8 DEELNLWDFLERAAALFGRKEVVSRL---H--TGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAY   82 (534)
T ss_dssp             CCCCCTHHHHHHHHHHSTTCEEEEEC---T--TSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHcCCCeEEEEe---c--CCceEEEcHHHHHHHHHHHHHHHHHCCcCCCCEEEEEeCCCHHHHHHH
Confidence            34558999999999999999999975   3  345678999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCEEEecCCCCCHHHHHHHHHhcCccEEEecCCChhHHhhcCCCCCCCccEEEEecCCChhhHHHHhhcCceEe
Q 010566          121 EACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVY  200 (507)
Q Consensus       121 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~  200 (507)
                      |||+++|++++|++|.++.+++.++++.++++.++++.............. ..+...+........          ...
T Consensus        83 lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~  151 (534)
T d1v25a_          83 FAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGEL-KTVQHFVVMDEKAPE----------GYL  151 (534)
T ss_dssp             HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGC-SSCCEEEESSSCCCT----------TCE
T ss_pred             HHHHHhCcEEEecCCCCCHHHHHHHHHhhccccccccchhhhhHHHHhhcc-cccceeEEeeccccc----------ccc
Confidence            999999999999999999999999999999999999988776655544333 455555554433211          011


Q ss_pred             eHHHHHHcccCCCCCCCCCCCCCeEEEEeccCCCCCCceeeeccHHHHHHHhhhhhhhhhccccCCCCcEEEEecChhHH
Q 010566          201 SWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHI  280 (507)
Q Consensus       201 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~  280 (507)
                      .....    ...........++++++++|||||||.||+|.++|.+++.......   ..........+++++++|++|.
T Consensus       152 ~~~~~----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~---~~~~~~~~~~d~~~~~~p~~~~  224 (534)
T d1v25a_         152 AYEEA----LGEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAAS---LVDGTALSEKDVVLPVVPMFHV  224 (534)
T ss_dssp             EHHHH----CCSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTT---STTTTCCCTTCEEEECSCTTSH
T ss_pred             ccccc----ccccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhh---hhcccccccccccccccchhhh
Confidence            11111    1112234455678999999999999999999999999987665432   2234456788999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEecC--CHHHHHHHhhhhCCeEEEeCcHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhh
Q 010566          281 FDRAIEEVFISNGAAIGFWRG--DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNL  358 (507)
Q Consensus       281 ~g~~~~~~~l~~G~~vvl~~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  358 (507)
                      +++...+..+..|+.+++...  ++..+...+.++++|++.++|.++..++........                     
T Consensus       225 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~---------------------  283 (534)
T d1v25a_         225 NAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGH---------------------  283 (534)
T ss_dssp             HHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTC---------------------
T ss_pred             ccccccceeeeecceeeeccccccccccchhhhhccccccccCchhhhhhhhhhccccc---------------------
Confidence            999988888888887777654  899999999999999999999999988765433321                     


Q ss_pred             hcCCCCCCCcchhhHHhHHHHHHHcCCceEEEEEcCCCCCHHHHHHHHHHhCCcEEeecccccCccceeccCCCCC----
Q 010566          359 KKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEM----  434 (507)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~----  434 (507)
                                              ..++||.+++||++++....+.+++ ++.++++.||+||++.++........    
T Consensus       284 ------------------------~~~~lr~~~~gG~~~~~~~~~~~~~-~~~~i~~~yG~te~~~~~~~~~~~~~~~~~  338 (534)
T d1v25a_         284 ------------------------RLKTLRRLVVGGSAAPRSLIARFER-MGVEVRQGYGLTETSPVVVQNFVKSHLESL  338 (534)
T ss_dssp             ------------------------CCSSCCEEEECSSCCCHHHHHHHHH-TTCEEEEEEECGGGSSEEEECCCCGGGTTS
T ss_pred             ------------------------cccceeEEEEecCCCCHHHHHHHHH-hCCeeeeeccccccccceeecccCcccccc
Confidence                                    1248999999999999999999886 58999999999999998876544321    


Q ss_pred             ------ccCCccCccccCeeEEEeecCCCccccCCCCCCceEEEecCcccccccCCchhhhhhc-ccCceeec-cEEEec
Q 010566          435 ------SMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM-VDGWFHTG-MGVWEQ  506 (507)
Q Consensus       435 ------~~~~svG~p~pg~~i~ivd~~~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG-lg~~d~  506 (507)
                            ..++++|+|+||++++|+| ++++.++.+.++.|||+|+|++++.||+++++.+.+.| .||||+|| +|++|+
T Consensus       339 ~~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~~~~dg~~~TGDlg~~~~  417 (534)
T d1v25a_         339 SEEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDE  417 (534)
T ss_dssp             CHHHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECT
T ss_pred             CccccccccccceeccCCcEEEEEC-CCCCCCCCCCCeeEEEEEcCCcccceecCChhhhhhhcccCCCCccCceeEECC
Confidence                  2247899999999999999 99999999888999999999999999999999999999 89999999 999998


Q ss_pred             C
Q 010566          507 L  507 (507)
Q Consensus       507 d  507 (507)
                      |
T Consensus       418 ~  418 (534)
T d1v25a_         418 E  418 (534)
T ss_dssp             T
T ss_pred             C
Confidence            6
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure