Citrus Sinensis ID: 010632

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-----
MVLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSKTTTN
cHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHccHHccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccEEcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcEcEcccccccccccccEcccccHHHcccccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccccccccHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEccccccHHccccccccccccccEccccccccccccccccccccEccHHHHHHHHHHHHHHHcccccc
MVLSIlrkmdpvtkFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILffegqrsgrlppnqqltwrgnsglsdgssyhvdlvggyydagdnvkfglpmAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLlkastatpgalyvqvgdpnmdhhcwerpedmdtprnvykvstqnpgsdVAAETAAALAAASVvfkdsdpsysTKLLKTAMKVFDFadkyrgsysdslnsvvcpfycsysgyldELLWGASWLHRASQNSSYLAYIQSnghilgaddddysfswddkraGTKVLLSKGFLEKNTQEFQLYKahsdnyicslipgsssfqaqytagglfykasesnlqYVTTTAFLLLTYAKYlssnggvatcgssTVKAENLIALAKKQVDyilgdnpakmsymvgfgerypqhvhhrgsslpsihahpdhiacndgfqylysrspnpnvltgailggpdnrdnfaddrnnyqqsepatyinapfVGAVAFFSSKTTTN
mvlsilrkmdpvtKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASvvfkdsdpsYSTKLLKTAMKVFDFADKYrgsysdslnsVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSepatyinapfVGAVAFFSSKTTTN
MVLSILRKMDPVTKFSLTLQIlgltlcalsllcsaFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVaaetaaalaaaSVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGAddddysfswddKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPdnrdnfaddrnnYQQSEPATYINAPFVGAVAFFSSKTTTN
****ILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQ***********TWRG***LSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWE****************************AALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILG********************ATYINAPFVGAVAFF*******
*************KFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAF*SSK****
MVLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQ**********SIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSKTTTN
*VLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSK****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSKTTTN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query505 2.2.26 [Sep-21-2011]
P05522494 Endoglucanase 1 OS=Persea N/A no 0.966 0.987 0.781 0.0
Q6YXT7523 Endoglucanase 19 OS=Oryza yes no 0.926 0.894 0.68 0.0
Q6Z715503 Endoglucanase 4 OS=Oryza no no 0.944 0.948 0.644 0.0
Q9SRX3501 Endoglucanase 1 OS=Arabid yes no 0.906 0.914 0.655 1e-178
O81416516 Endoglucanase 17 OS=Arabi no no 0.910 0.891 0.637 1e-176
Q8LQ92499 Endoglucanase 3 OS=Oryza no no 0.910 0.921 0.613 1e-174
O49296489 Endoglucanase 4 OS=Arabid no no 0.938 0.969 0.587 1e-162
Q9CAC1492 Endoglucanase 8 OS=Arabid no no 0.918 0.943 0.584 1e-161
Q652F9497 Endoglucanase 17 OS=Oryza no no 0.942 0.957 0.590 1e-161
Q9C9H5484 Endoglucanase 9 OS=Arabid no no 0.912 0.952 0.606 1e-161
>sp|P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/494 (78%), Positives = 431/494 (87%), Gaps = 6/494 (1%)

Query: 11  PVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRG 70
           P++ F L L      +C + + C + +   YSDAL KSILFFEGQRSG+LP NQ+LTWRG
Sbjct: 6   PLSLFHLLL------VCTVMVKCCSASDLHYSDALEKSILFFEGQRSGKLPTNQRLTWRG 59

Query: 71  NSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAI 130
           +SGLSDGSSYHVDLVGGYYDAGDN+KFGLPMAFTTT+L+W +IEFG  M   +ENA+AA+
Sbjct: 60  DSGLSDGSSYHVDLVGGYYDAGDNLKFGLPMAFTTTMLAWGIIEFGCLMPEQVENARAAL 119

Query: 131 RWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAET 190
           RW TDYLLKASTAT  +LYVQVG+PN DH CWERPEDMDTPRNVYKVSTQNPGSDVAAET
Sbjct: 120 RWSTDYLLKASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQNPGSDVAAET 179

Query: 191 AAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLD 250
           AAALAAAS+VF DSD SYSTKLL TA+KVF+FAD+YRGSYSDSL SVVCPFYCSYSGY D
Sbjct: 180 AAALAAASIVFGDSDSSYSTKLLHTAVKVFEFADQYRGSYSDSLGSVVCPFYCSYSGYND 239

Query: 251 ELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNT 310
           ELLWGASWLHRASQN+SY+ YIQSNGH LGADDDDYSFSWDDKR GTKVLLSKGFL+   
Sbjct: 240 ELLWGASWLHRASQNASYMTYIQSNGHTLGADDDDYSFSWDDKRVGTKVLLSKGFLQDRI 299

Query: 311 QEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLS 370
           +E QLYK H+DNYICSLIPG+SSFQAQYT GGL YK S SNLQYVT+TAFLLLTYA YL+
Sbjct: 300 EELQLYKVHTDNYICSLIPGTSSFQAQYTPGGLLYKGSASNLQYVTSTAFLLLTYANYLN 359

Query: 371 SNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPS 430
           S+GG A+CG++TV A+NLI+LAKKQVDYILG NPAKMSYMVGFGERYPQHVHHRGSSLPS
Sbjct: 360 SSGGHASCGTTTVTAKNLISLAKKQVDYILGQNPAKMSYMVGFGERYPQHVHHRGSSLPS 419

Query: 431 IHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAP 490
           +  HP+ I CN GFQYLYS  PNPN+L GAILGGPDNRD+F+DDRNNYQQSEPATYINAP
Sbjct: 420 VQVHPNSIPCNAGFQYLYSSPPNPNILVGAILGGPDNRDSFSDDRNNYQQSEPATYINAP 479

Query: 491 FVGAVAFFSSKTTT 504
            VGA+AFF++   T
Sbjct: 480 LVGALAFFAANPVT 493
Involved in ripening fruit process.
Persea americana (taxid: 3435)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q6YXT7|GUN19_ORYSJ Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z715|GUN4_ORYSJ Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description
>sp|O49296|GUN4_ARATH Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1 Back     alignment and function description
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q652F9|GUN17_ORYSJ Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1 Back     alignment and function description
>sp|Q9C9H5|GUN9_ARATH Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query505
2290681505 acidic cellulase [Citrus sinensis] 1.0 1.0 0.998 0.0
224057986494 predicted protein [Populus trichocarpa] 0.976 0.997 0.847 0.0
255555765494 endo-1,4-beta-glucanase, putative [Ricin 0.978 1.0 0.838 0.0
429326590494 korrigan [Populus tomentosa] 0.976 0.997 0.839 0.0
13383303494 endo-1,4-beta glucanase [Populus alba] 0.976 0.997 0.837 0.0
347466579494 endo-1,4-beta-glucanase [Populus trichoc 0.976 0.997 0.833 0.0
429326592494 korrigan [Populus tomentosa] 0.976 0.997 0.831 0.0
4691450494 endo-1,4-beta glucanase [Populus alba] g 0.976 0.997 0.829 0.0
1125032494 cellulase precursor [Populus alba] 0.976 0.997 0.833 0.0
359474153466 PREDICTED: endoglucanase 1 isoform 1, pa 0.912 0.989 0.874 0.0
>gi|2290681|gb|AAB65155.1| acidic cellulase [Citrus sinensis] Back     alignment and taxonomy information
 Score = 1047 bits (2708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/505 (99%), Positives = 505/505 (100%)

Query: 1   MVLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRL 60
           MVLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRL
Sbjct: 1   MVLSILRKMDPVTKFSLTLQILGLTLCALSLLCSAFTFQDYSDALGKSILFFEGQRSGRL 60

Query: 61  PPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQ 120
           PPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQ
Sbjct: 61  PPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQ 120

Query: 121 NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ 180
           NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ
Sbjct: 121 NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ 180

Query: 181 NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCP 240
           NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCP
Sbjct: 181 NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCP 240

Query: 241 FYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVL 300
           +YCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVL
Sbjct: 241 YYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVL 300

Query: 301 LSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAF 360
           LSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAF
Sbjct: 301 LSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAF 360

Query: 361 LLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQH 420
           LLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQH
Sbjct: 361 LLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQH 420

Query: 421 VHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQ 480
           VHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQ
Sbjct: 421 VHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQ 480

Query: 481 SEPATYINAPFVGAVAFFSSKTTTN 505
           SEPATYINAPFVGAVAFFSSKTTTN
Sbjct: 481 SEPATYINAPFVGAVAFFSSKTTTN 505

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224057986|ref|XP_002299423.1| predicted protein [Populus trichocarpa] gi|222846681|gb|EEE84228.1| predicted protein [Populus trichocarpa] gi|347466577|gb|AEO97201.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466631|gb|AEO97228.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255555765|ref|XP_002518918.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223541905|gb|EEF43451.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|429326590|gb|AFZ78635.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|13383303|dbj|BAB39482.1| endo-1,4-beta glucanase [Populus alba] Back     alignment and taxonomy information
>gi|347466579|gb|AEO97202.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466633|gb|AEO97229.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326592|gb|AFZ78636.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|4691450|dbj|BAA77239.1| endo-1,4-beta glucanase [Populus alba] gi|13383305|dbj|BAB39483.1| endo-1,4-beta-glucanase [Populus alba] Back     alignment and taxonomy information
>gi|1125032|dbj|BAA06877.1| cellulase precursor [Populus alba] Back     alignment and taxonomy information
>gi|359474153|ref|XP_002279780.2| PREDICTED: endoglucanase 1 isoform 1, partial [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query505
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.904 0.912 0.613 8e-156
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.908 0.889 0.595 4.5e-153
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.904 0.944 0.568 3.7e-142
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.912 0.952 0.565 7.8e-142
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.916 0.941 0.547 3e-140
TAIR|locus:2028015489 GH9B6 "glycosyl hydrolase 9B6" 0.910 0.940 0.557 7.2e-139
TAIR|locus:2120242497 GH9B18 "glycosyl hydrolase 9B1 0.912 0.927 0.543 6.5e-138
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.897 0.947 0.508 7.2e-123
TAIR|locus:2120232493 GH9B17 "glycosyl hydrolase 9B1 0.912 0.935 0.476 2.4e-122
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.897 0.945 0.497 2.3e-119
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1519 (539.8 bits), Expect = 8.0e-156, P = 8.0e-156
 Identities = 282/460 (61%), Positives = 342/460 (74%)

Query:    40 DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGL 99
             +Y DAL KSILFFEGQRSG+LPPNQ++TWR NSGLSDGS+ +VDLVGGYYDAGDN+KFG 
Sbjct:    43 NYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGF 102

Query:   100 PMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDH 159
             PMAFTTT+LSWS+IEFG  M++ L NAK AIRW TD+LLKA T+ P  +YVQVGDPNMDH
Sbjct:   103 PMAFTTTMLSWSLIEFGGLMKSELPNAKDAIRWATDFLLKA-TSHPDTIYVQVGDPNMDH 161

Query:   160 HCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAMKV 219
              CWERPEDMDTPR+V+KV   NPGSD+           S+VF+  DPSYS  LL+ A+ V
Sbjct:   162 ACWERPEDMDTPRSVFKVDKNNPGSDIAGEIAAALAAASIVFRKCDPSYSNHLLQRAITV 221

Query:   220 FDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHIL 279
             F FADKYRG YS  L   VCPFYCSYSGY DELLWGA+WL +A+ N +YL YI++NG IL
Sbjct:   222 FTFADKYRGPYSAGLAPEVCPFYCSYSGYQDELLWGAAWLQKATNNPTYLNYIKANGQIL 281

Query:   280 GAXXXXXXXXXXXKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYT 339
             GA           K  G ++LLSK FL +  +  + YK H+D++ICS++PG+SS  +QYT
Sbjct:   282 GADEFDNMFSWDNKHVGARILLSKEFLIQKVKSLEEYKEHADSFICSVLPGASS--SQYT 339

Query:   340 AGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYI 399
              GGL +K  ESN+QYVT+T+FLLLTYAKYL+S   VA CG S V    L ++AKKQVDY+
Sbjct:   340 PGGLLFKMGESNMQYVTSTSFLLLTYAKYLTSARTVAYCGGSVVTPARLRSIAKKQVDYL 399

Query:   400 LGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTG 459
             LG NP KMSYMVG+G +YP+ +HHRGSSLPS+  HP  I C+DGF    S+SPNPN L G
Sbjct:   400 LGGNPLKMSYMVGYGLKYPRRIHHRGSSLPSVAVHPTRIQCHDGFSLFTSQSPNPNDLVG 459

Query:   460 AILGGPXXXXXXXXXXXXYQQSEPATYINAPFVGAVAFFS 499
             A++GGP            Y +SEPATYINAP VGA+A+ +
Sbjct:   460 AVVGGPDQNDQFPDERSDYGRSEPATYINAPLVGALAYLA 499
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0007389 "pattern specification process" evidence=TAS
GO:0008810 "cellulase activity" evidence=TAS
GO:0009624 "response to nematode" evidence=IEP
GO:0009855 "determination of bilateral symmetry" evidence=RCA
GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA
GO:0010014 "meristem initiation" evidence=RCA
GO:0010051 "xylem and phloem pattern formation" evidence=RCA
GO:0010093 "specification of floral organ identity" evidence=RCA
GO:0048440 "carpel development" evidence=RCA
GO:0048507 "meristem development" evidence=RCA
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120242 GH9B18 "glycosyl hydrolase 9B18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P22503GUN_PHAVU3, ., 2, ., 1, ., 40.53200.89500.9112N/Ano
Q9SRX3GUN1_ARATH3, ., 2, ., 1, ., 40.65500.90690.9141yesno
P05522GUN1_PERAE3, ., 2, ., 1, ., 40.78130.96630.9878N/Ano
Q6YXT7GUN19_ORYSJ3, ., 2, ., 1, ., 40.680.92670.8948yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query505
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN03009495 PLN03009, PLN03009, cellulase 0.0
PLN02175484 PLN02175, PLN02175, endoglucanase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-179
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-175
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-174
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-171
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information 
 Score =  739 bits (1908), Expect = 0.0
 Identities = 316/501 (63%), Positives = 383/501 (76%), Gaps = 17/501 (3%)

Query: 15  FSLTLQILGLTLCALSLLCSAFTF----------------QDYSDALGKSILFFEGQRSG 58
            S TL  L + L    LLC+ F+                  +Y DAL KSILFFEGQRSG
Sbjct: 5   LSSTLLRLFIFLAFSLLLCNGFSSSSNNPFHHRHHPRLASHNYRDALTKSILFFEGQRSG 64

Query: 59  RLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSS 118
           +LP +Q++TWR +SGLSDGS+ HVDLVGGYYDAGDNVKFG PMAFTTT+LSWSVIEFG  
Sbjct: 65  KLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGL 124

Query: 119 MQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVS 178
           M++ L+NAK AIRW TDYLLKA TA P  +YVQVGD N DH CWERPEDMDTPR+V+KV 
Sbjct: 125 MKSELQNAKDAIRWATDYLLKA-TAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVD 183

Query: 179 TQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVV 238
              PGSDVAAETAAALAAAS+VF+ SDP+YS  L++ A++VF FADKYRG+YS+ L   V
Sbjct: 184 KNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDV 243

Query: 239 CPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTK 298
           CPFYCSYSGY DELLWGA+WLH+A++N +YL YIQ NG ILGAD+ D +F WD+K  G +
Sbjct: 244 CPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQILGADEFDNTFGWDNKHVGAR 303

Query: 299 VLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTT 358
           +LLSK FL +  Q    YK H+DN+ICS+IPG+     QYT GGL +K S+SN+QYVT+T
Sbjct: 304 ILLSKAFLVQKVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVTST 363

Query: 359 AFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYP 418
           +FLLLTYAKYL+S   V  CG + V    L ++AKKQVDY+LGDNP KMSYMVG+G RYP
Sbjct: 364 SFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYP 423

Query: 419 QHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNY 478
           + +HHRGSSLPS+ AHP  I C+ GF  + S+SPNPNVL GA++GGPD  D F D+R++Y
Sbjct: 424 RRIHHRGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDY 483

Query: 479 QQSEPATYINAPFVGAVAFFS 499
           +QSEPATYINAP VGA+A+ +
Sbjct: 484 EQSEPATYINAPLVGALAYLA 504

Length = 510
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 505
PLN02266510 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02171 629 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.16
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 95.83
KOG2787403 consensus Lanthionine synthetase C-like protein 1 94.83
COG1331667 Highly conserved protein containing a thioredoxin 94.81
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 94.5
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 91.17
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 91.04
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 85.21
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1e-126  Score=1010.31  Aligned_cols=485  Identities=64%  Similarity=1.132  Sum_probs=445.7

Q ss_pred             HHHHHHHHHhh-hhh-c--------ccCCChhhHHHHHHHHHHhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccc
Q 010632           18 TLQILGLTLCA-LSL-L--------CSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGG   87 (505)
Q Consensus        18 ~~~~~~~~~~~-~~~-~--------~~~~~~~~Y~~~l~~sl~ff~~QR~G~l~~~~~~~w~~~s~l~Dg~~~~~dlsGG   87 (505)
                      +|+..-+++|+ .++ +        ...+++++|.++|++||+||++||||++|++++++||+++|+.||.+.++||+||
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGG   93 (510)
T PLN02266         14 IFLAFSLLLCNGFSSSSNNPFHHRHHPRLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGG   93 (510)
T ss_pred             HHHHHHHHhcCCCccccCCcccccCCCCCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcccCCCc
Confidence            34445567787 222 2        3567889999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCcccccchHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHcccCCCCceEEEcCCCCCCCCCCCCCCC
Q 010632           88 YYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPED  167 (505)
Q Consensus        88 W~DAGD~~Ky~~~~a~s~~~L~~a~~ef~~~~~~~~pdiLde~kwg~D~llkmq~~~~g~~y~~vg~~~~dh~~W~~Pe~  167 (505)
                      |||||||+||++|+|+++++|+|+++||++.|.+++||||||||||+|||||| |+.+|+||+|||++..||.+|++||+
T Consensus        94 wyDAGD~~Kf~~p~a~s~t~L~w~~~ef~~~~~~~~pd~Ldelkw~~D~llk~-~~~~~~vy~qVg~~~~Dh~~W~~Pe~  172 (510)
T PLN02266         94 YYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKSELQNAKDAIRWATDYLLKA-TAHPDTIYVQVGDANKDHACWERPED  172 (510)
T ss_pred             ceeCCCCceecchHHHHHHHHHHHHHhhhhccccccHHHHHHHHHHHHHHHHh-ccCCCeEEEEeCCCCCCcccCCChhh
Confidence            99999999999999999999999999999999999999999999999999999 88999999999999999999999999


Q ss_pred             CCCCcceeecCCCCCchHHHHHHHHHHHHHhhhcccCChHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcccccccCCCC
Q 010632          168 MDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSG  247 (505)
Q Consensus       168 ~~~~R~~~~~~~~~p~s~~a~~~aAalA~as~vf~~~D~~~A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~~g~Y~s~~~  247 (505)
                      ++.+|++|.|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.+.+....+++|.+.++
T Consensus       173 ~~~~R~~y~i~~~~pgsd~a~e~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~s~s~  252 (510)
T PLN02266        173 MDTPRSVFKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSG  252 (510)
T ss_pred             cCCCCeeEEeCCCCCchHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcccCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999877543334678887578


Q ss_pred             chhHHHHHHHHHHHHcCChhHHHHHHHcccccCCCCCCCccCccchhhHHHHhhcccccccchHHHHHHHHHHHHHHHHh
Q 010632          248 YLDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSL  327 (505)
Q Consensus       248 ~~De~~wAA~eLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~  327 (505)
                      +.||++|||+|||++|||++|+++++.....++.....+.++||++..|+++||++.+..+..+.++.|++.++.++|.+
T Consensus       253 ~~DEl~WAAawLy~ATGd~~Yl~~~~~~~~~~g~~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~~~d~~~~~~  332 (510)
T PLN02266        253 YQDELLWGAAWLHKATKNPTYLNYIQVNGQILGADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADNFICSV  332 (510)
T ss_pred             chHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccccccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999998875545433345689999999999999988544444567788999999999999


Q ss_pred             CCCCCCCcccccCCccccccCCChHHHHHHHHHHHHHHHhHhhhCCCccccCCCccchHHHHHHHHhcccccccCCCCCc
Q 010632          328 IPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKM  407 (505)
Q Consensus       328 ~~~~~~~~~~~t~~g~~w~~~w~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~  407 (505)
                      .+++++..+++||||+.|..+|||+||++|++||+++|++++..++.++.||+......+|+++|++|||||||+||+++
T Consensus       333 ~~~~~~~~~~~TpGGL~~~~~wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~NP~~~  412 (510)
T PLN02266        333 IPGAPFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKM  412 (510)
T ss_pred             cCCCCCCccccCCCeeEEeCCCCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCCCCCC
Confidence            88887767899999999999999999999999999999999988777888998777889999999999999999999999


Q ss_pred             ceEeeeCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccccccCCCCCCCcccCcCccccCcccccC
Q 010632          408 SYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYI  487 (505)
Q Consensus       408 SyVtG~G~~~p~~pHHR~s~~~~~~~~p~~~~c~~g~~~~~~~~pn~~~l~GalvGGPn~~d~y~D~~~~y~~nEvaId~  487 (505)
                      |||||||.|+|++||||+||||++..+|.++.|.+||.|++++.||||+|.||||||||..|.|.|+|.+|++|||||||
T Consensus       413 SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C~~g~~~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dy  492 (510)
T PLN02266        413 SYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYI  492 (510)
T ss_pred             ceEEecCCCCCccccccCCCCCCcccCccccCCCCCccccCCCCCCcceecceeecCCCCCCCCCccccccccCcceeec
Confidence            99999999999999999999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcccC
Q 010632          488 NAPFVGAVAFFSSKTT  503 (505)
Q Consensus       488 NA~lv~~la~l~~~~~  503 (505)
                      ||+||++||+|.+.-+
T Consensus       493 NA~~vgalA~l~~~yg  508 (510)
T PLN02266        493 NAPLVGALAYLAHSYG  508 (510)
T ss_pred             chHHHHHHHHHHHHhc
Confidence            9999999999987644

>PLN02308 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query505
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 3e-74
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 1e-73
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 5e-59
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 6e-57
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 2e-54
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 2e-54
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 2e-48
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 4e-37
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 4e-08
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  276 bits (705), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 174/459 (37%), Positives = 236/459 (51%), Gaps = 38/459 (8%)
Query: 40  DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGL 99
           DY   L  S+LF+E QRSGRLP +Q++TWR +S L+D      DL GGY+DAGD VKFG 
Sbjct: 4   DYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGF 63
Query: 100 PMAFTTTLLSWSVIEF--GSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNM 157
           PMA+T T+L+W +I+F  G S    L++ + A++W TDY +KA T +    Y QVG  + 
Sbjct: 64  PMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHT-SQNEFYGQVGQGDA 122
Query: 158 DHHCWERPEDMDTPRNVYKVSTQNPGSDVXXXXXXXXXXXSVVFKDSDPSYSTKLLKTAM 217
           DH  W RPEDM   R  YK+ T  PGSD+           S+VF++ D +YS  LL  A 
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182
Query: 218 KVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGH 277
           ++FDFA+ YRG YSDS+      FY S + Y DEL+W A+WL+RA+ +++YL   +S   
Sbjct: 183 QLFDFANNYRGKYSDSITDARN-FYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240
Query: 278 ILGAXXXXXXXXXXXKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQ 337
             G            K +G +VLL+K          Q YK    +Y+  LI        Q
Sbjct: 241 EFGLQNWGGGLNWDSKVSGVQVLLAK------LTNKQAYKDTVQSYVNYLINNQ-----Q 289
Query: 338 YTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVD 397
            T  GL Y      L++    AF++L  A+               + A +    A+ Q+D
Sbjct: 290 KTPKGLLYIDMWGTLRHAANAAFIMLEAAEL-------------GLSASSYRQFAQTQID 336
Query: 398 YILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVL 457
           Y LGD     S++ GFG   P   HHR SS P   A  D    N       S  PN +VL
Sbjct: 337 YALGD--GGRSFVCGFGSNPPTRPHHRSSSCPPAPATCDWNTFN-------SPDPNYHVL 387
Query: 458 TGAILGGPXXXXXXXXXXXXYQQSEPATYINAPFVGAVA 496
           +GA++GGP            Y  +E AT  NA F  A+A
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALA 426
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query505
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-178
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-178
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-178
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-174
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-167
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-166
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-165
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-153
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-137
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 6e-86
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  507 bits (1307), Expect = e-178
 Identities = 188/463 (40%), Positives = 258/463 (55%), Gaps = 38/463 (8%)

Query: 40  DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGL 99
           DY   L  S+LF+E QRSGRLP +Q++TWR +S L+D      DL GGY+DAGD VKFG 
Sbjct: 4   DYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGF 63

Query: 100 PMAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNM 157
           PMA+T T+L+W +I+F +       L++ + A++W TDY +KA T+     Y QVG  + 
Sbjct: 64  PMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTS-QNEFYGQVGQGDA 122

Query: 158 DHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAM 217
           DH  W RPEDM   R  YK+ T  PGSD+A ETAAALAAAS+VF++ D +YS  LL  A 
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182

Query: 218 KVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGH 277
           ++FDFA+ YRG YSDS  +    FY S + Y DEL+W A+WL+RA+ +++YL   +S   
Sbjct: 183 QLFDFANNYRGKYSDS-ITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240

Query: 278 ILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQ 337
             G  +     +WD K +G +VLL+K          Q YK    +Y+  LI        Q
Sbjct: 241 EFGLQNWGGGLNWDSKVSGVQVLLAK------LTNKQAYKDTVQSYVNYLINN-----QQ 289

Query: 338 YTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVD 397
            T  GL Y      L++    AF++L  A+               + A +    A+ Q+D
Sbjct: 290 KTPKGLLYIDMWGTLRHAANAAFIMLEAAELG-------------LSASSYRQFAQTQID 336

Query: 398 YILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVL 457
           Y LGD     S++ GFG   P   HHR SS P   A          +    S  PN +VL
Sbjct: 337 YALGDGG--RSFVCGFGSNPPTRPHHRSSSCPPAPATC-------DWNTFNSPDPNYHVL 387

Query: 458 TGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSS 500
           +GA++GGPD  DN+ DDR++Y  +E AT  NA F  A+A   +
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query505
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.69
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.3
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 96.02
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.89
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 94.53
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 94.37
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 94.04
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 92.64
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 92.36
1nc5_A373 Hypothetical protein YTER; structural genomics, he 90.98
1nc5_A373 Hypothetical protein YTER; structural genomics, he 90.44
3k11_A445 Putative glycosyl hydrolase; structural genomics, 89.0
3pmm_A382 Putative cytoplasmic protein; structural genomics, 87.94
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 86.75
3k11_A445 Putative glycosyl hydrolase; structural genomics, 86.66
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 86.59
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 83.08
3pmm_A382 Putative cytoplasmic protein; structural genomics, 80.26
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=1.7e-112  Score=905.26  Aligned_cols=435  Identities=38%  Similarity=0.647  Sum_probs=386.8

Q ss_pred             CCChhhHHHHHHHHHHhhHHhcCCCC-CCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchHHHHHHHHHHHH
Q 010632           35 AFTFQDYSDALGKSILFFEGQRSGRL-PPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVI  113 (505)
Q Consensus        35 ~~~~~~Y~~~l~~sl~ff~~QR~G~l-~~~~~~~w~~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~  113 (505)
                      +.++++|.++|+++|+||++||||++ |+.++++||++||++||++.++||+|||||||||+||++|+++++++|+|+++
T Consensus        20 ~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~   99 (466)
T 2xfg_A           20 ATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVY   99 (466)
T ss_dssp             -CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHH
Confidence            34567999999999999999999997 99999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhcc--hhhHHHHHHHHHHHHHHHHHcccCCCCceEEEcCCCCCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHH
Q 010632          114 EFGSSM--QNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETA  191 (505)
Q Consensus       114 ef~~~~--~~~~pdiLde~kwg~D~llkmq~~~~g~~y~~vg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~a  191 (505)
                      ||++.|  .+++||||||||||+|||||| |+++|+||+|||++..||.+|++||+++.+|++|.++.++|+|++++++|
T Consensus       100 e~~~~~~~~~~~~d~ldeikwg~D~llk~-~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~A  178 (466)
T 2xfg_A          100 EYEDAFKQSGQYNHILNNIKWACDYFIKC-HPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETS  178 (466)
T ss_dssp             HCHHHHHHTTCHHHHHHHHHHHHHHHHHT-CSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHH
T ss_pred             HhHHHHhcCCCchHHHHHHHHHHHHHHHh-ccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHH
Confidence            999999  479999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccCChHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHcCChhHHHH
Q 010632          192 AALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAY  271 (505)
Q Consensus       192 AalA~as~vf~~~D~~~A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~~g~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~  271 (505)
                      ||||+||||||++||+||++||++||++|+||++||+.|...   ..+++|+|++++.||++|||+|||++|||++|+++
T Consensus       179 AAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~---~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~  255 (466)
T 2xfg_A          179 AALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYT---AANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDK  255 (466)
T ss_dssp             HHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC---TTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCC---ccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHH
Confidence            999999999999999999999999999999999999988432   25689999889999999999999999999999999


Q ss_pred             HHHcccccCCC------CCCCccCccchhhHHHHhhcccccccch-HHHHHHHHHHHHHHHHhCCCCCCCcccccCCccc
Q 010632          272 IQSNGHILGAD------DDDYSFSWDDKRAGTKVLLSKGFLEKNT-QEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLF  344 (505)
Q Consensus       272 ~~~~~~~~~~~------~~~~~~~Wd~~~~~~~~lla~~~~~~~~-~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~  344 (505)
                      ++++...++..      ...+.|+||++..+++++|++.  .+.. +.++.++..++.+++    +....++++||+|+.
T Consensus       256 a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~tp~Gl~  329 (466)
T 2xfg_A          256 AESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARI--KNDNGKYKEAIERHLDWWTT----GYNGERITYTPKGLA  329 (466)
T ss_dssp             HHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTT----CBTTBCCCBCTTSCB
T ss_pred             HHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHh----ccCCCccccCCcccc
Confidence            99976544321      2346799999999999988763  2222 445556666655543    333347899999999


Q ss_pred             cccCCChHHHHHHHHHHHHHHHhHhhhCCCccccCCCccchHHHHHHHHhcccccccCCCCCcceEeeeCCCCCCCcccc
Q 010632          345 YKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHR  424 (505)
Q Consensus       345 w~~~w~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR  424 (505)
                      |...||+++|++|.+||+++|++++.       |+  ..+.++|+++|++|||||||+|  ++|||||||+|+|++||||
T Consensus       330 ~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR  398 (466)
T 2xfg_A          330 WLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHR  398 (466)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCH
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCc
Confidence            99999999999999999999987542       32  2346899999999999999999  9999999999999999999


Q ss_pred             CCCCCCCCCCCCccccCCCcccccCCCCCCCCcccccccCCCCCCCcccCcCccccCcccccCchHHHHHHHHhhcccC
Q 010632          425 GSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSKTT  503 (505)
Q Consensus       425 ~s~~~~~~~~p~~~~c~~g~~~~~~~~pn~~~l~GalvGGPn~~d~y~D~~~~y~~nEvaId~NA~lv~~la~l~~~~~  503 (505)
                      +|+||...             +.+.+.|||++|+|+||||||..|+|+|+|.+|++|||||||||+||++||+|...-+
T Consensus       399 ~ss~~~~~-------------~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g  464 (466)
T 2xfg_A          399 TAHGSWAD-------------SQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYG  464 (466)
T ss_dssp             HHHTCSSS-------------CTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             hhccCccc-------------cccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcC
Confidence            99986431             2356789999999999999999999999999999999999999999999999987643
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 505
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-174
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-164
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-164
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-151
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-122
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-121
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  496 bits (1279), Expect = e-174
 Identities = 186/471 (39%), Positives = 265/471 (56%), Gaps = 41/471 (8%)

Query: 40  DYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGL 99
           +Y++AL KS+ F+E QRSG+LP N +++WRG+SGL+DG+   +DL GG+YDAGD+VKFG 
Sbjct: 5   NYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGF 64

Query: 100 PMAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNM 157
           PMAFT T+L+W  IE          +   K  +RW  DY +KA   +P  LYVQVGD + 
Sbjct: 65  PMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKA-HPSPNVLYVQVGDGDA 123

Query: 158 DHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAM 217
           DH  W   E M   R  +KV    PGSDVAAETAAA+AA+S+VF D DP+Y+  L++ A 
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 218 KVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGH 277
           +++ FAD YRG YSD + +    FY S+SGY DEL+WGA WL++A+ + SYLA  +    
Sbjct: 184 QLYTFADTYRGVYSDCVPA--GAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD 241

Query: 278 ILGADDDD------YSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGS 331
            L  +         ++ +WDDK  GT VLL+K          Q Y   ++ ++     G 
Sbjct: 242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAK------ETGKQKYIDDANRWLDYWTVGV 295

Query: 332 SSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIAL 391
           +  +  Y+ GG+    +   L+Y   TAF+ L YAK +             V+ +     
Sbjct: 296 NGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVI----------DDPVRKQRYHDF 345

Query: 392 AKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRS 451
           A +Q++Y LGDNP   SY+VGFG   P++ HHR +                    + S +
Sbjct: 346 AVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH-------------GSWTDSIASPA 392

Query: 452 PNPNVLTGAILGGPDNR-DNFADDRNNYQQSEPATYINAPFVGAVAFFSSK 501
            N +VL GA++GGP +  D + DDR +Y  +E AT  NA F  A+A    +
Sbjct: 393 ENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query505
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 92.54
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.52
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 92.13
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 91.1
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 84.92
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 81.78
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=1.5e-105  Score=853.79  Aligned_cols=434  Identities=42%  Similarity=0.738  Sum_probs=378.3

Q ss_pred             hhhHHHHHHHHHHhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchHHHHHHHHHHHHHhhh
Q 010632           38 FQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGS  117 (505)
Q Consensus        38 ~~~Y~~~l~~sl~ff~~QR~G~l~~~~~~~w~~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~~  117 (505)
                      +.+|.++|+++|+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++||+
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            34899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc--hhhHHHHHHHHHHHHHHHHHcccCCCCceEEEcCCCCCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHHHHHH
Q 010632          118 SM--QNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALA  195 (505)
Q Consensus       118 ~~--~~~~pdiLde~kwg~D~llkmq~~~~g~~y~~vg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~aAalA  195 (505)
                      .|  .|++||||||||||+|||+|| |+++|.||+|||++..||..|++|+.++.+|+.+.+...+|+|++++++|||||
T Consensus        83 ~~~~~~~~pdlLdE~~wglD~llkm-q~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA  161 (460)
T d1tf4a1          83 GYIRSGQMPYLKDNLRWVNDYFIKA-HPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (460)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHT-CSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             hhhcCCCcHHHHHHHHHHHHHHHhc-ccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHH
Confidence            98  489999999999999999999 889999999999999999999999999889999988888899999999999999


Q ss_pred             HHhhhcccCChHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHcCChhHHHHHHHc
Q 010632          196 AASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSN  275 (505)
Q Consensus       196 ~as~vf~~~D~~~A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~~g~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~~~~~  275 (505)
                      +|||||+++||+||++||++||++|+||++||+.|.+..+. ...+|.+ +++.||++|||+|||++|||++|+++++..
T Consensus       162 ~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~-~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~  239 (460)
T d1tf4a1         162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPA-GAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYE  239 (460)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTT-HHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998776432 3345666 889999999999999999999999999987


Q ss_pred             ccccCC------CCCCCccCccchhhHHHHhhcccccccchHHHHHHHHHHHHHHHHhCCCCCCCcccccCCccccccCC
Q 010632          276 GHILGA------DDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQYTAGGLFYKASE  349 (505)
Q Consensus       276 ~~~~~~------~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w  349 (505)
                      ...+..      ....+.++|+++..+..+++++..  .    +..+++.++.+++.+........++++++++.|...|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W  313 (460)
T d1tf4a1         240 YDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--G----KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTW  313 (460)
T ss_dssp             GGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--C----CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSS
T ss_pred             hhhcccccccccccccccccccchhHHHHHHHHHHh--h----hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecCCC
Confidence            543321      123456899999888877775421  1    2344555666665554443334667789999888899


Q ss_pred             ChHHHHHHHHHHHHHHHhHhhhCCCccccCCCccchHHHHHHHHhcccccccCCCCCcceEeeeCCCCCCCccccCCCCC
Q 010632          350 SNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLP  429 (505)
Q Consensus       350 ~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~  429 (505)
                      |++++++|.+++++++.+.+.+          ..++++|+++|++|||||||+||+++|||||+|+|+|++||||.++|+
T Consensus       314 Gsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~  383 (460)
T d1tf4a1         314 GALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS  383 (460)
T ss_dssp             SHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC
T ss_pred             chHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCC
Confidence            9999999999999888765421          234578999999999999999999999999999999999999998875


Q ss_pred             CCCCCCCccccCCCcccccCCCCCCCCcccccccCCC-CCCCcccCcCccccCcccccCchHHHHHHHHhhcccC
Q 010632          430 SIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPD-NRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSKTT  503 (505)
Q Consensus       430 ~~~~~p~~~~c~~g~~~~~~~~pn~~~l~GalvGGPn-~~d~y~D~~~~y~~nEvaId~NA~lv~~la~l~~~~~  503 (505)
                      ..             ++...+.|||++|+|+|||||| ..+||+|++++|++|||||||||+||++||+|+++.+
T Consensus       384 ~~-------------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~  445 (460)
T d1tf4a1         384 WT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYG  445 (460)
T ss_dssp             SS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHC
T ss_pred             Cc-------------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence            42             1345678999999999999999 5799999999999999999999999999999988744
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure