Citrus Sinensis ID: 010654
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 505 | 2.2.26 [Sep-21-2011] | |||||||
| Q59536 | 690 | Protease 2 OS=Moraxella l | N/A | no | 0.958 | 0.701 | 0.423 | 1e-113 | |
| P24555 | 686 | Protease 2 OS=Escherichia | N/A | no | 0.956 | 0.704 | 0.433 | 1e-105 | |
| P55656 | 705 | Uncharacterized peptidase | no | no | 0.944 | 0.676 | 0.326 | 1e-59 | |
| P55627 | 754 | Uncharacterized peptidase | no | no | 0.948 | 0.635 | 0.317 | 3e-57 | |
| P27028 | 705 | Prolyl endopeptidase OS=F | N/A | no | 0.899 | 0.643 | 0.298 | 1e-52 | |
| Q06903 | 690 | Prolyl endopeptidase OS=A | no | no | 0.908 | 0.665 | 0.299 | 2e-48 | |
| P27195 | 705 | Prolyl endopeptidase OS=E | N/A | no | 0.6 | 0.429 | 0.361 | 2e-48 | |
| Q32N48 | 707 | Prolyl endopeptidase-like | N/A | no | 0.829 | 0.592 | 0.301 | 9e-48 | |
| Q5ZKL5 | 732 | Prolyl endopeptidase-like | yes | no | 0.827 | 0.571 | 0.305 | 1e-47 | |
| O70196 | 710 | Prolyl endopeptidase OS=R | yes | no | 0.590 | 0.419 | 0.334 | 7e-41 |
| >sp|Q59536|PTRB_MORLA Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/498 (42%), Positives = 307/498 (61%), Gaps = 14/498 (2%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
+DE RP + W H+L +D +D ++ EKDD ++L + S+S KF+F+ S SK T +
Sbjct: 195 VDEHQRPCQLWRHRLGSDVESDELIFEEKDDTFTLFISKSQSGKFIFVYSSSKTTSEIHM 254
Query: 61 LDVSKP-EELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
+D P L+++ R G+ H + I L N +LL CP+++ S ++
Sbjct: 255 IDTDSPLSPLQLVDERRDGILYDVEHWEDDLLILTNEGAL-NFQLLRCPLNDLSSKVNVV 313
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
+ E LQ++ F D L + RE GL +I + + + + +P+Y++
Sbjct: 314 EYNEERYLQEMYPFRDKLLIAGRENGLTQIWVVHDGEL----------QQISWDEPLYTV 363
Query: 180 DP-SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWA 238
SE + + + Y SL TP + + ++ G ++ V G +D + + E+ WA
Sbjct: 364 AVLSEQSYDTNEVLIQYESLLTPKTTFGLNLQTGEKQCLQVAPVSGEYDRSQFRQEQLWA 423
Query: 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIA 298
+ G ++P+ VY + + +G PL+LYGYGSY +DP F+ RL LL++G +F A
Sbjct: 424 TGRSGVKVPMTAVYLEGALD-NGPAPLILYGYGSYGSNSDPRFDPYRLPLLEKGIVFVTA 482
Query: 299 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358
Q+RGG E+GR WYE+GK K+NTFTDFIA A++LI Y + K+ G SAGGLL+GA
Sbjct: 483 QVRGGSEMGRGWYEDGKMQNKRNTFTDFIAAAKHLIDQNYTSPTKMAARGGSAGGLLVGA 542
Query: 359 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDN 418
V NM +LFK V AVPFVDV+TTMLD +IPLTT EW+EWGDP K+E YFYMKSYSP DN
Sbjct: 543 VANMAGELFKVIVPAVPFVDVVTTMLDTSIPLTTLEWDEWGDPRKQEDYFYMKSYSPYDN 602
Query: 419 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 478
V+A++YPH+ +T G+NDPRV Y EPAK+VA+LR +KTD+N L+ K +GAGHF KSGRF
Sbjct: 603 VEAKDYPHMYITTGINDPRVGYFEPAKWVARLRAVKTDNNTLVMKTNMGAGHFGKSGRFN 662
Query: 479 RLREAAFTYTFLMRALSM 496
L+EAA +Y F++ L +
Sbjct: 663 HLKEAAESYAFILDKLGV 680
|
Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Moraxella lacunata (taxid: 477) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 8EC: 3 |
| >sp|P24555|PTRB_ECOLI Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2 | Back alignment and function description |
|---|
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/507 (43%), Positives = 300/507 (59%), Gaps = 24/507 (4%)
Query: 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 64
L P + W H + S D +Y EKDD Y + L + SK ++ I S T V LD
Sbjct: 196 LLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAE 255
Query: 65 KPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE 123
+ E V PR + + H + F++ R + N L + + + LIP RE
Sbjct: 256 MADAEPFVFLPRRKDHEYSLDHYQHRFYL-RSNRHGKNFGLYRTRMRDEQQWEELIPPRE 314
Query: 124 SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY----SI 179
++ L+ LF D L V ER+ GL L + + + G + F DP Y +
Sbjct: 315 NIMLEGFTLFTDWLVVEERQRGLTS-----LRQINRKTREVIG---IAFDDPAYVTWIAY 366
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG-ISVLKKIETVLGGFDTNNYFTERKWA 238
+P LR+ YSS+ TP ++++ DMD G VLK+ E + GF NY +E W
Sbjct: 367 NPEPETAR---LRYGYSSMTTPDTLFELDMDTGERRVLKQTE--VPGFYAANYRSEHLWI 421
Query: 239 SASDGTQIPICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAI 297
A DG ++P+ +VY RK+ K G +PLL+YGYGSY D F+ SRLSLLDRGF++AI
Sbjct: 422 VARDGVEVPVSLVYHRKHFRK--GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAI 479
Query: 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357
+RGGGELG+QWYE+GKFLKKKNTF D++ + L+K Y + G SAGG+L+G
Sbjct: 480 VHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMG 539
Query: 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417
+N RP+LF +A VPFVDV+TTMLD +IPLTT E+EEWG+P ++Y YMKSYSP D
Sbjct: 540 VAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYD 599
Query: 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477
NV AQ YPH+LVT GL+D +V Y EPAK+VAKLRE+KTDD++LL ++ +GH KSGRF
Sbjct: 600 NVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRF 659
Query: 478 ERLREAAFTYTFLMR-ALSMLPSVGSE 503
+ A Y FL+ A LP+ ++
Sbjct: 660 KSYEGVAMEYAFLVALAQGTLPATPAD 686
|
Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 8 EC: 3 |
| >sp|P55656|Y4SO_RHISN Uncharacterized peptidase y4sO OS=Rhizobium sp. (strain NGR234) GN=NGR_a01580 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 261/506 (51%), Gaps = 29/506 (5%)
Query: 14 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIA------SESKITRF---VFYLDVS 64
+L+ + ++ E ++ +L ++ S S +LFI S+I R V+ L
Sbjct: 203 RLDVETGRSEVVFEEVNERLALVVRRSGSGAYLFIDVIITSDMSSRIQRAAAEVWCLPAE 262
Query: 65 KPEEL-RVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET--TVLIPH 121
+P ++ R + R +G + A H GN F R +D N L+ +D+TS + ++PH
Sbjct: 263 RPTDMWRRILARELGHEIYAEHWGNEFLF-RVNDTGPNLRLVRTAIDDTSPSRWQEVVPH 321
Query: 122 RESVKLQDIQLFIDHLAVYEREGGLQKITTY-RLPAVGEPLKSLQGGKSVEF-IDPVYSI 179
R + L++I + +H+ V EREG ++ + R VG + ++ +V + S
Sbjct: 322 RAGITLEEIHVLEEHVIVLEREGIQPRLVAHHRNGRVGPSIVPVEHSCTVTVGLSAGGSY 381
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS-VLKKIETVLGGFDTNNYFTERKWA 238
+ + L + S TP +D+ S VL + T++ GF+ Y A
Sbjct: 382 SCARHPYRVSALTYKICSFVTPDIFIQHDLLTDKSKVLYR--TLVSGFEPELYEARVVMA 439
Query: 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF------NSSRLSLLDRG 292
A DG ++PI IV R++ + DG P+LL YG Y + PAF ++RLSLLDRG
Sbjct: 440 KAEDGVEVPISIVARRDRGE-DG--PVLLNVYGCYGAQSLPAFFGWPSSMTARLSLLDRG 496
Query: 293 FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAG 352
F I +RGGGELGR W+E +K+ T TD IA AE L+++ + +++ + IEGRSAG
Sbjct: 497 VAFGIVHVRGGGELGRAWHEAATRDQKRLTHTDLIAAAECLVEHRFASRDGIVIEGRSAG 556
Query: 353 GLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKS 412
G + A +RPDLF+A +A VP D++ T LD T+P E E+GDP Y Y++S
Sbjct: 557 GGTVLAAAVLRPDLFRAVLAEVPLADIIDTELDFTLPYALRETAEYGDPHLANDYQYLRS 616
Query: 413 YSPVDNVKA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD-DNILLFKCELGAGH 470
Y P N+ + YP + A L+D +V+Y +PA++VA+ R D D L+F+ + GH
Sbjct: 617 YDPYYNLTPDRRYPPTYIDAALHDSQVLYYQPARYVAQRRSKAVDRDPDLIFRTRMIGGH 676
Query: 471 FSKSGRFERLREAAFTYTFLMRALSM 496
S EAAF +++ L
Sbjct: 677 MGVSHGPGVAEEAAFRMAWILHRLGQ 702
|
Rhizobium sp. (strain NGR234) (taxid: 394) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|P55627|Y4QF_RHISN Uncharacterized peptidase y4qF OS=Rhizobium sp. (strain NGR234) GN=NGR_a01920 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 259/519 (49%), Gaps = 40/519 (7%)
Query: 6 RPDKAWLH---KLEADQSNDICLYHEKDDIYSLGLQASESKKFLF--IASESKITRFV-- 58
RPD+ H +L + N ++ E ++ ++ ++ S+S +LF + + S ++ +V
Sbjct: 223 RPDRRQHHQIVRLNVGRGNSEVVFEEANERLAVLVRRSQSGAWLFLDVLTTSDMSSYVQR 282
Query: 59 -----FYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112
+ L +P + R + R +G A H + F R D L++ P+D+
Sbjct: 283 GAAEVWCLPADEPGGQWRRIVMRELGHQIYAEHWYDRFLF-RVDDAGPYWRLVSAPIDDP 341
Query: 113 SETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQK-ITTYRLPAVG------EPLKS 163
S + ++PHR V + +I + HL + EREG + I+ R VG EP +
Sbjct: 342 SPSRWEEVVPHRAGVTIDEIHVLEQHLVLLEREGLRPRLISRNRSGRVGAVIVPDEPSCT 401
Query: 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVL 223
++ G S YS + F S L + SS TP + ++D SV+ E +
Sbjct: 402 IRVGLSA---GGCYSA--ARHPFRSSKLTYSVSSFVTPDTFIEHDFANDRSVVL-CEARV 455
Query: 224 GGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-- 281
G+D Y A A DG Q+PI +V R++ P+LL YG Y I P+F
Sbjct: 456 PGYDATQYLATVVMAEAEDGVQVPISLVARRDRTS---PGPVLLSVYGCYGIPRLPSFLA 512
Query: 282 ----NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337
++RLSLLDR F I +RGGGELGR W++ +K+ T TD I+ E LI+
Sbjct: 513 WPSSMTARLSLLDREVAFGIVHVRGGGELGRPWHDAATRDQKRITHTDLISATEGLIERG 572
Query: 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 397
+ T++ + IEG+S GG + A RP+LF+A VA VP D++ T LD T+P T E E
Sbjct: 573 FATRDGVVIEGKSGGGGTVLATAVFRPNLFRAVVAEVPLADIIDTQLDSTMPYTLKETAE 632
Query: 398 WGDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456
+GDP Y Y++SY P N+ + + P V A L+D +V+Y +PA++VA+ R TD
Sbjct: 633 YGDPQDAYEYRYLRSYDPYYNLSPERSLPPTYVDAALDDGQVIYYQPARYVAQRRSCATD 692
Query: 457 -DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494
D L+F+ + GH S +AAF +++ L
Sbjct: 693 RDPDLVFRIRMVGGHSGPSHGPGIAEQAAFRMAWVLDQL 731
|
Rhizobium sp. (strain NGR234) (taxid: 394) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|P27028|PPCE_FLAME Prolyl endopeptidase OS=Flavobacterium meningosepticum GN=f1pep1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 253/510 (49%), Gaps = 56/510 (10%)
Query: 9 KAWLHKLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 67
K + HKL QS D + + +K +G ++ +++L +++ + Y+ +
Sbjct: 226 KVYFHKLGTKQSQDELIIGGDKFPRRYIGAYVTDDQRYLVVSAANATNGNELYI-----K 280
Query: 68 ELRVLT---PRVVGVDT---AASHRGNHFFITRRSDELFNSELLACPVDNTSETT---VL 118
+L+ T P + G D+ A G+ ++ D N L+ + N T V+
Sbjct: 281 DLKNKTDFIPIITGFDSNVNVADTDGDTLYLFTDKDAP-NKRLVKTTIQNPKAETWKDVI 339
Query: 119 IPHRESVKLQD---------IQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS 169
E +++ ++ ID + Y++ G L + +LP G S GG+
Sbjct: 340 AETSEPLEINTGGGYFFATYMKDAIDQVKQYDKNGKL--VRAIKLPGSGNA--SGFGGEK 395
Query: 170 VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTN 229
E + L + +++ TPP+++ Y++ G S + + V F+
Sbjct: 396 TE-----------------KDLYYSFTNYITPPTIFKYNVTTGNSEVYQKPKVK--FNPE 436
Query: 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL 289
NY +E+ + ++SDGT+IP+ I Y+K L K DG +P +LY YG + I PAF+ +
Sbjct: 437 NYVSEQVFYTSSDGTKIPMMISYKKGLKK-DGKNPTILYSYGGFNISLQPAFSVVNAIWM 495
Query: 290 DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGR 349
+ G I+A+ IRGGGE G++W++ G ++KKN F DFIA EYL KN Y +KE + + GR
Sbjct: 496 ENGGIYAVPNIRGGGEYGKKWHDAGTKMQKKNVFNDFIAAGEYLQKNGYTSKEYMALSGR 555
Query: 350 SAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE-EWGDPW-KEEFY 407
S GGLL+GA + MRPDL K A V +D ML A W ++G +E +
Sbjct: 556 SNGGLLVGATMTMRPDLAKVAFPGVGVLD----MLRYNKFTAGAGWAYDYGTAEDSKEMF 611
Query: 408 FYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCEL 466
Y+KSYSPV NVKA YP +V +D RV+ + KF ++L+ ++ N +L + E
Sbjct: 612 EYLKSYSPVHNVKAGTCYPSTMVITSDHDDRVVPAHSFKFGSELQAKQSCKNPILIRIET 671
Query: 467 GAGHFSKSGRFERLREAAFTYTFLMRALSM 496
AGH + + + E A +F + + +
Sbjct: 672 NAGHGAGRSTEQVVAENADLLSFALYEMGI 701
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Flavobacterium meningosepticum (taxid: 238) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q06903|PPCE_AERHY Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 SV=2 | Back alignment and function description |
|---|
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 235/497 (47%), Gaps = 38/497 (7%)
Query: 9 KAWLHKLEADQSNDICLYHE--KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 66
K + H+L Q D ++ +G +E ++L I++ + Y+
Sbjct: 206 KLYFHRLGTAQEEDRLVFGAIPAQRHRYVGATVTEDDRYLLISAADSTSGNRLYVKDLTR 265
Query: 67 EELRVLTPRVVGVDTAAS-----HRGNHFFITRRSDELFNSELLACPVDNTS--ETTVLI 119
E +LT V D AA ++G+ ++ D N L+ DN + LI
Sbjct: 266 EGAPLLT---VQGDLAADVSLVDNKGSRLYLLTNRDAP-NRRLVTVEADNPGPEQWRDLI 321
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID--PVY 177
P R+ V L V+ GG Y + A + GK V + +
Sbjct: 322 PERQQV-----------LTVHS--GGGYLFAEYMVDATARVEQFDHDGKRVREVGLPGLG 368
Query: 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKW 237
S+ L F + + PP++Y ++ + G L + F +Y +E+++
Sbjct: 369 SVSGFNGKQDDPALYFGFENYAQPPTLYKFEPNSGAISLYRASAAP--FKPEDYVSEQRF 426
Query: 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAI 297
+ DGT++P+ I YRK L KLDGS+P +LYGYG +++ P+F+ S + LD G ++A+
Sbjct: 427 YRSKDGTRVPLIISYRKGL-KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAV 485
Query: 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357
A +RGGGE G+ W+ G + K+N F DFIA AEYL Y ++L I G S GGLL+G
Sbjct: 486 ANLRGGGEYGQAWHLAGTRMNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVG 545
Query: 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYF-YMKSYSP 415
AV+ RPDL + A AV +D ML A W ++G E F Y+K YSP
Sbjct: 546 AVMTQRPDLMRVACQAVGVLD----MLRYHTFTAGAGWAYDYGTSADSEAMFDYLKGYSP 601
Query: 416 VDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474
+ +V+A +YP LVT +D RV+ + KF A L+ + L + E AGH + +
Sbjct: 602 LHSVRAGVSYPSTLVTTADHDDRVVPAHSFKFAATLQADDAGPHPQLIRIETNAGHGAGT 661
Query: 475 GRFERLREAAFTYTFLM 491
+ + ++A Y F +
Sbjct: 662 PVAKLIEQSADIYAFTL 678
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Aeromonas hydrophila (taxid: 644) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P27195|PPCF_ELIMR Prolyl endopeptidase OS=Elizabethkingia miricola PE=1 SV=1 | Back alignment and function description |
|---|
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 177/313 (56%), Gaps = 10/313 (3%)
Query: 187 SSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQI 246
+ + L + +++ TPP+++ + +D G S + + V F+ NY +E+ + +++DGT+I
Sbjct: 396 TEKELYYSFTNYITPPTIFKFSIDSGKSEVYQKPKVK--FNPENYVSEQVFYTSADGTKI 453
Query: 247 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL 306
P+ I +K L K DG +P +LY YG + I PAF+ ++ G I+A+ IRGGGE
Sbjct: 454 PMMISNKKGLKK-DGKNPTILYSYGGFNISLQPAFSVVNAIWMENGGIYAVPNIRGGGEY 512
Query: 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL 366
G++W++ G +KKN F DFIA EYL KN Y +K+ + + GRS GGLL+GA + MRPDL
Sbjct: 513 GKKWHDAGTKQQKKNVFNDFIAAGEYLQKNGYTSKDYMALSGRSNGGLLVGATMTMRPDL 572
Query: 367 FKAAVAAVPFVDVLTTMLDPTIPLTTAEWE-EWGDPW-KEEFYFYMKSYSPVDNVKAQN- 423
K A V +D ML A W ++G +E + Y+KSYSPV NVKA
Sbjct: 573 AKVAFPGVGVLD----MLRYNKFTAGAGWAYDYGTAEDSKEMFEYLKSYSPVHNVKAGTC 628
Query: 424 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREA 483
YP +V +D RV+ + KF A+L+ + N +L + E AGH + + + E
Sbjct: 629 YPSTMVITSDHDDRVVPAHSFKFGAELQAKQACKNPVLIRIETNAGHGAGRSTEQVVMEN 688
Query: 484 AFTYTFLMRALSM 496
A +F + + +
Sbjct: 689 ADLLSFALYEMGI 701
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Elizabethkingia miricola (taxid: 172045) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q32N48|PPCEL_XENLA Prolyl endopeptidase-like OS=Xenopus laevis GN=prepl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 213/438 (48%), Gaps = 19/438 (4%)
Query: 25 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDTAA 83
+Y E D + + L + K+F+ I S SK T V +D P E VL R+ GV
Sbjct: 221 VYTENDPRFFVDLYCTRDKRFITINSNSKSTSEVRLIDNRCPFEPPVLVQKRIAGVIYYI 280
Query: 84 SHRGNHFFITRRSDELFNSELLACPVDN-TSETTVLIPHRESVKLQDIQLFIDHLAVYER 142
H ++ RR E ++L V + + +E KL D+++ DH ++
Sbjct: 281 EHSNGCLYMLRRHGEAAEYKILKAAVSSGMKHWEPVYEVQERTKLVDMEMLKDHCLLF-- 338
Query: 143 EGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202
L+ L +G P ++ + +D ++ + + + F SS PP
Sbjct: 339 ---LKNHNQLSLEVIGLPSGAVLQSIKLPAWACALELD-HQAEYGAGTVGFSLSSPVHPP 394
Query: 203 SVYDYDMDMGISVLKK---IETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKL 259
++Y S+ KK ++T + + T R A + DGT +P+ ++Y+ + ++
Sbjct: 395 VHFEY------SLRKKQLSVDTNHSSDGIHQFHTLRLEAKSKDGTSVPLTLLYKDSEKQM 448
Query: 260 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319
PLL++ YG+Y + + +F + L++ G++ A +RGGGELG W+ G KK
Sbjct: 449 R-QRPLLIHVYGAYGMDLNMSFKVEKRMLVEEGWLLAYCHVRGGGELGCNWHSEGVLDKK 507
Query: 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 379
N D +C +L Y +E SAGG+L GA+ N P LF+A V PF+DV
Sbjct: 508 LNGLEDLGSCISHLHGLGYSQPHYSAVEAASAGGVLAGALCNSAPRLFRAVVLEAPFLDV 567
Query: 380 LTTMLDPTIPLTTAEWEEWGDPWKEEFYF-YMKSYSPVDNVKAQNYPHILVTAGLNDPRV 438
L TM++ ++PLT E EEWG+P +E Y Y+KSY P N+ QNYP + +TA ND RV
Sbjct: 568 LNTMMNVSLPLTIEEQEEWGNPLSDEKYHRYIKSYCPYQNITPQNYPCVRITAYENDQRV 627
Query: 439 MYSEPAKFVAKLREMKTD 456
++ +LR+ D
Sbjct: 628 PIQGLLGYITRLRKAARD 645
|
Probable serine peptidase whose precise substrate specificity remains unclear. Xenopus laevis (taxid: 8355) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|Q5ZKL5|PPCEL_CHICK Prolyl endopeptidase-like OS=Gallus gallus GN=PREPL PE=2 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 212/439 (48%), Gaps = 21/439 (4%)
Query: 25 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDTAA 83
+Y E+D + + + ++ ++FL I S SK T V+ +D P +L VL R GV
Sbjct: 258 VYTEQDARFFVDIYCTKDRRFLTINSNSKTTSEVWLIDCRHPFKLPVLVQARTKGVIYHV 317
Query: 84 SHRGNHFFITRRSDELFNSELLACPVDNT--SETTVLIPHRESVKLQDIQLFIDHLAVYE 141
HR N +I E +L+ V +T ++ E KL D+++F DH ++
Sbjct: 318 EHRNNELYILTSYGEPAEYKLMKASVASTGMENWQLVYALEEKTKLIDLEMFRDHCIMFL 377
Query: 142 REGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID---PSESVFSSRILRFHYSSL 198
++ G + + V ++S+Q P ++ S +S F +S
Sbjct: 378 QKAGYLYLNV--IAFVSHSVQSIQL--------PTWACAFELESHPEHASSTCYFQLTSP 427
Query: 199 RTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVK 258
PP + Y + + E V N T R A + D T +PI + + N +
Sbjct: 428 VHPPRRFAYSFKENNLIEQAAEEVPIIM---NCHTTRLLAKSKDETLVPITVFHNVNSKE 484
Query: 259 LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318
L PLL++ YG+Y I + +F +L L++ G+I A +RGGGELG +W+++G
Sbjct: 485 LH-RKPLLVHVYGAYGIDLNMSFKEEKLMLIEEGWILAYCHVRGGGELGLRWHKDGCQQN 543
Query: 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378
K D AC L + + + + SAGG+L GA+ N P+L +A V PFVD
Sbjct: 544 KLKGLHDLKACIMLLHELGFSQPKYTALTAVSAGGVLAGAICNSDPELIRAVVLQAPFVD 603
Query: 379 VLTTMLDPTIPLTTAEWEEWGDPWKEEFYF-YMKSYSPVDNVKAQNYPHILVTAGLNDPR 437
VL TM+ +PL+ E EEWG+P +E Y+K+Y P N+K Q YP + +TA ND R
Sbjct: 604 VLNTMMKTHLPLSIEEQEEWGNPLADEKCMKYIKNYCPYHNIKPQCYPSVFITAYENDQR 663
Query: 438 VMYSEPAKFVAKLREMKTD 456
V + ++V KLR+ D
Sbjct: 664 VPLTGILRYVQKLRKATLD 682
|
Probable serine peptidase whose precise substrate specificity remains unclear. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|O70196|PPCE_RAT Prolyl endopeptidase OS=Rattus norvegicus GN=Prep PE=1 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 166/317 (52%), Gaps = 19/317 (5%)
Query: 193 FHYSSLRTPPSVYDYDM---DMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPIC 249
+ ++S +P +Y D+ ++ V + E + G D ++Y T + + + DGT+IP+
Sbjct: 396 YQFTSFLSPGVIYHCDLTREELEPRVFR--EVTVKGIDASDYQTIQVFYPSKDGTKIPMF 453
Query: 250 IVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGR 308
IV++K +KLDGS P LYGYG + I P ++ SRL + G + A+A IRGGGE G
Sbjct: 454 IVHKKG-IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGE 512
Query: 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 368
W++ G K+N F DF AEYLIK Y T ++L I G S GGLL+ A N RPDLF
Sbjct: 513 TWHKGGILANKQNCFDDFQCAAEYLIKEGYTTSKRLTINGGSNGGLLVAACANQRPDLFG 572
Query: 369 AAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ-----N 423
+A V +D+L + A ++G ++ + ++ YSP+ NVK
Sbjct: 573 CVIAQVGVMDMLKFH---KFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNVKLPEADDIQ 629
Query: 424 YPHILVTAGLNDPRVMYSEPAKFVAKLREM----KTDDNILLFKCELGAGHFSKSGRFER 479
YP +L+ +D RV+ KF+A L+ + + N LL + AGH +
Sbjct: 630 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGPGKPTAKV 689
Query: 480 LREAAFTYTFLMRALSM 496
+ E + + F+ R L++
Sbjct: 690 IEEVSDMFAFIARCLNI 706
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has high activity on the succinyl- (suc-) peptide-4-methylcoumaryl-7-amide (MCA) substrates suc-Gly-Pro-Leu-Gly-Pro-MCA, suc-Gly-Pro-MCA and suc-Ala-Ala-Ala-MCA. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 505 | ||||||
| 297742722 | 698 | unnamed protein product [Vitis vinifera] | 1.0 | 0.723 | 0.794 | 0.0 | |
| 359484112 | 719 | PREDICTED: protease 2-like isoform 2 [Vi | 1.0 | 0.702 | 0.794 | 0.0 | |
| 297742723 | 755 | unnamed protein product [Vitis vinifera] | 0.992 | 0.663 | 0.796 | 0.0 | |
| 224095196 | 711 | predicted protein [Populus trichocarpa] | 0.994 | 0.706 | 0.777 | 0.0 | |
| 297847380 | 710 | prolyl oligopeptidase family protein [Ar | 0.992 | 0.705 | 0.774 | 0.0 | |
| 18403046 | 710 | oligopeptidase B [Arabidopsis thaliana] | 0.992 | 0.705 | 0.772 | 0.0 | |
| 357117058 | 726 | PREDICTED: protease 2-like, partial [Bra | 0.990 | 0.688 | 0.758 | 0.0 | |
| 242097176 | 710 | hypothetical protein SORBIDRAFT_10g03118 | 0.994 | 0.707 | 0.763 | 0.0 | |
| 449458732 | 757 | PREDICTED: protease 2-like [Cucumis sati | 0.994 | 0.663 | 0.763 | 0.0 | |
| 110349985 | 651 | oligopeptidase B [Triticum aestivum] | 0.994 | 0.771 | 0.751 | 0.0 |
| >gi|297742722|emb|CBI35356.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/506 (79%), Positives = 452/506 (89%), Gaps = 1/506 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDE LRPDK WLHKLE DQS+D CLYHEKD+++S+ L+ASESKKF+F+ SESK TRF+F
Sbjct: 193 MDETLRPDKVWLHKLETDQSSDSCLYHEKDNMFSVDLEASESKKFVFVGSESKTTRFIFN 252
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVSKPE L VLTPR+ G+DT+ASHRGNHFFI RRSDE FNSE+LACP++N SETTVL+
Sbjct: 253 LDVSKPEGGLMVLTPRLDGIDTSASHRGNHFFIKRRSDEFFNSEVLACPLNNISETTVLL 312
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+QDIQLF HL VYERE GL K+T YRLPAVGEPL SLQGG++V+F+DP+YS+
Sbjct: 313 PHRESVKIQDIQLFSGHLVVYERENGLPKVTFYRLPAVGEPLGSLQGGRTVDFLDPIYSV 372
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
DPSES FSS ILRF YSSLRTP SVYDYDM+ G+SVLKKI+TVLG FD + Y TERKWA+
Sbjct: 373 DPSESQFSSSILRFSYSSLRTPDSVYDYDMNTGVSVLKKIQTVLGNFDASKYITERKWAN 432
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
A DGTQIPI IVYRK+LVKLDGSDPLLLYGYGSYEIC + F SRLSLLDRGFIFAIA
Sbjct: 433 AQDGTQIPISIVYRKDLVKLDGSDPLLLYGYGSYEICVEAHFQESRLSLLDRGFIFAIAH 492
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GRQWYENGK LKKKNTFTDFI CAEYLI+ YC+KEKLCIEGRSAGGLLIGAV
Sbjct: 493 IRGGGEMGRQWYENGKLLKKKNTFTDFIVCAEYLIEIKYCSKEKLCIEGRSAGGLLIGAV 552
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLF+AA+A VPFVDVLTTMLDPTIPLTT+EWEEWGDP KEEFYFYMKSYSPVDN+
Sbjct: 553 LNMRPDLFRAAIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNI 612
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KAQNYP+ILVTAGLNDPRV+YSEPAK VAKLR+ KTDDNILLFKCE+ AGH SKSGRFE+
Sbjct: 613 KAQNYPNILVTAGLNDPRVLYSEPAKLVAKLRDTKTDDNILLFKCEMAAGHSSKSGRFEK 672
Query: 480 LREAAFTYTFLMRALSMLPSVGSEQS 505
L+E AFTYTF++++L M P +GS Q+
Sbjct: 673 LQEYAFTYTFIIKSLDMAPPLGSGQN 698
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484112|ref|XP_003633066.1| PREDICTED: protease 2-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/506 (79%), Positives = 452/506 (89%), Gaps = 1/506 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDE LRPDK WLHKLE DQS+D CLYHEKD+++S+ L+ASESKKF+F+ SESK TRF+F
Sbjct: 214 MDETLRPDKVWLHKLETDQSSDSCLYHEKDNMFSVDLEASESKKFVFVGSESKTTRFIFN 273
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVSKPE L VLTPR+ G+DT+ASHRGNHFFI RRSDE FNSE+LACP++N SETTVL+
Sbjct: 274 LDVSKPEGGLMVLTPRLDGIDTSASHRGNHFFIKRRSDEFFNSEVLACPLNNISETTVLL 333
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+QDIQLF HL VYERE GL K+T YRLPAVGEPL SLQGG++V+F+DP+YS+
Sbjct: 334 PHRESVKIQDIQLFSGHLVVYERENGLPKVTFYRLPAVGEPLGSLQGGRTVDFLDPIYSV 393
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
DPSES FSS ILRF YSSLRTP SVYDYDM+ G+SVLKKI+TVLG FD + Y TERKWA+
Sbjct: 394 DPSESQFSSSILRFSYSSLRTPDSVYDYDMNTGVSVLKKIQTVLGNFDASKYITERKWAN 453
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
A DGTQIPI IVYRK+LVKLDGSDPLLLYGYGSYEIC + F SRLSLLDRGFIFAIA
Sbjct: 454 AQDGTQIPISIVYRKDLVKLDGSDPLLLYGYGSYEICVEAHFQESRLSLLDRGFIFAIAH 513
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GRQWYENGK LKKKNTFTDFI CAEYLI+ YC+KEKLCIEGRSAGGLLIGAV
Sbjct: 514 IRGGGEMGRQWYENGKLLKKKNTFTDFIVCAEYLIEIKYCSKEKLCIEGRSAGGLLIGAV 573
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLF+AA+A VPFVDVLTTMLDPTIPLTT+EWEEWGDP KEEFYFYMKSYSPVDN+
Sbjct: 574 LNMRPDLFRAAIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNI 633
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KAQNYP+ILVTAGLNDPRV+YSEPAK VAKLR+ KTDDNILLFKCE+ AGH SKSGRFE+
Sbjct: 634 KAQNYPNILVTAGLNDPRVLYSEPAKLVAKLRDTKTDDNILLFKCEMAAGHSSKSGRFEK 693
Query: 480 LREAAFTYTFLMRALSMLPSVGSEQS 505
L+E AFTYTF++++L M P +GS Q+
Sbjct: 694 LQEYAFTYTFIIKSLDMAPPLGSGQN 719
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742723|emb|CBI35357.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/502 (79%), Positives = 451/502 (89%), Gaps = 1/502 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDE+LRPDK WLHKL DQS+D CLYHEKDD++SLGLQASESK+FLF+ S SK T F+FY
Sbjct: 218 MDEVLRPDKVWLHKLGTDQSSDSCLYHEKDDMFSLGLQASESKQFLFVESGSKNTGFIFY 277
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVSKPE L VLTPR+ G+DT+ASHRGNHF+I RRS+E FNSE+LACP+DN S TVLI
Sbjct: 278 LDVSKPEGGLTVLTPRLDGIDTSASHRGNHFYIKRRSNEYFNSEVLACPLDNVSTMTVLI 337
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+Q IQLF DHL V+ERE GL K+T YRLPAVGEPL SLQGG++++F+DPVY++
Sbjct: 338 PHRESVKIQKIQLFSDHLVVHERENGLPKVTVYRLPAVGEPLTSLQGGQTIDFLDPVYTV 397
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
DPSES FSS ILRF YSSLRTP SVYDYDM GISVLK IETVLG FD + Y TERKWA+
Sbjct: 398 DPSESQFSSSILRFSYSSLRTPRSVYDYDMRTGISVLKNIETVLGDFDASKYITERKWAN 457
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQIP+ IVYRK+LVKLDGSDPLLLYGYGSYEIC DP+F +SRLSLLDRGFIFAIA
Sbjct: 458 ASDGTQIPLSIVYRKDLVKLDGSDPLLLYGYGSYEICIDPSFKASRLSLLDRGFIFAIAH 517
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GRQWYENGK LKK+NTFTDFIACAEYLI+ +C+KEKLCI+G SAGGLLIGAV
Sbjct: 518 IRGGGEMGRQWYENGKLLKKRNTFTDFIACAEYLIEMKFCSKEKLCIQGGSAGGLLIGAV 577
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLFKAAV VPFVDV+TTMLDP+IPLTT+EWEEWGDP KEEFYFYMKSYSPVDN+
Sbjct: 578 LNMRPDLFKAAVTRVPFVDVVTTMLDPSIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNI 637
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KAQNYP ILVTAGLNDPRVMYSEPAKFVAKLR+MK DDN+LLFKCELGAGHFSKSGRFE+
Sbjct: 638 KAQNYPKILVTAGLNDPRVMYSEPAKFVAKLRDMKMDDNVLLFKCELGAGHFSKSGRFEK 697
Query: 480 LREAAFTYTFLMRALSMLPSVG 501
L+E AF TF+++AL+M+P++G
Sbjct: 698 LKEEAFVDTFILKALNMVPTLG 719
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224095196|ref|XP_002310359.1| predicted protein [Populus trichocarpa] gi|222853262|gb|EEE90809.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/503 (77%), Positives = 443/503 (88%), Gaps = 1/503 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDEILRPDK WLHKL DQS+DICLYHEKDD +S+GLQ SES+KFLF+ SESKIT F+F+
Sbjct: 207 MDEILRPDKVWLHKLGTDQSSDICLYHEKDDTFSIGLQKSESQKFLFVGSESKITSFIFF 266
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
+D SKPE+ L+VLTPRVVG+D ASHRGNHFFI RRS+E FNSEL+ACPVD+ S TTVLI
Sbjct: 267 IDASKPEDGLKVLTPRVVGIDNRASHRGNHFFIIRRSEEFFNSELVACPVDDVSVTTVLI 326
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRE +K+QD LF +HLAVYERE GL K+T YRLPAV EPL SL+ G++++FIDPVY++
Sbjct: 327 PHRERIKIQDTHLFANHLAVYERENGLPKVTVYRLPAVDEPLTSLEDGRAIDFIDPVYTV 386
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
DP+ S F+S +LRF YSSLRTP SVYDYDM+ G SV+KKI TVLGGFD + YFTERKWA+
Sbjct: 387 DPAGSEFNSSVLRFSYSSLRTPNSVYDYDMNTGTSVVKKIVTVLGGFDASEYFTERKWAT 446
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQ+P+ IVYRKNLV LDGSDPLLLYGYGSYE+C DP F +SRLS+LDRGFIFAIA
Sbjct: 447 ASDGTQVPMSIVYRKNLVNLDGSDPLLLYGYGSYEVCIDPWFKASRLSILDRGFIFAIAH 506
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GRQWYENGK LKKKNTFTDFIACAEYLI+ YC+KEKLCIEGRSAGGLL+G+V
Sbjct: 507 IRGGGEMGRQWYENGKCLKKKNTFTDFIACAEYLIEQRYCSKEKLCIEGRSAGGLLMGSV 566
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLFK A A VPFVD LTTMLDPTIPLTT+EWEEWGDP KEEFY YMKSYSPVDNV
Sbjct: 567 LNMRPDLFKVAFAGVPFVDALTTMLDPTIPLTTSEWEEWGDPRKEEFYHYMKSYSPVDNV 626
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KAQNYPHILVTAGL+DPRVMYSEPAKFVAKLRE KTD+NILL KCE GAGH SKSGRFE+
Sbjct: 627 KAQNYPHILVTAGLHDPRVMYSEPAKFVAKLRETKTDNNILLLKCEFGAGHSSKSGRFEK 686
Query: 480 LREAAFTYTFLMRALSMLPSVGS 502
L+E AF Y F+++AL M+P + S
Sbjct: 687 LQEQAFIYAFILKALDMIPELSS 709
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297847380|ref|XP_002891571.1| prolyl oligopeptidase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337413|gb|EFH67830.1| prolyl oligopeptidase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/502 (77%), Positives = 447/502 (89%), Gaps = 1/502 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDEILRPDK WLHKL +Q +D+CLYHEKDD++SL L ASES K+LF+ASESK TRFVF
Sbjct: 209 MDEILRPDKVWLHKLGTEQGSDVCLYHEKDDMFSLELHASESHKYLFVASESKTTRFVFS 268
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVSKP++ LRVLTPRV G+D++ SHRGNHFFI RRS E +NSEL+ACPV++TS+TTVL+
Sbjct: 269 LDVSKPQDGLRVLTPRVDGIDSSVSHRGNHFFIQRRSTEFYNSELVACPVNDTSKTTVLL 328
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+Q+IQLF DHLAV+ERE GLQKIT +RLPA G+PL+ LQGG+SV F+DPVYS+
Sbjct: 329 PHRESVKIQEIQLFRDHLAVFEREQGLQKITVHRLPAEGQPLERLQGGRSVIFVDPVYSV 388
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
D +ES F SR+LRF YSS++TPPSVYDYDMD G SV+KKI+TVLGGFD +NY TERKW +
Sbjct: 389 DSTESEFPSRVLRFKYSSMKTPPSVYDYDMDSGTSVVKKIDTVLGGFDVSNYVTERKWVT 448
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQIP+ IVY KNL KLDGSDPLLLYGYGSYEI DP F +SRLSLLDRGFIF IA
Sbjct: 449 ASDGTQIPMSIVYNKNLAKLDGSDPLLLYGYGSYEISVDPYFKTSRLSLLDRGFIFVIAH 508
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
+RGGGE+GRQWYENGK LKKKNTFTDFIACAE LI+ YC+KE+LC+EGRSAGGLL+GAV
Sbjct: 509 VRGGGEMGRQWYENGKLLKKKNTFTDFIACAERLIELKYCSKERLCMEGRSAGGLLMGAV 568
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
+NMRPDLFK VA VPFVDVLTTMLDPTIPLTT+EWEEWGDP KEEFYFYMKSYSPVDNV
Sbjct: 569 VNMRPDLFKVVVAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNV 628
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
AQNYP++LVTAGLNDPRVMYSEP K+VAKLREMKTD+N+LLFKCELGAGHFSKSGRFE+
Sbjct: 629 TAQNYPNMLVTAGLNDPRVMYSEPGKWVAKLREMKTDNNVLLFKCELGAGHFSKSGRFEK 688
Query: 480 LREAAFTYTFLMRALSMLPSVG 501
L+E AF + F+M+ L M+P+ G
Sbjct: 689 LQEDAFMFAFMMKVLDMIPASG 710
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18403046|ref|NP_564567.1| oligopeptidase B [Arabidopsis thaliana] gi|5734786|gb|AAD50051.1|AC007980_16 Similar to oligopeptidases [Arabidopsis thaliana] gi|19310465|gb|AAL84967.1| At1g50380/F14I3_27 [Arabidopsis thaliana] gi|332194421|gb|AEE32542.1| oligopeptidase B [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/502 (77%), Positives = 446/502 (88%), Gaps = 1/502 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDEILRPDK WLHKL +QS+D+CLYHEKDD++SL L ASES K+LF+ASESK TRFVF
Sbjct: 209 MDEILRPDKVWLHKLGTEQSSDVCLYHEKDDMFSLELHASESHKYLFVASESKTTRFVFS 268
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVSK ++ LRVLTPRV G+D++ SHRGNHFFI RRS E +NSEL+ACPVD+TS+TTVL+
Sbjct: 269 LDVSKTQDGLRVLTPRVDGIDSSVSHRGNHFFIQRRSTEFYNSELIACPVDDTSKTTVLL 328
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+Q+IQLF DHLAV+ERE GLQKIT +RLPA G+PL+ LQGG++V F+DPVYS+
Sbjct: 329 PHRESVKIQEIQLFRDHLAVFERENGLQKITVHRLPAEGQPLEGLQGGRNVSFVDPVYSV 388
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
D +ES FSSR+LRF Y S++TPPSVYDYDMD G SV+KKI+TVLGGFD +NY TERKW +
Sbjct: 389 DSTESEFSSRVLRFKYCSMKTPPSVYDYDMDSGTSVVKKIDTVLGGFDASNYVTERKWVA 448
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQIP+ IVY K L KLDGSDPLLLYGYGSYEI DP F +SRLSLLDRGF F IA
Sbjct: 449 ASDGTQIPMSIVYNKKLAKLDGSDPLLLYGYGSYEISVDPYFKASRLSLLDRGFTFVIAH 508
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
+RGGGE+GRQWYENGK LKKKNTFTDFIACAE LI+ YC+KEKLC+EGRSAGGLL+GAV
Sbjct: 509 VRGGGEMGRQWYENGKLLKKKNTFTDFIACAERLIELKYCSKEKLCMEGRSAGGLLMGAV 568
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
+NMRPDLFK +A VPFVDVLTTMLDPTIPLTT+EWEEWGDP KEEFYFYMKSYSPVDNV
Sbjct: 569 VNMRPDLFKVVIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNV 628
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
AQNYP++LVTAGLNDPRVMYSEP K+VAKLREMKTD+N+LLFKCELGAGHFSKSGRFE+
Sbjct: 629 TAQNYPNMLVTAGLNDPRVMYSEPGKWVAKLREMKTDNNVLLFKCELGAGHFSKSGRFEK 688
Query: 480 LREAAFTYTFLMRALSMLPSVG 501
L+E AFT+ F+M+ L M+P+ G
Sbjct: 689 LQEDAFTFAFMMKVLDMIPASG 710
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357117058|ref|XP_003560292.1| PREDICTED: protease 2-like, partial [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/501 (75%), Positives = 447/501 (89%), Gaps = 1/501 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MD ILRPDK W+HKL +DQS+DICLYHEKDD +SLGL ASESKK+LF+ S SK T F+FY
Sbjct: 221 MDNILRPDKVWIHKLGSDQSDDICLYHEKDDTFSLGLHASESKKYLFVESGSKNTSFIFY 280
Query: 61 LDVS-KPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LD+S + +EL VLTPRV G+DT ASHRGNHF+ITRRS+E +NSEL+ACP+DN SETTVL+
Sbjct: 281 LDISSQGKELVVLTPRVYGIDTTASHRGNHFYITRRSEEFYNSELVACPLDNVSETTVLL 340
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+QD+QLF +H+AVYERE GL K+T YRLPA GE + L GG++++F+DP Y++
Sbjct: 341 PHRESVKIQDVQLFENHIAVYERENGLPKVTVYRLPATGESVGQLHGGRAIDFVDPAYAV 400
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
+P S F+S ++R++YSS+RTPPSV+DYDMD G+S+LKKI TVLGGFD +NY TERKWA+
Sbjct: 401 EPEPSQFNSNVVRYYYSSMRTPPSVFDYDMDTGVSILKKINTVLGGFDASNYVTERKWAA 460
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQIP+ I+YRK++V LDGSDP+LLYGYGSYEIC DP F SR SL+DRGFI+ IA
Sbjct: 461 ASDGTQIPMSILYRKDMVNLDGSDPMLLYGYGSYEICIDPTFRGSRFSLVDRGFIYVIAH 520
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GR+WYE+GK LKKKNTFTDFI+CAE+LI+N YCTKEKLCI GRSAGGLL+GAV
Sbjct: 521 IRGGGEMGRKWYEDGKLLKKKNTFTDFISCAEHLIENKYCTKEKLCINGRSAGGLLMGAV 580
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLFKAAVA VPFVDVLTTMLDPTIPLTTAEWEEWGDP KEE+Y+YMKSYSPVDNV
Sbjct: 581 LNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLTTAEWEEWGDPRKEEYYYYMKSYSPVDNV 640
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KAQ YPHILVTAGLNDPRVMYSEPAKFVA+LRE+KTD+N+LLFKCELGAGHFSKSGRFE+
Sbjct: 641 KAQQYPHILVTAGLNDPRVMYSEPAKFVARLRELKTDENLLLFKCELGAGHFSKSGRFEK 700
Query: 480 LREAAFTYTFLMRALSMLPSV 500
LRE AFTY F+++AL M P +
Sbjct: 701 LREDAFTYAFILKALGMTPGL 721
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242097176|ref|XP_002439078.1| hypothetical protein SORBIDRAFT_10g031180 [Sorghum bicolor] gi|241917301|gb|EER90445.1| hypothetical protein SORBIDRAFT_10g031180 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/503 (76%), Positives = 446/503 (88%), Gaps = 1/503 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MD ILRPDK WLHKL +DQS+D CLYHEKDD +SLGLQASESK++LF+ S SK T F+FY
Sbjct: 207 MDSILRPDKVWLHKLGSDQSSDACLYHEKDDTFSLGLQASESKRYLFVESGSKNTSFIFY 266
Query: 61 LDVSKP-EELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LD+SK +EL VLTPRV G+DT ASHRGNHFFI RRSDE +NSEL+ACP+DN +ETT+L+
Sbjct: 267 LDISKQNKELAVLTPRVYGIDTTASHRGNHFFIKRRSDEFYNSELVACPLDNVAETTILL 326
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+QD QLF +H+AVYER GL K+T YRLPA+GE + LQGG++++FIDP Y++
Sbjct: 327 PHRESVKIQDFQLFDNHIAVYERANGLPKVTVYRLPAIGESIGQLQGGQAIDFIDPTYAV 386
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
DP ES F+S +LRFHYSS+RTPPSVYDYDMD G+SVLKKI TVLGGFD +NY TERKWA+
Sbjct: 387 DPEESPFNSSVLRFHYSSMRTPPSVYDYDMDSGVSVLKKIHTVLGGFDGSNYVTERKWAA 446
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
A+DGTQIP+ I+YRK+LVKLDGSDP+LLYGYGSYEIC DP+F SR SL+DRGFI+ IA
Sbjct: 447 AADGTQIPMSILYRKDLVKLDGSDPMLLYGYGSYEICVDPSFRGSRFSLVDRGFIYVIAH 506
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GR+WYE+GK LKKKNTFTDFI CAE+LIKN YC+KEKLCI GRSAGGLL+GAV
Sbjct: 507 IRGGGEMGRKWYEDGKLLKKKNTFTDFIDCAEHLIKNKYCSKEKLCINGRSAGGLLMGAV 566
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLF+AAVA VPFVDV+TTMLDPTIPLTTAEWEEWGDP KEE+Y+YMKSYSPVDNV
Sbjct: 567 LNMRPDLFRAAVAGVPFVDVVTTMLDPTIPLTTAEWEEWGDPRKEEYYYYMKSYSPVDNV 626
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
AQ YP+ILVTAGLNDPRVMYSEPAK+VAKLRE+K DDN+LLFKCELGAGHFSKSGRFE+
Sbjct: 627 TAQEYPNILVTAGLNDPRVMYSEPAKYVAKLRELKRDDNLLLFKCELGAGHFSKSGRFEK 686
Query: 480 LREAAFTYTFLMRALSMLPSVGS 502
L+E AFTY F+++AL M + S
Sbjct: 687 LQEDAFTYAFILKALGMTRKLAS 709
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449458732|ref|XP_004147101.1| PREDICTED: protease 2-like [Cucumis sativus] gi|449517064|ref|XP_004165566.1| PREDICTED: protease 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/503 (76%), Positives = 450/503 (89%), Gaps = 1/503 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDEILRPDKAWLHKL +QS D CLYHEKDD++SL L+ASESKK+LFIASESK TRF FY
Sbjct: 255 MDEILRPDKAWLHKLGTEQSMDTCLYHEKDDMFSLDLEASESKKYLFIASESKFTRFNFY 314
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVS+PE+ L VLTPRV G+DT SHRGNHFFI RRS+E+FNSE++ACP+DNTS TTV++
Sbjct: 315 LDVSRPEDGLVVLTPRVDGIDTYPSHRGNHFFILRRSEEIFNSEVVACPLDNTSATTVIL 374
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+Q+I+LF++H+ + ERE GL K+ Y LP +GEPLK+L+GG++V+F D YS+
Sbjct: 375 PHRESVKIQEIELFLNHIVILEREDGLPKVVVYSLPDIGEPLKTLEGGRAVDFADATYSV 434
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
D ES FSS ILRF YSS++TPPS YDYDM G+SVLKK+ETVLGGFD+N Y TERKWA+
Sbjct: 435 DALESEFSSSILRFCYSSMKTPPSTYDYDMKTGVSVLKKVETVLGGFDSNKYVTERKWAT 494
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
A DGT++P+ IVYRK+LVKLDGSDPLLLYGYGSYE C DP+F +SR+SLLDRGFI+ IA
Sbjct: 495 ALDGTKVPLSIVYRKDLVKLDGSDPLLLYGYGSYEYCIDPSFKASRISLLDRGFIYVIAH 554
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GRQWYENGK LKKKNTFTDFI+ AEYLI+N YC+KEKLCI GRSAGGLLIGAV
Sbjct: 555 IRGGGEMGRQWYENGKLLKKKNTFTDFISSAEYLIENKYCSKEKLCINGRSAGGLLIGAV 614
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
+NMRPDLFKAA+A VPFVDVLTTMLDPTIPLTT+EWEEWGDP KEEFYFYMKSYSPVDNV
Sbjct: 615 INMRPDLFKAAIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNV 674
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KAQNYP +L+TAGLNDPRV+YSEPAKFVAKLR KTD+N+LLFKCELGAGHFSKSGRFE+
Sbjct: 675 KAQNYPDVLITAGLNDPRVLYSEPAKFVAKLRATKTDNNLLLFKCELGAGHFSKSGRFEK 734
Query: 480 LREAAFTYTFLMRALSMLPSVGS 502
L+E AFTY F++++L+M+P+VG+
Sbjct: 735 LQEDAFTYAFILKSLNMIPAVGN 757
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110349985|dbj|BAE97779.1| oligopeptidase B [Triticum aestivum] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/504 (75%), Positives = 447/504 (88%), Gaps = 2/504 (0%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MD ILRPDK WLHKL +DQS+D C+YHEKDD +SLGL ASESK++LF+ S SK T F+FY
Sbjct: 146 MDNILRPDKVWLHKLGSDQSDDTCMYHEKDDTFSLGLHASESKQYLFVGSGSKNTSFIFY 205
Query: 61 LDV-SKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LD+ ++ +EL VLTPRV G+DT ASHRGNHF+ITRRS+E +NSEL+ACP++N +ETTVL+
Sbjct: 206 LDIPNQSKELAVLTPRVDGIDTTASHRGNHFYITRRSEEFYNSELVACPLNNVAETTVLL 265
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+QD+QLF +H+AVYERE GL K T YRLP GE + LQGG++++FIDP Y++
Sbjct: 266 PHRESVKIQDVQLFENHIAVYERENGLPKATVYRLPGTGEAVGQLQGGRAIDFIDPAYAV 325
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
+P S F S ++RF+YSS+RTPPS++DYDMD G+SVLKKI+TVLGGFD +NY TERKWA+
Sbjct: 326 EPEPSQFHSNVVRFYYSSMRTPPSIFDYDMDTGVSVLKKIDTVLGGFDVSNYVTERKWAA 385
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQIP+ I+YRK++VKLDGSDP+LLYGYGSYEIC DP F SR SL+DRGFI+ IA
Sbjct: 386 ASDGTQIPMSILYRKDMVKLDGSDPMLLYGYGSYEICIDPTFRGSRFSLVDRGFIYVIAH 445
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
IRGGGE+GR WYE+GK LKKKNTFTDFIACAE+LI+N YCTKEKLC+ GRSAGGLL+G V
Sbjct: 446 IRGGGEMGRNWYEDGKLLKKKNTFTDFIACAEHLIENKYCTKEKLCVNGRSAGGLLMGDV 505
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
LNMRPDLFKAAVA VPFVDVLTTMLDPTIPLTTAEWEEWGDP KEE+Y+YMKSYSPVDNV
Sbjct: 506 LNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLTTAEWEEWGDPRKEEYYYYMKSYSPVDNV 565
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
KA++YPHILVTAGLNDPRVMYSEPAKFVAKLRE+KTDDN+LLFKCELGAGHFSKSGRFE+
Sbjct: 566 KARDYPHILVTAGLNDPRVMYSEPAKFVAKLRELKTDDNLLLFKCELGAGHFSKSGRFEK 625
Query: 480 LREAAFTYTFLMRALSML-PSVGS 502
LRE AFTY F+++AL M+ P+ S
Sbjct: 626 LREDAFTYAFILKALGMMTPTTAS 649
|
Source: Triticum aestivum Species: Triticum aestivum Genus: Triticum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 505 | ||||||
| TAIR|locus:2011997 | 710 | AT1G50380 [Arabidopsis thalian | 0.992 | 0.705 | 0.772 | 1.7e-217 | |
| UNIPROTKB|P24555 | 686 | ptrB "oligopeptidase B" [Esche | 0.958 | 0.705 | 0.442 | 5e-99 | |
| TIGR_CMR|CPS_4644 | 719 | CPS_4644 "protease II" [Colwel | 0.932 | 0.655 | 0.425 | 4.7e-96 | |
| TIGR_CMR|CPS_3026 | 704 | CPS_3026 "protease II" [Colwel | 0.964 | 0.691 | 0.415 | 2.6e-95 | |
| UNIPROTKB|Q4KGJ9 | 684 | ptrB "Protease 2" [Pseudomonas | 0.956 | 0.706 | 0.421 | 2.1e-93 | |
| TIGR_CMR|SO_0144 | 711 | SO_0144 "protease II" [Shewane | 0.954 | 0.677 | 0.413 | 5.5e-93 | |
| TAIR|locus:2205415 | 757 | AT1G69020 [Arabidopsis thalian | 0.526 | 0.351 | 0.388 | 2.7e-65 | |
| DICTYBASE|DDB_G0292866 | 866 | DDB_G0292866 "oligopeptidase B | 0.871 | 0.508 | 0.322 | 5e-57 | |
| TIGR_CMR|CPS_0086 | 723 | CPS_0086 "prolyl endopeptidase | 0.914 | 0.639 | 0.327 | 1.1e-53 | |
| TIGR_CMR|SO_2753 | 727 | SO_2753 "prolyl endopeptidase" | 0.932 | 0.647 | 0.298 | 1.3e-50 |
| TAIR|locus:2011997 AT1G50380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2101 (744.6 bits), Expect = 1.7e-217, P = 1.7e-217
Identities = 388/502 (77%), Positives = 446/502 (88%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
MDEILRPDK WLHKL +QS+D+CLYHEKDD++SL L ASES K+LF+ASESK TRFVF
Sbjct: 209 MDEILRPDKVWLHKLGTEQSSDVCLYHEKDDMFSLELHASESHKYLFVASESKTTRFVFS 268
Query: 61 LDVSKPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119
LDVSK ++ LRVLTPRV G+D++ SHRGNHFFI RRS E +NSEL+ACPVD+TS+TTVL+
Sbjct: 269 LDVSKTQDGLRVLTPRVDGIDSSVSHRGNHFFIQRRSTEFYNSELIACPVDDTSKTTVLL 328
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
PHRESVK+Q+IQLF DHLAV+ERE GLQKIT +RLPA G+PL+ LQGG++V F+DPVYS+
Sbjct: 329 PHRESVKIQEIQLFRDHLAVFERENGLQKITVHRLPAEGQPLEGLQGGRNVSFVDPVYSV 388
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS 239
D +ES FSSR+LRF Y S++TPPSVYDYDMD G SV+KKI+TVLGGFD +NY TERKW +
Sbjct: 389 DSTESEFSSRVLRFKYCSMKTPPSVYDYDMDSGTSVVKKIDTVLGGFDASNYVTERKWVA 448
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
ASDGTQIP+ IVY K L KLDGSDPLLLYGYGSYEI DP F +SRLSLLDRGF F IA
Sbjct: 449 ASDGTQIPMSIVYNKKLAKLDGSDPLLLYGYGSYEISVDPYFKASRLSLLDRGFTFVIAH 508
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359
+RGGGE+GRQWYENGK LKKKNTFTDFIACAE LI+ YC+KEKLC+EGRSAGGLL+GAV
Sbjct: 509 VRGGGEMGRQWYENGKLLKKKNTFTDFIACAERLIELKYCSKEKLCMEGRSAGGLLMGAV 568
Query: 360 LNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 419
+NMRPDLFK +A VPFVDVLTTMLDPTIPLTT+EWEEWGDP KEEFYFYMKSYSPVDNV
Sbjct: 569 VNMRPDLFKVVIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNV 628
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479
AQNYP++LVTAGLNDPRVMYSEP K+VAKLREMKTD+N+LLFKCELGAGHFSKSGRFE+
Sbjct: 629 TAQNYPNMLVTAGLNDPRVMYSEPGKWVAKLREMKTDNNVLLFKCELGAGHFSKSGRFEK 688
Query: 480 LREAAFTYTFLMRALSMLPSVG 501
L+E AFT+ F+M+ L M+P+ G
Sbjct: 689 LQEDAFTFAFMMKVLDMIPASG 710
|
|
| UNIPROTKB|P24555 ptrB "oligopeptidase B" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 224/506 (44%), Positives = 306/506 (60%)
Query: 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 64
L P + W H + S D +Y EKDD Y + L + SK ++ I S T V LD
Sbjct: 196 LLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAE 255
Query: 65 KPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE 123
+ E V PR + + H + F++ R + N L + + + LIP RE
Sbjct: 256 MADAEPFVFLPRRKDHEYSLDHYQHRFYL-RSNRHGKNFGLYRTRMRDEQQWEELIPPRE 314
Query: 124 SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS--IDP 181
++ L+ LF D L V ER+ GL T+ R + + + G + F DP Y I
Sbjct: 315 NIMLEGFTLFTDWLVVEERQRGL---TSLR--QINRKTREVIG---IAFDDPAYVTWIAY 366
Query: 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS-VLKKIETVLGGFDTNNYFTERKWASA 240
+ ++R LR+ YSS+ TP ++++ DMD G VLK+ E + GF NY +E W A
Sbjct: 367 NPEPETAR-LRYGYSSMTTPDTLFELDMDTGERRVLKQTE--VPGFYAANYRSEHLWIVA 423
Query: 241 SDGTQIPICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQ 299
DG ++P+ +VY RK+ K G +PLL+YGYGSY D F+ SRLSLLDRGF++AI
Sbjct: 424 RDGVEVPVSLVYHRKHFRK--GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVH 481
Query: 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE-GRSAGGLLIGA 358
+RGGGELG+QWYE+GKFLKKKNTF D++ + L+K Y + LC G SAGG+L+G
Sbjct: 482 VRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS-LCYAMGGSAGGMLMGV 540
Query: 359 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDN 418
+N RP+LF +A VPFVDV+TTMLD +IPLTT E+EEWG+P ++Y YMKSYSP DN
Sbjct: 541 AINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDN 600
Query: 419 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 478
V AQ YPH+LVT GL+D +V Y EPAK+VAKLRE+KTDD++LL ++ +GH KSGRF+
Sbjct: 601 VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFK 660
Query: 479 RLREAAFTYTFLMR-ALSMLPSVGSE 503
A Y FL+ A LP+ ++
Sbjct: 661 SYEGVAMEYAFLVALAQGTLPATPAD 686
|
|
| TIGR_CMR|CPS_4644 CPS_4644 "protease II" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 209/491 (42%), Positives = 298/491 (60%)
Query: 13 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL-RV 71
H L Q+ D +Y E + Y GL S+ +FI S V +D + + +
Sbjct: 239 HTLGTPQATDEMVYEESNKAYYTGLSKSKDGSSVFIWHSSTEASGVSVIDADNAKAMPKK 298
Query: 72 LTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQ 128
R G + + S + ++I + N L+ + + T +IP ++VKL+
Sbjct: 299 FIEREEGHEYSISKMNDWYYINTNW-QATNFRLMKVNKKHLGDKTQWQDVIPANDAVKLE 357
Query: 129 DIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS--VEFIDPVYSIDP-SESV 185
D +LF +HL +RE G+ ++T ++ L GK + F D Y++ +
Sbjct: 358 DYELFANHLVYQQRENGISRLT----------IQELSSGKKQQLSFNDTAYTLSLYGNNE 407
Query: 186 FSSRILRFHYSSLRTPPSVYDYDMD-MGISVLKKIETVLGGFDTNNYFTERKWASASDGT 244
+ LR +Y+S TP + YD D++ + + LK+ + VLG FD+NNY +ER + A DG
Sbjct: 408 LKNNKLRLYYTSFTTPGTHYDVDLNTLDKTQLKQAK-VLGDFDSNNYASERIFVKARDGK 466
Query: 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG 304
++P+ +VYRK+ K DG++PL Y YGSY DP+F+ SRLSLLDRGF++A+A IRG
Sbjct: 467 KVPVSLVYRKDKFKKDGTNPLYQYAYGSYGHTIDPSFSVSRLSLLDRGFVYAVAHIRGSE 526
Query: 305 ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 364
LGR WYE+GK L K NTFTDFI + L Y KE + G SAGGLL+GAV+NM P
Sbjct: 527 MLGRPWYEDGKKLTKMNTFTDFIDVTKDLTAQGYGDKENVFAVGGSAGGLLMGAVINMAP 586
Query: 365 DLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNY 424
+ +K AAVPFVDV+TTMLD +IPLTT E++EWG+P ++ +Y YM SYSP D VKAQ+Y
Sbjct: 587 EQYKGIAAAVPFVDVVTTMLDESIPLTTNEFKEWGNPKEKTYYDYMLSYSPYDQVKAQDY 646
Query: 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAA 484
P+ILVT GL+D +V Y EP K+VAKLR+ KTDDN+LLFK ++ AGH SGRF+R+ + A
Sbjct: 647 PNILVTTGLHDSQVQYFEPMKWVAKLRDYKTDDNLLLFKTDMEAGHGGASGRFKRIHDTA 706
Query: 485 FTYTFLMRALS 495
Y+F + L+
Sbjct: 707 LQYSFFIDLLN 717
|
|
| TIGR_CMR|CPS_3026 CPS_3026 "protease II" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 208/501 (41%), Positives = 296/501 (59%)
Query: 3 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD 62
E L + + HKL + QS+D+ +Y E D + + L S ++I + + L
Sbjct: 212 ETLLGTQVYRHKLGSPQSDDVLVYEEDDYSFYMSLDKSRDDSQIYICLHATESTHYLALS 271
Query: 63 VSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT---VL 118
+P+ E L P + A G HF+I + N +L+ + + +
Sbjct: 272 ADEPDGEFDELFPYQEQHEYHADKMGEHFYIVTNF-QAKNFKLMKAAISQVHDINNWQEV 330
Query: 119 IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS 178
IPHR+ V L+ I+LF + V ERE G + + GE + + F DP Y
Sbjct: 331 IPHRKDVLLEGIELFQNFTVVTEREHGQIRFIVHTTQ--GE---NAGHQYPLSFDDPCYF 385
Query: 179 IDPSESVF-SSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKW 237
++ S R +YSSL TP S++++D+ G L K + VLG F +Y +ER +
Sbjct: 386 ACLGDNPEPKSTTARLYYSSLTTPGSLFEFDLATGERKLLKQQKVLGDFTKEDYQSERLF 445
Query: 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAI 297
+A DGT++P+ IVYR + + DGS+PLL YGYG+Y I DP F+S LSLLDRGF++ I
Sbjct: 446 ITARDGTEVPVSIVYRSDTFQKDGSNPLLQYGYGAYGITIDPDFSSQTLSLLDRGFVYVI 505
Query: 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357
A +RG LGR+WYE GK K+NTF DFI + L++ Y K+K+ G SAGGLL+G
Sbjct: 506 AHVRGSEMLGREWYETGKMAHKQNTFNDFIDVTKALVEQGYGAKDKIFASGGSAGGLLMG 565
Query: 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417
AV+N P+L+ A VPF+DVLTTMLD +IPLTT E+ EWG+P + + Y + +YSP+D
Sbjct: 566 AVVNQAPELYLGIGAHVPFLDVLTTMLDESIPLTTNEYNEWGNPNEAQAYQSILAYSPID 625
Query: 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477
N+ AQ+YPHILVT GL+D +V Y EP K+VAK+RE KTDDN+LLFK ++ AGH SGRF
Sbjct: 626 NISAQHYPHILVTTGLHDSQVQYFEPMKWVAKMREFKTDDNLLLFKTDMEAGHGGASGRF 685
Query: 478 ERLREAAFTYTFLMRALSMLP 498
+ L+E A +F +S+LP
Sbjct: 686 KSLKEKALEMSFF---ISLLP 703
|
|
| UNIPROTKB|Q4KGJ9 ptrB "Protease 2" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 213/505 (42%), Positives = 292/505 (57%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 60
+D+ RP K ++L+ + ++ +HE D + L S S++ L ++ SK T +
Sbjct: 192 LDDTHRPHKLLRYRLDGTAAEEV--FHEPDGRFFLHCYRSSSERQLLLSLGSKTTGETWA 249
Query: 61 LDVSKPE-ELRVLTPRVVGVDTAASHR---GNHFFITRRSDELFNSELLACP----VDNT 112
LD ++P+ L PRV G + H G + R + + N L +
Sbjct: 250 LDATQPQLPFTCLAPRVEGHEYDVDHGLLDGQWTWFIRSNRDGINFALYQAADNGAIPEQ 309
Query: 113 SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 172
+ +L+PH V L + L + + REGGL I + P + L + V+
Sbjct: 310 DDWQLLVPHNPEVMLDGVTLNAAAMTLSLREGGLPIIEVH-------P-RDLPVYR-VQL 360
Query: 173 IDPVYSIDPSESV-FSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNY 231
D YS+ S+ FSS +R Y +L P V + G + K VLG FD Y
Sbjct: 361 PDAAYSLHVQNSLEFSSERIRLRYEALNRPAQVRQLQLADGQQQVLKETPVLGPFDPEAY 420
Query: 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR 291
++R WA+A+DGTQ+PI +V +++ L PL LYGYG+Y DP F+ +RLSLLDR
Sbjct: 421 VSQRLWATAADGTQVPISLVVKRDC--LGQPTPLYLYGYGAYGESLDPWFSHARLSLLDR 478
Query: 292 GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSA 351
G FAIA +RGGGELG WY GK K+NTF+DFIACAE+LI + ++L I G SA
Sbjct: 479 GVAFAIAHVRGGGELGEAWYRAGKQEHKQNTFSDFIACAEHLIAQGLTSAQQLAISGGSA 538
Query: 352 GGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMK 411
GGLLIGAVLN RP+LFK A+A VPFVDVL TMLDP +PLT E++EWG+P + E Y +K
Sbjct: 539 GGLLIGAVLNQRPELFKVAIAEVPFVDVLNTMLDPELPLTVTEYDEWGNPEEPEVYARIK 598
Query: 412 SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471
+Y+P +NV+AQ YP LV AG ND RV Y E AK+VA+LR +TDDN LL K ELGAGH
Sbjct: 599 AYAPYENVRAQAYPATLVIAGYNDSRVQYWEAAKWVARLRATRTDDNPLLLKTELGAGHG 658
Query: 472 SKSGRFERLREAAFTYTFLMRALSM 496
SGR++ LR+ A Y F++ L +
Sbjct: 659 GMSGRYQGLRDVALEYAFILNILGL 683
|
|
| TIGR_CMR|SO_0144 SO_0144 "protease II" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 210/508 (41%), Positives = 301/508 (59%)
Query: 3 EILRPDKAWLHKLEADQSNDICLYHEKDDIY--SLGLQASESKKFLFIASESKITRFVFY 60
+ L ++ + H+L QS D+ +Y E+DD Y SLG ES+ LF ES T V
Sbjct: 214 QTLLGNRVYRHELGTPQSRDVLVYEEQDDAYYISLGKSLDESQIVLF--HESTTTSEVSV 271
Query: 61 LDVSKPEEL-RVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-- 117
LD + P L + + R G + + S G+ +++ + N L+ + + ++ +
Sbjct: 272 LDANDPLSLFKPVLAREEGHEYSVSKLGDSYYVLTNW-QATNFRLMKVAIKDAADKSKWQ 330
Query: 118 -LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 176
++ H + +L+D + D+L + RE GL +I +P G+ K + + F +P
Sbjct: 331 EVVAHNPNARLEDELVLKDYLIIQTRENGLTRIKV--MPFNGQ--KPFE----LSFDEPA 382
Query: 177 Y--SIDPSESVFSSRILRFHYSSLRTPPSVYDYDM-DMGISVLKKIETVLGGFDTNNYFT 233
Y +D + S + LR YSSL TP ++Y+Y + + L K E VLGGFD Y
Sbjct: 383 YVLGLDVNAQQDSDK-LRVFYSSLTTPETIYEYHLSNPDRRDLLKQEQVLGGFDAGAYRA 441
Query: 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF 293
ER + +A DG ++P+ +VYRK+ K DG++PL YGYGSY +P F+SS +SLLDRGF
Sbjct: 442 ERVFVTARDGAKVPVSLVYRKDKFKKDGTNPLYQYGYGSYGYTVEPDFSSSVISLLDRGF 501
Query: 294 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGG 353
++AIA +RGG LGR WY+ GK L KKN+F DFI L + Y K K+ G SAGG
Sbjct: 502 VYAIAHVRGGEMLGRPWYDAGKLLNKKNSFYDFIDVTTALTEQGYGDKNKVVAAGGSAGG 561
Query: 354 LLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSY 413
LL+GA+ NM P+ + A A VPFVDV+TTMLD +IPLTT E++EWG+P + ++ YM SY
Sbjct: 562 LLMGAIANMAPEKYFAIAAHVPFVDVVTTMLDESIPLTTNEYDEWGNPNDKTYFDYMLSY 621
Query: 414 SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM-----KTDDNILLFKCELGA 468
SP DNV YPH+LVT GL+D +V Y EPAK+VAKLRE+ K DD +LLF ++ A
Sbjct: 622 SPYDNVADHEYPHLLVTTGLHDSQVQYFEPAKWVAKLREVQNKWYKLDDKVLLFHVDMDA 681
Query: 469 GHFSKSGRFERLREAAFTYTFLMRALSM 496
GH KSGR+ + ++ A Y F + L M
Sbjct: 682 GHGGKSGRYRQYQDTAQEYAFFLSLLGM 709
|
|
| TAIR|locus:2205415 AT1G69020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 105/270 (38%), Positives = 161/270 (59%)
Query: 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLS 287
++ Y ER+ S+ DG ++P+ I+Y + K S P +L GYG+Y D ++ ++RLS
Sbjct: 483 SDTYVCERQEVSSHDGVEVPLTILYSREAWKKSES-PGMLIGYGAYGEVLDKSWCTNRLS 541
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE 347
+LDRG++ A A +RGGG W+++G K+N+ DFI A+YL++ Y + L
Sbjct: 542 MLDRGWVIAFADVRGGGSGEFSWHKSGTRSLKQNSIQDFIYSAKYLVEKGYVHRHHLAAV 601
Query: 348 GRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFY 407
G SAG +L A +NM P LF+A + VPFVDVL T+ DP +PLT + EE+G+P + +
Sbjct: 602 GYSAGAILPAAAMNMHPSLFQAVILKVPFVDVLNTLSDPNLPLTLLDHEEFGNPDNQTDF 661
Query: 408 FYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD--NILLFKC 464
+ SYSP D ++ YP +LVT +D RV E AK+VAK+R+ D ++ K
Sbjct: 662 GSILSYSPYDKIRKDVCYPSMLVTTSFHDSRVGVWEGAKWVAKIRDSTCHDCSRAVILKT 721
Query: 465 ELGAGHFSKSGRFERLREAAFTYTFLMRAL 494
+ GHF + GR+ + E AF Y FL++ +
Sbjct: 722 NMNGGHFGEGGRYAQCEETAFDYAFLLKVM 751
|
|
| DICTYBASE|DDB_G0292866 DDB_G0292866 "oligopeptidase B" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 5.0e-57, Sum P(2) = 5.0e-57
Identities = 155/480 (32%), Positives = 258/480 (53%)
Query: 12 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV----SKP- 66
L++ E +QS ++ +Y E++ Y L + + +++F S KI+ ++Y + S+P
Sbjct: 343 LNEEEVNQS-ELMIY-EENPAYYLDIYVPKDGEYIFYLSNCKISTLIYYNKLHDNPSEPI 400
Query: 67 --EELRVLTPRVVGVDTAASHRGNHFFITRRSDEL-FNSELLACPVDNTS--ETTVLIPH 121
+ +++ RV ++ A H G+ F+I +++ N + ++N + + IP
Sbjct: 401 TSKSYKIMLSRVDNLEYYAEHNGDEFYIFANANKGDLNIYKVKDTIENGKFHDLELFIPS 460
Query: 122 RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID--PVYSI 179
++D+ ++ D+L + + L K R+ + + ++ + KS+E I P I
Sbjct: 461 EAQSMIKDVDMYKDYLVLND----LHKFQP-RIRIISKNAETNRFDKSLEKIITFPHKII 515
Query: 180 DPSESVFSSRILRFHYS-SLRTPP-SVYDYDMDM--G-ISVL-KKIETVLGGFDTNNYFT 233
+ S V H+ S TP +V + + G I++L + IE + + + T
Sbjct: 516 ELSMGVNGGYENNEHFFLSYCTPTQNVIRTKISLKDGTITILGESIERGPLTINPDAFET 575
Query: 234 ERKWA-SASDGT-QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR 291
+ W S SD + +IP+ I Y K V+ DG P +L+GYGSY +N L L++
Sbjct: 576 DILWVPSKSDPSIKIPLSICYNKKAVRFDGKTPCVLHGYGSYGTVYSLLYNVEDLLLMNA 635
Query: 292 GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSA 351
GFI A A +RGG ELGR WY +GK L KKNTF+D+I C EYL +N Y + L G SA
Sbjct: 636 GFIVARAHVRGGSELGRTWYNDGKLLNKKNTFSDYIDCVEYLFENKYTSPNYLIGRGSSA 695
Query: 352 GGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYF-YM 410
GGLL+ V P F ++ VPF DVLT+MLD ++PLT E+ EWG+P ++ F Y+
Sbjct: 696 GGLLMCNVALTYPHYFSGIISQVPFADVLTSMLDESLPLTIHEYGEWGNPNLDKQVFNYI 755
Query: 411 KSYSP---VD--NVKA--QNYPHILVTAGLNDPRVMYSEPAKFVAKLR-EMKT----DDN 458
K Y P +D N+++ ++ P++ +T +D RV + +P K+VAKLR ++K+ DDN
Sbjct: 756 KQYDPYILLDDPNIQSSLKSLPNLYITCSTSDYRVPFWQPLKWVAKLRNKLKSLTHGDDN 815
|
|
| TIGR_CMR|CPS_0086 CPS_0086 "prolyl endopeptidase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 162/494 (32%), Positives = 249/494 (50%)
Query: 9 KAWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKFLFIASESKITRFVFYL-DVS 64
K + H L Q D ++ E+ Y +G ++ +FL I+ + YL D++
Sbjct: 241 KLYYHVLGQPQKEDKVIFGNTAEQKRRY-VGGTVTDDNRFLLISGAISTSGNDLYLKDLT 299
Query: 65 KPEE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE 123
KP L +T DT + I D+LF L P N TV
Sbjct: 300 KPNSPLLTITDNF-DADT--------YVIENEGDKLFLVTNLGAP--NKKIVTVNAKAPA 348
Query: 124 SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID-P-VYSIDP 181
S D D++ GG T Y + A+ + + GK V I+ P V S
Sbjct: 349 SKNWTDFIAETDYVLSASTGGGFF-FTEYMVDAISKVYQYDYQGKQVREINLPGVGSASA 407
Query: 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS-VLKKIETVLGGFDTNNYFTERKWASA 240
E L + +S+ +TP ++Y Y++D G S V +K FD++ Y +++ + +
Sbjct: 408 LEGDKDESTLYYSFSNYKTPGTIYSYNIDKGNSDVYRKSGAK---FDSDAYESKQVFYPS 464
Query: 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQI 300
DGT++P+ I Y+K ++L+G +P +LYGYG + I P F+ SR L++G I+A+A +
Sbjct: 465 KDGTKVPMIITYKKG-IELNGKNPTILYGYGGFNISLTPRFSVSRAVWLEQGGIYAVANL 523
Query: 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 360
RGGGE G+ W++ G L K+N F DFIA EYLIK Y + + L I G S GGLL+GAV+
Sbjct: 524 RGGGEYGKTWHKAGTQLDKQNVFDDFIAAGEYLIKQDYTSSDYLAINGGSNGGLLVGAVM 583
Query: 361 NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE-EWGDPWK-EEFYFYMKSYSPVDN 418
RPDL + A+ AV +D+L T A W ++G + EE + Y+K YSPV N
Sbjct: 584 TQRPDLMQVALPAVGVLDMLRYH---TFT-AGAGWAYDYGTAEQSEEMFTYLKGYSPVHN 639
Query: 419 VKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477
VKA +YP +VT G +D RV+ + KF A+L+ + + L + E AGH + +
Sbjct: 640 VKAGVSYPATMVTTGDHDDRVVPAHSFKFAAELQAKQAGNAPTLIRIETNAGHGAGTPVS 699
Query: 478 ERLREAAFTYTFLM 491
+ + + A Y F +
Sbjct: 700 KTIEQYADIYAFTL 713
|
|
| TIGR_CMR|SO_2753 SO_2753 "prolyl endopeptidase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 149/499 (29%), Positives = 245/499 (49%)
Query: 9 KAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIA-SES--KITRFVFYLDVS 64
K + HKL DQ D+ +Y ++ + G+ SE ++L ++ S+ K RF FY +
Sbjct: 243 KVYYHKLGTDQRQDLLIYERPQNKDWGFGIDVSEKGEYLLLSISQGTDKRNRF-FYKSLF 301
Query: 65 KPEELRVLTPRVVGVDTAASHRGNH--FFITRRSDELFNSELLACPVDNT--SETTVLIP 120
+P+ V ++ ++ GN F + + N +++A N+ S+ +IP
Sbjct: 302 EPKAQVV--ELILKLEAEYEFLGNDGTVFYFKTDLDAPNGKVIAIDTRNSDKSQWQTIIP 359
Query: 121 HRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 180
+ + + + DHL V L +++ + + +L G +V S D
Sbjct: 360 ESKD-PINKVAIINDHLVVSYLHDVLGQLSIFSMGGQKRQEVTLPGKGNVAGPFGKASKD 418
Query: 181 PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASA 240
VF+S I P + Y +D S + V F+ +NY +E+ + ++
Sbjct: 419 YFYYVFNSYI---------QPETTYKFDFKTAESTVVAKPQV--SFNPDNYVSEQVFYTS 467
Query: 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQI 300
DGT++P+ + Y+K LV+ +G +P LLY YG + I P F+ + ++ LD G I+A+ +
Sbjct: 468 KDGTRVPMMLSYKKGLVR-NGQNPTLLYAYGGFAISMTPRFSPANIAWLDMGGIYAVPSL 526
Query: 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 360
RGG + G W++ G F KK+N F D+ A AEYLI Y KL GRS GGLL+GA L
Sbjct: 527 RGGADYGESWHQAGMFDKKQNVFDDYFAAAEYLINEKYTNSTKLGAYGRSNGGLLMGAAL 586
Query: 361 NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVK 420
RP+LF A + AV +D+L + A E+G E + + +YSP NVK
Sbjct: 587 TQRPELFAAVLPAVGVLDMLRFH---KFTIGWAWTSEYGSADNAEQFPALLAYSPYHNVK 643
Query: 421 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 480
AQ YP +V +D RV+ KF A ++E + D ++ + E AGH + ++
Sbjct: 644 AQAYPATMVMTADHDDRVVPLHSFKFAAMMQEKQQGDKPVIMRIESNAGHGAGKPTSMKI 703
Query: 481 REAAFTYTFLMRALSM-LP 498
E A Y+FL ++ + LP
Sbjct: 704 DEFADIYSFLWQSFGLTLP 722
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 505 | |||
| COG1770 | 682 | COG1770, PtrB, Protease II [Amino acid transport a | 0.0 | |
| PRK10115 | 686 | PRK10115, PRK10115, protease 2; Provisional | 1e-143 | |
| pfam00326 | 212 | pfam00326, Peptidase_S9, Prolyl oligopeptidase fam | 4e-76 | |
| COG1505 | 648 | COG1505, COG1505, Serine proteases of the peptidas | 5e-64 | |
| pfam02897 | 412 | pfam02897, Peptidase_S9_N, Prolyl oligopeptidase, | 5e-41 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 2e-17 |
| >gnl|CDD|224684 COG1770, PtrB, Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 589 bits (1521), Expect = 0.0
Identities = 252/497 (50%), Positives = 326/497 (65%), Gaps = 15/497 (3%)
Query: 2 DEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL 61
DE RPDK W H+L S+D +Y EKDD + L + S S+ ++ I+ S IT V L
Sbjct: 194 DENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLL 253
Query: 62 DVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET-TVLI 119
D PE E +V+ PR GV+ + H G+ F+I + + N +L+ PV LI
Sbjct: 254 DADDPEAEPKVVLPRENGVEYSVEHGGDRFYI-LSNADGKNFKLVRAPVSADKSNWRELI 312
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS- 178
PHRE V+L+ + LF DHL + ER+ GL ++ + + + F D YS
Sbjct: 313 PHREDVRLEGVDLFADHLVLLERQEGLPRV--VVRD------RKTGEERGIAFDDEAYSA 364
Query: 179 -IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKW 237
+ + S R LR+ YSS+ TP +++DYDM G L K + V GGFD +Y + R W
Sbjct: 365 GLSGNPEFDSDR-LRYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRIW 423
Query: 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAI 297
A+A DG Q+P+ +VYRK+ KLDGS PLLLYGYG+Y I DP+F+ +RLSLLDRGF++AI
Sbjct: 424 ATADDGVQVPVSLVYRKD-TKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAI 482
Query: 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357
A +RGGGELGR WYE+GK L KKNTFTDFIA A +L+K Y + +++ G SAGG+L+G
Sbjct: 483 AHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMG 542
Query: 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417
AV NM PDLF +A VPFVDVLTTMLDP++PLT EW+EWG+P E+Y Y+KSYSP D
Sbjct: 543 AVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYD 602
Query: 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477
NV+AQ YP ILVT GLNDPRV Y EPAK+VAKLRE+KTD N LL K + AGH SGRF
Sbjct: 603 NVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRF 662
Query: 478 ERLREAAFTYTFLMRAL 494
+RL E AF Y FL++
Sbjct: 663 QRLEEIAFEYAFLLKLA 679
|
Length = 682 |
| >gnl|CDD|182247 PRK10115, PRK10115, protease 2; Provisional | Back alignment and domain information |
|---|
Score = 426 bits (1098), Expect = e-143
Identities = 219/493 (44%), Positives = 297/493 (60%), Gaps = 21/493 (4%)
Query: 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 64
L P + W H + S D +Y EKDD + + L + SK ++ I S T V LD
Sbjct: 196 LLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255
Query: 65 KPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE 123
+ E V PR + + H H F R + N L V + + LIP RE
Sbjct: 256 LADAEPFVFLPRRKDHEYSLDHY-QHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRE 314
Query: 124 SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY----SI 179
++ L+ LF D L V ER+ GL T+ R + + + G + F DP Y +
Sbjct: 315 NIMLEGFTLFTDWLVVEERQRGL---TSLR--QINRKTREVIG---IAFDDPAYVTWIAY 366
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG-ISVLKKIETVLGGFDTNNYFTERKWA 238
+P +SR LR+ YSS+ TP ++++ DMD G VLK+ E + GFD NY +E W
Sbjct: 367 NPEPE--TSR-LRYGYSSMTTPDTLFELDMDTGERRVLKQTE--VPGFDAANYRSEHLWI 421
Query: 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIA 298
+A DG ++P+ +VY + + G +PLL+YGYGSY D F+ SRLSLLDRGF++AI
Sbjct: 422 TARDGVEVPVSLVYHRKHFR-KGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV 480
Query: 299 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358
+RGGGELG+QWYE+GKFLKKKNTF D++ + L+K Y + G SAGG+L+G
Sbjct: 481 HVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGV 540
Query: 359 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDN 418
+N RP+LF +A VPFVDV+TTMLD +IPLTT E+EEWG+P ++Y YMKSYSP DN
Sbjct: 541 AINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDN 600
Query: 419 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 478
V AQ YPH+LVT GL+D +V Y EPAK+VAKLRE+KTDD++LL ++ +GH KSGRF+
Sbjct: 601 VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFK 660
Query: 479 RLREAAFTYTFLM 491
A Y FL+
Sbjct: 661 SYEGVAMEYAFLI 673
|
Length = 686 |
| >gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 4e-76
Identities = 100/219 (45%), Positives = 124/219 (56%), Gaps = 9/219 (4%)
Query: 279 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338
P+F+ + L DRG++ A+A RG G GR W++ GK +N F DFIA AEYLI Y
Sbjct: 1 PSFSWNLQLLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQGY 60
Query: 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 398
++L I G S GG L GA LN RPDLFKAAVA VP VD LT M D + P T + EW
Sbjct: 61 VDPDRLAIWGGSYGGYLTGAALNQRPDLFKAAVAVVPVVDWLTYMSDTS-PFTE-RYMEW 118
Query: 399 GDPWK-EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457
G+PW EE Y Y+ YSP DNVKA YP +L+ GL+D RV +E K VA L+
Sbjct: 119 GNPWDNEEGYRYLSPYSPYDNVKA--YPPLLLIHGLHDDRVPPAEALKLVAALQA--KGK 174
Query: 458 NILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496
N+LL GH R + E A FL++ L
Sbjct: 175 NVLL-LIFPDEGHGGGKPRN-KREEYARELAFLLKVLGG 211
|
Length = 212 |
| >gnl|CDD|224422 COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 5e-64
Identities = 126/330 (38%), Positives = 173/330 (52%), Gaps = 15/330 (4%)
Query: 168 KSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFD 227
+ VE P S + ++S TP ++Y D+ G L+ I FD
Sbjct: 332 EEVELPPPGALGMGSADKDGDEVF-LAFTSFTTPSTLYRLDLFGG--ELEVIREQPVQFD 388
Query: 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLS 287
+NY E+ +A++ DGT+IP IV + K D +P LLY YG + I P F+ SR
Sbjct: 389 ADNYEVEQFFATSKDGTRIPYFIVRKG--AKKD-ENPTLLYAYGGFNISLTPRFSGSRKL 445
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE 347
L+RG +F +A IRGGGE G +W++ G K+N F DFIA AE LIK + EKL I+
Sbjct: 446 WLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQ 505
Query: 348 GRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEF 406
G S GGLL+GA L RP+LF AAV VP +D ML + + W E+G+P E
Sbjct: 506 GGSNGGLLVGAALTQRPELFGAAVCEVPLLD----MLRYHLLTAGSSWIAEYGNPDDPED 561
Query: 407 YFYMKSYSPVDNVKA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 465
++ +YSP N+K Q YP L+T L+D RV + KF AKL+E+ +L + E
Sbjct: 562 RAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAP---VLLREE 618
Query: 466 LGAGHFSKSGRFERLREAAFTYTFLMRALS 495
GH + E RE A FL+R L
Sbjct: 619 TKGGHGGAAPTAEIARELADLLAFLLRTLG 648
|
Length = 648 |
| >gnl|CDD|217275 pfam02897, Peptidase_S9_N, Prolyl oligopeptidase, N-terminal beta-propeller domain | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 5e-41
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 7 PDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKIT-RFVFYLDVS 64
K W H+L QS D+ ++ E D+ + LG + S+ K+LFI+S S ++ LD++
Sbjct: 201 NQKVWRHRLGTPQSQDVLVFEEPDEPFWYLGAERSDDGKYLFISSASGTDVNELYVLDLA 260
Query: 65 KPE--ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE---TTVLI 119
+ + LR + PR GV H G+ F+ +D N L+ +++ S V++
Sbjct: 261 QEKDGPLRKVVPRFDGVYYYVEHEGDTFYF-LTNDGAPNFRLVRVDLNDPSPADWKDVIV 319
Query: 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179
HRE V L++I +F ++L + R L ++ + L G + EF+ V S+
Sbjct: 320 EHREDVLLEEITVFGNYLVLSYRRDALSRLQVFDLGGGGVLFE--------EFLPGVGSV 371
Query: 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKK 218
+ + LR+ +SS TP ++YD D+ G L K
Sbjct: 372 SSASGEYDDDELRYSFSSFLTPGTIYDLDLATGELELLK 410
|
This unusual 7-stranded beta-propeller domain protects the catalytic triad of prolyl oligopeptidase (see pfam00326), excluding larger peptides and proteins from proteolysis in the cytosol. Length = 412 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 2e-17
Identities = 90/428 (21%), Positives = 138/428 (32%), Gaps = 47/428 (10%)
Query: 59 FYLDVSKPEELRVLTPRVVGVDTAA-----------SHRGNHFFITRRSDELFNSELLAC 107
Y+ + EL LTP + A + L + EL
Sbjct: 198 LYVLIEGNGELESLTPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEV 257
Query: 108 PVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGG 167
D +S L D L +GG +R+ +G ++ L G
Sbjct: 258 DGDLSSGDDTRGAWAVEGGLDG-----DGLLFIATDGG-GSSPLFRVDDLGGGVEGLSGD 311
Query: 168 KSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFD 227
V D + YSS PP +Y YD + + L
Sbjct: 312 DGG-----VPGFDVDGRKLA-----LAYSSPTEPPEIYLYDRGEEAKLTSSNNSGLKKVK 361
Query: 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLS 287
E ++DG I +Y+ PL++Y +G +FN
Sbjct: 362 L--AEPEPVTYKSNDGETIH-GWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQV 418
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYE--NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 345
L G+ RG GR++ + G + D IA + L+K E++
Sbjct: 419 LASAGYAVLAPNYRGSTGYGREFADAIRGDWGGV--DLEDLIAAVDALVKLPLVDPERIG 476
Query: 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 405
I G S GG + + FKAAVA VD L + T L E G P ++
Sbjct: 477 ITGGSYGGYMTLLAA-TKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDR 535
Query: 406 FYFYMKSYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462
+ SP DN+K +L+ G D RV + + V L+ +++F
Sbjct: 536 --EKYEDRSPIFYADNIKT----PLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF 589
Query: 463 KCELGAGH 470
GH
Sbjct: 590 P---DEGH 594
|
Length = 620 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 505 | |||
| PRK10115 | 686 | protease 2; Provisional | 100.0 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 100.0 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 100.0 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 100.0 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 100.0 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 100.0 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 100.0 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 100.0 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.9 | |
| PRK10566 | 249 | esterase; Provisional | 99.9 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.88 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.88 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.88 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.87 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.87 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.85 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.85 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.85 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.84 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.83 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.83 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 99.82 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.81 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.81 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.8 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.8 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.79 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.77 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.76 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.76 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.75 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.74 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.73 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.7 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.7 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.7 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.7 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.69 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.68 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.67 | |
| PLN02511 | 388 | hydrolase | 99.67 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.65 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.65 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.64 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.63 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.63 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.62 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.62 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.6 | |
| PLN00021 | 313 | chlorophyllase | 99.6 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.6 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.59 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.58 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.58 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.57 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.57 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.56 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.55 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.55 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.55 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.54 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.54 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.54 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.54 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.54 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.53 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.53 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.53 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.52 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.51 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.51 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.5 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.5 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.5 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.48 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.48 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.48 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.47 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.45 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.45 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.45 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.45 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.45 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.45 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.44 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.44 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.43 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.43 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.42 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.41 | |
| PLN02578 | 354 | hydrolase | 99.41 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.4 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.39 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.39 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.39 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.37 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.36 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.35 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.34 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.33 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.32 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.32 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.31 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.31 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.3 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.29 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.29 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.29 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.28 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 99.28 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.28 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.26 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.23 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.23 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.22 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.21 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.2 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.19 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 99.18 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.15 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.14 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 99.13 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.07 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.05 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 99.05 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.04 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.03 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.01 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.01 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.0 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 98.97 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.95 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.95 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 98.92 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.88 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 98.88 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 98.87 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.86 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.86 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.85 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.84 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.77 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.74 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.73 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 98.66 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.64 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 98.61 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.61 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.6 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 98.59 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.57 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 98.56 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.55 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.54 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 98.51 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.48 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.47 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.47 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.44 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 98.42 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.38 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.35 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.33 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.32 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.32 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.26 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 98.22 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.18 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.13 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.12 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.11 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 98.06 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.01 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.0 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.99 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 97.96 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 97.92 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 97.91 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 97.9 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 97.9 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.88 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.86 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 97.83 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 97.82 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.78 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 97.71 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.7 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.66 | |
| PRK10115 | 686 | protease 2; Provisional | 97.6 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.52 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 97.51 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 97.5 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 97.49 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.47 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 97.44 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 97.41 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 97.4 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.33 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.24 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 97.22 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 97.16 | |
| KOG2139 | 445 | consensus WD40 repeat protein [General function pr | 97.15 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 97.14 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 97.12 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 97.11 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.1 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 96.96 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.95 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 96.95 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 96.93 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 96.92 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 96.88 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 96.84 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 96.82 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 96.79 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.78 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.77 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 96.69 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 96.68 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.67 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 96.58 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 96.53 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 96.53 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 96.52 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 96.5 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 96.45 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 96.42 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 96.4 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 96.39 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.37 | |
| KOG2048 | 691 | consensus WD40 repeat protein [General function pr | 96.32 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 96.22 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.21 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 96.13 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 96.1 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 96.09 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.09 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 96.06 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 96.04 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.92 | |
| PTZ00420 | 568 | coronin; Provisional | 95.91 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 95.84 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.8 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 95.67 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 95.61 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 95.61 | |
| PLN02209 | 437 | serine carboxypeptidase | 95.59 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 95.58 | |
| PTZ00421 | 493 | coronin; Provisional | 95.58 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 95.2 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 95.1 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 95.04 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 94.92 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 94.73 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 94.58 | |
| KOG4497 | 447 | consensus Uncharacterized conserved protein WDR8, | 94.53 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 94.51 | |
| PTZ00421 | 493 | coronin; Provisional | 94.36 | |
| KOG1445 | 1012 | consensus Tumor-specific antigen (contains WD repe | 94.32 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 94.21 | |
| PTZ00420 | 568 | coronin; Provisional | 94.21 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 94.19 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 94.15 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 94.14 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 94.12 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 94.08 | |
| KOG0303 | 472 | consensus Actin-binding protein Coronin, contains | 94.0 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 93.98 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 93.94 | |
| KOG2139 | 445 | consensus WD40 repeat protein [General function pr | 93.76 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 93.66 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 93.55 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 93.55 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 93.49 | |
| KOG2314 | 698 | consensus Translation initiation factor 3, subunit | 93.49 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 93.47 | |
| KOG2314 | 698 | consensus Translation initiation factor 3, subunit | 93.47 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 93.38 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 93.34 | |
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 93.31 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 93.06 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 93.02 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 92.93 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 92.84 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 92.81 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 92.65 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 92.65 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 92.61 | |
| KOG2110 | 391 | consensus Uncharacterized conserved protein, conta | 92.58 | |
| PF03088 | 89 | Str_synth: Strictosidine synthase; InterPro: IPR01 | 92.53 | |
| KOG1274 | 933 | consensus WD40 repeat protein [General function pr | 92.39 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 91.99 | |
| KOG2110 | 391 | consensus Uncharacterized conserved protein, conta | 91.97 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 91.82 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 91.45 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 91.3 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 91.27 | |
| KOG2048 | 691 | consensus WD40 repeat protein [General function pr | 91.17 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 91.16 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 90.98 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 90.95 | |
| KOG1273 | 405 | consensus WD40 repeat protein [General function pr | 90.84 | |
| KOG2315 | 566 | consensus Predicted translation initiation factor | 90.7 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 90.49 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 90.37 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 90.35 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 90.14 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 90.09 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 89.45 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 89.26 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 89.24 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 89.12 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 89.0 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 88.97 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 88.95 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 88.79 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 88.67 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 88.56 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 88.52 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 88.5 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 88.25 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 87.83 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 87.78 | |
| KOG2106 | 626 | consensus Uncharacterized conserved protein, conta | 87.62 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 87.57 | |
| KOG2394 | 636 | consensus WD40 protein DMR-N9 [General function pr | 87.46 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 87.45 | |
| PLN02454 | 414 | triacylglycerol lipase | 86.89 | |
| KOG2315 | 566 | consensus Predicted translation initiation factor | 86.67 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 86.64 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 86.31 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 86.24 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 86.18 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 86.12 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 86.02 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 85.96 | |
| KOG4497 | 447 | consensus Uncharacterized conserved protein WDR8, | 85.57 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 85.34 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 85.25 | |
| KOG1445 | 1012 | consensus Tumor-specific antigen (contains WD repe | 85.2 | |
| PLN02408 | 365 | phospholipase A1 | 85.0 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 84.52 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 84.52 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 83.79 | |
| KOG1007 | 370 | consensus WD repeat protein TSSC1, WD repeat super | 83.42 | |
| KOG0270 | 463 | consensus WD40 repeat-containing protein [Function | 83.41 | |
| PLN02571 | 413 | triacylglycerol lipase | 83.34 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 83.01 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 82.79 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 82.38 | |
| KOG1539 | 910 | consensus WD repeat protein [General function pred | 82.26 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 82.18 | |
| PLN02324 | 415 | triacylglycerol lipase | 81.94 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 81.94 | |
| KOG1920 | 1265 | consensus IkappaB kinase complex, IKAP component [ | 81.57 | |
| PLN02802 | 509 | triacylglycerol lipase | 80.94 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 80.84 | |
| PF03088 | 89 | Str_synth: Strictosidine synthase; InterPro: IPR01 | 80.51 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 80.24 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 80.21 |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-67 Score=548.20 Aligned_cols=480 Identities=43% Similarity=0.739 Sum_probs=407.3
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC--CCCceeeeeccccceeEE
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS--KPEELRVLTPRVVGVDTA 82 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~--~~~~~~~l~~~~~~~~~~ 82 (505)
.|+++||+|++||++.++++||++.++.+.+....|.||+++++.+.+...+++++++++ ++. ++++.+...+..+.
T Consensus 196 ~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ 274 (686)
T PRK10115 196 LLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAE-PFVFLPRRKDHEYS 274 (686)
T ss_pred CCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCC-ceEEEECCCCCEEE
Confidence 699999999999998889999998877777666567799999988887777889988853 343 66666666666677
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
..+.++.+|+.++. +.++.+|+.+++.+.+..+.++++..+..+.++.++++.+++..++++..+++++++. +..+.
T Consensus 275 ~~~~~~~ly~~tn~-~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~--~~~~~ 351 (686)
T PRK10115 275 LDHYQHRFYLRSNR-HGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRK--TREVI 351 (686)
T ss_pred EEeCCCEEEEEEcC-CCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCC--CCceE
Confidence 66778899999987 4678899999987433333377776677899999999999999999999999988764 32222
Q ss_pred ccCCCceeeccCCeee-ecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeee-cCCCCCCCceEEEEEEEC
Q 010654 163 SLQGGKSVEFIDPVYS-IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETV-LGGFDTNNYFTERKWASA 240 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s 240 (505)
.+.++.+... ....+.+++++.+++.++|+++|+++|.+++.+++.++ ++.. .+.+++..+.+|++++++
T Consensus 352 ------~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~~~--l~~~~~~~~~~~~~~~e~v~~~s 423 (686)
T PRK10115 352 ------GIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRV--LKQTEVPGFDAANYRSEHLWITA 423 (686)
T ss_pred ------EecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcEEE--EEecCCCCcCccccEEEEEEEEC
Confidence 2222222221 11233346778899999999999999999998876333 3332 234666678999999999
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.||.+|+++++++++. ...++.|+||++|||++.+..+.|+...+.|+++||+|+.+|+|||++||++|++++...++.
T Consensus 424 ~DG~~Ip~~l~~~~~~-~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 424 RDGVEVPVSLVYHRKH-FRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCEEEEEEEEECCC-CCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 9999999998998865 445678999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
++++|+++|+++|++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+.+++.++..++...++.+||+
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~ 582 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGN 582 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887777877777789999
Q ss_pred CCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH
Q 010654 401 PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 480 (505)
Q Consensus 401 ~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 480 (505)
|.+++.+++++++||+++++++++|++||+||.+|++||++|+.+|+++|+++++++++++|..++++||+...++...+
T Consensus 583 p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~ 662 (686)
T PRK10115 583 PQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSY 662 (686)
T ss_pred CCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHH
Confidence 98888888999999999999999998889999999999999999999999999999999999776689999888888899
Q ss_pred HHHHHHHHHHHHhhCCC
Q 010654 481 REAAFTYTFLMRALSML 497 (505)
Q Consensus 481 ~~~~~~~~fl~~~l~~~ 497 (505)
++.+.+++|+...++..
T Consensus 663 ~~~A~~~aFl~~~~~~~ 679 (686)
T PRK10115 663 EGVAMEYAFLIALAQGT 679 (686)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999998754
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-68 Score=515.34 Aligned_cols=485 Identities=52% Similarity=0.908 Sum_probs=449.4
Q ss_pred CCCCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccce
Q 010654 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV 79 (505)
Q Consensus 1 ~~~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~ 79 (505)
.|+.+||++||+|.+||++.++++||+++++.|++++.-|.+.++|++..+++.++++++++.+.+. +++++.++..|.
T Consensus 193 ~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~ 272 (682)
T COG1770 193 LDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGV 272 (682)
T ss_pred EcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCc
Confidence 3788999999999999988899999999999999999999999999999999999999999999887 678888998899
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
.|...+-|..+++.+|.++ .+.+|+..++ .+....| ++++..+..+.++....+++++..++++.+++++.+....
T Consensus 273 eY~~eh~~d~f~i~sN~~g-knf~l~~ap~-~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~ 350 (682)
T COG1770 273 EYSVEHGGDRFYILSNADG-KNFKLVRAPV-SADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTG 350 (682)
T ss_pred EEeeeecCcEEEEEecCCC-cceEEEEccC-CCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCC
Confidence 9999999999999999866 7789999998 4466677 8999999999999999999999999999999998887642
Q ss_pred CCcccccCCCceeeccCCeeeec-CCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSID-PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERK 236 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (505)
+. ..+.|++..++.. ..+..+++..+.+.++|.++|.++|.+|+.+++.++++..+..+.+++..+.++++
T Consensus 351 ~~--------~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~ri 422 (682)
T COG1770 351 EE--------RGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRI 422 (682)
T ss_pred ce--------eeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEE
Confidence 22 3477777766532 34556788999999999999999999999999988888777777799999999999
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
+.+..||.+||..|++.++. +..++.|++|+.||.++....+.|+.....|++|||+..+++.||+|+.|..|+++++.
T Consensus 423 wa~a~dgv~VPVSLvyrkd~-~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~ 501 (682)
T COG1770 423 WATADDGVQVPVSLVYRKDT-KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKL 501 (682)
T ss_pred EEEcCCCcEeeEEEEEeccc-CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhh
Confidence 99999999999999999987 77889999999999999999999998888999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
..+.+.+.|+++|+++|+++++.++++|+++|+|+||.++.+++.+.|++|+++|+.+|+.|.+..|+++++|++..+|.
T Consensus 502 l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~ 581 (682)
T COG1770 502 LNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWD 581 (682)
T ss_pred hhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
|||+|.+++.|++|+++||+.|+....+|++|++.|..|++|..++..++.++|+..+.....+++..++.+||++..++
T Consensus 582 EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgR 661 (682)
T COG1770 582 EWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGR 661 (682)
T ss_pred hhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999998888899999889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCC
Q 010654 477 FERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~~ 496 (505)
.+.+++.+..++|+.+.++.
T Consensus 662 f~~lee~A~eYaF~l~~~~~ 681 (682)
T COG1770 662 FQRLEEIAFEYAFLLKLAGT 681 (682)
T ss_pred hHHHHHHHHHHHHHhhhccC
Confidence 99999999999999887653
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-59 Score=450.85 Aligned_cols=487 Identities=45% Similarity=0.721 Sum_probs=400.6
Q ss_pred CCCCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecccc---ceEEEEEeCCCCC-ceee-eecc
Q 010654 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI---TRFVFYLDVSKPE-ELRV-LTPR 75 (505)
Q Consensus 1 ~~~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~---~~~l~~~d~~~~~-~~~~-l~~~ 75 (505)
+|+.+||++||+|.+||.|.++++++++.++.+.....-..|++++.+.+.+.+ .+.+|.+|+.... -++. +.++
T Consensus 202 ~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~~~vf~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~~~~ 281 (712)
T KOG2237|consen 202 EDENNRPHKVYYHTLGTDQSEDVLLYEEKDEPKHVFISETKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLILPR 281 (712)
T ss_pred eccccCcceEEEEecccCCCcceEEEecCCCCeEEEEEEEecCceEEEEEeeccCCccceEEEEecccccCCcchheeec
Confidence 478999999999999999999999999998877765555666666566654443 4699999988765 2342 5566
Q ss_pred ccceeEE------eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCee
Q 010654 76 VVGVDTA------ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQ 147 (505)
Q Consensus 76 ~~~~~~~------~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~ 147 (505)
..+++++ +..++..++|.++. ..+++.+.++++..+.+..| ++.++....+..++..++.+++........
T Consensus 282 v~~v~~f~eh~~fi~~~~t~~~~~tn~-~~p~y~l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~ 360 (712)
T KOG2237|consen 282 VKGVDCFVEHYDFITNEGTEFYFLTNK-DAPNYYLLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLK 360 (712)
T ss_pred cchhhhhhhhhhheeccCcceeeeccC-CCCceeEEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCch
Confidence 6565433 56677889999887 46889999999987545567 788777767888887777655555544332
Q ss_pred EEE-EEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE---EEEEEeeec
Q 010654 148 KIT-TYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS---VLKKIETVL 223 (505)
Q Consensus 148 ~l~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~ 223 (505)
.+. +.+.- .|. ....||-+.+++.+....++++.+.|..+|+.+|+.+|.+|+.++.. .+...+...
T Consensus 361 ~i~q~~~~l-~g~--------~~~~fpLpv~sv~~~~g~~~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~l 431 (712)
T KOG2237|consen 361 HILQVRDLL-DGS--------LLRSFPLPVGSVSGTSGDFKSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVL 431 (712)
T ss_pred hhccccccc-cCc--------eeeeecCCCCcccccccCCCCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeecccc
Confidence 221 11111 122 23345555556555555778899999999999999999999998842 233444445
Q ss_pred CCCCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC
Q 010654 224 GGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 224 ~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 303 (505)
+.++.+.+.+++++++|.||+.||.++++.+.. +..++.|++|+.|||++....+.|......|.++|++.+.+|.||+
T Consensus 432 pg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~-k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG 510 (712)
T KOG2237|consen 432 PGFDASDYVVERIEVSSKDGTKVPMFIVYKKDI-KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG 510 (712)
T ss_pred CcccccceEEEEEEEecCCCCccceEEEEechh-hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC
Confidence 678888999999999999999999999997776 7778999999999999999999999888889999999999999999
Q ss_pred CCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 304 GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
|++|..|++.|....+++.++|+++|++||++++++.|+++++.|+|+||.++++++.++||+|+|+++.+|+.|++.++
T Consensus 511 Ge~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~ 590 (712)
T KOG2237|consen 511 GEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTH 590 (712)
T ss_pred cccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC----C
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD----N 458 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~----~ 458 (505)
..+..|++..+|.++|+|++.+.+..++.++|++++++.. +|.+|+..+.+|+||++.++.++.++|+.+-... +
T Consensus 591 ~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~ 670 (712)
T KOG2237|consen 591 KDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTN 670 (712)
T ss_pred ccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCC
Confidence 9989999888999999997766666666677777776665 9999999999999999999999999999875433 4
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 459 ILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 459 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
.+++..+.++||+...++..++++.+..++||.+.++..+
T Consensus 671 pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~~~ 710 (712)
T KOG2237|consen 671 PVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNSDW 710 (712)
T ss_pred CEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcCcc
Confidence 4888888899999988899999999999999999987654
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=395.22 Aligned_cols=358 Identities=37% Similarity=0.550 Sum_probs=311.3
Q ss_pred EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 118 LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 118 ~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
++.+.....+..+.+.+++++.....|.+.++.++... +... +++.+|.+. .+...+.+.+++.+++..++
T Consensus 290 ~~~P~~~~~le~v~tt~~~~va~~l~nv~~~l~v~~~~--g~~~------~~v~l~~~g-a~~~~~~~~~g~ev~l~~t~ 360 (648)
T COG1505 290 EFIPEEEQSLEQVVTTKDKLVAGTLDNVSGRLEVYDLK--GERI------EEVELPPPG-ALGMGSADKDGDEVFLAFTS 360 (648)
T ss_pred EecCCcccceeeeEEEcCeEEeeeehhccceEEEeccC--ceEe------eecccCCcc-ceeeccCCCCCcEEEEEeec
Confidence 67777777899999999999999999988888888765 4332 345555543 22222445678999999999
Q ss_pred CCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC
Q 010654 198 LRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN 277 (505)
Q Consensus 198 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~ 277 (505)
+++|+.+|+++..+++.++ +....-.++++.+.+|+...+|.||++||.++++ ++. +.+ +.|++|+.|||+....
T Consensus 361 F~tP~~~~r~~~~~~eLe~--ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-~~d-~~pTll~aYGGF~vsl 435 (648)
T COG1505 361 FTTPSTLYRLDLFGGELEV--IREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-KKD-ENPTLLYAYGGFNISL 435 (648)
T ss_pred ccCCCceEEEecCCceehh--hhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCC-cCC-CCceEEEecccccccc
Confidence 9999999999998877333 3333346889999999999999999999999998 776 555 8999999999999999
Q ss_pred CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHH
Q 010654 278 DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357 (505)
Q Consensus 278 ~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~ 357 (505)
.+.|+.....|.++|.+.+++|.||+|+||.+||+++.+..+++.++|+.++++.|+++++..|+++||.|+|.||.++.
T Consensus 436 tP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg 515 (648)
T COG1505 436 TPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVG 515 (648)
T ss_pred CCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEE
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC-CCCCeEEEEccCCCC
Q 010654 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA-QNYPHILVTAGLNDP 436 (505)
Q Consensus 358 ~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~-~~~Pp~Li~~G~~D~ 436 (505)
.+++++|++|.|+|+.+|++||+++. .++....+..|||+|.+|+.+.+|.++||++|++. .++||+||..+..|+
T Consensus 516 ~alTQrPelfgA~v~evPllDMlRYh---~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DD 592 (648)
T COG1505 516 AALTQRPELFGAAVCEVPLLDMLRYH---LLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDD 592 (648)
T ss_pred eeeccChhhhCceeeccchhhhhhhc---ccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccc
Confidence 99999999999999999999999874 33333333489999999999999999999999998 599999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 437 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
||+|.|+++|+.+|++++.++ +|..+.++||+...+..+..++.+.++.||.+.|+
T Consensus 593 RVHPaHarKfaa~L~e~~~pv---~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 593 RVHPAHARKFAAKLQEVGAPV---LLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred cccchHHHHHHHHHHhcCCce---EEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999664 45555589999888777778888999999999874
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-48 Score=399.99 Aligned_cols=434 Identities=20% Similarity=0.211 Sum_probs=312.8
Q ss_pred EEEEEeCCCcEEEEEecccc----ceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCC---CCCceEEE
Q 010654 35 LGLQASESKKFLFIASESKI----TRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDE---LFNSELLA 106 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~----~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~---~~~~~l~~ 106 (505)
..+.+.+|++.++....... ....++....++. +..+++...+.. ..+.++|+.+++..+... .....+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~ 249 (620)
T COG1506 171 VSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGE-LESLTPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILL 249 (620)
T ss_pred eeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCc-eEEEcCCCceeeeeeeCCCCCeeEEeccCCccCccccceEEE
Confidence 35566777777666544331 2334444444554 667666543332 348999999999887643 23456666
Q ss_pred eeCCCCCCceEEEcCC---CC-ceeeEEEEeCCEEEEEEec-CCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 107 CPVDNTSETTVLIPHR---ES-VKLQDIQLFIDHLAVYERE-GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~---~~-~~i~~~~~~~d~l~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
++.+. ++..-.+... .. ..+.. ...++.+++++.. .+.. .++.+...+... .... .....+.
T Consensus 250 ~~~~~-~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~--~l~~~~~~~~~~------~~~~--~~~~~v~- 316 (620)
T COG1506 250 LDGEL-GEVDGDLSSGDDTRGAWAVEG-GLDGDGLLFIATDGGGSS--PLFRVDDLGGGV------EGLS--GDDGGVP- 316 (620)
T ss_pred Eeccc-cccceeeccCCcccCcHHhcc-ccCCCcEEEEEecCCCce--EEEEEeccCCce------eeec--CCCceEE-
Confidence 66222 2221111111 00 01111 1445677777766 4433 344443212111 1111 1111222
Q ss_pred CCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCC-CCCceEEEEEEECCCCceeeEEEEEeCCccCCC
Q 010654 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFD-TNNYFTERKWASASDGTQIPICIVYRKNLVKLD 260 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~ 260 (505)
.++.+++.+++..+++..|+++|+++. +.+.+++... ...+. .....+|.+++++.||.+|+++++.|+++ ++.
T Consensus 317 -~f~~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~-~~~ 391 (620)
T COG1506 317 -GFDVDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSSN--NSGLKKVKLAEPEPVTYKSNDGETIHGWLYKPPGF-DPR 391 (620)
T ss_pred -EEeeCCCEEEEEecCCCCccceEEEcC-CCceEEeecc--cccccccccCCceEEEEEcCCCCEEEEEEecCCCC-CCC
Confidence 234488999999999999999999986 3332232211 11222 23458899999999999999999999998 777
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+++|+||++||||..+....|....|.|+++||+|+.+|+|||+|||++|.++..+.++..+++|++++++++.+.+.+|
T Consensus 392 k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 471 (620)
T COG1506 392 KKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVD 471 (620)
T ss_pred CCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcC
Confidence 88999999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCC-CHHHHHHHHhCChhhcc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW-KEEFYFYMKSYSPVDNV 419 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~sp~~~~ 419 (505)
++||+|+|+||||||+++++++.| +|+|+++.++.+++..++...+..+........+.+. +.+ .+.+.||+.++
T Consensus 472 ~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~sp~~~~ 547 (620)
T COG1506 472 PERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDRE---KYEDRSPIFYA 547 (620)
T ss_pred hHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcccChH---HHHhcChhhhh
Confidence 999999999999999999999866 9999999999999887765544432221111122232 333 34789999999
Q ss_pred cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 420 ~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+++++| +|||||++|.+||++|+++|+++|+.+|+++++++|| +++|++... ......+..+++||.++++.
T Consensus 548 ~~i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p---~e~H~~~~~-~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 548 DNIKTP-LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP---DEGHGFSRP-ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred cccCCC-EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC---CCCcCCCCc-hhHHHHHHHHHHHHHHHhcC
Confidence 999998 9999999999999999999999999999999999999 779987652 33455666799999999874
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=282.21 Aligned_cols=330 Identities=20% Similarity=0.243 Sum_probs=245.8
Q ss_pred EEEEEEecCCeeE--EEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 136 HLAVYEREGGLQK--ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 136 ~l~~~~~~~~~~~--l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
-++|..++++... +++......|. +. .++++.++.. ..++-+=+.++..+++...|+.+..+.+..++
T Consensus 517 LVYf~gt~d~PlE~hLyvvsye~~g~-~~--------rlt~~g~sh~-~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~ 586 (867)
T KOG2281|consen 517 LVYFVGTKDTPLEHHLYVVSYENPGE-IA--------RLTEPGYSHS-CELDQQCDHFVSYYSSVGSPPCVSLYSLSWPE 586 (867)
T ss_pred EEEEEccCCCCceeeEEEEEEecCCc-ee--------eccCCCcccc-hhhhhhhhhHhhhhhcCCCCceEEEEeccCCc
Confidence 4566677777554 55555442122 32 3334444432 12232333477888999999988887776654
Q ss_pred EE--EEEEe---eec-CCCCCCCc-eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCc---
Q 010654 214 SV--LKKIE---TVL-GGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFN--- 282 (505)
Q Consensus 214 ~~--~~~~~---~~~-~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~--- 282 (505)
-. .++.. -.. ....+..+ .+|.+.|.+..|..+.+.++.|.++ ++++|+|+++++||||+.+.. ..|.
T Consensus 587 ~~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-~pgkkYptvl~VYGGP~VQlVnnsfkgi~ 665 (867)
T KOG2281|consen 587 NDPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-QPGKKYPTVLNVYGGPGVQLVNNSFKGIQ 665 (867)
T ss_pred cCcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccC-CCCCCCceEEEEcCCCceEEeecccccee
Confidence 11 11111 011 12233344 5688899999999999999999998 999999999999999987642 2332
Q ss_pred -hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHH
Q 010654 283 -SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 283 -~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
...+.|+++||+|+.+|-|||...|.+|....+...|..+++|...++++|+++ |++|++||+|.|||||||+++..+
T Consensus 666 ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L 745 (867)
T KOG2281|consen 666 YLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGL 745 (867)
T ss_pred hhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHh
Confidence 235789999999999999999999999998888999999999999999999998 599999999999999999999999
Q ss_pred hhCCCceeEEEecCCchhhhhhccCCCCCCCcccc-c-ccCCCC-CHHHHHHHHhCChhhcccCC-CCC-eEEEEccCCC
Q 010654 361 NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW-E-EWGDPW-KEEFYFYMKSYSPVDNVKAQ-NYP-HILVTAGLND 435 (505)
Q Consensus 361 ~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~-~~g~~~-~~~~~~~~~~~sp~~~~~~~-~~P-p~Li~~G~~D 435 (505)
+++|+.|+++|+.+|+++|.-+ +. .| + .+|.|+ ++..| .+-|-..++.++ .-| .+|++||.-|
T Consensus 746 ~~~P~IfrvAIAGapVT~W~~Y--DT-------gYTERYMg~P~~nE~gY---~agSV~~~VeklpdepnRLlLvHGliD 813 (867)
T KOG2281|consen 746 AQYPNIFRVAIAGAPVTDWRLY--DT-------GYTERYMGYPDNNEHGY---GAGSVAGHVEKLPDEPNRLLLVHGLID 813 (867)
T ss_pred hcCcceeeEEeccCcceeeeee--cc-------cchhhhcCCCccchhcc---cchhHHHHHhhCCCCCceEEEEecccc
Confidence 9999999999999999998643 21 12 2 247784 44444 455777777776 333 4999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.+|++.+.-.+..+|.++|++.++++|| ++.|+...... ....-++++.|+.+
T Consensus 814 ENVHF~Hts~Lvs~lvkagKpyeL~IfP---~ERHsiR~~es-~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 814 ENVHFAHTSRLVSALVKAGKPYELQIFP---NERHSIRNPES-GIYYEARLLHFLQE 866 (867)
T ss_pred cchhhhhHHHHHHHHHhCCCceEEEEcc---ccccccCCCcc-chhHHHHHHHHHhh
Confidence 9999999999999999999999999999 66998754332 22233467888865
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=272.09 Aligned_cols=209 Identities=32% Similarity=0.460 Sum_probs=170.3
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 010654 279 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358 (505)
Q Consensus 279 ~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~ 358 (505)
+.|+...+.|+++||+|+.+|+||++++|.+|...+...++..+++|+.+++++|++++.+|++||+|+|+|+||++++.
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 35777788999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCC-CCHHHHHHHHhCChhhcccC--CCCCeEEEEccCCC
Q 010654 359 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP-WKEEFYFYMKSYSPVDNVKA--QNYPHILVTAGLND 435 (505)
Q Consensus 359 ~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~sp~~~~~~--~~~Pp~Li~~G~~D 435 (505)
++.++|++|+++++.+|++|+......... +....+.+++.+ ..++.+.. .+|+..+.+ ++.| +||+||++|
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~~~~~P-~li~hG~~D 155 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLFSYYGTTDI-YTKAEYLEYGDPWDNPEFYRE---LSPISPADNVQIKPP-VLIIHGEND 155 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTTCSBHHTCC-HHHGHHHHHSSTTTSHHHHHH---HHHGGGGGGCGGGSE-EEEEEETTB
T ss_pred hhcccceeeeeeeccceecchhcccccccc-cccccccccCccchhhhhhhh---hccccccccccCCCC-EEEEccCCC
Confidence 999999999999999999998766543222 112133456666 46665544 456666666 5665 999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
.+||+.++.+++++|+++|+++++++|| ++||++..... ..+...++++||+++|+.
T Consensus 156 ~~Vp~~~s~~~~~~L~~~g~~~~~~~~p---~~gH~~~~~~~-~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 156 PRVPPSQSLRLYNALRKAGKPVELLIFP---GEGHGFGNPEN-RRDWYERILDFFDKYLKK 212 (213)
T ss_dssp SSSTTHHHHHHHHHHHHTTSSEEEEEET---T-SSSTTSHHH-HHHHHHHHHHHHHHHTT-
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcC---cCCCCCCCchh-HHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999 78997764433 335677899999999974
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=286.35 Aligned_cols=391 Identities=18% Similarity=0.189 Sum_probs=262.6
Q ss_pred eeeeCCEE-EEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCc-eeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 83 ASHRGNHF-FITRRSDELFNSELLACPVDNTSETTVLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 83 ~s~dg~~l-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
++.|+.+. ++....++. -.++..+..........+....++. .|..+.-..+.++|.+...+..+..+|.+++....
T Consensus 347 ~~~d~~~~~~~~~~~~~~-~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~ 425 (755)
T KOG2100|consen 347 FSSDGSSYLKVDSVSDGG-YNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSGT 425 (755)
T ss_pred EeecCCceeEEEeeccCC-EEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEccccc
Confidence 66676443 433433322 3466666665422222222222221 12222212347888888765666666666554444
Q ss_pred ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEE-EEECCCCcEEEEEEee--e-cCCCCCCCc-eEEE
Q 010654 161 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVY-DYDMDMGISVLKKIET--V-LGGFDTNNY-FTER 235 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~--~-~~~~~~~~~-~~~~ 235 (505)
...+++.. .+ . ...+-..+++.....++..++.|..|...+ +.+... ......+.. . ...+....+ ..+.
T Consensus 426 ~~~lt~~~-~~--~-~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~-~~~~~~Le~n~~~~~~~~~~~~p~~~~ 500 (755)
T KOG2100|consen 426 VESLTCSL-IT--G-PCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKN-SKTIVVLETNEELKKTIENVALPIVEF 500 (755)
T ss_pred cccccccC-CC--C-cceEEEEecCCcccEEEEEccCCCCCcceeecccccc-ceEEEEeccChhhHHHhhcccCCccee
Confidence 44444321 11 1 111112344556778888888888885412 111111 111222211 1 111111122 1222
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CC--chhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~--~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
..+.. ||....+.++.|+++ .+.+++|++|.+||||+++... .| +.....+..+|++|+.+|+||+|++|.+++.
T Consensus 501 ~~i~~-~~~~~~~~~~lP~~~-~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 501 GKIEI-DGITANAILILPPNF-DPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred EEEEe-ccEEEEEEEecCCCC-CCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH
Confidence 22333 889999999999999 8888999999999999854322 12 2233567789999999999999999999999
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC-CceeEEEecCCchhhhhhccCCCCCCC
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP-DLFKAAVAAVPFVDVLTTMLDPTIPLT 391 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p-~~~~a~v~~~~~~d~~~~~~~~~~~~~ 391 (505)
+..+.+|..+++|...+++++.+++++|++||+|+|+|||||+++.++..++ +.|+|+++.+|++||. + .+...
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~-yds~~--- 653 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-Y-YDSTY--- 653 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-e-ecccc---
Confidence 9999999999999999999999999999999999999999999999999887 8999999999999987 3 33221
Q ss_pred cccccc-cCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 392 TAEWEE-WGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 392 ~~~~~~-~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
-++ +|.| .+...| .+.++..++..++.|.+|++||+.|.+|+++|+.+++++|+.+|+++++++|| ++.
T Consensus 654 ---terymg~p~~~~~~y---~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vyp---de~ 724 (755)
T KOG2100|consen 654 ---TERYMGLPSENDKGY---EESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYP---DEN 724 (755)
T ss_pred ---cHhhcCCCccccchh---hhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeC---CCC
Confidence 122 3666 333334 56788888888888867999999999999999999999999999999999999 669
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|++..... ....+..+..||..+++.
T Consensus 725 H~is~~~~-~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 725 HGISYVEV-ISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred cccccccc-hHHHHHHHHHHHHHHcCc
Confidence 98765331 122334578899976654
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=185.87 Aligned_cols=226 Identities=16% Similarity=0.119 Sum_probs=157.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC-CCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~g~~~ 310 (505)
.+....+.+.||..|.+|+..|++. ...+.|+||++||-.... ..|.....+|+++||+|+.+|.||+ |+++.++
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 3344456788999999998888643 246779999999965543 2255667899999999999999887 7776666
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCC---
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT--- 387 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~--- 387 (505)
..... .....|+.++++|+.+++ .++|+++|+|+||.++..++.. + ..+++|+.+|+.++...+....
T Consensus 84 ~~~t~----s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~-~-~v~~lI~~sp~~~l~d~l~~~~~~~ 154 (307)
T PRK13604 84 DEFTM----SIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINE-I-DLSFLITAVGVVNLRDTLERALGYD 154 (307)
T ss_pred ccCcc----cccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcC-C-CCCEEEEcCCcccHHHHHHHhhhcc
Confidence 43211 123699999999998863 4689999999999998666663 3 4899999999998654432100
Q ss_pred ---CCCCcc-ccccc-CCCC-CHHHHHHHH------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCC
Q 010654 388 ---IPLTTA-EWEEW-GDPW-KEEFYFYMK------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT 455 (505)
Q Consensus 388 ---~~~~~~-~~~~~-g~~~-~~~~~~~~~------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~ 455 (505)
++.... ....+ |..- ......... ..+|+..+++++.| +|+|||.+|..||++++++++++++. .
T Consensus 155 ~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~P-vLiIHG~~D~lVp~~~s~~l~e~~~s--~ 231 (307)
T PRK13604 155 YLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIP-FIAFTANNDSWVKQSEVIDLLDSIRS--E 231 (307)
T ss_pred cccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCC-EEEEEcCCCCccCHHHHHHHHHHhcc--C
Confidence 010000 00001 1111 011111111 24566778888887 99999999999999999999998764 3
Q ss_pred CCCeEEEEecCCCCCCCCCCh
Q 010654 456 DDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~~~~ 476 (505)
+.+++.++ |+.|.+.++.
T Consensus 232 ~kkl~~i~---Ga~H~l~~~~ 249 (307)
T PRK13604 232 QCKLYSLI---GSSHDLGENL 249 (307)
T ss_pred CcEEEEeC---CCccccCcch
Confidence 56788888 9999887653
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=187.97 Aligned_cols=231 Identities=16% Similarity=0.162 Sum_probs=149.9
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC-chhHHHcccc--cCCcc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGKF--LKKKN 321 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~-g~~~~~~~~~--~~~~~ 321 (505)
.+....+.|++. .+++.|+||++||.++... .|......|+++||.|+.+|+||+|.. +......... .....
T Consensus 11 ~~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK10566 11 GIEVLHAFPAGQ--RDTPLPTVFFYHGFTSSKL--VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQ 86 (249)
T ss_pred CcceEEEcCCCC--CCCCCCEEEEeCCCCcccc--hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHH
Confidence 344555667642 3456899999999866542 355567889999999999999998742 1100000000 00113
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEE-ecCCchhhhhh-ccCCCCCCCcccccccC
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV-AAVPFVDVLTT-MLDPTIPLTTAEWEEWG 399 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v-~~~~~~d~~~~-~~~~~~~~~~~~~~~~g 399 (505)
.++|+.++++++.+++.+|++||+++|+|+||++++.++.++|+...+++ ..++....... ...... . .. ...
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~-~~~ 161 (249)
T PRK10566 87 NMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLI-P---ET-AAQ 161 (249)
T ss_pred HHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhccccc-c---cc-ccc
Confidence 46888889999999888999999999999999999999998886543332 22332221111 000000 0 00 000
Q ss_pred CCCCHHHHHHHHhCChhhcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC--CCeEEEEecCCCCCCCCCCh
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD--DNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~--~~~~~~~~~~~~gH~~~~~~ 476 (505)
.....+.+..+..+++...+.++ ++| +|++||++|..||+.++++++++|+.+|.+ ++++.|+ +.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~---~~~H~~~--- 234 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQLADRP-LLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEP---GVRHRIT--- 234 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhhcCCCC-EEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecC---CCCCccC---
Confidence 00011112223445665666666 677 999999999999999999999999999875 5667777 8899763
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 010654 477 FERLREAAFTYTFLMRAL 494 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l 494 (505)
.. .+..+.+||+++|
T Consensus 235 ~~---~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 PE---ALDAGVAFFRQHL 249 (249)
T ss_pred HH---HHHHHHHHHHhhC
Confidence 22 3456899999875
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-21 Score=189.99 Aligned_cols=240 Identities=17% Similarity=0.121 Sum_probs=156.8
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+.+.++..||..|+++++.|+. .++.|+||+. ||.++.....|......|+++||+|+.+|+||.|....
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~----~~~~P~Vli~-gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG----DGPFPTVLVC-GGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC----CCCccEEEEe-CCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 44678999999999899999988873 2567887765 44444333335555678999999999999999876532
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc--CCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML--DPT 387 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~--~~~ 387 (505)
+ ...........+++++|.+.+.+|++||+++|+|+||++++.++..+|++++++|+..|+.+...... ...
T Consensus 239 ~------~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 W------KLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred C------CccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 1 00111222335788999999999999999999999999999999888999999999988765211000 001
Q ss_pred CCCCcc-cc-cccCCC-CC-HHHHHHHHhCChh--hc-ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 388 IPLTTA-EW-EEWGDP-WK-EEFYFYMKSYSPV--DN-VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 388 ~~~~~~-~~-~~~g~~-~~-~~~~~~~~~~sp~--~~-~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
.+.... .+ ..+|.+ .+ ......+..++.. .. ..++++| +|++||++|++||+++++.+.+... +.+++
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~P-vLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~ 387 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTP-MLSGYWKNDPFSPEEDSRLIASSSA----DGKLL 387 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCc-EEEEecCCCCCCCHHHHHHHHHhCC----CCeEE
Confidence 110000 00 112332 12 2222233333321 11 2467888 9999999999999999987765443 45678
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
.++ +. |.. .. +. ..+..+.+||.++|
T Consensus 388 ~i~---~~-~~~-e~-~~--~~~~~i~~wL~~~l 413 (414)
T PRK05077 388 EIP---FK-PVY-RN-FD--KALQEISDWLEDRL 413 (414)
T ss_pred Ecc---CC-Ccc-CC-HH--HHHHHHHHHHHHHh
Confidence 888 43 322 22 22 23445899999876
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-22 Score=187.10 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=163.1
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+....+.|.+.+|..|.++++.|++. .++.|+||..||..+.... + .....|+.+||+|+.+|.||.++...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~~--~-~~~~~~a~~G~~vl~~d~rGqg~~~~ 125 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSGD--P-FDLLPWAAAGYAVLAMDVRGQGGRSP 125 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GGG--H-HHHHHHHHTT-EEEEE--TTTSSSS-
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCCC--c-ccccccccCCeEEEEecCCCCCCCCC
Confidence 3567888999999999999999999854 4789999999986544211 1 12346899999999999999985433
Q ss_pred hHHHc------ccccCC----------cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 309 QWYEN------GKFLKK----------KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 309 ~~~~~------~~~~~~----------~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
+.... +....+ ...+.|+..++++|.+++.+|++||+++|.|.||.+++.+++..+ +++++++
T Consensus 126 d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~ 204 (320)
T PF05448_consen 126 DYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAA 204 (320)
T ss_dssp B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEE
T ss_pred CccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEe
Confidence 32110 010111 135799999999999999999999999999999999999999865 7999999
Q ss_pred cCCc-hhhhhhccCC--CCCCCc-ccccccCCC---CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 373 AVPF-VDVLTTMLDP--TIPLTT-AEWEEWGDP---WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 373 ~~~~-~d~~~~~~~~--~~~~~~-~~~~~~g~~---~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
..|+ .|+...+... ..+... ..|..+.++ ..++.++.+.-++..+.+++|++| +|+..|-.|+.|||.....
T Consensus 205 ~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~p-vl~~~gl~D~~cPP~t~fA 283 (320)
T PF05448_consen 205 DVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCP-VLFSVGLQDPVCPPSTQFA 283 (320)
T ss_dssp ESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SE-EEEEEETT-SSS-HHHHHH
T ss_pred cCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCC-EEEEEecCCCCCCchhHHH
Confidence 9885 4543332111 111111 112222222 356677888889999999999998 9999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.+++|.. +.++++|| ..||.... .. .....+.||.+|
T Consensus 284 ~yN~i~~---~K~l~vyp---~~~He~~~---~~--~~~~~~~~l~~~ 320 (320)
T PF05448_consen 284 AYNAIPG---PKELVVYP---EYGHEYGP---EF--QEDKQLNFLKEH 320 (320)
T ss_dssp HHCC--S---SEEEEEET---T--SSTTH---HH--HHHHHHHHHHH-
T ss_pred HHhccCC---CeeEEecc---CcCCCchh---hH--HHHHHHHHHhcC
Confidence 9999864 45789998 67886431 11 112468898765
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-21 Score=185.41 Aligned_cols=257 Identities=12% Similarity=0.072 Sum_probs=165.1
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+...+.+.||.+|++....|++. ....|+||++||..... ...|......|+++||.|+.+|+||+|.+...
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~ 104 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL 104 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 345566678889999999876666542 23568999999985432 33344445678899999999999999876421
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc-----
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML----- 384 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----- 384 (505)
. +.........+|+.++++++......+..++.|+|+|+||.+++.++.++|++++++|+.+|..+....+.
T Consensus 105 ~---~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 181 (330)
T PLN02298 105 R---AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPI 181 (330)
T ss_pred c---ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHH
Confidence 0 11112224578999999999876444456799999999999999999999999999999888653211100
Q ss_pred -------CCCCCCCc--ccccccCC-CCCHHHHHHHHhCC----------------------hhhcccCCCCCeEEEEcc
Q 010654 385 -------DPTIPLTT--AEWEEWGD-PWKEEFYFYMKSYS----------------------PVDNVKAQNYPHILVTAG 432 (505)
Q Consensus 385 -------~~~~~~~~--~~~~~~g~-~~~~~~~~~~~~~s----------------------p~~~~~~~~~Pp~Li~~G 432 (505)
....+... ........ ...+. ...+...+ ....+.++++| +||+||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G 259 (330)
T PLN02298 182 PQILTFVARFLPTLAIVPTADLLEKSVKVPA-KKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP-FIVLHG 259 (330)
T ss_pred HHHHHHHHHHCCCCccccCCCcccccccCHH-HHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC-EEEEec
Confidence 00000000 00000000 00000 00000011 12345677887 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH--HHHHHHHHHHHHHhhCCCCCC
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER--LREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~--~~~~~~~~~fl~~~l~~~~~~ 500 (505)
++|..||+.+++++++++...+ .++++|+ +++|......+.. ......+.+||.++++....+
T Consensus 260 ~~D~ivp~~~~~~l~~~i~~~~--~~l~~~~---~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 260 SADVVTDPDVSRALYEEAKSED--KTIKIYD---GMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred CCCCCCCHHHHHHHHHHhccCC--ceEEEcC---CcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999998876433 4678887 8899764333322 222445899999999765443
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-21 Score=180.09 Aligned_cols=245 Identities=16% Similarity=0.123 Sum_probs=154.9
Q ss_pred ceEEEEEEEC-CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCC---
Q 010654 231 YFTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGE--- 305 (505)
Q Consensus 231 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~--- 305 (505)
...+.+++.| .-|..+++.+++|+. ..++++|+|+++||+++......... ..+.+...|++|++||..++|.
T Consensus 16 ~~~~~~~~~s~~l~~~~~~~vy~P~~--~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~ 93 (283)
T PLN02442 16 GFNRRYKHFSSTLGCSMTFSVYFPPA--SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVE 93 (283)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCc--ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCC
Confidence 3455666655 356789999999984 34568999999999876543322212 2245566799999999765441
Q ss_pred ---------CchhHH-HcccccCCc-----chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEE
Q 010654 306 ---------LGRQWY-ENGKFLKKK-----NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 370 (505)
Q Consensus 306 ---------~g~~~~-~~~~~~~~~-----~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~ 370 (505)
++..+. +.....++. ...+++...++... ..+|+++++|+|+|+||++++.++.++|++|+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~ 171 (283)
T PLN02442 94 GEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSV 171 (283)
T ss_pred CCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEE
Confidence 111111 111111111 12233333333322 2368899999999999999999999999999999
Q ss_pred EecCCchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCC-hHHHHHH
Q 010654 371 VAAVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-EPAKFVA 448 (505)
Q Consensus 371 v~~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~-~~~~~~~ 448 (505)
++.+|+.++.... ...... ..+|.+ ++.++.....+|+.++...+.| +|++||++|+.|+.. ++..+++
T Consensus 172 ~~~~~~~~~~~~~------~~~~~~~~~~g~~--~~~~~~~d~~~~~~~~~~~~~p-vli~~G~~D~~v~~~~~s~~~~~ 242 (283)
T PLN02442 172 SAFAPIANPINCP------WGQKAFTNYLGSD--KADWEEYDATELVSKFNDVSAT-ILIDQGEADKFLKEQLLPENFEE 242 (283)
T ss_pred EEECCccCcccCc------hhhHHHHHHcCCC--hhhHHHcChhhhhhhccccCCC-EEEEECCCCccccccccHHHHHH
Confidence 9999998743110 000011 123433 2223223344555566556776 999999999999974 6899999
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+|+++|.++++.+++ +.+|... .....+.+.+.|..++++
T Consensus 243 ~l~~~g~~~~~~~~p---g~~H~~~----~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 243 ACKEAGAPVTLRLQP---GYDHSYF----FIATFIDDHINHHAQALK 282 (283)
T ss_pred HHHHcCCCeEEEEeC---CCCccHH----HHHHHHHHHHHHHHHHhc
Confidence 999999999999998 7799642 111222234556655553
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=176.63 Aligned_cols=243 Identities=17% Similarity=0.152 Sum_probs=156.3
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHH-HCCcEEEEEcc--cCCCCCc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQI--RGGGELG 307 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~d~--rG~~~~g 307 (505)
..+.+.+.+. -|..+++.++.|++. . .++.|+|+++||.++......+....+.++ +.|++|++||. ||++..+
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQA-A-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCc-c-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 4455555544 456788888999874 2 356899999999876554433333344555 46999999997 6665333
Q ss_pred h--hHH---------HcccccCC--cchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 308 R--QWY---------ENGKFLKK--KNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 308 ~--~~~---------~~~~~~~~--~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
. .|. +.....+. ......+...+..+++. ..+|++|++|+|+||||++++.++.++|++|+++++.
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~ 169 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAF 169 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEE
Confidence 1 111 00000111 12233344444444443 3478899999999999999999999999999999999
Q ss_pred CCchhhhhhccCCCCCCCccccc-ccCCCCCHHHHHHHHhCChhhcccCC-CCCeEEEEccCCCCCCCC-ChHHHHHHHH
Q 010654 374 VPFVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMY-SEPAKFVAKL 450 (505)
Q Consensus 374 ~~~~d~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~~~~~-~~Pp~Li~~G~~D~~vp~-~~~~~~~~~L 450 (505)
+|+.+.... +....... .++.+. +.+ ...+|...+.+. ..||+++.||+.|+.||. .++.++.++|
T Consensus 170 ~~~~~~~~~------~~~~~~~~~~l~~~~--~~~---~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l 238 (275)
T TIGR02821 170 APIVAPSRC------PWGQKAFSAYLGADE--AAW---RSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQAC 238 (275)
T ss_pred CCccCcccC------cchHHHHHHHhcccc--cch---hhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHH
Confidence 999774311 11110111 123221 111 234555444432 244699999999999999 6899999999
Q ss_pred HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 451 REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+++|+++++..++ |.+|++..- ...+...+.|+.+++
T Consensus 239 ~~~g~~v~~~~~~---g~~H~f~~~----~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 239 RAAGQALTLRRQA---GYDHSYYFI----ASFIADHLRHHAERL 275 (275)
T ss_pred HHcCCCeEEEEeC---CCCccchhH----HHhHHHHHHHHHhhC
Confidence 9999999999998 889976421 122334677777653
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-19 Score=188.90 Aligned_cols=261 Identities=16% Similarity=0.192 Sum_probs=180.0
Q ss_pred CCCCCCceEEEEEEECC-----CCc--eeeEEEEEeCCccCCCCCCcEEEEE---cCCCCcC------------C--C--
Q 010654 225 GFDTNNYFTERKWASAS-----DGT--QIPICIVYRKNLVKLDGSDPLLLYG---YGSYEIC------------N--D-- 278 (505)
Q Consensus 225 ~~~~~~~~~~~~~~~s~-----dG~--~i~~~l~~p~~~~~~~~~~P~iv~~---hGg~~~~------------~--~-- 278 (505)
-++...+..|.|++.+. ||. .|.+.|++|+.. ..+-|.|+|+-. |.|.... . .
T Consensus 162 ~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~-~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 162 VFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKET-ASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred ccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCcc-CCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 35566677888888763 564 688899999876 334478888864 3332000 0 0
Q ss_pred --------------------CC-----CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHH
Q 010654 279 --------------------PA-----FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL 333 (505)
Q Consensus 279 --------------------~~-----~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 333 (505)
.. .....++|+++||+|+++|.||.++++..+. ..+..+.+|..++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-----~~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPT-----TGDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCc-----cCCHHHHHHHHHHHHHH
Confidence 00 0123478999999999999999998877553 34457889999999999
Q ss_pred HHcC--CCC------------CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccc----
Q 010654 334 IKNC--YCT------------KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW---- 395 (505)
Q Consensus 334 ~~~~--~~d------------~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~---- 395 (505)
..+. +.| ..|||++|.||||++++.+|+..|..++|+|+.+++.+|..++...........|
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged 395 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGED 395 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcc
Confidence 9542 223 4799999999999999999998888999999999999886654321110000000
Q ss_pred ----cc--------cCCC-CCH-------------------HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChH
Q 010654 396 ----EE--------WGDP-WKE-------------------EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP 443 (505)
Q Consensus 396 ----~~--------~g~~-~~~-------------------~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~ 443 (505)
.+ .+.. ... ..-+++.+.+++.++.++++| +|++||..|.+|++.++
T Consensus 396 ~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvP-vLlIhGw~D~~V~~~~s 474 (767)
T PRK05371 396 LDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKAS-VLVVHGLNDWNVKPKQV 474 (767)
T ss_pred hhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCC-EEEEeeCCCCCCChHHH
Confidence 00 0000 000 011234566888889999998 99999999999999999
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 444 AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 444 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.+++++|++++++.++++.+ .+|..... ....+....+.+||+++|+..
T Consensus 475 ~~ly~aL~~~g~pkkL~l~~----g~H~~~~~-~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 475 YQWWDALPENGVPKKLFLHQ----GGHVYPNN-WQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred HHHHHHHHhcCCCeEEEEeC----CCccCCCc-hhHHHHHHHHHHHHHhccccC
Confidence 99999999999988876654 47854322 223333446789999998643
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=173.86 Aligned_cols=235 Identities=15% Similarity=0.105 Sum_probs=160.3
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHH-CCcEEEEEcccCCCCCch
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~ 308 (505)
...+.+.+++.+| .|++.+++|... ..|+||++|||.....+ ..+......|+. .|+.|+.+|||.+.+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~~-----~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-- 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQPD-----SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-- 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCCC-----CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC--
Confidence 3467788888888 599998888532 35999999998754333 234455667777 5999999999987642
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchhh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDV 379 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~ 379 (505)
.....++|+.++++|+.++ -.+|++||+|+|+|+||.+++.++.+. +..+++++..+|+++.
T Consensus 127 ---------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 127 ---------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ---------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 1234689999999999764 347899999999999999999888642 3568889999998874
Q ss_pred hhhc----cCCCC-CCCcccc----ccc-CCCCCHHHHHHHHhCChhhcc--cCC--CCCeEEEEccCCCCCCCCChHHH
Q 010654 380 LTTM----LDPTI-PLTTAEW----EEW-GDPWKEEFYFYMKSYSPVDNV--KAQ--NYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 380 ~~~~----~~~~~-~~~~~~~----~~~-g~~~~~~~~~~~~~~sp~~~~--~~~--~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
.... ..... .+....+ ..| +++.+ ..+|+... ..+ ..||++|++|+.|+.+ .+++.
T Consensus 198 ~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~--------~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~ 267 (318)
T PRK10162 198 RDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDAD--------RESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRL 267 (318)
T ss_pred CCChhHHHhCCCccccCHHHHHHHHHHhCCCccc--------cCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHH
Confidence 2110 00000 0100000 001 11110 11232111 112 4678999999999987 69999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCC---ChHHHHHHHHHHHHHHHHhhC
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKS---GRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++++|+++|++++++.|+ |..|++.. ...+..+.+..+.+||.++|+
T Consensus 268 ~~~~L~~aGv~v~~~~~~---g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 268 LYQTLAAHQQPCEFKLYP---GTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHHcCCCEEEEEEC---CCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998 88997632 122334445567889998875
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=161.50 Aligned_cols=229 Identities=21% Similarity=0.254 Sum_probs=168.5
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
....++-.++|++.+|.+|.+|++.|... .++.|+||..||-.+....+ .....|+..||+|+.+|.||.|++-
T Consensus 51 ~~~ve~ydvTf~g~~g~rI~gwlvlP~~~---~~~~P~vV~fhGY~g~~g~~---~~~l~wa~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 51 LPRVEVYDVTFTGYGGARIKGWLVLPRHE---KGKLPAVVQFHGYGGRGGEW---HDMLHWAVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred CCceEEEEEEEeccCCceEEEEEEeeccc---CCccceEEEEeeccCCCCCc---cccccccccceeEEEEecccCCCcc
Confidence 34567888999999999999999999875 38899999999855544321 1235688999999999999998773
Q ss_pred hhH------------HHcccccCC-----cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEE
Q 010654 308 RQW------------YENGKFLKK-----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 370 (505)
Q Consensus 308 ~~~------------~~~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~ 370 (505)
.+- +..+..+.+ ...+.|+..+++-+.+...+|++||++.|+|.||.+++.+++..| +++++
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~ 203 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAV 203 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcc
Confidence 311 101111101 146899999999999999999999999999999999999999755 89999
Q ss_pred EecCCchhhhhhccCCCCCCCcccccc------cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHH
Q 010654 371 VAAVPFVDVLTTMLDPTIPLTTAEWEE------WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 371 v~~~~~~d~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
++..|++.-.....+ + .....|.+ .-.|...+.++.+.-++-.+.+.+++.| +|+..|..|++|||....
T Consensus 204 ~~~~Pfl~df~r~i~--~-~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~p-vL~svgL~D~vcpPstqF 279 (321)
T COG3458 204 VADYPFLSDFPRAIE--L-ATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVP-VLMSVGLMDPVCPPSTQF 279 (321)
T ss_pred cccccccccchhhee--e-cccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccc-eEEeecccCCCCCChhhH
Confidence 999998642222211 1 11122222 1233455667777777777888899998 999999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 445 KFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
.++++|...+ ++.+|+.. +|...
T Consensus 280 A~yN~l~~~K---~i~iy~~~---aHe~~ 302 (321)
T COG3458 280 AAYNALTTSK---TIEIYPYF---AHEGG 302 (321)
T ss_pred HHhhcccCCc---eEEEeecc---ccccC
Confidence 9999986543 45677743 58543
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=170.58 Aligned_cols=205 Identities=19% Similarity=0.207 Sum_probs=139.1
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCC-Cchh----HHHc--ccccC
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE-LGRQ----WYEN--GKFLK 318 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~-~g~~----~~~~--~~~~~ 318 (505)
|.+++..|++. ++.|.||++|+.+|-. .........|+++||.|++||+-+..+ .... .... .....
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 46788888763 6789999999987643 222234568899999999999755444 1111 1100 00111
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccccc
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 398 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 398 (505)
......|+.+++++|.+++.++.+||+++|+|+||.+++.++.+. +.++++|+..|. ..
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~----------~~---------- 133 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGG----------SP---------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-S----------SS----------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCC----------CC----------
Confidence 224568889999999999888899999999999999999998865 688999998880 00
Q ss_pred CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC---
Q 010654 399 GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG--- 475 (505)
Q Consensus 399 g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--- 475 (505)
+ ..+.....++++| +|+++|++|+.+|.++..++.++|++++.++++.+|+ |.+|++...
T Consensus 134 --~-----------~~~~~~~~~~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~---ga~HgF~~~~~~ 196 (218)
T PF01738_consen 134 --P-----------PPPLEDAPKIKAP-VLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYP---GAGHGFANPSRP 196 (218)
T ss_dssp --G-----------GGHHHHGGG--S--EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEET---T--TTTTSTTST
T ss_pred --C-----------CcchhhhcccCCC-EeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECC---CCcccccCCCCc
Confidence 0 0122234556676 9999999999999999999999999999999999999 889987321
Q ss_pred ---hHHHHHHHHHHHHHHHHhh
Q 010654 476 ---RFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 476 ---~~~~~~~~~~~~~fl~~~l 494 (505)
.....+.+.++++||.++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 1223445667899998876
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=173.68 Aligned_cols=251 Identities=16% Similarity=0.146 Sum_probs=158.8
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
+..+...+.+.||.+|.+....|++. .+.|+||++||..... ...|......|+++||.|+.+|+||+|.+....
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 133 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTC-TFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH 133 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCcc-chHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 34444556678999998887777543 4568999999975432 222344556788899999999999998654210
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc------
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML------ 384 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~------ 384 (505)
+........++|+.+.++.+..+...++.++.++|||+||.+++.++.++|++++++|+.+|+........
T Consensus 134 ---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 134 ---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred ---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH
Confidence 01111123466777777777655444556899999999999999999999999999999888643211000
Q ss_pred ------CCCCCC----Ccccccc--cCC----------------C-CCHHHHHHHHhC-ChhhcccCCCCCeEEEEccCC
Q 010654 385 ------DPTIPL----TTAEWEE--WGD----------------P-WKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGLN 434 (505)
Q Consensus 385 ------~~~~~~----~~~~~~~--~g~----------------~-~~~~~~~~~~~~-sp~~~~~~~~~Pp~Li~~G~~ 434 (505)
....+. ....+.. +.. + .-....+.+... +....+.++++| +|++||++
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P-~Lii~G~~ 289 (349)
T PLN02385 211 QILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLP-LLILHGEA 289 (349)
T ss_pred HHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCC-EEEEEeCC
Confidence 000000 0000000 000 0 000111111111 112345677898 99999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH--HHHHHHHHHHHHHhhC
Q 010654 435 DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER--LREAAFTYTFLMRALS 495 (505)
Q Consensus 435 D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~--~~~~~~~~~fl~~~l~ 495 (505)
|..||+..++++++.+... ..++++|+ ++||....+.++. ...+..+.+||.+++.
T Consensus 290 D~vv~~~~~~~l~~~~~~~--~~~l~~i~---~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 290 DKVTDPSVSKFLYEKASSS--DKKLKLYE---DAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCccChHHHHHHHHHcCCC--CceEEEeC---CCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999998877543 35678888 8899875444432 2234568999998864
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=164.20 Aligned_cols=192 Identities=11% Similarity=0.121 Sum_probs=127.1
Q ss_pred EEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhH--HHcccccCCcchHHH
Q 010654 249 CIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQW--YENGKFLKKKNTFTD 325 (505)
Q Consensus 249 ~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~--~~~~~~~~~~~~~~D 325 (505)
+++.|++. .+++|+||++||+++........ .......+.||+|+.||+||+++.+..| ...........+..|
T Consensus 2 ~ly~P~~~---~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 2 YVYVPAGL---TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred EEEcCCCC---CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 56778765 36789999999987653321111 1123344579999999999987554332 211111223456788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHH
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 405 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 405 (505)
+...++++.++..+|++||+|+|+|+||++++.++.++|++|+++++.++..-.... ... ........+....
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~----~~~---~~~~~~~~~~~~~ 151 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS----SSI---SATPQMCTAATAA 151 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc----cch---hhHhhcCCCCCHH
Confidence 999999999988899999999999999999999999999999999888775321100 000 0011111112222
Q ss_pred HHH-HHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 406 FYF-YMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 406 ~~~-~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
.+. .+.... .......|+++|+||++|.+||+..+++++++|++.
T Consensus 152 ~~~~~~~~~~---~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQ---SEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccC---CcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 221 112111 111225666899999999999999999999999986
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.4e-18 Score=171.02 Aligned_cols=202 Identities=32% Similarity=0.558 Sum_probs=156.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCce-EEEEEEeCCCcEEEEEeccccc-eEEEEEeCCCC---C-ceeeeecccccee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKIT-RFVFYLDVSKP---E-ELRVLTPRVVGVD 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~-~~~~~~SpDg~~i~~~~~~~~~-~~l~~~d~~~~---~-~~~~l~~~~~~~~ 80 (505)
|++||+|++||++.++++||+++++.+ .+++.+|+||++|++.+.+... +++|++|+.++ . .++++.++..+..
T Consensus 201 ~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 201 PRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp CEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred CcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 999999999999888999999988888 8899999999999999888766 99999999985 2 5888888887888
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
+.+.+.|+.||+.++. ++++++|+.++++.+....| ++++..+..+.++..++++|++..++++.++|.++++..
T Consensus 281 ~~v~~~~~~~yi~Tn~-~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~- 358 (414)
T PF02897_consen 281 YYVDHHGDRLYILTND-DAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDD- 358 (414)
T ss_dssp EEEEEETTEEEEEE-T-T-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT--
T ss_pred EEEEccCCEEEEeeCC-CCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCC-
Confidence 8888889999999996 56889999999987543233 667777778999999999999999999999999999861
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 217 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (505)
+... ..+.+|... .+.+.+.+++++.+.|.++|+++|+.+|.+|+.+++.++.
T Consensus 359 ~~~~------~~~~~p~~g-~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~ 411 (414)
T PF02897_consen 359 GKES------REIPLPEAG-SVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLL 411 (414)
T ss_dssp TEEE------EEEESSSSS-EEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEE
T ss_pred CcEE------eeecCCcce-EEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEE
Confidence 2211 233444332 2333455678999999999999999999999999985443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=164.71 Aligned_cols=238 Identities=16% Similarity=0.115 Sum_probs=153.7
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+.+.||.++++.++.|.+ .+.|+|+++||.... ...|......|+++||.|+.+|+||+|.+.... ....
T Consensus 5 ~~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~ 74 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMID 74 (276)
T ss_pred eecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcC
Confidence 345699999998776632 345889899997544 334666678899999999999999998753211 0011
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------------cc
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------ML 384 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------------~~ 384 (505)
.....++|+...++++.+.. ...++.++|+|+||.+++.++..+|++++++|..+|..+.... ..
T Consensus 75 ~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~ 152 (276)
T PHA02857 75 DFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFY 152 (276)
T ss_pred CHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhC
Confidence 11234677878887776542 2357999999999999999999999999999999987542110 00
Q ss_pred CCCCC-CCcccc--------ccc-CCC------CCHHHHHHHHhC--ChhhcccCCCCCeEEEEccCCCCCCCCChHHHH
Q 010654 385 DPTIP-LTTAEW--------EEW-GDP------WKEEFYFYMKSY--SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKF 446 (505)
Q Consensus 385 ~~~~~-~~~~~~--------~~~-g~~------~~~~~~~~~~~~--sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~ 446 (505)
..... .....+ ..+ .+| ........+... .....+.++++| +|++||++|..+|+..+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 153 PNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTP-ILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred CCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCC-EEEEecCCCCcCChHHHHHH
Confidence 00000 000000 000 011 000000001101 112346678898 99999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEecCCCCCCCCCChHH-HHHHHHHHHHHHHHhh
Q 010654 447 VAKLREMKTDDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRAL 494 (505)
Q Consensus 447 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~l 494 (505)
++.+.. .+++.+++ ++||....+... +.+.+..+.+||.++.
T Consensus 232 ~~~~~~---~~~~~~~~---~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 232 MQHANC---NREIKIYE---GAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHHccC---CceEEEeC---CCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 887643 45778888 889977654433 3334567899998863
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=156.82 Aligned_cols=216 Identities=18% Similarity=0.203 Sum_probs=161.8
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh----
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ---- 309 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~---- 309 (505)
+.+.+++.| ..+.+++.+|++. ++.|.||.+|+-++... ......+.|+..||+|+.||.-+..+-...
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 345677777 7899999999875 44499999999776433 345566899999999999998553222111
Q ss_pred --HHHcc--cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC
Q 010654 310 --WYENG--KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 385 (505)
Q Consensus 310 --~~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 385 (505)
....+ ..........|+.++++||..++.+|++||+++|+|+||.+++.++.+.| .++++++..|..-.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------ 148 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------ 148 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC------
Confidence 11111 01111467899999999999999899999999999999999999999765 78999998873210
Q ss_pred CCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEec
Q 010654 386 PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 465 (505)
Q Consensus 386 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~ 465 (505)
. . .....++++| +|+.+|+.|+.+|.....++.+++..+++.+++.+|+
T Consensus 149 -~------------~---------------~~~~~~~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~-- 197 (236)
T COG0412 149 -D------------D---------------TADAPKIKVP-VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP-- 197 (236)
T ss_pred -C------------c---------------ccccccccCc-EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC--
Confidence 0 0 0014566787 9999999999999999999999999999899999998
Q ss_pred CCCCCCCCCC---------hHHHHHHHHHHHHHHHHhhC
Q 010654 466 LGAGHFSKSG---------RFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 466 ~~~gH~~~~~---------~~~~~~~~~~~~~fl~~~l~ 495 (505)
+..|++... .......+.++++||.++++
T Consensus 198 -ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 198 -GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred -CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 778876422 12234456678999999875
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=164.89 Aligned_cols=247 Identities=17% Similarity=0.184 Sum_probs=151.4
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.+...+...||.++.+....|+ .+.|+||++||..... ..|......|+++||.|+.+|+||+|.+......
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 101 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDD 101 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC------CCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCC
Confidence 4556677789988877644332 2347899999975432 1244445578899999999999999977542210
Q ss_pred c--ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---------
Q 010654 313 N--GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------- 381 (505)
Q Consensus 313 ~--~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--------- 381 (505)
. +........++|+.+.++.+... .+..++.++|||+||.+++.++.++|++++++|+.+|......
T Consensus 102 ~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 179 (330)
T PRK10749 102 PHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR 179 (330)
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH
Confidence 0 00011123445666666665443 2347899999999999999999999999999999988643110
Q ss_pred ---hcc--C---CCCCCCccccccc---CC--CCCHHHH----HHHHhC---------------------ChhhcccCCC
Q 010654 382 ---TML--D---PTIPLTTAEWEEW---GD--PWKEEFY----FYMKSY---------------------SPVDNVKAQN 423 (505)
Q Consensus 382 ---~~~--~---~~~~~~~~~~~~~---g~--~~~~~~~----~~~~~~---------------------sp~~~~~~~~ 423 (505)
... . .........|... .+ ...++.+ +.+... .....+.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 259 (330)
T PRK10749 180 ILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDIT 259 (330)
T ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCC
Confidence 000 0 0000000000000 00 0011100 000000 1123456778
Q ss_pred CCeEEEEccCCCCCCCCChHHHHHHHHHhcCC---CCCeEEEEecCCCCCCCCCChH-HHHHHHHHHHHHHHHh
Q 010654 424 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKT---DDNILLFKCELGAGHFSKSGRF-ERLREAAFTYTFLMRA 493 (505)
Q Consensus 424 ~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~---~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 493 (505)
.| +|++||++|..|++..+.++++.+++++. ..++++|+ ++||....+.. .+...+..+.+||+++
T Consensus 260 ~P-~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~---gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 260 TP-LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIK---GAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CC-EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeC---CCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 87 99999999999999999999999987763 34788998 89997643332 2333455688898764
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.3e-18 Score=152.99 Aligned_cols=248 Identities=14% Similarity=0.113 Sum_probs=166.2
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.....+..++|..+......|... .++.-+|+++||... .....|......|+..||.|+..|++|+|.+...-
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~-~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~-- 100 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGE-HSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH-- 100 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcc-cchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc--
Confidence 344456778998887665556442 256678888998643 33455666778899999999999999999764311
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC-------
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD------- 385 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~------- 385 (505)
.+...-...++|+.+.++.++.+...-....+++|+||||.+++.++.++|+.+.++|..+|+.-....+..
T Consensus 101 -~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 101 -AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISI 179 (313)
T ss_pred -ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHH
Confidence 122333356788888888877765444467899999999999999999999999999999997643322110
Q ss_pred -----CCCCCCcc-ccccc----------------------CCCCCHHHHHHHHhC-ChhhcccCCCCCeEEEEccCCCC
Q 010654 386 -----PTIPLTTA-EWEEW----------------------GDPWKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 386 -----~~~~~~~~-~~~~~----------------------g~~~~~~~~~~~~~~-sp~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
.-+|-... .-... |.|.-...++.++.- .-..++.+++.| +||+||+.|.
T Consensus 180 l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP-flilHG~dD~ 258 (313)
T KOG1455|consen 180 LTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP-FLILHGTDDK 258 (313)
T ss_pred HHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc-EEEEecCCCc
Confidence 00110000 00000 112222222222211 112567788898 9999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHHh
Q 010654 437 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 493 (505)
++.+.-+++|++....+.+ ++.+|| |.-|.... ...+...-+.++.+||.++
T Consensus 259 VTDp~~Sk~Lye~A~S~DK--TlKlYp---Gm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 259 VTDPKVSKELYEKASSSDK--TLKLYP---GMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccCcHHHHHHHHhccCCCC--ceeccc---cHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999887765 577899 88997643 3333444466799999875
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=150.74 Aligned_cols=219 Identities=22% Similarity=0.249 Sum_probs=157.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~ 310 (505)
.++.+..++..|..+-+..+.|+.. ..+++++.||-.... .........|.. ..+.|+..||+|.|.++.+.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~-----~~~~lly~hGNa~Dl--gq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p 106 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEA-----AHPTLLYSHGNAADL--GQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP 106 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccc-----cceEEEEcCCcccch--HHHHHHHHHHhhcccceEEEEecccccccCCCc
Confidence 4455566777777787765655542 469999999972211 111112233444 38999999999999876543
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
.+ .+.++|+.++.+||.++.. .+++|+++|+|+|...+..+|.+.| .+|+|..+|+++.++.+.....
T Consensus 107 sE-------~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~-- 174 (258)
T KOG1552|consen 107 SE-------RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTK-- 174 (258)
T ss_pred cc-------ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcc--
Confidence 32 2778999999999999865 6799999999999999999999887 8999999999998877643211
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.. .| ...++-+..++.+++| +|++||++|++||+.++.+++++.+.. ++.++.. |+||
T Consensus 175 ~~-~~--------------~d~f~~i~kI~~i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~---g~gH 232 (258)
T KOG1552|consen 175 TT-YC--------------FDAFPNIEKISKITCP-VLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVK---GAGH 232 (258)
T ss_pred eE-Ee--------------eccccccCcceeccCC-EEEEecccCceecccccHHHHHhcccc---CCCcEEe---cCCC
Confidence 00 11 0112236677888998 999999999999999999999998764 5667777 8899
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhh
Q 010654 471 FSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
....-.++.++. +..|+...+
T Consensus 233 ~~~~~~~~yi~~---l~~f~~~~~ 253 (258)
T KOG1552|consen 233 NDIELYPEYIEH---LRRFISSVL 253 (258)
T ss_pred cccccCHHHHHH---HHHHHHHhc
Confidence 765444454444 445554433
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=146.04 Aligned_cols=209 Identities=20% Similarity=0.201 Sum_probs=144.7
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
-.|+++||..|+..+ ......+|.++||.|.+|+|+|+|-...+|...+...| ++|+.++.++|.+.++ +.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~e 86 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---DE 86 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---Ce
Confidence 899999998776443 34455789999999999999999998888876665555 6899999999999987 68
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh--ccCCCCCCCcccccccCCCCCHHHHHHHHhCC--h----
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT--MLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYS--P---- 415 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~s--p---- 415 (505)
|+|.|.||||.+++.++.++| .+++|..++..+..+. ...... .....+..+-....++..+.++++. |
T Consensus 87 I~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l-~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~ 163 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLL-EYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTT 163 (243)
T ss_pred EEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHH-HHHHHhhhccCCCHHHHHHHHHHhhcchHHHH
Confidence 999999999999999999988 5666655554332111 000000 0000111121122222222333333 2
Q ss_pred ----------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 010654 416 ----------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAF 485 (505)
Q Consensus 416 ----------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 485 (505)
...+..|..| +|+++|.+|+.||.+.+..+++.+... +.++.+|+ +.||-+..+. ++-...+.
T Consensus 164 ~~~~~~i~~~~~~~~~I~~p-t~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e---~SgHVIt~D~-Erd~v~e~ 236 (243)
T COG1647 164 AQLKKLIKDARRSLDKIYSP-TLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLE---GSGHVITLDK-ERDQVEED 236 (243)
T ss_pred HHHHHHHHHHHhhhhhcccc-hhheecccCCCCCHHHHHHHHHhccCC--cceeEEEc---cCCceeecch-hHHHHHHH
Confidence 2456778887 999999999999999999999998765 45688998 7899765442 22222345
Q ss_pred HHHHHH
Q 010654 486 TYTFLM 491 (505)
Q Consensus 486 ~~~fl~ 491 (505)
++.||+
T Consensus 237 V~~FL~ 242 (243)
T COG1647 237 VITFLE 242 (243)
T ss_pred HHHHhh
Confidence 788885
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=170.07 Aligned_cols=241 Identities=16% Similarity=0.156 Sum_probs=157.7
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCC-chhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAF-NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
++.||.+|.+.++.|++. ++.|+||++||...... ...+ ......|+++||+|+.+|+||.|.++..+..
T Consensus 2 ~~~DG~~L~~~~~~P~~~----~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~---- 73 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG----GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL---- 73 (550)
T ss_pred cCCCCCEEEEEEEecCCC----CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe----
Confidence 568999999999998753 57899999997543321 0111 1234688999999999999999988665421
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC-CCCCCc-cc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP-TIPLTT-AE 394 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~-~~~~~~-~~ 394 (505)
......+|+.++++|+.++++.+ .||+++|+||||++++.++..+|+.++|++..++..|+....... .+.... ..
T Consensus 74 -~~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~~~~~g~~~~~~~~~ 151 (550)
T TIGR00976 74 -LGSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRDIAFPGALRLDVLLG 151 (550)
T ss_pred -cCcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHhhccCCeeccchhHH
Confidence 11467899999999999998876 699999999999999999998899999999999988866432111 111000 00
Q ss_pred cc-c----cCCC--CC---------------------------------------------HHHHHHHHhCChhhcccCC
Q 010654 395 WE-E----WGDP--WK---------------------------------------------EEFYFYMKSYSPVDNVKAQ 422 (505)
Q Consensus 395 ~~-~----~g~~--~~---------------------------------------------~~~~~~~~~~sp~~~~~~~ 422 (505)
|. . ...+ .. ...++++...+....+.++
T Consensus 152 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i 231 (550)
T TIGR00976 152 WWALLATDSMRPRADDRPPRYAAAARLAQSYDDCQTALSHTPRSSVLALDRFIGWWIQVVDDDYDESWVSISLWRDLGGS 231 (550)
T ss_pred HHHhhccccccccccccccchHHHHHHhhhhhhHHHHHhcCCccccccccccchhhhhccCCCCChhhccCchhhHhcCC
Confidence 10 0 0000 00 0001111222333456678
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC--------CChH-HHHHHHHHHHHHHHHh
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK--------SGRF-ERLREAAFTYTFLMRA 493 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~--------~~~~-~~~~~~~~~~~fl~~~ 493 (505)
++| +|++.|-.|. ...++.+.++++.+.+ +.++++=| .+|... .+.. .........++||+++
T Consensus 232 ~vP-~l~~~gw~D~--~~~g~~~~~~~~~~~~-~~~lilGp----w~H~~~~~~~~~~~~g~~~~~~~~~~~~~~wfD~~ 303 (550)
T TIGR00976 232 DVP-TLVTGGWYDN--HSRGSIRLFLAVHRGG-AQRLVVGP----WTHSGLGGRVGDGNYGMAALSWVDEAEQLAFFDRH 303 (550)
T ss_pred CCC-EEEeCcccCC--CCchHHHHHHHHhhcC-CceEEEcc----CCCCCcccccCCCccCccccccchhhhhHHHHHHH
Confidence 998 9999999994 5567888888887764 55666545 245311 0000 0011112458999999
Q ss_pred hCCC
Q 010654 494 LSML 497 (505)
Q Consensus 494 l~~~ 497 (505)
|+..
T Consensus 304 Lkg~ 307 (550)
T TIGR00976 304 LKGG 307 (550)
T ss_pred hCCC
Confidence 9754
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=160.94 Aligned_cols=229 Identities=21% Similarity=0.235 Sum_probs=154.9
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hh-HHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SS-RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~-~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
..++..+++.++.| .. ....+.|+||++|||.......... .. ...+...|+.|+.+|||-..+.
T Consensus 58 ~~~~~~~~~~~y~p-~~-~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 58 GPSGDGVPVRVYRP-DR-KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred CCCCCceeEEEECC-CC-CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 34555677888888 22 3346789999999997655443333 23 3455668999999999977653
Q ss_pred CCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhhhhccCCCCC-
Q 010654 318 KKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTMLDPTIP- 389 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~~~~~~~- 389 (505)
.....++|+.+++.|+.++. .+|+++|+|+|+|+||.+++.++....+ ..++.+..+|.+|... . .....
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~~ 202 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLPG 202 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchhh
Confidence 34477899999999999874 4899999999999999999988866433 5688889999888653 1 11110
Q ss_pred ------CCccc---c--ccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 390 ------LTTAE---W--EEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 390 ------~~~~~---~--~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
+.... + ..+ +...+... ...+|+....-...||++|++|+.|...+ +++.++++|+++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~ 276 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDRED----PEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPV 276 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCC----CccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeE
Confidence 00000 0 000 11101000 12355544331137889999999999997 9999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCh-HHHHHHHHHHHHHHHH
Q 010654 458 NILLFKCELGAGHFSKSGR-FERLREAAFTYTFLMR 492 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~ 492 (505)
++..|+ +..|++.... ......+..+..|+.+
T Consensus 277 ~~~~~~---g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 277 ELRVYP---GMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred EEEEeC---CcceeccccCcHHHHHHHHHHHHHHHH
Confidence 999998 7889762211 3333444556667663
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-16 Score=155.63 Aligned_cols=245 Identities=15% Similarity=0.076 Sum_probs=153.9
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
......+..++|..+.+..+.|... .+.|+||++||..+... .|......|+++||.|+.+|+||+|.......
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~~--~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~ 182 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHSG--RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG 182 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHHH--HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC
Confidence 4455667788888888887777533 34689999999765422 24555678889999999999999987643211
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCchhhhhh------
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTT------ 382 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d~~~~------ 382 (505)
.........+|+.++++++.... +..++.|+|||+||.+++.++. +|+ .++++|..+|..++...
T Consensus 183 ---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~ 256 (395)
T PLN02652 183 ---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGA 256 (395)
T ss_pred ---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHH
Confidence 11122234678888888887542 2247999999999999987765 564 78899998887543210
Q ss_pred ---ccC---CCCCCCccc-------------ccccCCCC-----C--HHHHHHHHhCC-hhhcccCCCCCeEEEEccCCC
Q 010654 383 ---MLD---PTIPLTTAE-------------WEEWGDPW-----K--EEFYFYMKSYS-PVDNVKAQNYPHILVTAGLND 435 (505)
Q Consensus 383 ---~~~---~~~~~~~~~-------------~~~~g~~~-----~--~~~~~~~~~~s-p~~~~~~~~~Pp~Li~~G~~D 435 (505)
+.. +...+.... ...+.+|. . ...+..+.... ....+.++++| +|++||++|
T Consensus 257 ~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vP-vLIi~G~~D 335 (395)
T PLN02652 257 VAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVP-FMVLHGTAD 335 (395)
T ss_pred HHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCC-EEEEEeCCC
Confidence 000 000000000 00011110 0 00000011000 12345677898 999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
..+|+.++.++++.+... ..++.+|+ +++|....+ ....+....+.+||.++++
T Consensus 336 ~vvp~~~a~~l~~~~~~~--~k~l~~~~---ga~H~l~~e-~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 336 RVTDPLASQDLYNEAASR--HKDIKLYD---GFLHDLLFE-PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCCHHHHHHHHHhcCCC--CceEEEEC---CCeEEeccC-CCHHHHHHHHHHHHHHHhh
Confidence 999999999999987553 34677887 889975332 1222334568999999885
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=157.46 Aligned_cols=212 Identities=20% Similarity=0.279 Sum_probs=140.4
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-C--C-CCCc----hhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-N--D-PAFN----SSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~--~-~~~~----~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
||.+|.+.+++| +. ...++.|+||..|+-.... . . .... .....|+++||+|+.+|.||.++++..|...
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 899999999999 43 4568999999987643211 0 0 0000 0112399999999999999999988877521
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-hccCCCC-CCC
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-TMLDPTI-PLT 391 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-~~~~~~~-~~~ 391 (505)
...+.+|..++|+|+.++++.| .|||++|.||+|+..+.+|...|..++|++..++..|+.. ....... ...
T Consensus 79 -----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~ 152 (272)
T PF02129_consen 79 -----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLG 152 (272)
T ss_dssp -----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCC
T ss_pred -----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccccc
Confidence 6678999999999999998876 6999999999999999999978889999999999888655 1111000 000
Q ss_pred c-cccc----------ccCCCCC---------------------------------HHHHHHHHhCChhhcccCCCCCeE
Q 010654 392 T-AEWE----------EWGDPWK---------------------------------EEFYFYMKSYSPVDNVKAQNYPHI 427 (505)
Q Consensus 392 ~-~~~~----------~~g~~~~---------------------------------~~~~~~~~~~sp~~~~~~~~~Pp~ 427 (505)
. ..|. ....+.. +..-.++.+.++..++.++++| +
T Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP-~ 231 (272)
T PF02129_consen 153 FFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVP-V 231 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SE-E
T ss_pred chhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCC-E
Confidence 0 0110 0000000 0001223445555667888997 9
Q ss_pred EEEccCCCCCCCCChHHHHHHHHHhcC-CCCCeEEEE
Q 010654 428 LVTAGLNDPRVMYSEPAKFVAKLREMK-TDDNILLFK 463 (505)
Q Consensus 428 Li~~G~~D~~vp~~~~~~~~~~L~~~~-~~~~~~~~~ 463 (505)
|+++|-.|.... .++.+.+++|++.+ ++.++++-|
T Consensus 232 l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigp 267 (272)
T PF02129_consen 232 LIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGP 267 (272)
T ss_dssp EEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEES
T ss_pred EEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeC
Confidence 999999997777 89999999999998 677777776
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=146.00 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=126.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCC----CCchhHHHcccccCCc-------chHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG----ELGRQWYENGKFLKKK-------NTFTDFIAC 329 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~----~~g~~~~~~~~~~~~~-------~~~~D~~~~ 329 (505)
.+.|+||++||..++.. .|......|...++.+..+.++|.. +.|..|.... ..... .....+.+.
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHHHH
Confidence 45799999999766533 2455567787777655555666542 2244454211 11111 223344556
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHH
Q 010654 330 AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFY 409 (505)
Q Consensus 330 ~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 409 (505)
++++.++..++++||+++|+|+||.+++.++.++|++++++++.+|... .. +.
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------~~------------~~------- 143 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------SL------------PE------- 143 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------cc------------cc-------
Confidence 6777777678889999999999999999999888988888777655211 00 00
Q ss_pred HHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 010654 410 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTF 489 (505)
Q Consensus 410 ~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 489 (505)
.+ ..+.| +|++||++|+.||++.+++++++|++.+.++++..|+ +.||.+... ....+.+|
T Consensus 144 ----~~-----~~~~p-vli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~---~~gH~i~~~------~~~~~~~~ 204 (232)
T PRK11460 144 ----TA-----PTATT-IHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVE---DLGHAIDPR------LMQFALDR 204 (232)
T ss_pred ----cc-----cCCCc-EEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC---CCCCCCCHH------HHHHHHHH
Confidence 00 12455 9999999999999999999999999999999999998 889987522 22234556
Q ss_pred HHHhh
Q 010654 490 LMRAL 494 (505)
Q Consensus 490 l~~~l 494 (505)
|.+.|
T Consensus 205 l~~~l 209 (232)
T PRK11460 205 LRYTV 209 (232)
T ss_pred HHHHc
Confidence 65554
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=144.45 Aligned_cols=240 Identities=17% Similarity=0.168 Sum_probs=156.1
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC---CCCCchhHHHHHH-CCcEEEEEcccCCCCCch
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN---DPAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~---~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~ 308 (505)
...+.+... ..++..+|.|... ....+.|+|||+|||..... ...|+.....+++ .+.+|+.+|||-..+
T Consensus 63 ~~dv~~~~~--~~l~vRly~P~~~-~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE--- 136 (336)
T KOG1515|consen 63 SKDVTIDPF--TNLPVRLYRPTSS-SSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE--- 136 (336)
T ss_pred eeeeEecCC--CCeEEEEEcCCCC-CcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC---
Confidence 344444433 4577888888875 44478999999999975433 3445555556644 699999999997654
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHc----CCCCCCcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKN----CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVD 378 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d 378 (505)
...+..++|..+|+.|+.++ ..+|++||+|+|.|+||.++..++.+. +-.+++.|...|++.
T Consensus 137 --------h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 137 --------HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred --------CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 44557889999999999886 458999999999999999988877542 246899999999876
Q ss_pred hhhhccCC------CCC-CCc----ccccccCCCCCHHHHHHHHhCChhh-----cccCCCCCeEEEEccCCCCCCCCCh
Q 010654 379 VLTTMLDP------TIP-LTT----AEWEEWGDPWKEEFYFYMKSYSPVD-----NVKAQNYPHILVTAGLNDPRVMYSE 442 (505)
Q Consensus 379 ~~~~~~~~------~~~-~~~----~~~~~~g~~~~~~~~~~~~~~sp~~-----~~~~~~~Pp~Li~~G~~D~~vp~~~ 442 (505)
.......+ ..+ ... ..|. .-.|+.....+ --..+|.. ......+|++|++.++.|... .+
T Consensus 209 ~~~~~~~e~~~~~~~~~~~~~~~~~~~w~-~~lP~~~~~~~-~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~ 284 (336)
T KOG1515|consen 209 GTDRTESEKQQNLNGSPELARPKIDKWWR-LLLPNGKTDLD-HPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DE 284 (336)
T ss_pred CCCCCCHHHHHhhcCCcchhHHHHHHHHH-HhCCCCCCCcC-CccccccccccccCccccCCCceEEEEeCchhhh--hh
Confidence 54322110 000 000 0011 01111000000 00112332 122336788999999999777 89
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHh
Q 010654 443 PAKFVAKLREMKTDDNILLFKCELGAGHFSK---SGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 443 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~~fl~~~ 493 (505)
+..++++|++.|++++++.++ ++.|++. .........+..+.+|+.+.
T Consensus 285 ~~~Y~~~Lkk~Gv~v~~~~~e---~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 285 GLAYAEKLKKAGVEVTLIHYE---DGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hHHHHHHHHHcCCeEEEEEEC---CCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999999999977777 7788642 22233344444567777653
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.8e-17 Score=146.43 Aligned_cols=187 Identities=20% Similarity=0.247 Sum_probs=123.4
Q ss_pred EEEEcCCCCcCCCCCCc-hhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---CCCC
Q 010654 266 LLYGYGSYEICNDPAFN-SSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCT 340 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~-~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 340 (505)
||++|||.......... .....+++ +|++|+.+|||-+.+ ......++|+.++++|+.++ ..+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-----------~~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-----------APFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-----------SSTTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-----------ccccccccccccceeeecccccccccc
Confidence 78999997664443333 33456665 899999999996543 33457899999999999987 3478
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhhhhc---c-----CCCCCCC-cccc----cccCCCCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTM---L-----DPTIPLT-TAEW----EEWGDPWK 403 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~---~-----~~~~~~~-~~~~----~~~g~~~~ 403 (505)
++||+|+|.|+||.+++.++.+..+ .++++++.+|.+|+.... . ....++. .... ..+-...+
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSD 149 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGG
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999998865333 489999999988761110 0 0010110 0000 00100000
Q ss_pred HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 404 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
.+ -...||+........||++|++|+.|..+ .++.+|+++|++.|+++++++++ +.+|.+
T Consensus 150 ~~----~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~---g~~H~f 209 (211)
T PF07859_consen 150 RD----DPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYP---GMPHGF 209 (211)
T ss_dssp TT----STTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEET---TEETTG
T ss_pred cc----ccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEEC---CCeEEe
Confidence 00 01346665522225889999999999876 68999999999999999999998 778864
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-15 Score=144.23 Aligned_cols=244 Identities=19% Similarity=0.176 Sum_probs=150.2
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
.+-.+.+.||..+......++.. +..+||++||...... .|......|..+||.|+..|.||+|.+.+ ...
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~~--ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~r 80 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHSG--RYEELADDLAARGFDVYALDLRGHGRSPR--GQR 80 (298)
T ss_pred ccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCc
Confidence 34456778999887765544432 2389999999764322 24455678999999999999999998853 111
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--hc--------
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TM-------- 383 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~~-------- 383 (505)
+.......-+.|+...++.+... . -..++.++||||||.+++.++.+++..++++|..+|++.... ..
T Consensus 81 g~~~~f~~~~~dl~~~~~~~~~~-~-~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~ 158 (298)
T COG2267 81 GHVDSFADYVDDLDAFVETIAEP-D-PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLAL 158 (298)
T ss_pred CCchhHHHHHHHHHHHHHHHhcc-C-CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhc
Confidence 11111223344444444444432 1 136899999999999999999999999999999999887652 00
Q ss_pred --cC---CCCCCCcc-c-ccccCCC-CCHHHHHHHHhCCh-----------------------hhcccCCCCCeEEEEcc
Q 010654 384 --LD---PTIPLTTA-E-WEEWGDP-WKEEFYFYMKSYSP-----------------------VDNVKAQNYPHILVTAG 432 (505)
Q Consensus 384 --~~---~~~~~~~~-~-~~~~g~~-~~~~~~~~~~~~sp-----------------------~~~~~~~~~Pp~Li~~G 432 (505)
.. ...+.... . ....... .+++..+.+ ..+| .....+++.| +||+||
T Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~-~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P-vLll~g 236 (298)
T COG2267 159 KLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAY-EADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP-VLLLQG 236 (298)
T ss_pred ccccccccccccCcccccCcCcchhhcCHHHHHHH-hcCCccccCCccHHHHHHHHHhhcccchhccccccCC-EEEEec
Confidence 00 01111110 0 0000000 122211111 1222 1224556887 999999
Q ss_pred CCCCCCC-CChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh-HHHHHHHHHHHHHHHHhhC
Q 010654 433 LNDPRVM-YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR-FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 433 ~~D~~vp-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l~ 495 (505)
+.|.+|+ ...+.++++++.... .+++.|+ |+.|....+. ..+...+..+.+|+.+++.
T Consensus 237 ~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~~---g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 237 GDDRVVDNVEGLARFFERAGSPD--KELKVIP---GAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CCCccccCcHHHHHHHHhcCCCC--ceEEecC---CcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999999 566666666655443 5788898 8899654322 2124446668999988764
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=151.98 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=139.9
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+++.++-.+ ..|++++..|+. +++.|+||++ ||..+-....+......++.+|++++.+|.+|.|....
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~----~~p~P~VIv~-gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~- 234 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSG----EKPYPTVIVC-GGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK- 234 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSS----SS-EEEEEEE---TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCC----CCCCCEEEEe-CCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-
Confidence 5678888888755 789999888874 3778988887 44333222222222246788999999999999886421
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch-hhhhh-ccCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-DVLTT-MLDPT 387 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d~~~~-~~~~~ 387 (505)
|- ..+..-.-..++++||.+.+++|.+||+++|.|+||+.+..++..++++++|+|+..|++ ++... .....
T Consensus 235 ~~------l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 235 WP------LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp T-------S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTT
T ss_pred CC------CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhc
Confidence 11 111111234578999999999999999999999999999999877788999999887753 33221 00012
Q ss_pred CCCCcc-cc-cccCCC--CCHHHHHHHHhCChhh--cc--cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 388 IPLTTA-EW-EEWGDP--WKEEFYFYMKSYSPVD--NV--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 388 ~~~~~~-~~-~~~g~~--~~~~~~~~~~~~sp~~--~~--~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
.|..-. .+ ..+|.. ++......+..+|-.. -+ .+.++| +|.+.|++|+++|.+++.-++. .+.+-+.
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~p-lL~i~~~~D~v~P~eD~~lia~----~s~~gk~ 383 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTP-LLAINGEDDPVSPIEDSRLIAE----SSTDGKA 383 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS--EEEEEETT-SSS-HHHHHHHHH----TBTT-EE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcc-eEEeecCCCCCCCHHHHHHHHh----cCCCCce
Confidence 221100 01 224543 3334444556666643 23 555787 9999999999999988765543 3444456
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
..++. +.=|. +.. ..+..+..||++.|
T Consensus 384 ~~~~~--~~~~~---gy~---~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 384 LRIPS--KPLHM---GYP---QALDEIYKWLEDKL 410 (411)
T ss_dssp EEE-S--SSHHH---HHH---HHHHHHHHHHHHHH
T ss_pred eecCC--Ccccc---chH---HHHHHHHHHHHHhc
Confidence 67762 11131 112 33445899998865
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.7e-16 Score=136.84 Aligned_cols=194 Identities=18% Similarity=0.195 Sum_probs=123.1
Q ss_pred eEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhH--HHcccccCCcchH
Q 010654 247 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQW--YENGKFLKKKNTF 323 (505)
Q Consensus 247 ~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~--~~~~~~~~~~~~~ 323 (505)
...|+.|++. +.++.|+||.+||+.+......-...+..+++ +||+|+.|+-........-| .. .....+..+.
T Consensus 2 ~Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGA--PRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCC--CCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccch
Confidence 4567888865 33578999999998664322111112346777 59999999854322222223 22 2223344566
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCC
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWK 403 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~ 403 (505)
..+.+.++++.++..+|++||.+.|.|.||.|+..++..+||+|+|+...+|+.--... + .. .......-|....
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~--~-~~--~a~~~m~~g~~~~ 153 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAA--S-GA--SALSAMRSGPRPA 153 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccccc--C-cc--cHHHHhhCCCCCC
Confidence 77888899999999999999999999999999999999999999999988775321100 0 00 0000000121122
Q ss_pred HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 404 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
+.........+. ... ..| ++|+||+.|..|.+.++.++.+.+...
T Consensus 154 p~~~~~a~~~~g--~~~--~~P-~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 154 PAAAWGARSDAG--AYP--GYP-RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred hHHHHHhhhhcc--CCC--CCC-EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 221111111111 111 245 899999999999999999998888764
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.3e-15 Score=144.71 Aligned_cols=244 Identities=16% Similarity=0.136 Sum_probs=142.7
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
++..+...||..+.......+. ...+.|+||++||..+.............|.++||.|+.+|+||.|+.......
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 3344577899776544221111 124579999999987654332223345678899999999999998765322111
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc--eeEEEecCCchhhhhh---------
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLTT--------- 382 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~~~d~~~~--------- 382 (505)
.......+|+..+++++.++.. ..++.++|+|+||.+++.+++++++. ++++|+.++..++...
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~ 182 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS 182 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH
Confidence 1112357899999999987632 35799999999999888777766543 6776666665432100
Q ss_pred -cc-------------------CCCCCCC---------cccccc-cCCC--CCHHHHHHHHhCChhhcccCCCCCeEEEE
Q 010654 383 -ML-------------------DPTIPLT---------TAEWEE-WGDP--WKEEFYFYMKSYSPVDNVKAQNYPHILVT 430 (505)
Q Consensus 383 -~~-------------------~~~~~~~---------~~~~~~-~g~~--~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~ 430 (505)
.+ ....+.. ..++.+ +..+ ......+++...++...+.++++| +|++
T Consensus 183 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P-~lii 261 (324)
T PRK10985 183 RVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKP-TLII 261 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCC-EEEE
Confidence 00 0000000 000000 0011 011122334456666777888998 9999
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC-C---hHHHHHHHHHHHHHHHHhhC
Q 010654 431 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS-G---RFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 431 ~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~---~~~~~~~~~~~~~fl~~~l~ 495 (505)
+|++|+.+++.....+.+ ....+++++.+ ++||.... + ....+- -..+.+||...++
T Consensus 262 ~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~---~~GH~~~~~g~~~~~~~w~-~~~~~~~~~~~~~ 322 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPES----LPPNVEYQLTE---HGGHVGFVGGTLLKPQMWL-EQRIPDWLTTYLE 322 (324)
T ss_pred ecCCCCCCChhhChHHHH----hCCCeEEEECC---CCCceeeCCCCCCCCCccH-HHHHHHHHHHhhc
Confidence 999999998866655432 22345556666 78995321 1 122221 1247888876653
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7e-16 Score=130.67 Aligned_cols=235 Identities=17% Similarity=0.152 Sum_probs=163.5
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.++-|+++..++|..+++++++.-. ...|++++.|+..+... .........+.+.+..|++++|||.|.+...
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 5677899999999999999987622 36899999998655422 1111223466778999999999988765333
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 389 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 389 (505)
-.+ . .-.-|..++++||..++..|..++.++|.|.||..+..+++...+++.|++....++.....+..--.|
T Consensus 124 psE-----~--GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p 196 (300)
T KOG4391|consen 124 PSE-----E--GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP 196 (300)
T ss_pred ccc-----c--ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc
Confidence 222 1 234688899999999999999999999999999999999999899999999998887654332211111
Q ss_pred CCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 390 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 390 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
+.......+ .++ ..++....+.+.+.| .|++.|..|..|||-+.+++++.-..+.+ ++..|| ++.
T Consensus 197 ~~~k~i~~l-------c~k--n~~~S~~ki~~~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K--rl~eFP---~gt 261 (300)
T KOG4391|consen 197 FPMKYIPLL-------CYK--NKWLSYRKIGQCRMP-FLFISGLKDELVPPVMMRQLYELCPSRTK--RLAEFP---DGT 261 (300)
T ss_pred chhhHHHHH-------HHH--hhhcchhhhccccCc-eEEeecCccccCCcHHHHHHHHhCchhhh--hheeCC---CCc
Confidence 111100000 011 012334445566787 99999999999999999999998877654 467888 778
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|.-..-....++ .+.+||.+....
T Consensus 262 HNDT~i~dGYfq---~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 262 HNDTWICDGYFQ---AIEDFLAEVVKS 285 (300)
T ss_pred cCceEEeccHHH---HHHHHHHHhccC
Confidence 853221112222 367788886553
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.4e-15 Score=147.62 Aligned_cols=247 Identities=15% Similarity=0.159 Sum_probs=146.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
..++..+...||..+....+.+... ......|+||++||..++.....+......+.++||.|+++|+||.|+....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~-- 146 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT-- 146 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC--
Confidence 3455567788998887553332211 1223468999999987654432122234556789999999999999875321
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc--eeEEEecCCchhhhh---hccC-
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLT---TMLD- 385 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~~~d~~~---~~~~- 385 (505)
..........+|+.++++++..+. ...++.++|+|+||.+++.++.++++. +.++++.++..++.. .+..
T Consensus 147 --~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~ 222 (388)
T PLN02511 147 --TPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG 222 (388)
T ss_pred --CcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc
Confidence 011112345789999999998762 235899999999999999999998876 666665544333210 0000
Q ss_pred ------C------------------CCC--C---------Ccccccc-cCCC----CCHHHHHHHHhCChhhcccCCCCC
Q 010654 386 ------P------------------TIP--L---------TTAEWEE-WGDP----WKEEFYFYMKSYSPVDNVKAQNYP 425 (505)
Q Consensus 386 ------~------------------~~~--~---------~~~~~~~-~g~~----~~~~~~~~~~~~sp~~~~~~~~~P 425 (505)
. ..+ . ...++.+ +..+ ...+ +++...|+...+.++++|
T Consensus 223 ~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~--~yy~~~s~~~~L~~I~vP 300 (388)
T PLN02511 223 FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVD--AYYSNSSSSDSIKHVRVP 300 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHH--HHHHHcCchhhhccCCCC
Confidence 0 000 0 0000000 0000 0111 123455677788899998
Q ss_pred eEEEEccCCCCCCCCChHH-HHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH----HHHHHHHHHHHHhhC
Q 010654 426 HILVTAGLNDPRVMYSEPA-KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL----REAAFTYTFLMRALS 495 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~----~~~~~~~~fl~~~l~ 495 (505)
+|+|+|++|+.+|+.... .+. +....+++++++ ++||....+.+... -....+.+||.....
T Consensus 301 -tLiI~g~dDpi~p~~~~~~~~~----~~~p~~~l~~~~---~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 301 -LLCIQAANDPIAPARGIPREDI----KANPNCLLIVTP---SGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred -eEEEEcCCCCcCCcccCcHhHH----hcCCCEEEEECC---CcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999986542 222 223345666776 88996543332210 012246788877653
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-14 Score=137.36 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=134.9
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
....+.+...+|.++... +.... . ...|.||++||.+... ..|......|.++||.|+++|.||.|......
T Consensus 20 ~~~~~~~~~~~~~~~~i~--y~~~G-~--~~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~- 91 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMH--YVDEG-P--ADGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT- 91 (302)
T ss_pred CceeEeecCCCCceEEEE--EEecC-C--CCCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-
Confidence 344455555566654432 22221 1 2357899999986443 23666666787889999999999998653211
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh--------hhhc
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV--------LTTM 383 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~--------~~~~ 383 (505)
......+++..+.+..++++ .+.+++.++|||+||.+++.++..+|+++++++..++..-. ...+
T Consensus 92 -----~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 164 (302)
T PRK00870 92 -----RREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAW 164 (302)
T ss_pred -----CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhh
Confidence 01112345554444444443 23368999999999999999999999999999887653110 0000
Q ss_pred cC--CCCCCC-cc-------------cc-cccCCC-CCHHH---HHHHHh---CCh-----------hhcccCCCCCeEE
Q 010654 384 LD--PTIPLT-TA-------------EW-EEWGDP-WKEEF---YFYMKS---YSP-----------VDNVKAQNYPHIL 428 (505)
Q Consensus 384 ~~--~~~~~~-~~-------------~~-~~~g~~-~~~~~---~~~~~~---~sp-----------~~~~~~~~~Pp~L 428 (505)
.. ...+.. .. .. ..+..+ ..... ...+.. ..+ ...+.++++| +|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l 243 (302)
T PRK00870 165 RAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKP-FL 243 (302)
T ss_pred hcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCc-eE
Confidence 00 000000 00 00 001101 00000 000000 000 1234677898 99
Q ss_pred EEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 429 VTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 429 i~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+++|+.|+.+|... .++.+.+.... ..+++.++ ++||......++.+. ..+.+|+.++
T Consensus 244 ii~G~~D~~~~~~~-~~~~~~~~~~~-~~~~~~i~---~~gH~~~~e~p~~~~--~~l~~fl~~~ 301 (302)
T PRK00870 244 TAFSDSDPITGGGD-AILQKRIPGAA-GQPHPTIK---GAGHFLQEDSGEELA--EAVLEFIRAT 301 (302)
T ss_pred EEecCCCCcccCch-HHHHhhccccc-ccceeeec---CCCccchhhChHHHH--HHHHHHHhcC
Confidence 99999999999865 77766665321 12356777 889987655554433 3577888653
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=143.32 Aligned_cols=209 Identities=14% Similarity=0.123 Sum_probs=123.8
Q ss_pred CcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.|.||++||.+.....+. +......+++.||.|+.+|+||.|.+...... ........+|+.+.++.+ +.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l------~~ 100 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL------DI 100 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc------CC
Confidence 477999999765432211 11223456778999999999999876432100 001112234544444443 44
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-----------hccCC-CCCCCccccc----c--cCCC--
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----------TMLDP-TIPLTTAEWE----E--WGDP-- 401 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-----------~~~~~-~~~~~~~~~~----~--~g~~-- 401 (505)
+++.++|||+||.+++.++.++|++++++|+.+|...... .+... ..+. ...+. . +...
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPS-YETLKQMLNVFLFDQSLI 179 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCC-HHHHHHHHhhCccCcccC
Confidence 7999999999999999999999999999998776421000 00000 0000 00000 0 0000
Q ss_pred -------------CCHHHH-HHHH--------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 402 -------------WKEEFY-FYMK--------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 402 -------------~~~~~~-~~~~--------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
..+... ..+. ..+....+.++++| +|+++|++|..+|+..++++++.+. ++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlli~G~~D~~v~~~~~~~~~~~~~----~~~~ 254 (282)
T TIGR03343 180 TEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAK-TLVTWGRDDRFVPLDHGLKLLWNMP----DAQL 254 (282)
T ss_pred cHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCC-EEEEEccCCCcCCchhHHHHHHhCC----CCEE
Confidence 001110 0110 01112345678898 9999999999999988888877664 4677
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++++ ++||....+.++.+.. .+.+|+.
T Consensus 255 ~~i~---~agH~~~~e~p~~~~~--~i~~fl~ 281 (282)
T TIGR03343 255 HVFS---RCGHWAQWEHADAFNR--LVIDFLR 281 (282)
T ss_pred EEeC---CCCcCCcccCHHHHHH--HHHHHhh
Confidence 8888 8899876666654433 4677774
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-15 Score=141.47 Aligned_cols=143 Identities=20% Similarity=0.176 Sum_probs=92.1
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc------------CCCCCC----chhHHHHHHCC
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI------------CNDPAF----NSSRLSLLDRG 292 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~------------~~~~~~----~~~~~~l~~~G 292 (505)
..+..|++.|.+.++..++++++.|++. .++.|+||++||-.+. .....+ ......|+++|
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 4689999999999999999999999875 4789999999872211 000011 11346899999
Q ss_pred cEEEEEcccCCCCCchhHH-----------------HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHH
Q 010654 293 FIFAIAQIRGGGELGRQWY-----------------ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLL 355 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~~~-----------------~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~ 355 (505)
|+|+++|.+|-|+.+..-. ..+....+ ....|.+.+++||.+++.+|++|||++|+|+||+.
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G-~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAG-LMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHH-HHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHH-HHHHHHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 9999999998886543110 01111111 23355667999999999999999999999999999
Q ss_pred HHHHHhhCCCceeEEEecCCc
Q 010654 356 IGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 356 ~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++++++. .++++|+|+.+-+
T Consensus 240 a~~LaAL-DdRIka~v~~~~l 259 (390)
T PF12715_consen 240 AWWLAAL-DDRIKATVANGYL 259 (390)
T ss_dssp HHHHHHH--TT--EEEEES-B
T ss_pred HHHHHHc-chhhHhHhhhhhh
Confidence 9999997 5688887765443
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.8e-15 Score=138.15 Aligned_cols=208 Identities=17% Similarity=0.186 Sum_probs=123.3
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|+||++||..++.. .|......| ++||.|+.+|+||.|...... .....++|..+.+..+++. .+.
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~~~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAPQLDVL-TQRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--LNI 79 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHHHHHHH-HhccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--hCC
Confidence 4689999999876532 243333344 568999999999998764321 1112334444333333332 234
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-----------hccCCCCC---------CCccccc-c---
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----------TMLDPTIP---------LTTAEWE-E--- 397 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-----------~~~~~~~~---------~~~~~~~-~--- 397 (505)
+++.++|+|+||.+++.++.++|+.++++|..++...... .+...... .....|. .
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 6899999999999999999999998998887776432110 00000000 0000000 0
Q ss_pred ---------cCCC-CCHH---HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 398 ---------WGDP-WKEE---FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 398 ---------~g~~-~~~~---~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
.... .... ....+...+....+.++++| +|+++|++|..+|+++++++++.+.. .+++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~- 233 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHP-VLLIANRDDMLVPYTQSLRLAAALPN----AQLKLLP- 233 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCcc-EEEEecCcCcccCHHHHHHHHHhcCC----ceEEEEC-
Confidence 0000 0001 11112223444556777887 99999999999999999888876643 4566776
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 465 ELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 465 ~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++||......++.+. ..+.+||.
T Consensus 234 --~~gH~~~~~~~~~~~--~~i~~fl~ 256 (257)
T TIGR03611 234 --YGGHASNVTDPETFN--RALLDFLK 256 (257)
T ss_pred --CCCCCccccCHHHHH--HHHHHHhc
Confidence 789986554444332 24677764
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-15 Score=128.02 Aligned_cols=145 Identities=19% Similarity=0.299 Sum_probs=106.5
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcE
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 344 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv 344 (505)
+||++||+.+. ...|....+.|+++||.|+.+|+|+.+.... ..++.++++++.+.. .|+++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGY-PDPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHH-CTCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhc-CCCCcE
Confidence 58999998764 2336666789999999999999998876521 124445555543321 288999
Q ss_pred EEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCC
Q 010654 345 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNY 424 (505)
Q Consensus 345 ~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~ 424 (505)
+++|+|+||.+++.++.++ ..++++|+.+|..+ ... +.+.+.
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~------------------------~~~-------------~~~~~~ 105 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD------------------------SED-------------LAKIRI 105 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSG------------------------CHH-------------HTTTTS
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccc------------------------hhh-------------hhccCC
Confidence 9999999999999999987 68999999988311 000 112233
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
| +|+++|++|+.+|+++..+++++++ .+.+++.++ +++|+
T Consensus 106 p-v~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~---g~~H~ 145 (145)
T PF12695_consen 106 P-VLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIP---GAGHF 145 (145)
T ss_dssp E-EEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEET---TS-TT
T ss_pred c-EEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeC---CCcCc
Confidence 5 9999999999999999999999887 456777777 88884
|
... |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-15 Score=133.20 Aligned_cols=178 Identities=19% Similarity=0.173 Sum_probs=124.1
Q ss_pred CCCceeeEEEEEeCCccCCCCCC-cEEEEEcCCCCcCCCCCCc--h--hHHHH--HHCCcEEEEEcccCCCCCchhHHHc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSD-PLLLYGYGSYEICNDPAFN--S--SRLSL--LDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~-P~iv~~hGg~~~~~~~~~~--~--~~~~l--~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
.-|.++...++.|++. .+++++ |++|++||+........-. . ..-.| -+.++-|+.|.|- .-|...
T Consensus 169 ~tgneLkYrly~Pkdy-~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~------~if~d~ 241 (387)
T COG4099 169 STGNELKYRLYTPKDY-APDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN------PIFADS 241 (387)
T ss_pred ccCceeeEEEeccccc-CCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccc------cccccc
Confidence 3567899999999999 888887 9999999976443221100 0 00112 2234566666532 222111
Q ss_pred ccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 314 GKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
. ..-........+.++ .|.++..||.+||.+.|.|+||+.+..++.++|+.|+|++..+|--|-
T Consensus 242 e--~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------- 306 (387)
T COG4099 242 E--EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------- 306 (387)
T ss_pred c--cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch-------------
Confidence 1 111123344445555 677888999999999999999999999999999999999998873321
Q ss_pred ccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 393 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 393 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
. ...+++. +.| +.++|+.+|..+|.+++.-+++.|+..+.++++..|.
T Consensus 307 -----------v------~lv~~lk-----~~p-iWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 307 -----------V------YLVRTLK-----KAP-IWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred -----------h------hhhhhhc-----cCc-eEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 0 0012221 345 9999999999999999999999999999988877776
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=130.90 Aligned_cols=244 Identities=20% Similarity=0.213 Sum_probs=145.0
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
+..+..+||..+......++.. .+.|+||.+||-.|+..++.-......+.++||.|++.|.||.++.-..-
T Consensus 51 re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~---- 122 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS---- 122 (345)
T ss_pred eEEEEcCCCCEEEEeeccCccc----cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC----
Confidence 3355667777665555554432 45699999999877766653334456788899999999999998753311
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCCchhhhhh----------
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVPFVDVLTT---------- 382 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~~~d~~~~---------- 382 (505)
.........+|+..+++++.++.. +.++.++|.|+||.+.+..+++..+ ...|+++.+--+|+..-
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL 200 (345)
T ss_pred cceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh
Confidence 112222445999999999998754 5789999999999655555444332 23444443332332110
Q ss_pred -c-------------------cCCCCCCC-c------cccccc----CCC--CCHHHHHHHHhCChhhcccCCCCCeEEE
Q 010654 383 -M-------------------LDPTIPLT-T------AEWEEW----GDP--WKEEFYFYMKSYSPVDNVKAQNYPHILV 429 (505)
Q Consensus 383 -~-------------------~~~~~~~~-~------~~~~~~----g~~--~~~~~~~~~~~~sp~~~~~~~~~Pp~Li 429 (505)
+ +....+.. . ....++ -.| .-++..++++..|.+..+++|..| +||
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~P-tLi 279 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKP-TLI 279 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccc-eEE
Confidence 0 00111111 0 000111 111 122334566888999999999998 999
Q ss_pred EccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC-CCChH--HHHHHHHHHHHHHHHhhC
Q 010654 430 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS-KSGRF--ERLREAAFTYTFLMRALS 495 (505)
Q Consensus 430 ~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~-~~~~~--~~~~~~~~~~~fl~~~l~ 495 (505)
||..+|+.+++...-+.-.. ....+.+.+-+ .+||-+ ..+.. ..+-...++.+||+..+.
T Consensus 280 i~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~---~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 280 INAKDDPFMPPEVIPKLQEM---LNPNVLLQLTE---HGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EecCCCCCCChhhCCcchhc---CCCceEEEeec---CCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999987443332221 33344444443 779932 22111 111223458889988764
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-14 Score=137.90 Aligned_cols=240 Identities=13% Similarity=0.102 Sum_probs=135.7
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--------------------C---C-chhHHHHHHCCc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--------------------A---F-NSSRLSLLDRGF 293 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--------------------~---~-~~~~~~l~~~G~ 293 (505)
+.+.||..|......|+ .+..+|+++||-.+..... . | ......|+++||
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 46779999987755553 2357999999954332210 1 1 234678999999
Q ss_pred EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc------------------CCCCCCcEEEEeeChHHHH
Q 010654 294 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN------------------CYCTKEKLCIEGRSAGGLL 355 (505)
Q Consensus 294 ~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~rv~i~G~S~GG~~ 355 (505)
.|+.+|.||+|.....-...+.......-++|+...++.+.+. .+-....+.|+||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999999865432000011111123456677777666541 0111247999999999999
Q ss_pred HHHHHhhCCC--------ceeEEEecCCchhhhh---------------------hccCCCCCCCc-cc--c-----ccc
Q 010654 356 IGAVLNMRPD--------LFKAAVAAVPFVDVLT---------------------TMLDPTIPLTT-AE--W-----EEW 398 (505)
Q Consensus 356 ~~~~~~~~p~--------~~~a~v~~~~~~d~~~---------------------~~~~~~~~~~~-~~--~-----~~~ 398 (505)
++.++..+++ .++++|+.+|...+.. .+. +...... .. + ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVF-PTFRISKKIRYEKSPYVNDII 234 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHC-CcccccCccccccChhhhhHH
Confidence 9988765432 5788887777542110 000 0110000 00 0 000
Q ss_pred -CCCC------CHHHHHHHHhCCh--hhcccCC--CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 399 -GDPW------KEEFYFYMKSYSP--VDNVKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 399 -g~~~------~~~~~~~~~~~sp--~~~~~~~--~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
.+|. .......+..... ...+.++ ++| +|++||++|..|++..+.++++++... ..++.+|+ +
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P-~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~---g 308 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIP-ILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLE---D 308 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCC-EEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEEC---C
Confidence 0110 0011111111100 1133444 577 999999999999999998888776543 35677888 8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHH
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++|....+. ...+....+.+||.
T Consensus 309 ~~H~i~~E~-~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEP-GNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCccCC-CHHHHHHHHHHHhh
Confidence 899765432 12233446788874
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=130.67 Aligned_cols=207 Identities=19% Similarity=0.187 Sum_probs=131.1
Q ss_pred ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 244 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 244 ~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
..+++.+++|... +++|+||++||+.... ..|......|+++||+|+.+|++|.++. .....+
T Consensus 37 ~~~p~~v~~P~~~----g~~PvVv~lHG~~~~~--~~y~~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSEA----GTYPVLLFLHGYLLYN--SFYSQLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCceEEEEeCCCC----CCCCEEEEECCCCCCc--ccHHHHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 4688888999653 6799999999986542 2355566788999999999999874321 112345
Q ss_pred HHHHHHHHHHHHc--------CCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCC
Q 010654 324 TDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 324 ~D~~~~~~~l~~~--------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
+|..++++|+.+. ..+|++|++|+|||+||++++.++..+++ .+++++...|+...... ...
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~--~~~--- 174 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKG--KQT--- 174 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccc--cCC---
Confidence 6777777777652 23678899999999999999999988774 57888888776442100 000
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCC-----C----CCCChH-HHHHHHHHhcCCCCCeE
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP-----R----VMYSEP-AKFVAKLREMKTDDNIL 460 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~-----~----vp~~~~-~~~~~~L~~~~~~~~~~ 460 (505)
.| .. ..+.| ...++..| +|++++..|. . .|.... .+|+++.+. +..++
T Consensus 175 ---------~p---~i----l~~~~--~s~~~~~P-~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~ 232 (313)
T PLN00021 175 ---------PP---PV----LTYAP--HSFNLDIP-VLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHF 232 (313)
T ss_pred ---------CC---cc----cccCc--ccccCCCC-eEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---Ceeee
Confidence 01 00 01111 11225677 9999988763 2 234443 677766543 45555
Q ss_pred EEEecCCCCCCCC-CCh--------------------HHHHHHHHHHHHHHHHhhCCC
Q 010654 461 LFKCELGAGHFSK-SGR--------------------FERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 461 ~~~~~~~~gH~~~-~~~--------------------~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+.+ ++||... .+. ..+......+.+||.++|...
T Consensus 233 ~~~---~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 233 VAK---DYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred eec---CCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 666 7788421 111 111122334799999998654
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-14 Score=135.51 Aligned_cols=215 Identities=16% Similarity=0.161 Sum_probs=127.2
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|+++ |.|+.+|.||+|.+...-.. .........++|+.+.+..+++.-. .+
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~-~~~~~~~~~~~~~a~~l~~~l~~l~--~~ 102 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPR-SAPPNSFYTFETWGEQLNDFCSDVV--GD 102 (294)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccc-cccccccCCHHHHHHHHHHHHHHhc--CC
Confidence 378999999876543 466666777766 69999999999876431000 0000112445565555555444322 26
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh---------h-------hccCCCCC--------CCc----cc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL---------T-------TMLDPTIP--------LTT----AE 394 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~---------~-------~~~~~~~~--------~~~----~~ 394 (505)
++.++|||+||.+++.++.++|++++++|..++..... . ........ ... ..
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNI 182 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHH
Confidence 89999999999999999999999999999887643110 0 00000000 000 00
Q ss_pred c-cccCCC--CCHHHHHH----------------HHhCC----hhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 395 W-EEWGDP--WKEEFYFY----------------MKSYS----PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 395 ~-~~~g~~--~~~~~~~~----------------~~~~s----p~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
+ ..++.. ..++.... +..++ +...+.++++| +|+++|++|..+|...++.+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~~~~~-- 259 (294)
T PLN02824 183 LCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP-VLIAWGEKDPWEPVELGRAYANF-- 259 (294)
T ss_pred HHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC-eEEEEecCCCCCChHHHHHHHhc--
Confidence 0 001111 01111111 11111 12345677888 99999999999998877664332
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
....+++.++ ++||....+.++.+.. .+.+|+.++
T Consensus 260 --~~~~~~~~i~---~~gH~~~~e~p~~~~~--~i~~fl~~~ 294 (294)
T PLN02824 260 --DAVEDFIVLP---GVGHCPQDEAPELVNP--LIESFVARH 294 (294)
T ss_pred --CCccceEEeC---CCCCChhhhCHHHHHH--HHHHHHhcC
Confidence 2235677887 8899876655554433 578888653
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-14 Score=142.20 Aligned_cols=145 Identities=21% Similarity=0.270 Sum_probs=94.7
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc----hhHHHHHHCCcEEEEEcccCC
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~d~rG~ 303 (505)
...++.|+..+++.||..+...-+.+........+.|.|+++||...+...+... .....|+++||.|+.+|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 3478899999999999988765442222101123468899999986655443221 123357889999999999997
Q ss_pred CC-CchhHHHc-cc----ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecC
Q 010654 304 GE-LGRQWYEN-GK----FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAV 374 (505)
Q Consensus 304 ~~-~g~~~~~~-~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~ 374 (505)
+. +|...... .. ..+......|+.++++++.+.. .+++.++|||+||.+++.++ .+|+ .++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 63 23211110 01 1122234579999999998653 36899999999999988655 4676 456666666
Q ss_pred Cc
Q 010654 375 PF 376 (505)
Q Consensus 375 ~~ 376 (505)
|+
T Consensus 195 P~ 196 (395)
T PLN02872 195 PI 196 (395)
T ss_pred ch
Confidence 54
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.3e-14 Score=125.17 Aligned_cols=186 Identities=16% Similarity=0.081 Sum_probs=110.3
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
|.||++||..++...+........+.+. +|.|+.+|.||.+ ++..+.++.++++. +.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~--~~ 60 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEH--GG 60 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc--CC
Confidence 6899999987655442211222445443 8999999999752 23344455555442 23
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
+++.++|+|+||++++.++.++|. + +|..+|..+....... ........+..-...-..+..+.++...+.. ++
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i~- 134 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTD-YLGENENPYTGQQYVLESRHIYDLKVMQIDP-LE- 134 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHH-hcCCcccccCCCcEEEcHHHHHHHHhcCCcc-CC-
Confidence 589999999999999999999883 3 3556665553222110 0000000010000111234444444444433 33
Q ss_pred CCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 422 QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 422 ~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
...| ++++||++|+.||+.++.+++++. +.++++ |++|.+.. . + +....+.+|+.
T Consensus 135 ~~~~-v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~---ggdH~f~~-~-~--~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDL-IWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEE---GGNHAFVG-F-E--RYFNQIVDFLG 189 (190)
T ss_pred Chhh-EEEEEeCCCCcCCHHHHHHHHHhc-------ceEEEC---CCCcchhh-H-H--HhHHHHHHHhc
Confidence 4565 899999999999999999999843 345566 88998742 2 2 22334677763
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=131.91 Aligned_cols=189 Identities=17% Similarity=0.188 Sum_probs=107.9
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHH--HHHCCcEEEEEcccC---CCCCch---hHHHcccccC-CcchHHHHH----
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLS--LLDRGFIFAIAQIRG---GGELGR---QWYENGKFLK-KKNTFTDFI---- 327 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~--l~~~G~~v~~~d~rG---~~~~g~---~~~~~~~~~~-~~~~~~D~~---- 327 (505)
.+.|+||++||-.... ..+. .... .......++.++-+- ....|. .|........ ...+.+++.
T Consensus 12 ~~~~lvi~LHG~G~~~--~~~~-~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE--DLFA-LLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp T-SEEEEEE--TTS-H--HHHH-HHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCceEEEEECCCCCCc--chhH-HHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 5689999999964332 1111 1111 122366777765431 111222 5654221111 112233333
Q ss_pred ---HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCH
Q 010654 328 ---ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKE 404 (505)
Q Consensus 328 ---~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~ 404 (505)
+.++...+.+ ++++||.++|+|+||.+++.++.++|+.+.++++.+|..-..... .
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------------~ 147 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------------E 147 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------------H
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------------c
Confidence 3333333344 899999999999999999999999999999999999864321100 0
Q ss_pred HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHH
Q 010654 405 EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAA 484 (505)
Q Consensus 405 ~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 484 (505)
+ .+ .... ++| ++++||..|++||...+++.++.|++.+.++++..|+ +.||... . +.+.
T Consensus 148 ~--------~~-~~~~--~~p-i~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~---g~gH~i~---~---~~~~ 206 (216)
T PF02230_consen 148 D--------RP-EALA--KTP-ILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYP---GGGHEIS---P---EELR 206 (216)
T ss_dssp C--------CH-CCCC--TS--EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEET---T-SSS-----H---HHHH
T ss_pred c--------cc-cccC--CCc-EEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcC---CCCCCCC---H---HHHH
Confidence 0 00 0011 455 9999999999999999999999999999999999998 7899764 2 2344
Q ss_pred HHHHHHHHhh
Q 010654 485 FTYTFLMRAL 494 (505)
Q Consensus 485 ~~~~fl~~~l 494 (505)
.+.+||.+++
T Consensus 207 ~~~~~l~~~~ 216 (216)
T PF02230_consen 207 DLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHhhhC
Confidence 5788998763
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.2e-14 Score=125.76 Aligned_cols=128 Identities=20% Similarity=0.288 Sum_probs=97.5
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcc------
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENG------ 314 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~------ 314 (505)
+|.+.+++++.|++. .+..|+||++||+.++.........+..++++ ||.|++|| ++...|....
T Consensus 43 ~g~~r~y~l~vP~g~---~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~ 114 (312)
T COG3509 43 NGLKRSYRLYVPPGL---PSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFG 114 (312)
T ss_pred CCCccceEEEcCCCC---CCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCC
Confidence 567788999999986 23449999999987653322111233567774 99999994 3444442211
Q ss_pred --cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 315 --KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 315 --~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
....+..++..+.+.+..|+.+..|||.||+|.|.|.||.|+.+++..+|++|.++...++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 123445788999999999999999999999999999999999999999999999998888754
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-14 Score=131.71 Aligned_cols=206 Identities=18% Similarity=0.208 Sum_probs=120.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|+||++||...... .|......| +.||.|+.+|+||.|..... .....++++.+.+..+++.- +.
T Consensus 12 ~~~~li~~hg~~~~~~--~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~~--~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR--MWDPVLPAL-TPDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDHL--GI 78 (251)
T ss_pred CCCeEEEEcCcccchh--hHHHHHHHh-hcccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHh--CC
Confidence 4689999999654432 344444444 57999999999999865321 11234555555555544432 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--hccC---CCC--CCC---c---ccc--cccCCCCCH--
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TMLD---PTI--PLT---T---AEW--EEWGDPWKE-- 404 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~~~~---~~~--~~~---~---~~~--~~~g~~~~~-- 404 (505)
+++.++|+|+||.+++.++.++|+++++++..++...... .+.. ... ... . ..+ ..+..+...
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 6899999999999999999999999888887655321100 0000 000 000 0 000 001100000
Q ss_pred HHH----------------HHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 405 EFY----------------FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 405 ~~~----------------~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
+.+ ..+...+....+.++++| +|+++|++|..+|.+...++.+.+. ..+++.++ ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~ 230 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVP-TLCIAGDQDGSTPPELVREIADLVP----GARFAEIR---GA 230 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCC-eEEEEeccCCcCChHHHHHHHHhCC----CceEEEEC---CC
Confidence 000 011112223445667888 9999999999999988877776653 34677887 78
Q ss_pred CCCCCCChHHHHHHHHHHHHHH
Q 010654 469 GHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl 490 (505)
||......++.+.. .+.+||
T Consensus 231 gH~~~~~~p~~~~~--~i~~fl 250 (251)
T TIGR02427 231 GHIPCVEQPEAFNA--ALRDFL 250 (251)
T ss_pred CCcccccChHHHHH--HHHHHh
Confidence 99765444443322 345554
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-13 Score=130.87 Aligned_cols=224 Identities=17% Similarity=0.197 Sum_probs=130.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.+++.... . + +...|.||++||.++... .|......|. .+|.|+.+|+||.|.+... ...
T Consensus 9 ~~~~~~~~~~~-~-~----~~~~~plvllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~--------~~~ 71 (276)
T TIGR02240 9 LDGQSIRTAVR-P-G----KEGLTPLLIFNGIGANLE--LVFPFIEALD-PDLEVIAFDVPGVGGSSTP--------RHP 71 (276)
T ss_pred cCCcEEEEEEe-c-C----CCCCCcEEEEeCCCcchH--HHHHHHHHhc-cCceEEEECCCCCCCCCCC--------CCc
Confidence 36777765421 1 1 112367899999765443 3554455554 4799999999999876421 011
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh---------hhccCCC--C-
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL---------TTMLDPT--I- 388 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~---------~~~~~~~--~- 388 (505)
..++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++.+|..++..... ..+.... .
T Consensus 72 ~~~~~~~~~~~~~i~~l--~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (276)
T TIGR02240 72 YRFPGLAKLAARMLDYL--DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQ 149 (276)
T ss_pred CcHHHHHHHHHHHHHHh--CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhc
Confidence 23344444444333331 34679999999999999999999999999999887654210 0000000 0
Q ss_pred CCC----ccc-ccc-c-CCCCC--------------HHHHHHHH--hCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 389 PLT----TAE-WEE-W-GDPWK--------------EEFYFYMK--SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 389 ~~~----~~~-~~~-~-g~~~~--------------~~~~~~~~--~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
+.. ... +.. + ..+.. ...+.... .......+.++++| +|+++|++|+.+|+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~v~~~~~~~ 228 (276)
T TIGR02240 150 PSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQP-TLVLAGDDDPIIPLINMRL 228 (276)
T ss_pred cccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCC-EEEEEeCCCCcCCHHHHHH
Confidence 000 000 000 0 00000 00011111 11122345778898 9999999999999998888
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+.+.+.. .++++++ + ||....+.++.+.. .+.+|+++.-
T Consensus 229 l~~~~~~----~~~~~i~---~-gH~~~~e~p~~~~~--~i~~fl~~~~ 267 (276)
T TIGR02240 229 LAWRIPN----AELHIID---D-GHLFLITRAEAVAP--IIMKFLAEER 267 (276)
T ss_pred HHHhCCC----CEEEEEc---C-CCchhhccHHHHHH--HHHHHHHHhh
Confidence 8776643 4566665 4 99866555554433 5778887653
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=115.86 Aligned_cols=198 Identities=18% Similarity=0.167 Sum_probs=126.1
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC--C-cCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY--E-ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~--~-~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
+.+.+..+-|. +.+. +.|+.. ...|+.|.+|--| + ...+..-......|.++||+++.+|+||-|.++.+|
T Consensus 5 ~~v~i~Gp~G~-le~~-~~~~~~----~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 5 PTVIINGPAGR-LEGR-YEPAKT----PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred CcEEecCCccc-ceec-cCCCCC----CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 34455555553 5544 444432 4567777776322 1 111111122345788899999999999999887766
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
..|..+.+|..++++|+.++.- +..-..+.|+|+|+++++.++.+.|+. ...++..|..+..++
T Consensus 79 ------D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~~df-------- 142 (210)
T COG2945 79 ------DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINAYDF-------- 142 (210)
T ss_pred ------cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCchhh--------
Confidence 5566789999999999998743 222347899999999999999988753 444555554431100
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
+- +..... |.++|+|+.|++|++....+.++- .+.+.++.+ +++|
T Consensus 143 -----------------------s~---l~P~P~-~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~---~a~H 187 (210)
T COG2945 143 -----------------------SF---LAPCPS-PGLVIQGDADDVVDLVAVLKWQES-----IKITVITIP---GADH 187 (210)
T ss_pred -----------------------hh---ccCCCC-CceeEecChhhhhcHHHHHHhhcC-----CCCceEEec---CCCc
Confidence 00 111123 499999999998887666655433 566777887 8899
Q ss_pred CCCCChHHHHHHHHHHHHHHH
Q 010654 471 FSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++...... + ...+.+|+.
T Consensus 188 FF~gKl~~-l--~~~i~~~l~ 205 (210)
T COG2945 188 FFHGKLIE-L--RDTIADFLE 205 (210)
T ss_pred eecccHHH-H--HHHHHHHhh
Confidence 87532222 2 224677773
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.8e-13 Score=124.71 Aligned_cols=205 Identities=15% Similarity=0.134 Sum_probs=121.0
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC-Cc
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK-EK 343 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~r 343 (505)
.||++||.+.+. ..|......|.+.||.|+.+|+||.|.+... ......++++.+.+..+++. .+. ++
T Consensus 5 ~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDHK 73 (255)
T ss_pred EEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCCC
Confidence 489999987543 3466666788889999999999999866321 01122345544444443333 122 58
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCch---h-----hhhhccCCC-------------CCC----Cccccc-c
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---D-----VLTTMLDPT-------------IPL----TTAEWE-E 397 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~---d-----~~~~~~~~~-------------~~~----~~~~~~-~ 397 (505)
+.++||||||.++..++.++|++++.+|..++.. . ......... .+. ....+. .
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999999999999999999999888766531 1 000000000 000 000000 0
Q ss_pred --cCCCCCHHHHHHH-HhC--Chh----------hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 398 --WGDPWKEEFYFYM-KSY--SPV----------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 398 --~g~~~~~~~~~~~-~~~--sp~----------~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
+... ..+.+... ... .+. ....+++.| +|+++|++|..+|+..++.+++.+.. .+++++
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP-~lvi~g~~D~~~~~~~~~~~~~~~~~----a~~~~i 227 (255)
T PLN02965 154 YYYNQS-PLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVP-RVYIKTAKDNLFDPVRQDVMVENWPP----AQTYVL 227 (255)
T ss_pred HHhcCC-CHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCC-EEEEEcCCCCCCCHHHHHHHHHhCCc----ceEEEe
Confidence 0110 11100000 000 000 122357887 99999999999999888777766543 356777
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 463 KCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+ ++||....++++.+.. .+.+|+.
T Consensus 228 ~---~~GH~~~~e~p~~v~~--~l~~~~~ 251 (255)
T PLN02965 228 E---DSDHSAFFSVPTTLFQ--YLLQAVS 251 (255)
T ss_pred c---CCCCchhhcCHHHHHH--HHHHHHH
Confidence 7 8899876666665443 3455543
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-13 Score=128.89 Aligned_cols=121 Identities=18% Similarity=0.131 Sum_probs=79.7
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
.+...||.+|.... .+ ..+.+.||++||+++.... ......+...+|.|+.+|+||.|......
T Consensus 8 ~~~~~~~~~l~y~~---~g----~~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~------ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQ---SG----NPDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHA------ 71 (306)
T ss_pred eEEcCCCcEEEEEE---Cc----CCCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCC------
Confidence 34556787775432 11 1123568999998765432 12223455679999999999988653211
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
........|+.+.+..+.+.- +.+++.++|+|+||++++.++.++|++++++|...+
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred CcccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 111134456666666665542 236799999999999999999999999888777654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.6e-13 Score=126.85 Aligned_cols=210 Identities=13% Similarity=0.118 Sum_probs=123.1
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|++++ .|+.+|.||.|.+...- ....+.+..+.+..+++.- ..+
T Consensus 27 g~~vvllHG~~~~~~--~w~~~~~~L~~~~-~via~D~~G~G~S~~~~--------~~~~~~~~a~dl~~ll~~l--~~~ 93 (295)
T PRK03592 27 GDPIVFLHGNPTSSY--LWRNIIPHLAGLG-RCLAPDLIGMGASDKPD--------IDYTFADHARYLDAWFDAL--GLD 93 (295)
T ss_pred CCEEEEECCCCCCHH--HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh--CCC
Confidence 478999999876543 3555567787776 99999999998764321 1123344433333333331 236
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh---h----------hhhccCCCC--CCC--cccc-c----c-cC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD---V----------LTTMLDPTI--PLT--TAEW-E----E-WG 399 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d---~----------~~~~~~~~~--~~~--~~~~-~----~-~g 399 (505)
++.++|+|+||.+++.++.++|++++++|..++... + ...+..... .+. ...+ . . +.
T Consensus 94 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
T PRK03592 94 DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSIL 173 (295)
T ss_pred CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCccc
Confidence 899999999999999999999999999998776321 1 000110000 000 0000 0 0 00
Q ss_pred CCCCHHH-----------------HHHHHhCCh--------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHH
Q 010654 400 DPWKEEF-----------------YFYMKSYSP--------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVA 448 (505)
Q Consensus 400 ~~~~~~~-----------------~~~~~~~sp--------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~ 448 (505)
....++. ..+.....+ ...+.++++| +|+++|++|..+++.+..++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~ 252 (295)
T PRK03592 174 RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVP-KLLINAEPGAILTTGAIRDWCR 252 (295)
T ss_pred ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCC-eEEEeccCCcccCcHHHHHHHH
Confidence 0000110 001111000 1123567888 9999999999997666666654
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
.+.. ..++.+++ ++||....+.++.+.. .+.+|+.+..
T Consensus 253 ~~~~---~~~~~~i~---~~gH~~~~e~p~~v~~--~i~~fl~~~~ 290 (295)
T PRK03592 253 SWPN---QLEITVFG---AGLHFAQEDSPEEIGA--AIAAWLRRLR 290 (295)
T ss_pred Hhhh---hcceeecc---CcchhhhhcCHHHHHH--HHHHHHHHhc
Confidence 4332 34667787 7899876555554433 5788887653
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.5e-13 Score=127.88 Aligned_cols=206 Identities=17% Similarity=0.192 Sum_probs=120.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+||++||.++... .|......| +++|.|+.+|+||.|...... .....++++.+.+..+++.- +.+
T Consensus 28 ~~~vv~~hG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~~--~~~ 95 (278)
T TIGR03056 28 GPLLLLLHGTGASTH--SWRDLMPPL-ARSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAAE--GLS 95 (278)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHH-hhCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHHc--CCC
Confidence 589999999765432 244444555 457999999999988643211 11234556555555555542 235
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC----------CCCCC----------cccccc----c
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP----------TIPLT----------TAEWEE----W 398 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----------~~~~~----------~~~~~~----~ 398 (505)
++.++|||+||.+++.++.++|++++++++.++........... ..+.. ...+.. .
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT 175 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc
Confidence 78999999999999999999999888888776543211100000 00000 000000 0
Q ss_pred CCC---CCHHHH--------------HHHHhCC--h-hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCC
Q 010654 399 GDP---WKEEFY--------------FYMKSYS--P-VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 458 (505)
Q Consensus 399 g~~---~~~~~~--------------~~~~~~s--p-~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~ 458 (505)
+.. .....+ ..+...+ + ...++++++| +|+++|++|..+|+..++++.+.+. ..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~g~~D~~vp~~~~~~~~~~~~----~~~ 250 (278)
T TIGR03056 176 GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIP-LHLIAGEEDKAVPPDESKRAATRVP----TAT 250 (278)
T ss_pred ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCC-EEEEEeCCCcccCHHHHHHHHHhcc----CCe
Confidence 000 000000 0011111 1 1235667888 9999999999999988877766654 345
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 010654 459 ILLFKCELGAGHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 459 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 490 (505)
++.++ ++||.+....++.+. ..+.+|+
T Consensus 251 ~~~~~---~~gH~~~~e~p~~~~--~~i~~f~ 277 (278)
T TIGR03056 251 LHVVP---GGGHLVHEEQADGVV--GLILQAA 277 (278)
T ss_pred EEEEC---CCCCcccccCHHHHH--HHHHHHh
Confidence 67787 889987654444332 2466665
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.5e-13 Score=134.39 Aligned_cols=219 Identities=19% Similarity=0.207 Sum_probs=149.4
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC----CC--chhHHHHHHCCcEEEEEcccCCC
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP----AF--NSSRLSLLDRGFIFAIAQIRGGG 304 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~----~~--~~~~~~l~~~G~~v~~~d~rG~~ 304 (505)
+....+.++.+||.+|...|++|++. ++.|+++..+-.|-..... .. .+....|+++||+|+.+|.||++
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 56677889999999999999999875 8899999987333221110 01 11113789999999999999999
Q ss_pred CCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc
Q 010654 305 ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 384 (505)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~ 384 (505)
++...|.. ... .+.+|-.+.|+|++++++.+ .+||.+|.||+|+...++|+..|--.||++..++..|......
T Consensus 93 ~SeG~~~~----~~~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~~ 166 (563)
T COG2936 93 GSEGVFDP----ESS-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDDA 166 (563)
T ss_pred cCCcccce----ecc-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccccccc
Confidence 98777642 222 57899999999999999987 6899999999999999999888888899999988776322110
Q ss_pred --C----------------CCCCCC--------------c--ccccc------cCCCCC-------HHHHHHHHhCChhh
Q 010654 385 --D----------------PTIPLT--------------T--AEWEE------WGDPWK-------EEFYFYMKSYSPVD 417 (505)
Q Consensus 385 --~----------------~~~~~~--------------~--~~~~~------~g~~~~-------~~~~~~~~~~sp~~ 417 (505)
. ...++. . ..|.+ .+.|.. +...+.+++.+-..
T Consensus 167 ~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~~~ 246 (563)
T COG2936 167 FYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDRVA 246 (563)
T ss_pred ccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCccc
Confidence 0 000000 0 00100 011100 00001123344455
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
...+++.| +|.+.|-.|... ..+.+++..++.. +..+++-|-
T Consensus 247 d~~~i~vP-~L~i~gW~D~~l--~~~~~~~~~~~~r--~~~lvvgPw 288 (563)
T COG2936 247 DLSKIKVP-ALVIGGWSDGYL--HTAIKLFAFLRSR--PVKLVVGPW 288 (563)
T ss_pred ccccCCCc-EEEEcccccccc--cchHHHhhhcccC--CceeEEccc
Confidence 67788998 999999999744 6678888888775 455666664
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=132.89 Aligned_cols=212 Identities=17% Similarity=0.226 Sum_probs=123.0
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|. .+|.|+.+|+||.|.....- .....+++..+.+..+++.- ..+
T Consensus 88 gp~lvllHG~~~~~~--~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~~l~~~l~~l--~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRNIGVLA-KNYTVYAIDLLGFGASDKPP-------GFSYTMETWAELILDFLEEV--VQK 155 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEECCCCCCCCCCCC-------CccccHHHHHHHHHHHHHHh--cCC
Confidence 478999999876533 3555555565 48999999999998753210 01123344443333333321 236
Q ss_pred cEEEEeeChHHHHHHHHHh-hCCCceeEEEecCCchhh---------hhhccCCC---------CC-CC--------ccc
Q 010654 343 KLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDV---------LTTMLDPT---------IP-LT--------TAE 394 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~---------~~~~~~~~---------~~-~~--------~~~ 394 (505)
++.++|+|+||.+++.++. .+|++++++|..++.... ........ .+ .. ...
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRD 235 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHH
Confidence 8999999999999888776 469999999877653210 00000000 00 00 000
Q ss_pred -c-----cccCCC--CCHHH----------------HHHHHh----CChhhcccCCCCCeEEEEccCCCCCCCCChH-HH
Q 010654 395 -W-----EEWGDP--WKEEF----------------YFYMKS----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AK 445 (505)
Q Consensus 395 -~-----~~~g~~--~~~~~----------------~~~~~~----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~-~~ 445 (505)
. ..+..+ ..++. +..+.. .+....+.++++| +|+++|++|..+|+... .+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-tLii~G~~D~~~p~~~~~~~ 314 (360)
T PLN02679 236 NLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLP-ILVLWGDQDPFTPLDGPVGK 314 (360)
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCC-EEEEEeCCCCCcCchhhHHH
Confidence 0 001111 01111 111110 1122345677898 99999999999998753 24
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+++.|.+.-...++++++ ++||....+.++.+.. .+.+||.+
T Consensus 315 ~~~~l~~~ip~~~l~~i~---~aGH~~~~E~Pe~~~~--~I~~FL~~ 356 (360)
T PLN02679 315 YFSSLPSQLPNVTLYVLE---GVGHCPHDDRPDLVHE--KLLPWLAQ 356 (360)
T ss_pred HHHhhhccCCceEEEEcC---CCCCCccccCHHHHHH--HHHHHHHh
Confidence 555665554567788888 8899877666665544 57888865
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-12 Score=129.46 Aligned_cols=184 Identities=7% Similarity=-0.004 Sum_probs=126.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ceeEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s 84 (505)
|..+||++++.++ +.+.|... +.....+.|||||++|++......+.+||++|++++. .++|+.... .....||
T Consensus 211 ~~~~Iyv~dl~tg--~~~~lt~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~~~d~~p~~S 285 (419)
T PRK04043 211 RKPTLYKYNLYTG--KKEKIASS--QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYPGIDVNGNFV 285 (419)
T ss_pred CCCEEEEEECCCC--cEEEEecC--CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCCCccCccEEC
Confidence 4568999999875 45566542 3345567899999999999877678899999999987 888886552 2234599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecC------CeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREG------GLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~------~~~~l~~~~~~~ 156 (505)
|||++|+|.+++.+ ..+||++++++ +..+ .++..... ...|++| .++++.... +..++++++++
T Consensus 286 PDG~~I~F~Sdr~g--~~~Iy~~dl~~-g~~~-rlt~~g~~---~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~- 357 (419)
T PRK04043 286 EDDKRIVFVSDRLG--YPNIFMKKLNS-GSVE-QVVFHGKN---NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN- 357 (419)
T ss_pred CCCCEEEEEECCCC--CceEEEEECCC-CCeE-eCccCCCc---CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC-
Confidence 99999999998743 35999999987 5543 23322222 1356554 677776554 33578888876
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++..++|+.+. ....++++|||+.++|.... ..-..|+.+++.+..
T Consensus 358 -~g~~~~LT~~~---------~~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~~ 403 (419)
T PRK04043 358 -SDYIRRLTANG---------VNQFPRFSSDGGSIMFIKYL-GNQSALGIIRLNYNK 403 (419)
T ss_pred -CCCeEECCCCC---------CcCCeEECCCCCEEEEEEcc-CCcEEEEEEecCCCe
Confidence 34344554321 11235688999999888654 444578899886544
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.3e-13 Score=128.36 Aligned_cols=107 Identities=17% Similarity=0.099 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|.||++||++++... .|......+.+.||.|+.+|.||.|...... .......++++.+.+..+++.- +.
T Consensus 24 ~~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~ 95 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELEEVREKL--GL 95 (288)
T ss_pred CCCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHHHHHHHc--CC
Confidence 35788999998765432 1222233444459999999999988643210 0110134555555555555542 33
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+++.++|||+||.+++.++..+|+++++++..+++
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 57999999999999999999999999999887664
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=129.68 Aligned_cols=208 Identities=16% Similarity=0.158 Sum_probs=119.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
...|.||++||.++... .|......| ..+|.|+.+|.||.|...... ........+|+.++++++ .
T Consensus 14 ~~~~~iv~lhG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~s~~~~-----~~~~~~~~~d~~~~l~~l------~ 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD--NLGVLARDL-VNDHDIIQVDMRNHGLSPRDP-----VMNYPAMAQDLLDTLDAL------Q 79 (255)
T ss_pred CCCCCEEEECCCCCchh--HHHHHHHHH-hhCCeEEEECCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHc------C
Confidence 45688999999876543 244444444 457999999999988654311 011112344555544443 3
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC--Cchhhh----------hhccCCCCCC------------Cccccc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV--PFVDVL----------TTMLDPTIPL------------TTAEWE 396 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~----------~~~~~~~~~~------------~~~~~~ 396 (505)
.+++.++|||+||.+++.++.++|+++++++... |..... .......... ......
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHH
Confidence 3679999999999999999999999999988753 211100 0000000000 000000
Q ss_pred -----ccCCC----CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 397 -----EWGDP----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 397 -----~~g~~----~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
.+... ..+..+..+........+.++++| +|+++|++|..++...++.+.+.+. ..++++++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~ 231 (255)
T PRK10673 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHP-ALFIRGGNSPYVTEAYRDDLLAQFP----QARAHVIA---G 231 (255)
T ss_pred HHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCC-eEEEECCCCCCCCHHHHHHHHHhCC----CcEEEEeC---C
Confidence 00000 000111111111122234556787 9999999999998876666655443 45677787 8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+||......++.+. ..+..||.+
T Consensus 232 ~gH~~~~~~p~~~~--~~l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAEKPDAVL--RAIRRYLND 254 (255)
T ss_pred CCCeeeccCHHHHH--HHHHHHHhc
Confidence 89977655554332 246778764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-13 Score=126.04 Aligned_cols=130 Identities=14% Similarity=0.028 Sum_probs=92.0
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
+.+.+.. +|..+.+.++.|.+. +.|.||++|||+...... .+......|+++||.|+.+|+||.|.+....
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~-----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~- 75 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGAS-----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN- 75 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCC-----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 3566664 567888998888643 235788888876543221 1223456888999999999999998653221
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
.......+|+.++++++.++.. ..++|.++|+|+||++++.++.. +..++++|..+|..
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 1112456899999999987521 12679999999999999888764 56899999998864
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-12 Score=119.77 Aligned_cols=215 Identities=13% Similarity=0.020 Sum_probs=134.4
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC--CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.+.+++..|. +.++++.|++. ++.|+||++||..+... ...|......|+++||.|+.+|+||+|........
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~ 76 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA 76 (266)
T ss_pred CEEecCCCCc-EEEEEecCCCC----CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc
Confidence 3556677776 44664545432 44689999999654222 12233345688889999999999999866433211
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc--------
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML-------- 384 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-------- 384 (505)
.......+|+..+++++.+.+ .++|.++|+|+||.+++.++.++|+.++++|..+|+++...++.
T Consensus 77 ----~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~ 149 (266)
T TIGR03101 77 ----ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLV 149 (266)
T ss_pred ----CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHH
Confidence 111234688999999998764 36899999999999999999999999999999999776332211
Q ss_pred ----CCCCCC-----C----cccccc-cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCC-CCCCCCChHHHHHHH
Q 010654 385 ----DPTIPL-----T----TAEWEE-WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAK 449 (505)
Q Consensus 385 ----~~~~~~-----~----~~~~~~-~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~-D~~vp~~~~~~~~~~ 449 (505)
...... . ..+..+ .|..-.++....+.+.+....+.. .. ++|++.-.. +..-+.....++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 227 (266)
T TIGR03101 150 ARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NC-PVHWFEVRPEEGATLSPVFSRLGEQ 227 (266)
T ss_pred HHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CC-ceEEEEeccccCCCCCHHHHHHHHH
Confidence 100000 0 000001 132223444444443333222211 22 477775532 223344567899999
Q ss_pred HHhcCCCCCeEEEE
Q 010654 450 LREMKTDDNILLFK 463 (505)
Q Consensus 450 L~~~~~~~~~~~~~ 463 (505)
+++.|+.++...|+
T Consensus 228 ~~~~g~~v~~~~~~ 241 (266)
T TIGR03101 228 WVQSGVEVTVDLVP 241 (266)
T ss_pred HHHcCCeEeeeecC
Confidence 99999999988888
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.9e-13 Score=123.12 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=73.9
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKE 342 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 342 (505)
|+||++||.++... .|......|+ +||.|+.+|.||.|..... .......++++... +..+.+. .+.+
T Consensus 2 ~~vv~~hG~~~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGIE 70 (251)
T ss_pred CEEEEEcCCCCchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCCC
Confidence 78999999765543 3555556776 8999999999998865321 11122344554444 4444443 2457
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.++|||+||.+++.++.++|+.+++++..++..
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 89999999999999999999999999998877643
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=126.87 Aligned_cols=198 Identities=15% Similarity=0.115 Sum_probs=116.6
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.++... .|......|. .+|.|+.+|+||.|..... ....++++.+ .+.+. . .++
T Consensus 5 ~~iv~~HG~~~~~~--~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~~~~~~~~---~~~~~--~-~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMNAE--VFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------GPLSLADAAE---AIAAQ--A-PDP 66 (245)
T ss_pred ceEEEEcCCCCchh--hHHHHHHhhc-cCeEEEEecCCcCccCCCC---------CCcCHHHHHH---HHHHh--C-CCC
Confidence 78999999755432 3444445554 5799999999998864321 1123444443 33332 1 268
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--hcc---------------CCCCCCCcccc---cccCCCC-
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TML---------------DPTIPLTTAEW---EEWGDPW- 402 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~~~---------------~~~~~~~~~~~---~~~g~~~- 402 (505)
+.++|+|+||++++.++.++|++++++|..++...+.. .+. ..........+ ..++.+.
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999887655321100 000 00000000000 0011110
Q ss_pred CH---------------------HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 403 KE---------------------EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 403 ~~---------------------~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
.. ..+..+...+....+.++++| +|+++|++|..+|+..++.+.+.+. .+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~ 221 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVP-FLRLYGYLDGLVPAKVVPYLDKLAP----HSELYI 221 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCC-EEEEeecCCcccCHHHHHHHHHhCC----CCeEEE
Confidence 00 001111112223445678898 9999999999999988877766553 467788
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHH
Q 010654 462 FKCELGAGHFSKSGRFERLREAAFTYTF 489 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~~~~~~~~~~~~~f 489 (505)
++ ++||......++.+.. .+.+|
T Consensus 222 ~~---~~gH~~~~e~p~~~~~--~i~~f 244 (245)
T TIGR01738 222 FA---KAAHAPFLSHAEAFCA--LLVAF 244 (245)
T ss_pred eC---CCCCCccccCHHHHHH--HHHhh
Confidence 88 8899876555554433 34444
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-12 Score=123.86 Aligned_cols=198 Identities=20% Similarity=0.215 Sum_probs=129.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCC---CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKL---DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~---~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
.-++..++.+||-.+....+.++.. .. .+..|+||++||-.+++....-........++||.|++.|.||.++..-
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~-~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDS-RCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCccc-ccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 3455556778888888877766553 21 2457999999998776655333333445666899999999999776432
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCchhhh---hh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVL---TT 382 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d~~---~~ 382 (505)
.- ....-...-+|+..+++++.++-- ..++.++|.|+||.+...++++..+ +.+|++..+|. |.. ..
T Consensus 171 tT----pr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~~~~~~ 243 (409)
T KOG1838|consen 171 TT----PRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLLAASRS 243 (409)
T ss_pred CC----CceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc-hhhhhhhH
Confidence 11 111222456999999999998732 2479999999999999998887433 45555555663 311 00
Q ss_pred cc---------------------CCCC-----------C---CCccccc------ccCCCCCHHHHHHHHhCChhhcccC
Q 010654 383 ML---------------------DPTI-----------P---LTTAEWE------EWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 383 ~~---------------------~~~~-----------~---~~~~~~~------~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
+. .... . -+..++. .+|.+.-. +++++.|+...+++
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~d---eYY~~aSs~~~v~~ 320 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVD---EYYKKASSSNYVDK 320 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHH---HHHhhcchhhhccc
Confidence 00 0000 0 0001111 13444322 45588899999999
Q ss_pred CCCCeEEEEccCCCCCCCCC
Q 010654 422 QNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 422 ~~~Pp~Li~~G~~D~~vp~~ 441 (505)
|+.| +|+|++.+|+++|..
T Consensus 321 I~VP-~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 321 IKVP-LLCINAADDPVVPEE 339 (409)
T ss_pred cccc-EEEEecCCCCCCCcc
Confidence 9998 999999999999985
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-12 Score=128.32 Aligned_cols=216 Identities=15% Similarity=0.116 Sum_probs=122.6
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHH-HHHHHH-HHHHHcCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT-DFIACA-EYLIKNCYC 339 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~-D~~~~~-~~l~~~~~~ 339 (505)
+.|+||++||.++... .|......|++ +|.|+.+|+||.|.....-. ......... .+.+.+ +++...
T Consensus 104 ~~p~vvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~----~~~~~~~~~~~~~~~i~~~~~~l--- 173 (402)
T PLN02894 104 DAPTLVMVHGYGASQG--FFFRNFDALAS-RFRVIAIDQLGWGGSSRPDF----TCKSTEETEAWFIDSFEEWRKAK--- 173 (402)
T ss_pred CCCEEEEECCCCcchh--HHHHHHHHHHh-CCEEEEECCCCCCCCCCCCc----ccccHHHHHHHHHHHHHHHHHHc---
Confidence 4689999999865432 24344455654 69999999999987643110 000001111 222223 333333
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--h----cc----------------CCCCC--------
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--T----ML----------------DPTIP-------- 389 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~----~~----------------~~~~~-------- 389 (505)
+.+++.++|||+||++++.++.++|++++++|..+|..-... . .. ....|
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 253 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLG 253 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhcc
Confidence 346899999999999999999999999999887765321000 0 00 00000
Q ss_pred -CC---cccc--ccc-----C--CC-CCHHHH-H-----------------HHH-----hCChh-hcccCCCCCeEEEEc
Q 010654 390 -LT---TAEW--EEW-----G--DP-WKEEFY-F-----------------YMK-----SYSPV-DNVKAQNYPHILVTA 431 (505)
Q Consensus 390 -~~---~~~~--~~~-----g--~~-~~~~~~-~-----------------~~~-----~~sp~-~~~~~~~~Pp~Li~~ 431 (505)
+. ...+ ..+ + .. ...+.+ + ++. ...|+ ..+.++++| +|+++
T Consensus 254 p~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP-~liI~ 332 (402)
T PLN02894 254 PWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVP-TTFIY 332 (402)
T ss_pred chhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCC-EEEEE
Confidence 00 0000 000 0 00 011100 0 110 11232 346777898 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
|++|..++ ....++.+.+ +.++++++++ ++||....+.++.+.. .+.+|+...+...
T Consensus 333 G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~---~aGH~~~~E~P~~f~~--~l~~~~~~~~~~~ 389 (402)
T PLN02894 333 GRHDWMNY-EGAVEARKRM---KVPCEIIRVP---QGGHFVFLDNPSGFHS--AVLYACRKYLSPD 389 (402)
T ss_pred eCCCCCCc-HHHHHHHHHc---CCCCcEEEeC---CCCCeeeccCHHHHHH--HHHHHHHHhccCC
Confidence 99997654 5555544433 4457788888 8899876666665544 5778888877653
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.5e-13 Score=131.78 Aligned_cols=206 Identities=14% Similarity=0.141 Sum_probs=120.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
++.|.||++||.++.... |......|. ++|.|+.+|+||+|..... .....+.++.+.+..+++. ++
T Consensus 129 ~~~~~vl~~HG~~~~~~~--~~~~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~ 195 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN--WLFNHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LG 195 (371)
T ss_pred CCCCeEEEECCCCCccch--HHHHHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cC
Confidence 345889999987654332 443444544 4699999999999875321 1123456666666666554 45
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-------hhccCCCCCCCcccc--cccCCC--CC------
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-------TTMLDPTIPLTTAEW--EEWGDP--WK------ 403 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-------~~~~~~~~~~~~~~~--~~~g~~--~~------ 403 (505)
+.++.++|||+||++++.++.++|++++++++.+|..... ..+...........+ ..+..+ ..
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVED 275 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHH
Confidence 5789999999999999999998999999998877642110 000000000000000 000000 00
Q ss_pred ----------HHHHHHHH---------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 404 ----------EEFYFYMK---------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 404 ----------~~~~~~~~---------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
...+..+. ..+....+.++++| +|++||++|..+|+.++..+. ..+++.+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~vp~~~~~~l~-------~~~~~~~~~- 346 (371)
T PRK14875 276 LLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIP-VLVIWGEQDRIIPAAHAQGLP-------DGVAVHVLP- 346 (371)
T ss_pred HHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCC-EEEEEECCCCccCHHHHhhcc-------CCCeEEEeC-
Confidence 00000000 01222345677888 999999999999987765442 135667777
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 465 ELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 465 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++||......++.+. ..+.+||.+
T Consensus 347 --~~gH~~~~e~p~~~~--~~i~~fl~~ 370 (371)
T PRK14875 347 --GAGHMPQMEAAADVN--RLLAEFLGK 370 (371)
T ss_pred --CCCCChhhhCHHHHH--HHHHHHhcc
Confidence 889976544443322 235567654
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.7e-13 Score=130.67 Aligned_cols=217 Identities=14% Similarity=0.175 Sum_probs=120.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHH-------HHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLS-------LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLI 334 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~-------l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~ 334 (505)
.|.||++||++++...+.-...... +..++|.|+.+|+||+|.+...-. ..........++++.+.+ ..+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~-~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD-GLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc-CCCCCCCcccHHHHHHHHHHHHH
Confidence 5889999998765433210011112 225789999999999986532100 000000123456665443 3343
Q ss_pred HcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCCch------hh-hhh-----cc-CC-----CCCCCccc-
Q 010654 335 KNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV------DV-LTT-----ML-DP-----TIPLTTAE- 394 (505)
Q Consensus 335 ~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~------d~-~~~-----~~-~~-----~~~~~~~~- 394 (505)
+.-.+ +++. |+|+|+||++++.++.++|++++++|..++.. ++ ... .. .. ........
T Consensus 148 ~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
T PRK06489 148 EGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSL 225 (360)
T ss_pred HhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 43222 5664 89999999999999999999999998775531 00 000 00 00 00000000
Q ss_pred ---c---c--------cc--CCCC------------------CHHHH----HHHHhCChhhcccCCCCCeEEEEccCCCC
Q 010654 395 ---W---E--------EW--GDPW------------------KEEFY----FYMKSYSPVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 395 ---~---~--------~~--g~~~------------------~~~~~----~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
+ . .+ ..+. +...+ ......+....+.++++| +|+++|++|.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~P-vLvI~G~~D~ 304 (360)
T PRK06489 226 KRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAP-VLAINSADDE 304 (360)
T ss_pred HHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCC-EEEEecCCCc
Confidence 0 0 00 0000 01110 001112333456778998 9999999999
Q ss_pred CCCCChH--HHHHHHHHhcCCCCCeEEEEecCC----CCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 437 RVMYSEP--AKFVAKLREMKTDDNILLFKCELG----AGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 437 ~vp~~~~--~~~~~~L~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.+|+..+ +++++.+. ..++++++ + +||... ..++.+.. .+.+||.+.
T Consensus 305 ~~p~~~~~~~~la~~ip----~a~l~~i~---~a~~~~GH~~~-e~P~~~~~--~i~~FL~~~ 357 (360)
T PRK06489 305 RNPPETGVMEAALKRVK----HGRLVLIP---ASPETRGHGTT-GSAKFWKA--YLAEFLAQV 357 (360)
T ss_pred ccChhhHHHHHHHHhCc----CCeEEEEC---CCCCCCCcccc-cCHHHHHH--HHHHHHHhc
Confidence 9998876 56665553 35678888 5 499765 45555444 477888764
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=131.02 Aligned_cols=125 Identities=13% Similarity=0.110 Sum_probs=81.8
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchh-HHHHH---HCCcEEEEEcccCCCCCchhHHH
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS-RLSLL---DRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~-~~~l~---~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.|.+..|.+++....-|++. ...|.||++||.++... .|... ...|+ +++|.|+.+|+||.|.+...
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p--- 249 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP--- 249 (481)
T ss_pred eeEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC---
Confidence 34444556776665445432 23478999999876543 23321 23343 47999999999998865421
Q ss_pred cccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 313 NGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
......+++..+.+. .+++.- ..+++.++|||+||.+++.++.++|++++++|..++.
T Consensus 250 ----~~~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 250 ----ADSLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ----CCCcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 011133455555442 344432 2368999999999999999999999999999988753
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.9e-13 Score=116.30 Aligned_cols=184 Identities=16% Similarity=0.159 Sum_probs=121.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc-------chHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK-------NTFTDFIACAEYL 333 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~-------~~~~D~~~~~~~l 333 (505)
...|+||++||..+. ...|.+ ...+..-.+.++.+.-+-.-..+..|.. ....+. ...+.+.++++.+
T Consensus 16 p~~~~iilLHG~Ggd--e~~~~~-~~~~~~P~~~~is~rG~v~~~g~~~~f~--~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 16 PAAPLLILLHGLGGD--ELDLVP-LPELILPNATLVSPRGPVAENGGPRFFR--RYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCcEEEEEecCCCC--hhhhhh-hhhhcCCCCeEEcCCCCccccCccccee--ecCCCccchhhHHHHHHHHHHHHHHH
Confidence 457899999996543 222333 2222223466666644333222333321 111111 2334445566666
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhC
Q 010654 334 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSY 413 (505)
Q Consensus 334 ~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 413 (505)
.++..+|++|+.+.|+|.|+.+++.++.++|++|+++++..|..-....
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~------------------------------- 139 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE------------------------------- 139 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------------------------------
Confidence 6677789999999999999999999999999999999999885321100
Q ss_pred ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 414 SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 414 sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+..+. ..+ |||++||+.|++||...+.++.+.|++.|.+++...++ .||.... + .+..+..|+.+.
T Consensus 140 -~~~~~--~~~-pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~----~GH~i~~---e---~~~~~~~wl~~~ 205 (207)
T COG0400 140 -LLPDL--AGT-PILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE----GGHEIPP---E---ELEAARSWLANT 205 (207)
T ss_pred -ccccc--CCC-eEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec----CCCcCCH---H---HHHHHHHHHHhc
Confidence 00001 124 59999999999999999999999999999999888775 5997642 2 223456688765
Q ss_pred h
Q 010654 494 L 494 (505)
Q Consensus 494 l 494 (505)
+
T Consensus 206 ~ 206 (207)
T COG0400 206 L 206 (207)
T ss_pred c
Confidence 4
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.5e-12 Score=115.38 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=75.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..|+|+++||-|....+ |......|+++||.|+++|.||.|.....-.. ....-.....|+.+.++.|.
T Consensus 42 ~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~--~~Yt~~~l~~di~~lld~Lg------ 111 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHI--SEYTIDELVGDIVALLDHLG------ 111 (322)
T ss_pred CCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCCCc--ceeeHHHHHHHHHHHHHHhc------
Confidence 457999999999987655 34445789999999999999988764321100 00001123445555444443
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
-+|+.++||++|+.++..++..+|++.++.|....
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv 146 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNV 146 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChhhcceEEEecC
Confidence 37999999999999999999999999999987654
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-12 Score=127.09 Aligned_cols=109 Identities=20% Similarity=0.189 Sum_probs=76.0
Q ss_pred CCcEEEEEcCCCCcCC---CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 262 SDPLLLYGYGSYEICN---DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~---~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
+.| ||++||-..... ...+......|+++||.|+.+|+||.+..... .........|+.++++++.++..
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------LTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------CCHHHHHHHHHHHHHHHHHHHhC
Confidence 345 788887432111 11233456789999999999999987642111 01111222457888999987642
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 379 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~ 379 (505)
.+++.++|||+||.+++.++..+|+.+++++..++..+.
T Consensus 135 --~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 135 --LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred --CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 368999999999999999999899999999988887664
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.1e-12 Score=125.55 Aligned_cols=112 Identities=14% Similarity=0.082 Sum_probs=73.2
Q ss_pred CcEEEEEcCCCCcCCCC---------CCchhH---HHHHHCCcEEEEEcccC--CCCCch-hHHHccc--c-cCCcchHH
Q 010654 263 DPLLLYGYGSYEICNDP---------AFNSSR---LSLLDRGFIFAIAQIRG--GGELGR-QWYENGK--F-LKKKNTFT 324 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~rG--~~~~g~-~~~~~~~--~-~~~~~~~~ 324 (505)
.|.||++||..++.... .|.... ..|..++|.|+.+|+|| +|..+. .+...+. . ......++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999976643211 122221 25557899999999999 343332 1110010 0 11134567
Q ss_pred HHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 325 DFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 325 D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
|+.+.+..+++.-.+ ++ +.++|+|+||.+++.++.++|++++.+|+.++.
T Consensus 111 ~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 111 DDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 777766666554322 56 899999999999999999999999988877654
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.3e-14 Score=127.28 Aligned_cols=189 Identities=20% Similarity=0.262 Sum_probs=114.0
Q ss_pred EEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEE
Q 010654 266 LLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 345 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~ 345 (505)
||++||.++.. ..|......| ++||.|+.+|+||.|...... ......+++..+.+..+++.-. .+++.
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~l~~~l~~~~--~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPP------DYSPYSIEDYAEDLAELLDALG--IKKVI 69 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHS------SGSGGSHHHHHHHHHHHHHHTT--TSSEE
T ss_pred eEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEecCCcccccccc------ccCCcchhhhhhhhhhcccccc--ccccc
Confidence 78999987654 3466666677 589999999999988754321 1122334444444444444322 26899
Q ss_pred EEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc--------cCCCCC--------CCcccccccCCCC-CHH---
Q 010654 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--------LDPTIP--------LTTAEWEEWGDPW-KEE--- 405 (505)
Q Consensus 346 i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~--------~~~~~~--------~~~~~~~~~g~~~-~~~--- 405 (505)
++|||+||.+++.++.++|++++++|..+|........ ...... +....+..+-... ..+
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998877432110 000000 0000000000000 000
Q ss_pred -----HHHHH----HhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 406 -----FYFYM----KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 406 -----~~~~~----~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
..+.+ ...++...+.++++| +++++|+.|..++.....++.+.+ ..++++.++ ++||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-vl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~---~~gH~~~ 218 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPRIKVP-VLVIHGEDDPIVPPESAEELADKL----PNAELVVIP---GAGHFLF 218 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGSSSE-EEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEET---TSSSTHH
T ss_pred ccccccccccccccccccccccccccCCC-eEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEEC---CCCCccH
Confidence 00111 112333556677887 999999999999965555555444 356778887 8899753
|
... |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.9e-12 Score=121.92 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=73.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+... ..|......| .++|.|+.+|+||.|.+... ......++++.+.+..++++- +.+
T Consensus 34 ~~~iv~lHG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~ 101 (286)
T PRK03204 34 GPPILLCHGNPTWS--FLYRDIIVAL-RDRFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDHL--GLD 101 (286)
T ss_pred CCEEEEECCCCccH--HHHHHHHHHH-hCCcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHh--CCC
Confidence 47899999986422 2244434444 45799999999999865431 111235677777777777653 346
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++.++|||+||.++..++..+|++++++|..++.
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 7999999999999999999999999998876553
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-12 Score=128.13 Aligned_cols=220 Identities=15% Similarity=0.085 Sum_probs=120.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCCCchhHHHccc---ccCCcchH-HHHHHHHHHHHH-
Q 010654 262 SDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELGRQWYENGK---FLKKKNTF-TDFIACAEYLIK- 335 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~---~~~~~~~~-~D~~~~~~~l~~- 335 (505)
+.|+||+.||+.+....+.+.. ....|...+|.|+++|.||.|.+......... .......+ +|+.+.+..+.+
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 4577777777654433221110 01256567899999999999875432110000 00001123 444443444544
Q ss_pred cCCCCCCcE-EEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh-----------hhhccC-CCC--------C-----
Q 010654 336 NCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV-----------LTTMLD-PTI--------P----- 389 (505)
Q Consensus 336 ~~~~d~~rv-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~-----------~~~~~~-~~~--------~----- 389 (505)
.+. +++ .|+|+|+||++++.++.++|++++.+|..++.... ...+.. ... +
T Consensus 120 lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (339)
T PRK07581 120 FGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLR 196 (339)
T ss_pred hCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHH
Confidence 332 674 68999999999999999999999988877442210 000000 000 0
Q ss_pred -----C----Ccccc-cc-----cC----------------CCCCHHHHHH----HHh----------CChhhcccCCCC
Q 010654 390 -----L----TTAEW-EE-----WG----------------DPWKEEFYFY----MKS----------YSPVDNVKAQNY 424 (505)
Q Consensus 390 -----~----~~~~~-~~-----~g----------------~~~~~~~~~~----~~~----------~sp~~~~~~~~~ 424 (505)
. ....+ .. .+ ...++..+.. +.. .+....+.++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~ 276 (339)
T PRK07581 197 AHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITA 276 (339)
T ss_pred HHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCC
Confidence 0 00000 00 00 0000000000 000 011234556789
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC-CCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG-AGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
| +|+++|+.|..+|+..++.+.+.+.. .++++++ + +||......+..+.. .+.+|+.+.+
T Consensus 277 P-tLvI~G~~D~~~p~~~~~~l~~~ip~----a~l~~i~---~~~GH~~~~~~~~~~~~--~~~~~~~~~~ 337 (339)
T PRK07581 277 K-TFVMPISTDLYFPPEDCEAEAALIPN----AELRPIE---SIWGHLAGFGQNPADIA--FIDAALKELL 337 (339)
T ss_pred C-EEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEeC---CCCCccccccCcHHHHH--HHHHHHHHHH
Confidence 8 99999999999999888887776643 4677787 7 799765545554443 5778887765
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-11 Score=123.50 Aligned_cols=192 Identities=11% Similarity=0.050 Sum_probs=123.7
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcE--EEEEeccccceEEEEEeCCCCCceeeeecccccee-E
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKF--LFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 81 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~--i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~ 81 (505)
.+..+||+.|.... ..+.+... ......|+|||||+. ++|.+......+||++++++++ .++++....... .
T Consensus 162 ~~~~~l~~~d~dG~--~~~~lt~~--~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~-~~~lt~~~g~~~~p 236 (428)
T PRK01029 162 LKQGELWSVDYDGQ--NLRPLTQE--HSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA-GKKILALQGNQLMP 236 (428)
T ss_pred cccceEEEEcCCCC--CceEcccC--CCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCC-ceEeecCCCCccce
Confidence 35778999998543 34555543 224468999999987 4446665567899999999996 777775442222 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEe--eCCC--CCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLAC--PVDN--TSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~--~~~~--~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
.|||||++|+|.++..+. ..+|+. +++. .+..+ .++.........+.|++| .|++....++..++++++++
T Consensus 237 ~wSPDG~~Laf~s~~~g~--~di~~~~~~~~~g~~g~~~-~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~ 313 (428)
T PRK01029 237 TFSPRKKLLAFISDRYGN--PDLFIQSFSLETGAIGKPR-RLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQID 313 (428)
T ss_pred EECCCCCEEEEEECCCCC--cceeEEEeecccCCCCcce-EeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECc
Confidence 499999999999876433 356654 5443 12334 344332222346788876 57777767777788888876
Q ss_pred CCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 156 AVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+...+.|+. .. .....+.++|||+.++|..... ...+|+++++.+++
T Consensus 314 ~~g~~~~~lt~------~~--~~~~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~ 362 (428)
T PRK01029 314 PEGQSPRLLTK------KY--RNSSCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGR 362 (428)
T ss_pred ccccceEEecc------CC--CCccceeECCCCCEEEEEEcCC-CCcEEEEEECCCCC
Confidence 43332322221 11 1123356889999998876543 24589999998887
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.1e-11 Score=119.14 Aligned_cols=188 Identities=10% Similarity=0.072 Sum_probs=126.6
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEe
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAA 83 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~ 83 (505)
.+.++||++|.... ..+.+... ......++|||||++|+|.+.......||++|+++++ .+.++..... ....|
T Consensus 176 ~~~~~l~~~d~dg~--~~~~lt~~--~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~-~~~l~~~~~~~~~~~~ 250 (429)
T PRK03629 176 QFPYELRVSDYDGY--NQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAF 250 (429)
T ss_pred CcceeEEEEcCCCC--CCEEeecC--CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC-eEEccCCCCCcCCeEE
Confidence 45778999998543 23445443 3456789999999999998766567889999999986 7776643322 23459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
||||++|+|....++ ..+||++|+++ +..+ .++.... ....+.|++| .+++....++..+++.++++ ++..
T Consensus 251 SPDG~~La~~~~~~g--~~~I~~~d~~t-g~~~-~lt~~~~-~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~--~g~~ 323 (429)
T PRK03629 251 SPDGSKLAFALSKTG--SLNLYVMDLAS-GQIR-QVTDGRS-NNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN--GGAP 323 (429)
T ss_pred CCCCCEEEEEEcCCC--CcEEEEEECCC-CCEE-EccCCCC-CcCceEECCCCCEEEEEeCCCCCceEEEEECC--CCCe
Confidence 999999999876533 34799999986 4444 4454432 3457788876 57777776677788888775 3333
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++ +.... ....+.+++|++.+++.... .....++.+++.+++
T Consensus 324 ~~l------t~~~~--~~~~~~~SpDG~~Ia~~~~~-~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 324 QRI------TWEGS--QNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATGG 366 (429)
T ss_pred EEe------ecCCC--CccCEEECCCCCEEEEEEcc-CCCceEEEEECCCCC
Confidence 222 21111 11234578899988876543 334579999998876
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-12 Score=120.05 Aligned_cols=194 Identities=14% Similarity=0.117 Sum_probs=115.2
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|. ..|.|+.+|+||.|.... + ....++++.+ .+.+. ..+
T Consensus 13 ~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~-~--------~~~~~~~~~~---~l~~~---~~~ 74 (256)
T PRK10349 13 NVHLVLLHGWGLNAE--VWRCIDEELS-SHFTLHLVDLPGFGRSRG-F--------GALSLADMAE---AVLQQ---APD 74 (256)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHh-cCCEEEEecCCCCCCCCC-C--------CCCCHHHHHH---HHHhc---CCC
Confidence 357999999765433 3555556665 459999999999986532 0 1123344433 33333 247
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------------cc---CCCCCCCccccc---ccCCCC-
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------ML---DPTIPLTTAEWE---EWGDPW- 402 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------------~~---~~~~~~~~~~~~---~~g~~~- 402 (505)
++.++|||+||++++.++.++|++++.+|...+....... +. ..........+. .++.+.
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA 154 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH
Confidence 8999999999999999999999999999876553111000 00 000000000000 001110
Q ss_pred CHH---------------------HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 403 KEE---------------------FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 403 ~~~---------------------~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
..+ ....+...+....+.++++| +|+++|++|..+|.+.+..+.+.+. ..++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~ 229 (256)
T PRK10349 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMP-FLRLYGYLDGLVPRKVVPMLDKLWP----HSESYI 229 (256)
T ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCC-eEEEecCCCccCCHHHHHHHHHhCC----CCeEEE
Confidence 000 00111222333456677898 9999999999998877665555443 457788
Q ss_pred EEecCCCCCCCCCChHHHHHH
Q 010654 462 FKCELGAGHFSKSGRFERLRE 482 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~~~~~~~ 482 (505)
++ ++||....+.++.+..
T Consensus 230 i~---~~gH~~~~e~p~~f~~ 247 (256)
T PRK10349 230 FA---KAAHAPFISHPAEFCH 247 (256)
T ss_pred eC---CCCCCccccCHHHHHH
Confidence 88 8899877666665443
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.3e-11 Score=119.79 Aligned_cols=185 Identities=8% Similarity=0.086 Sum_probs=125.1
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcE-EEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEe
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKF-LFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAA 83 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~-i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~ 83 (505)
+..+||+.|.... ..+.+... . ....+.|||||++ +++++......+||++|+.+++ .++|+...... ...|
T Consensus 167 ~~~~l~~~d~dg~--~~~~~~~~--~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~-~~~lt~~~g~~~~~~~ 240 (419)
T PRK04043 167 KKSNIVLADYTLT--YQKVIVKG--G-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK-KEKIASSQGMLVVSDV 240 (419)
T ss_pred CcceEEEECCCCC--ceeEEccC--C-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc-EEEEecCCCcEEeeEE
Confidence 4678999887322 23334432 2 5668999999997 6655655456799999999997 88887543222 2459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
||||++++|....++ +.+||++++++ +..+ .++...... ....|++| .++|+....+..++++++++ ++..
T Consensus 241 SPDG~~la~~~~~~g--~~~Iy~~dl~~-g~~~-~LT~~~~~d-~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~--~g~~ 313 (419)
T PRK04043 241 SKDGSKLLLTMAPKG--QPDIYLYDTNT-KTLT-QITNYPGID-VNGNFVEDDKRIVFVSDRLGYPNIFMKKLN--SGSV 313 (419)
T ss_pred CCCCCEEEEEEccCC--CcEEEEEECCC-CcEE-EcccCCCcc-CccEECCCCCEEEEEECCCCCceEEEEECC--CCCe
Confidence 999999999987633 57999999986 4444 455443321 23456664 78888888888889998886 3333
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCC-----CCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR-----TPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~ 213 (505)
++++ +. ..+ ...++|||+.++|+..... ....|+++++.+++
T Consensus 314 ~rlt------~~-g~~---~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~ 360 (419)
T PRK04043 314 EQVV------FH-GKN---NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY 360 (419)
T ss_pred EeCc------cC-CCc---CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence 3222 11 111 1367899999998876542 23589999998887
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.4e-12 Score=119.69 Aligned_cols=200 Identities=20% Similarity=0.268 Sum_probs=123.7
Q ss_pred HHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhh-
Q 010654 285 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNM- 362 (505)
Q Consensus 285 ~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~- 362 (505)
...|+++||+|+++||.|-|. .|.. .......+-|.+.|++.+... +.-...+++++|+|.||..+++++..
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~---~y~~---~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGT---PYLN---GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCC---cccC---cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 467889999999999998765 3321 111124556666666655542 43334799999999999999888754
Q ss_pred ---CCCc---eeEEEecCCchhhhhhccCCCC-CCC----------cccccc----------------------------
Q 010654 363 ---RPDL---FKAAVAAVPFVDVLTTMLDPTI-PLT----------TAEWEE---------------------------- 397 (505)
Q Consensus 363 ---~p~~---~~a~v~~~~~~d~~~~~~~~~~-~~~----------~~~~~~---------------------------- 397 (505)
.||+ +.++++..|..|+...+..-.- +.. ...|.+
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 3555 7888888888776544321000 000 000000
Q ss_pred --------c--C-----CC-----CCHHHHHHHHhCCh-hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC-C
Q 010654 398 --------W--G-----DP-----WKEEFYFYMKSYSP-VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK-T 455 (505)
Q Consensus 398 --------~--g-----~~-----~~~~~~~~~~~~sp-~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~-~ 455 (505)
+ + .+ .++.....+.+.+. ...-...+.| |+|.||..|..||+..+.++++++.++| .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVP-VLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCC-EEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 0 0 00 01111122222221 0001112566 9999999999999999999999999999 7
Q ss_pred CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 456 DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
++++..++ +.+|.... .......++||...|...+.
T Consensus 252 ~V~~~~~~---~~~H~~~~-----~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 252 DVEYVRYP---GGGHLGAA-----FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CEEEEecC---CCChhhhh-----hcCcHHHHHHHHHHHCCCCC
Confidence 99888887 77895321 12233568999999966543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.5e-12 Score=124.28 Aligned_cols=224 Identities=17% Similarity=0.164 Sum_probs=130.5
Q ss_pred CcEEEEEcCCCCcCCCCC-----------CchhH---HHHHHCCcEEEEEcccCC-CCC-chhHHHc--ccc---cCCcc
Q 010654 263 DPLLLYGYGSYEICNDPA-----------FNSSR---LSLLDRGFIFAIAQIRGG-GEL-GRQWYEN--GKF---LKKKN 321 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~-----------~~~~~---~~l~~~G~~v~~~d~rG~-~~~-g~~~~~~--~~~---~~~~~ 321 (505)
.|.||++||.+++..... |.... ..+...+|.|+.+|++|+ ++. +...... +.. .....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 589999999877654211 22211 134367999999999984 222 2110000 000 01134
Q ss_pred hHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-----------hhcc-CCC-
Q 010654 322 TFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----------TTML-DPT- 387 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-----------~~~~-~~~- 387 (505)
.++|+.+.+..+++.-.+ ++ +.++|+|+||.+++.++.++|++++.+|..++..... .... ...
T Consensus 128 ~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 567777766666655323 56 4799999999999999999999999988876532110 0000 000
Q ss_pred ----------CCC--------------C-cccc-cccCC----C---------CCHHHH------HHHHhCCh-------
Q 010654 388 ----------IPL--------------T-TAEW-EEWGD----P---------WKEEFY------FYMKSYSP------- 415 (505)
Q Consensus 388 ----------~~~--------------~-~~~~-~~~g~----~---------~~~~~~------~~~~~~sp------- 415 (505)
.+. . ...+ ..+.. + ...+.+ .+....++
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 000 0 0000 00000 0 000000 00111111
Q ss_pred ----------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH
Q 010654 416 ----------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479 (505)
Q Consensus 416 ----------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 479 (505)
...+.+|++| +|+++|++|..+|+..++++.+.+...+..+++++++. ++||......++.
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~P-tLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~--~~GH~~~le~p~~ 362 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKAR-FLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDS--PYGHDAFLLDDPR 362 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCC-EEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCC--CCCchhHhcCHHH
Confidence 1334677898 99999999999999999999999988777667776742 6899765555554
Q ss_pred HHHHHHHHHHHHHh
Q 010654 480 LREAAFTYTFLMRA 493 (505)
Q Consensus 480 ~~~~~~~~~fl~~~ 493 (505)
+.. .+.+||.+.
T Consensus 363 ~~~--~L~~FL~~~ 374 (379)
T PRK00175 363 YGR--LVRAFLERA 374 (379)
T ss_pred HHH--HHHHHHHhh
Confidence 433 578888774
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-11 Score=121.74 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=126.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||+|++.+++ .+.+... +.....+.|||||+.|++..+.....+||++|++++. .++|+..... ....|||
T Consensus 225 ~~~i~~~dl~~g~--~~~l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~Lt~~~~~~~~~~~sp 299 (435)
T PRK05137 225 RPRVYLLDLETGQ--RELVGNF--PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-TTRLTDSPAIDTSPSYSP 299 (435)
T ss_pred CCEEEEEECCCCc--EEEeecC--CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-eEEccCCCCccCceeEcC
Confidence 4689999997753 3444332 2234578999999999998776667899999999986 8888865422 2245999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++..+ ..+||++++++ +..+ .++.... ....+.|++| .+++.....+..++++++++ ++..+.
T Consensus 300 DG~~i~f~s~~~g--~~~Iy~~d~~g-~~~~-~lt~~~~-~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~--~~~~~~ 372 (435)
T PRK05137 300 DGSQIVFESDRSG--SPQLYVMNADG-SNPR-RISFGGG-RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD--GSGERI 372 (435)
T ss_pred CCCEEEEEECCCC--CCeEEEEECCC-CCeE-EeecCCC-cccCeEECCCCCEEEEEEcCCCceEEEEEECC--CCceEe
Confidence 9999999987643 35899999876 4444 3443222 2345667765 56666655566678888875 332222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCC--ceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTP--PSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~ 213 (505)
++. . .....+++++|++.++|........ ..||++++.++.
T Consensus 373 lt~--------~-~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~ 415 (435)
T PRK05137 373 LTS--------G-FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN 415 (435)
T ss_pred ccC--------C-CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence 221 1 1233467889999999888766553 589999987665
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.7e-12 Score=122.07 Aligned_cols=100 Identities=13% Similarity=0.051 Sum_probs=67.5
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++. ..|......|+ ++|.|+.+|+||.|.+...... .......+|+.+.++.+. .+
T Consensus 86 g~~vvliHG~~~~~--~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~----~~~~~~a~~l~~~i~~~~------~~ 152 (354)
T PLN02578 86 GLPIVLIHGFGASA--FHWRYNIPELA-KKYKVYALDLLGFGWSDKALIE----YDAMVWRDQVADFVKEVV------KE 152 (354)
T ss_pred CCeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCcccc----cCHHHHHHHHHHHHHHhc------cC
Confidence 35689999976543 22444445554 5799999999999876543210 000111234444444432 36
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
++.++|||+||++++.++.++|++++++|..++
T Consensus 153 ~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 153 PAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 799999999999999999999999999987654
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.3e-12 Score=115.59 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=68.3
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.+++.. .|......| .+|.|+.+|+||.|.....- ...+++..+.+..+++.. +.++
T Consensus 3 p~vvllHG~~~~~~--~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~l~~~l~~~--~~~~ 67 (242)
T PRK11126 3 PWLVFLHGLLGSGQ--DWQPVGEAL--PDYPRLYIDLPGHGGSAAIS---------VDGFADVSRLLSQTLQSY--NILP 67 (242)
T ss_pred CEEEEECCCCCChH--HHHHHHHHc--CCCCEEEecCCCCCCCCCcc---------ccCHHHHHHHHHHHHHHc--CCCC
Confidence 77999999876543 455555555 47999999999998764310 113444444444444332 2368
Q ss_pred EEEEeeChHHHHHHHHHhhCCC-ceeEEEecCCc
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPF 376 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~ 376 (505)
+.++|||+||.+++.++.++|+ ++++++..++.
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999999999998865 48888876543
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=116.91 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=74.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
++.|.||++||..+.. ..|......|.++||.|+.+|+||+|..... ......+++..+.+..+++.-. .
T Consensus 16 ~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-------~~~~~~~~~~~~~l~~~i~~l~-~ 85 (273)
T PLN02211 16 RQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-------ADSVTTFDEYNKPLIDFLSSLP-E 85 (273)
T ss_pred CCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-------cccCCCHHHHHHHHHHHHHhcC-C
Confidence 4568999999976543 3466666778888999999999998753211 1111344554444444333311 1
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.+++.++||||||.++..++.++|++++++|..++.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 368999999999999999998899999998887553
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.3e-12 Score=116.11 Aligned_cols=168 Identities=21% Similarity=0.197 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh---ccCC--CCCCCcc---c
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---MLDP--TIPLTTA---E 394 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~---~~~~--~~~~~~~---~ 394 (505)
++-+..|++||.+++.+++++|+|+|.|.||-+++.+++..| .++|+|+.+|-.-.... .... .+|.... .
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 456789999999999999999999999999999999999988 78999988774321110 0000 0110000 0
Q ss_pred c--cccCCCCCHHHHHHHH---hCChhhcccCCCCCeEEEEccCCCCCCCCCh-HHHHHHHHHhcCCC--CCeEEEEecC
Q 010654 395 W--EEWGDPWKEEFYFYMK---SYSPVDNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLREMKTD--DNILLFKCEL 466 (505)
Q Consensus 395 ~--~~~g~~~~~~~~~~~~---~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~-~~~~~~~L~~~~~~--~~~~~~~~~~ 466 (505)
. ...+.......+.... .....-.+.++++| +|+++|++|...|... +.++.++|++++.+ ++.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~p-iLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~--- 157 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGP-ILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYP--- 157 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SE-EEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEET---
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCC-EEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcC---
Confidence 0 0000000000000000 00111125566887 9999999999998666 44677789988876 6777788
Q ss_pred CCCCCCCCC-----h---------------------HHHHHHHHHHHHHHHHhhC
Q 010654 467 GAGHFSKSG-----R---------------------FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 467 ~~gH~~~~~-----~---------------------~~~~~~~~~~~~fl~~~l~ 495 (505)
++||.+..+ . ..+.+.+..+++||.++|+
T Consensus 158 ~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 158 GAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp TB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 889964211 0 0234556678999999986
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.1e-11 Score=119.95 Aligned_cols=188 Identities=15% Similarity=0.132 Sum_probs=123.2
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEE--eCCCCC--ceeeeeccccce--e
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL--DVSKPE--ELRVLTPRVVGV--D 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~--d~~~~~--~~~~l~~~~~~~--~ 80 (505)
..+||++++.+++ .+.|...+. ....++|||||++|+|........++|+. +++++. +.+.++....+. .
T Consensus 210 ~~~I~~~~l~~g~--~~~lt~~~g--~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~ 285 (428)
T PRK01029 210 VPKIFLGSLENPA--GKKILALQG--NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGN 285 (428)
T ss_pred CceEEEEECCCCC--ceEeecCCC--CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCC
Confidence 3579999998753 445544322 34468999999999998866556678775 555421 367777543222 3
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC-CCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNT-SETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
..|||||++|+|.++.++ ..+||++++.+. +..+ .++.... ....+.|++| .++++...++..+++++++.+
T Consensus 286 p~wSPDG~~Laf~s~~~g--~~~ly~~~~~~~g~~~~-~lt~~~~-~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~- 360 (428)
T PRK01029 286 PSFSPDGTRLVFVSNKDG--RPRIYIMQIDPEGQSPR-LLTKKYR-NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT- 360 (428)
T ss_pred eEECCCCCEEEEEECCCC--CceEEEEECcccccceE-EeccCCC-CccceeECCCCCEEEEEEcCCCCcEEEEEECCC-
Confidence 459999999999987643 358999988532 2233 4554432 2446778776 577777667777899998863
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+..++|+.. ......+.+++|++.++|..... ....+|++++.+++
T Consensus 361 -g~~~~Lt~~--------~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl~~g~ 406 (428)
T PRK01029 361 -GRDYQLTTS--------PENKESPSWAIDSLHLVYSAGNS-NESELYLISLITKK 406 (428)
T ss_pred -CCeEEccCC--------CCCccceEECCCCCEEEEEECCC-CCceEEEEECCCCC
Confidence 334444321 11123356789999888876643 34689999988776
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=119.55 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=106.4
Q ss_pred HHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCC
Q 010654 287 SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 287 ~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~ 365 (505)
.|...+|.|+.+|+||+|+... . ...+.|..+.+..+++.-.+ ++ +.++|+||||++++.++.++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~-------~---~~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~ 161 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLD-------V---PIDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPA 161 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCC-------C---CCCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChH
Confidence 3545689999999999765311 0 11233444333333333222 34 4799999999999999999999
Q ss_pred ceeEEEecCCchh-------hhh---hc--cCCC--CC--------------C-Ccccc-cccCCC-C------CHHHH-
Q 010654 366 LFKAAVAAVPFVD-------VLT---TM--LDPT--IP--------------L-TTAEW-EEWGDP-W------KEEFY- 407 (505)
Q Consensus 366 ~~~a~v~~~~~~d-------~~~---~~--~~~~--~~--------------~-~~~~~-~~~g~~-~------~~~~~- 407 (505)
+++.+|..++... +.. .. .... .. . ....+ ..+... . .....
T Consensus 162 ~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T PRK08775 162 RVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAED 241 (343)
T ss_pred hhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHH
Confidence 9999998865421 100 00 0000 00 0 00000 001100 0 00000
Q ss_pred -------HHHHhCCh-------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 408 -------FYMKSYSP-------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 408 -------~~~~~~sp-------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
......++ ...+.++++| +|+++|+.|..+|+.++.++++.+.. ..++++++. +
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~P-tLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~--~ 315 (343)
T PRK08775 242 YLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVP-TVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRS--P 315 (343)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCC-eEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeC--C
Confidence 01111111 0124577888 99999999999999888888776632 356778871 3
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+||....+.++.+.. .+.+||.+.
T Consensus 316 aGH~~~lE~Pe~~~~--~l~~FL~~~ 339 (343)
T PRK08775 316 YGHDAFLKETDRIDA--ILTTALRST 339 (343)
T ss_pred ccHHHHhcCHHHHHH--HHHHHHHhc
Confidence 799776556665544 467888653
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-10 Score=117.49 Aligned_cols=187 Identities=11% Similarity=0.040 Sum_probs=125.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+..+||++|..+. ..+.+... ......++|||||++|+|.+.......||++|++++. .++++...... ...||
T Consensus 180 ~~~~l~~~d~dg~--~~~~lt~~--~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~-~~~l~~~~g~~~~~~~S 254 (435)
T PRK05137 180 RIKRLAIMDQDGA--NVRYLTDG--SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ-RELVGNFPGMTFAPRFS 254 (435)
T ss_pred cceEEEEECCCCC--CcEEEecC--CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc-EEEeecCCCcccCcEEC
Confidence 4678999998443 33445432 3356689999999999998766667899999999986 77776544222 23599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ +.+||++|+++ +..+ .++.... ......|++| .++|....++..++++++++ ++..+
T Consensus 255 PDG~~la~~~~~~g--~~~Iy~~d~~~-~~~~-~Lt~~~~-~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~--g~~~~ 327 (435)
T PRK05137 255 PDGRKVVMSLSQGG--NTDIYTMDLRS-GTTT-RLTDSPA-IDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD--GSNPR 327 (435)
T ss_pred CCCCEEEEEEecCC--CceEEEEECCC-CceE-EccCCCC-ccCceeEcCCCCEEEEEECCCCCCeEEEEECC--CCCeE
Confidence 99999999876543 46899999986 4444 4554433 2335677765 57777777777889888875 44333
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+|+ .... ....+.+++|++.+++...... -..++++++.++.
T Consensus 328 ~lt------~~~~--~~~~~~~SpdG~~ia~~~~~~~-~~~i~~~d~~~~~ 369 (435)
T PRK05137 328 RIS------FGGG--RYSTPVWSPRGDLIAFTKQGGG-QFSIGVMKPDGSG 369 (435)
T ss_pred Eee------cCCC--cccCeEECCCCCEEEEEEcCCC-ceEEEEEECCCCc
Confidence 332 1111 1223467899999888764322 2478888876554
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.7e-10 Score=114.95 Aligned_cols=187 Identities=14% Similarity=0.080 Sum_probs=124.6
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s 84 (505)
+.++||+.|.... ..+.++.. ......+.|||||++|+|.+......+||++|+++++ .++++..... ....||
T Consensus 196 ~~~~l~i~d~dG~--~~~~l~~~--~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~-~~~lt~~~g~~~~~~wS 270 (448)
T PRK04792 196 YPYQLMIADYDGY--NEQMLLRS--PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV-REKVTSFPGINGAPRFS 270 (448)
T ss_pred CceEEEEEeCCCC--CceEeecC--CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC-eEEecCCCCCcCCeeEC
Confidence 4578999987432 23455543 3345578999999999998776667899999999986 6777643322 234599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ +.+||++|+++ +..+ .++.... ....+.|++| .+++....++..+++++++. ++..+
T Consensus 271 PDG~~La~~~~~~g--~~~Iy~~dl~t-g~~~-~lt~~~~-~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~--~g~~~ 343 (448)
T PRK04792 271 PDGKKLALVLSKDG--QPEIYVVDIAT-KALT-RITRHRA-IDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA--SGKVS 343 (448)
T ss_pred CCCCEEEEEEeCCC--CeEEEEEECCC-CCeE-ECccCCC-CccceEECCCCCEEEEEECCCCCceEEEEECC--CCCEE
Confidence 99999999876543 36899999986 4433 4444332 2345677765 67777777777788888875 33333
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.| ++.. .+. ....+++|++.++|.... .....|+++++.+++
T Consensus 344 ~L------t~~g-~~~-~~~~~SpDG~~l~~~~~~-~g~~~I~~~dl~~g~ 385 (448)
T PRK04792 344 RL------TFEG-EQN-LGGSITPDGRSMIMVNRT-NGKFNIARQDLETGA 385 (448)
T ss_pred EE------ecCC-CCC-cCeeECCCCCEEEEEEec-CCceEEEEEECCCCC
Confidence 22 2211 111 224678899988886543 233478999998876
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.7e-11 Score=101.71 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=136.7
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
....+.++...+.++-+.+. ..+...++|++||.-...........+..+.+.||.++..|++|.|++...|.
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh-------~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~ 81 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLH-------ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY 81 (269)
T ss_pred eeeEEEeccCCCchhhccee-------ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc
Confidence 33445555555555544221 12456899999986433222112223457778899999999999998877664
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCC
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLT 391 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 391 (505)
. -.+....+|+..+++++.....+ --.|.|||-||..++..+.++.+ ..-++..+|-+|....... .+.-.
T Consensus 82 ~----Gn~~~eadDL~sV~q~~s~~nr~---v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~e-Rlg~~ 152 (269)
T KOG4667|consen 82 Y----GNYNTEADDLHSVIQYFSNSNRV---VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINE-RLGED 152 (269)
T ss_pred c----CcccchHHHHHHHHHHhccCceE---EEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhh-hhccc
Confidence 2 23335569999999999874321 23589999999999999999876 6777888887776544311 11000
Q ss_pred cccc-c-----c-------cCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 392 TAEW-E-----E-------WGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 392 ~~~~-~-----~-------~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
-.+| . . |+.-..++....-...+-.....+| +|| ||-+||..|.+||.+.+.+|++.+..
T Consensus 153 ~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~-VLTvhGs~D~IVPve~AkefAk~i~n---- 227 (269)
T KOG4667|consen 153 YLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCR-VLTVHGSEDEIVPVEDAKEFAKIIPN---- 227 (269)
T ss_pred HHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCc-eEEEeccCCceeechhHHHHHHhccC----
Confidence 0011 1 1 1111112211100111111112223 787 99999999999999999999988875
Q ss_pred CCeEEEEecCCCCCCCCCC
Q 010654 457 DNILLFKCELGAGHFSKSG 475 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~ 475 (505)
..+.+.+ |+.|.+...
T Consensus 228 H~L~iIE---gADHnyt~~ 243 (269)
T KOG4667|consen 228 HKLEIIE---GADHNYTGH 243 (269)
T ss_pred CceEEec---CCCcCccch
Confidence 4677787 899987543
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.9e-10 Score=112.73 Aligned_cols=187 Identities=15% Similarity=0.112 Sum_probs=121.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+..+||++|... ...+.+... ......++|||||++|+|.+.......||++|+++++ .++++...... ...||
T Consensus 174 ~~~~L~~~D~dG--~~~~~l~~~--~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~-~~~l~~~~g~~~~~~~S 248 (427)
T PRK02889 174 NRYQLQISDADG--QNAQSALSS--PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR-RRVVANFKGSNSAPAWS 248 (427)
T ss_pred CccEEEEECCCC--CCceEeccC--CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC-EEEeecCCCCccceEEC
Confidence 356799999733 223444432 2234578999999999998766566789999999986 67776433222 24599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ ..+||.+++.+ +..+ .++.... ....+.|++| .+++.....+..+++.++++ ++..+
T Consensus 249 PDG~~la~~~~~~g--~~~Iy~~d~~~-~~~~-~lt~~~~-~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~--~g~~~ 321 (427)
T PRK02889 249 PDGRTLAVALSRDG--NSQIYTVNADG-SGLR-RLTQSSG-IDTEPFFSPDGRSIYFTSDRGGAPQIYRMPAS--GGAAQ 321 (427)
T ss_pred CCCCEEEEEEccCC--CceEEEEECCC-CCcE-ECCCCCC-CCcCeEEcCCCCEEEEEecCCCCcEEEEEECC--CCceE
Confidence 99999999876543 36999999876 4333 4554332 2335677776 57777666677777777765 33222
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+ +.+.. .+. ..+.+++||+.+++..... ...+++++++.+++
T Consensus 322 ~------lt~~g-~~~-~~~~~SpDG~~Ia~~s~~~-g~~~I~v~d~~~g~ 363 (427)
T PRK02889 322 R------VTFTG-SYN-TSPRISPDGKLLAYISRVG-GAFKLYVQDLATGQ 363 (427)
T ss_pred E------EecCC-CCc-CceEECCCCCEEEEEEccC-CcEEEEEEECCCCC
Confidence 2 22221 111 2246789999888765432 23479999988776
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-10 Score=114.01 Aligned_cols=183 Identities=14% Similarity=0.104 Sum_probs=121.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.++. .+.+... +.....+.|||||+.|++..+.....+||.+|++++. .++++..... ....|||
T Consensus 219 ~~~I~~~dl~~g~--~~~l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSp 293 (427)
T PRK02889 219 KPVVYVHDLATGR--RRVVANF--KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSP 293 (427)
T ss_pred CcEEEEEECCCCC--EEEeecC--CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcC
Confidence 3569999998753 3444322 2344578999999999998776677899999999886 7888764322 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||.+++++ +..+ .++.... ......|++| .+++....++..++++++++. +..+.
T Consensus 294 DG~~l~f~s~~~g--~~~Iy~~~~~~-g~~~-~lt~~g~-~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~--g~~~~ 366 (427)
T PRK02889 294 DGRSIYFTSDRGG--APQIYRMPASG-GAAQ-RVTFTGS-YNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT--GQVTA 366 (427)
T ss_pred CCCEEEEEecCCC--CcEEEEEECCC-CceE-EEecCCC-CcCceEECCCCCEEEEEEccCCcEEEEEEECCC--CCeEE
Confidence 9999999987643 35899999876 4333 2332222 1234567665 567666666667889998764 22333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
|+.+ .. ...+.+++|++.++|....... ..++.++..+
T Consensus 367 lt~~--------~~-~~~p~~spdg~~l~~~~~~~g~-~~l~~~~~~g 404 (427)
T PRK02889 367 LTDT--------TR-DESPSFAPNGRYILYATQQGGR-SVLAAVSSDG 404 (427)
T ss_pred ccCC--------CC-ccCceECCCCCEEEEEEecCCC-EEEEEEECCC
Confidence 3211 11 1235788999998888775543 5688888754
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.3e-10 Score=113.74 Aligned_cols=187 Identities=13% Similarity=0.046 Sum_probs=124.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+.++||+.|.... ..+.++.. ......+.|||||++|+|.+......+||++|++++. .+.++...... ...||
T Consensus 177 ~~~~l~~~d~~g~--~~~~l~~~--~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~-~~~l~~~~g~~~~~~~S 251 (430)
T PRK00178 177 TRYTLQRSDYDGA--RAVTLLQS--REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR-REQITNFEGLNGAPAWS 251 (430)
T ss_pred cceEEEEECCCCC--CceEEecC--CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC-EEEccCCCCCcCCeEEC
Confidence 3557888888543 33445543 2345688999999999998766567799999999986 77776433222 24599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ ..+||++|+++ +..+ .++.... ....+.|++| .+++....++..+++++++.. +..+
T Consensus 252 pDG~~la~~~~~~g--~~~Iy~~d~~~-~~~~-~lt~~~~-~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~--g~~~ 324 (430)
T PRK00178 252 PDGSKLAFVLSKDG--NPEIYVMDLAS-RQLS-RVTNHPA-IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG--GRAE 324 (430)
T ss_pred CCCCEEEEEEccCC--CceEEEEECCC-CCeE-EcccCCC-CcCCeEECCCCCEEEEEECCCCCceEEEEECCC--CCEE
Confidence 99999999876543 36899999986 4433 4554332 2335677765 678877777778888888753 3233
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++ .+.. .+ ...+.++++++.++|..... ....|+++++.+++
T Consensus 325 ~l------t~~~-~~-~~~~~~Spdg~~i~~~~~~~-~~~~l~~~dl~tg~ 366 (430)
T PRK00178 325 RV------TFVG-NY-NARPRLSADGKTLVMVHRQD-GNFHVAAQDLQRGS 366 (430)
T ss_pred Ee------ecCC-CC-ccceEECCCCCEEEEEEccC-CceEEEEEECCCCC
Confidence 22 2111 11 11245688999888876543 24469999998876
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.4e-11 Score=117.98 Aligned_cols=225 Identities=17% Similarity=0.109 Sum_probs=129.3
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
+.+|.++... ..+ .+..|.||++||.+.... .|......|+ .+|.|+.+|+||.|....... ....
T Consensus 111 ~~~~~~~~y~---~~G----~~~~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~----~~~~ 176 (383)
T PLN03084 111 SSDLFRWFCV---ESG----SNNNPPVLLIHGFPSQAY--SYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQP----GYGF 176 (383)
T ss_pred cCCceEEEEE---ecC----CCCCCeEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEECCCCCCCCCCCcc----cccc
Confidence 4577666432 222 123588999999875433 3555555665 589999999999986543210 0011
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-----hh---c----cC--
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----TT---M----LD-- 385 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-----~~---~----~~-- 385 (505)
...++++...+..++++-. .+++.++|+|+||.+++.++.++|++++.+|..++..... .. + ..
T Consensus 177 ~ys~~~~a~~l~~~i~~l~--~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~ 254 (383)
T PLN03084 177 NYTLDEYVSSLESLIDELK--SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEI 254 (383)
T ss_pred cCCHHHHHHHHHHHHHHhC--CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhh
Confidence 2345555555555444422 3579999999999999999999999999999887653210 00 0 00
Q ss_pred -CCCCC---------------CcccccccCC----CC-CHHH----HHHHHhC-Ch----hh---cccCCCCCeEEEEcc
Q 010654 386 -PTIPL---------------TTAEWEEWGD----PW-KEEF----YFYMKSY-SP----VD---NVKAQNYPHILVTAG 432 (505)
Q Consensus 386 -~~~~~---------------~~~~~~~~g~----~~-~~~~----~~~~~~~-sp----~~---~~~~~~~Pp~Li~~G 432 (505)
...+. .......+.. +. .... +..+... .. +. ...+++.| +|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vP-vLiI~G 333 (383)
T PLN03084 255 FSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTP-ITVCWG 333 (383)
T ss_pred hhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCC-EEEEee
Confidence 00000 0000000101 10 0000 1111110 00 01 01346887 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+.|..++...++++++.. +.++++++ ++||....+.++.+.. .+.+|+.
T Consensus 334 ~~D~~v~~~~~~~~a~~~-----~a~l~vIp---~aGH~~~~E~Pe~v~~--~I~~Fl~ 382 (383)
T PLN03084 334 LRDRWLNYDGVEDFCKSS-----QHKLIELP---MAGHHVQEDCGEELGG--IISGILS 382 (383)
T ss_pred CCCCCcCHHHHHHHHHhc-----CCeEEEEC---CCCCCcchhCHHHHHH--HHHHHhh
Confidence 999999987777666542 45677888 8899887766665444 4666764
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.2e-11 Score=102.54 Aligned_cols=164 Identities=18% Similarity=0.240 Sum_probs=116.1
Q ss_pred HHHHHHCCcEEEEEcc-cC---CCCCc----hhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHH
Q 010654 285 RLSLLDRGFIFAIAQI-RG---GGELG----RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLI 356 (505)
Q Consensus 285 ~~~l~~~G~~v~~~d~-rG---~~~~g----~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~ 356 (505)
...++..||.|++||+ || +.+.. ..|. .+...+....|+.+.++||..++ +..+||++|+.+||-.+
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~---~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~v 134 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWM---KGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVV 134 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHH---hcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEE
Confidence 3467778999999997 45 22211 1233 23444567899999999999776 45899999999999988
Q ss_pred HHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCC
Q 010654 357 GAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 357 ~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
..+....| .|.++++..|..- +.+ .+.++++| +|++.|+.|.
T Consensus 135 v~~~~~~~-~f~a~v~~hps~~------------------------d~~------------D~~~vk~P-ilfl~ae~D~ 176 (242)
T KOG3043|consen 135 VTLSAKDP-EFDAGVSFHPSFV------------------------DSA------------DIANVKAP-ILFLFAELDE 176 (242)
T ss_pred EEeeccch-hheeeeEecCCcC------------------------Chh------------HHhcCCCC-EEEEeecccc
Confidence 88877666 7888887766210 111 12344576 9999999999
Q ss_pred CCCCChHHHHHHHHHhcCC-CCCeEEEEecCCCCCCCCC---------ChHHHHHHHHHHHHHHHHhh
Q 010654 437 RVMYSEPAKFVAKLREMKT-DDNILLFKCELGAGHFSKS---------GRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~gH~~~~---------~~~~~~~~~~~~~~fl~~~l 494 (505)
.+|+....++-++|+.... ..++.+|+ +.+|++.. ++...-+.+.++..||.+++
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~~~v~~f~---g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVGSQVKTFS---GVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccceeEEEcC---CccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987653 24577888 78997631 11222333666789999886
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.8e-10 Score=114.38 Aligned_cols=184 Identities=11% Similarity=0.070 Sum_probs=121.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~d 86 (505)
.+||++++.+++ .+.+... +.....+.|||||++|++........+||++|++++. .++++..... ....||||
T Consensus 223 ~~i~i~dl~~G~--~~~l~~~--~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~-~~~lt~~~~~~~~~~wSPD 297 (429)
T PRK03629 223 SALVIQTLANGA--VRQVASF--PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPD 297 (429)
T ss_pred cEEEEEECCCCC--eEEccCC--CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEccCCCCCcCceEECCC
Confidence 579999997653 3444432 2234468999999999998766556789999999986 8888765422 23459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
|++|+|.+++++ ..+||.+++++ +..+ .++.... ....+.|++| .+++....++...+++++++. +..+.|
T Consensus 298 G~~I~f~s~~~g--~~~Iy~~d~~~-g~~~-~lt~~~~-~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~--g~~~~L 370 (429)
T PRK03629 298 SQNLAYTSDQAG--RPQVYKVNING-GAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQVL 370 (429)
T ss_pred CCEEEEEeCCCC--CceEEEEECCC-CCeE-EeecCCC-CccCEEECCCCCEEEEEEccCCCceEEEEECCC--CCeEEe
Confidence 999999997643 35999999986 4444 3333222 2345667765 566666666767788888763 333333
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+. . .....+++++||+.+++....- ....++++++.++.
T Consensus 371 t~--------~-~~~~~p~~SpDG~~i~~~s~~~-~~~~l~~~~~~G~~ 409 (429)
T PRK03629 371 TD--------T-FLDETPSIAPNGTMVIYSSSQG-MGSVLNLVSTDGRF 409 (429)
T ss_pred CC--------C-CCCCCceECCCCCEEEEEEcCC-CceEEEEEECCCCC
Confidence 31 1 1112356789999888776642 23467888875443
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.6e-10 Score=114.24 Aligned_cols=185 Identities=9% Similarity=0.100 Sum_probs=120.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.++. .+.+... ......+.|||||++|+|..+.....+||++|++++. .+.++..... ....|||
T Consensus 222 ~~~l~~~~l~~g~--~~~l~~~--~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~~sp 296 (430)
T PRK00178 222 RPRIFVQNLDTGR--REQITNF--EGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ-LSRVTNHPAIDTEPFWGK 296 (430)
T ss_pred CCEEEEEECCCCC--EEEccCC--CCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC-eEEcccCCCCcCCeEECC
Confidence 3579999997753 3444432 2234468999999999998776667899999999986 7888754422 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||.+++.+ +..+ .++.... ......|++| .+++....++..+++++++.+ +..+.
T Consensus 297 Dg~~i~f~s~~~g--~~~iy~~d~~~-g~~~-~lt~~~~-~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t--g~~~~ 369 (430)
T PRK00178 297 DGRTLYFTSDRGG--KPQIYKVNVNG-GRAE-RVTFVGN-YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR--GSVRI 369 (430)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCEE-EeecCCC-CccceEECCCCCEEEEEEccCCceEEEEEECCC--CCEEE
Confidence 9999999987643 35899999876 4443 2332211 1224456654 677776666666788888763 32333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
|+.. ... ..+.+++|++.++|....... ..++.++..++.
T Consensus 370 lt~~--------~~~-~~p~~spdg~~i~~~~~~~g~-~~l~~~~~~g~~ 409 (430)
T PRK00178 370 LTDT--------SLD-ESPSVAPNGTMLIYATRQQGR-GVLMLVSINGRV 409 (430)
T ss_pred ccCC--------CCC-CCceECCCCCEEEEEEecCCc-eEEEEEECCCCc
Confidence 3321 111 124678999988887664332 468888875443
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-10 Score=114.21 Aligned_cols=184 Identities=13% Similarity=0.082 Sum_probs=121.1
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEe
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAA 83 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~ 83 (505)
.++.++|++++.++.. ..+... +.....++|||||++|+|...+....+||++|++++. .+.|+....- ...+|
T Consensus 215 ~~~~~i~~~~l~~g~~--~~i~~~--~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~ 289 (425)
T COG0823 215 GGCPRIYYLDLNTGKR--PVILNF--NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSW 289 (425)
T ss_pred CCCceEEEEeccCCcc--ceeecc--CCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccC
Confidence 3447899999988754 333331 3345578999999999999988899999999999987 6667765422 23459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
||||++|+|.+++++.+ +||++++++ +..+ .++......- ...|++| .+++.....|...+.++++..++. .
T Consensus 290 spdG~~ivf~Sdr~G~p--~I~~~~~~g-~~~~-riT~~~~~~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~-~ 363 (425)
T COG0823 290 SPDGSKIVFTSDRGGRP--QIYLYDLEG-SQVT-RLTFSGGGNS-NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK-I 363 (425)
T ss_pred CCCCCEEEEEeCCCCCc--ceEEECCCC-Ccee-EeeccCCCCc-CccCCCCCCEEEEEeccCCceeeEEeccCCCCc-E
Confidence 99999999999986654 999999987 3334 3443332211 4445554 666666445656677777654222 3
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEEC
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 209 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 209 (505)
+.|+.. +.....+++++++.+.|..... .-+.++.++.
T Consensus 364 ~~lt~~---------~~~e~ps~~~ng~~i~~~s~~~-~~~~l~~~s~ 401 (425)
T COG0823 364 RILTST---------YLNESPSWAPNGRMIMFSSGQG-GGSVLSLVSL 401 (425)
T ss_pred EEcccc---------ccCCCCCcCCCCceEEEeccCC-CCceEEEeec
Confidence 333221 1122356778888887777766 3344555554
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.9e-10 Score=111.42 Aligned_cols=203 Identities=15% Similarity=0.100 Sum_probs=123.6
Q ss_pred EEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc----EEEEEcccCCCCCc
Q 010654 233 TERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF----IFAIAQIRGGGELG 307 (505)
Q Consensus 233 ~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~----~v~~~d~rG~~~~g 307 (505)
.+.+++.|. -|....++++.|+++ . .+++|+|+++||........ .......|.+.|. +|+.+|........
T Consensus 180 ~~~~~~~S~~Lg~~r~v~VY~P~~y-~-~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~ 256 (411)
T PRK10439 180 AKEIIWKSERLGNSRRVWIYTTGDA-A-PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRS 256 (411)
T ss_pred eEEEEEEccccCCceEEEEEECCCC-C-CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCccccc
Confidence 345555553 466778899999987 4 56899999999976543222 1223346666664 46777753221111
Q ss_pred hhHHHcccccCCcchHHH-HH-HHHHHHHHc--CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKFLKKKNTFTD-FI-ACAEYLIKN--CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D-~~-~~~~~l~~~--~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
.+. . ....+.+ +. +.+-++.++ -..|+++.+|+|.||||+.++.++.++|++|.++++.+|-+-+..
T Consensus 257 ~el------~-~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~-- 327 (411)
T PRK10439 257 QEL------P-CNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH-- 327 (411)
T ss_pred ccC------C-chHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC--
Confidence 110 0 0112222 21 233444444 235888999999999999999999999999999999998532110
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
.. +. ......+.+.+. .....+. .++|.+|..|... ...++++++.|+++|.++++..++
T Consensus 328 ---~~----------~~-~~~~l~~~l~~~----~~~~~~l-r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~ 387 (411)
T PRK10439 328 ---RG----------GQ-QEGVLLEQLKAG----EVSARGL-RIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVD 387 (411)
T ss_pred ---cc----------CC-chhHHHHHHHhc----ccCCCCc-eEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECC
Confidence 00 00 001111122210 0111122 4899999988544 467899999999999998777775
Q ss_pred ecCCCCCC
Q 010654 464 CELGAGHF 471 (505)
Q Consensus 464 ~~~~~gH~ 471 (505)
| ||.
T Consensus 388 ---G-GHd 391 (411)
T PRK10439 388 ---G-GHD 391 (411)
T ss_pred ---C-CcC
Confidence 4 784
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.4e-10 Score=112.84 Aligned_cols=184 Identities=8% Similarity=0.066 Sum_probs=119.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.+++ .+.+... +.....+.|||||++|++......+.+||++|+++++ .+.++..... ....|||
T Consensus 241 ~~~L~~~dl~tg~--~~~lt~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~-~~~lt~~~~~~~~p~wSp 315 (448)
T PRK04792 241 KAEIFVQDIYTQV--REKVTSF--PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA-LTRITRHRAIDTEPSWHP 315 (448)
T ss_pred CcEEEEEECCCCC--eEEecCC--CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC-eEECccCCCCccceEECC
Confidence 4679999997753 3444432 2233468999999999998766667899999999986 8888764322 2245999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||++++++ +..+ .++..... .....|++| .+++....++..+++++++.. +..+.
T Consensus 316 DG~~I~f~s~~~g--~~~Iy~~dl~~-g~~~-~Lt~~g~~-~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~--g~~~~ 388 (448)
T PRK04792 316 DGKSLIFTSERGG--KPQIYRVNLAS-GKVS-RLTFEGEQ-NLGGSITPDGRSMIMVNRTNGKFNIARQDLET--GAMQV 388 (448)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCEE-EEecCCCC-CcCeeECCCCCEEEEEEecCCceEEEEEECCC--CCeEE
Confidence 9999999987643 35999999986 4444 33322221 123456655 677766666666788888753 33333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
|+.. ... ..+++++|++.++|...... -..++.++..++
T Consensus 389 lt~~--------~~d-~~ps~spdG~~I~~~~~~~g-~~~l~~~~~~G~ 427 (448)
T PRK04792 389 LTST--------RLD-ESPSVAPNGTMVIYSTTYQG-KQVLAAVSIDGR 427 (448)
T ss_pred ccCC--------CCC-CCceECCCCCEEEEEEecCC-ceEEEEEECCCC
Confidence 3321 111 12467889998888776432 346888887543
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-12 Score=118.80 Aligned_cols=205 Identities=18% Similarity=0.263 Sum_probs=120.1
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCC----cEEEEEcccCCCCCchhHHHc-----
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGRQWYEN----- 313 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G----~~v~~~d~rG~~~~g~~~~~~----- 313 (505)
|..+..+++.|+++ ...+++|+|+++||................+.+.| .+++.++.-+.......|...
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 56788899999998 77889999999999511000000111122344443 455555554443222222210
Q ss_pred -ccccCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 314 -GKFLKKKNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 314 -~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
.....+...+.+.. +.+.++.++-.+++++.+|+|+|+||+.++.++.++|+.|.++++.+|..+....+
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~------- 156 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSL------- 156 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCH-------
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccc-------
Confidence 01112223344433 46667777766777779999999999999999999999999999999987653111
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcc-----cCCCCCeEEEEccCCCCCCCC----------ChHHHHHHHHHhcCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMY----------SEPAKFVAKLREMKT 455 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~-----~~~~~Pp~Li~~G~~D~~vp~----------~~~~~~~~~L~~~~~ 455 (505)
|.. .... .+ ...++...+ ..... ++++..|+.|..... ....++.+.|+..+.
T Consensus 157 ----w~~---~~~~-~~---~~~~~~~~~~~~~~~~~~~-~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 224 (251)
T PF00756_consen 157 ----WGP---SDDE-AW---KENDPFDLIKALSQKKKPL-RIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGI 224 (251)
T ss_dssp ----HHH---STCG-HH---GGCHHHHHHHHHHHTTSEE-EEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEEC
T ss_pred ----cCc---CCcH-Hh---hhccHHHHhhhhhcccCCC-eEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCC
Confidence 100 0000 00 111121111 11123 589999999984432 234445556667788
Q ss_pred CCCeEEEEecCCCCCC
Q 010654 456 DDNILLFKCELGAGHF 471 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~ 471 (505)
+..+..++ ++|.
T Consensus 225 ~~~~~~~~----G~H~ 236 (251)
T PF00756_consen 225 PHTYHVFP----GGHD 236 (251)
T ss_dssp TTESEEEH----SESS
T ss_pred CceEEEec----Cccc
Confidence 88888886 4784
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.5e-10 Score=112.71 Aligned_cols=185 Identities=10% Similarity=0.106 Sum_probs=122.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.++. .+.+... +.....++|||||++|++..+.....+||++|++++. .+.++..... ....|||
T Consensus 227 ~~~l~~~dl~~g~--~~~l~~~--~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~sp 301 (433)
T PRK04922 227 RSAIYVQDLATGQ--RELVASF--RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ-LTRLTNHFGIDTEPTWAP 301 (433)
T ss_pred CcEEEEEECCCCC--EEEeccC--CCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC-eEECccCCCCccceEECC
Confidence 4679999997653 3444432 2234468999999999988766667899999999986 7888755322 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++..+ ..+||.+++++ +..+ .++.... ....+.|++| .+++....++..+++++++.. +..+.
T Consensus 302 DG~~l~f~sd~~g--~~~iy~~dl~~-g~~~-~lt~~g~-~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~--g~~~~ 374 (433)
T PRK04922 302 DGKSIYFTSDRGG--RPQIYRVAASG-GSAE-RLTFQGN-YNARASVSPDGKKIAMVHGSGGQYRIAVMDLST--GSVRT 374 (433)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCeE-EeecCCC-CccCEEECCCCCEEEEEECCCCceeEEEEECCC--CCeEE
Confidence 9999999987643 25899999876 4443 3332222 1235677765 566665555666788998753 33333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
|+.+. . ...+.+++|++.++|..... .-..||.+++.++.
T Consensus 375 Lt~~~--------~-~~~p~~spdG~~i~~~s~~~-g~~~L~~~~~~g~~ 414 (433)
T PRK04922 375 LTPGS--------L-DESPSFAPNGSMVLYATREG-GRGVLAAVSTDGRV 414 (433)
T ss_pred CCCCC--------C-CCCceECCCCCEEEEEEecC-CceEEEEEECCCCc
Confidence 33211 1 12356789999888877653 33578988886543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.3e-10 Score=111.06 Aligned_cols=187 Identities=13% Similarity=0.059 Sum_probs=122.8
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+.++||++|.... ....+... ......++|||||++|+|.+.......||++|++++. .+.++...... ...||
T Consensus 182 ~~~~l~i~D~~g~--~~~~lt~~--~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~-~~~l~~~~g~~~~~~~S 256 (433)
T PRK04922 182 MRYALQVADSDGY--NPQTILRS--AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ-RELVASFRGINGAPSFS 256 (433)
T ss_pred ceEEEEEECCCCC--CceEeecC--CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC-EEEeccCCCCccCceEC
Confidence 4567999998543 34445543 2235578999999999998766667889999999886 66666433112 24599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ +.+||++++++ +..+ .++..... ...++|++| .+++.....+..+++++++.. +..+
T Consensus 257 pDG~~l~~~~s~~g--~~~Iy~~d~~~-g~~~-~lt~~~~~-~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~--g~~~ 329 (433)
T PRK04922 257 PDGRRLALTLSRDG--NPEIYVMDLGS-RQLT-RLTNHFGI-DTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG--GSAE 329 (433)
T ss_pred CCCCEEEEEEeCCC--CceEEEEECCC-CCeE-ECccCCCC-ccceEECCCCCEEEEEECCCCCceEEEEECCC--CCeE
Confidence 99999999876543 35899999986 4433 44443322 235677775 577777667777888887753 3232
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++ ++.. .+ ...+.+++|++.+++.... .....|+++++.+++
T Consensus 330 ~l------t~~g-~~-~~~~~~SpDG~~Ia~~~~~-~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 330 RL------TFQG-NY-NARASVSPDGKKIAMVHGS-GGQYRIAVMDLSTGS 371 (433)
T ss_pred Ee------ecCC-CC-ccCEEECCCCCEEEEEECC-CCceeEEEEECCCCC
Confidence 22 2211 11 1235678999988887543 223478999987776
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.23 E-value=2e-10 Score=131.98 Aligned_cols=221 Identities=15% Similarity=0.100 Sum_probs=127.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|.||++||..++.. .|......|. .+|.|+.+|+||.|.+...-............++++.+.+..++++- ..
T Consensus 1370 ~~~~vVllHG~~~s~~--~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l--~~ 1444 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE--DWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI--TP 1444 (1655)
T ss_pred CCCeEEEECCCCCCHH--HHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh--CC
Confidence 4589999999876643 3555455554 46999999999998764211000000111234555555555554432 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-------hccCCC----C-CCCcccc-ccc-C-----CC-
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-------TMLDPT----I-PLTTAEW-EEW-G-----DP- 401 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-------~~~~~~----~-~~~~~~~-~~~-g-----~~- 401 (505)
+++.++||||||.+++.++.++|++++++|..++...+.. ...... . ......+ ..+ . ..
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhc
Confidence 6899999999999999999999999998887654311100 000000 0 0000000 000 0 00
Q ss_pred CCHHHH----------------HHHHhC------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC-----
Q 010654 402 WKEEFY----------------FYMKSY------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK----- 454 (505)
Q Consensus 402 ~~~~~~----------------~~~~~~------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~----- 454 (505)
..+... ..+... +-...+.++++| +|+++|++|..++ ..+.++.+.+.+..
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~P-tLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~ 1602 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTP-LLLVVGEKDVKFK-QIAQKMYREIGKSKESGND 1602 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCC-EEEEEECCCCccH-HHHHHHHHHcccccccccc
Confidence 001000 011111 111346677888 9999999999775 66777777775531
Q ss_pred ---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 455 ---TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 455 ---~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
..+++++++ ++||....+.++.+.. .+.+||.+.-
T Consensus 1603 ~~~~~a~lvvI~---~aGH~~~lE~Pe~f~~--~I~~FL~~~~ 1640 (1655)
T PLN02980 1603 KGKEIIEIVEIP---NCGHAVHLENPLPVIR--ALRKFLTRLH 1640 (1655)
T ss_pred ccccceEEEEEC---CCCCchHHHCHHHHHH--HHHHHHHhcc
Confidence 124788888 8999876555554433 5788998754
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-10 Score=105.60 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=124.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHH-HHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~ 339 (505)
...+.+|++||-.++... |......|+. .+.|..+|..|.|.+.+.-. ..........+.+.++ |-+++++
T Consensus 88 ~~~~plVliHGyGAg~g~--f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F----~~d~~~~e~~fvesiE~WR~~~~L- 159 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGL--FFRNFDDLAK-IRNVYAIDLLGFGRSSRPKF----SIDPTTAEKEFVESIEQWRKKMGL- 159 (365)
T ss_pred cCCCcEEEEeccchhHHH--HHHhhhhhhh-cCceEEecccCCCCCCCCCC----CCCcccchHHHHHHHHHHHHHcCC-
Confidence 345668888985433221 3334456666 79999999999887654211 1222233334555554 5556665
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh----------------c---cCCCCC---------CC
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT----------------M---LDPTIP---------LT 391 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~----------------~---~~~~~~---------~~ 391 (505)
+++.|+|||+|||++..+|.++|++++-.|...|.--...- + .....| +.
T Consensus 160 --~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~G 237 (365)
T KOG4409|consen 160 --EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLG 237 (365)
T ss_pred --cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccc
Confidence 58999999999999999999999999999888763210000 0 000000 00
Q ss_pred c-------------------ccc-ccc------CCCCCHHHHHHHH-----hCCh-hhcccCC--CCCeEEEEccCCCCC
Q 010654 392 T-------------------AEW-EEW------GDPWKEEFYFYMK-----SYSP-VDNVKAQ--NYPHILVTAGLNDPR 437 (505)
Q Consensus 392 ~-------------------~~~-~~~------g~~~~~~~~~~~~-----~~sp-~~~~~~~--~~Pp~Li~~G~~D~~ 437 (505)
. ..+ .+| .+|..+..+..+. +..| ++++..+ .+| +++|+|++|.
T Consensus 238 p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~p-v~fiyG~~dW- 315 (365)
T KOG4409|consen 238 PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVP-VTFIYGDRDW- 315 (365)
T ss_pred hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCC-EEEEecCccc-
Confidence 0 000 000 1122222222221 1233 2344444 487 9999999986
Q ss_pred CCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 438 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 438 vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+....+.++...|. ...++.++.+ ++||+...++++.+++ .+..++.
T Consensus 316 mD~~~g~~~~~~~~--~~~~~~~~v~---~aGHhvylDnp~~Fn~--~v~~~~~ 362 (365)
T KOG4409|consen 316 MDKNAGLEVTKSLM--KEYVEIIIVP---GAGHHVYLDNPEFFNQ--IVLEECD 362 (365)
T ss_pred ccchhHHHHHHHhh--cccceEEEec---CCCceeecCCHHHHHH--HHHHHHh
Confidence 45566777777663 3456778888 8999887777776665 3444543
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.7e-11 Score=102.60 Aligned_cols=211 Identities=17% Similarity=0.235 Sum_probs=124.4
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHH-HHCCcEEEEEcc--cCCCCCch----------hHH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSL-LDRGFIFAIAQI--RGGGELGR----------QWY 311 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l-~~~G~~v~~~d~--rG~~~~g~----------~~~ 311 (505)
.+..-++.|+.. ..+++.|++.++-|-........-...+|.. ...|++|+.||- ||-.--|. -|.
T Consensus 27 ~Mtf~vylPp~a-~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFY 105 (283)
T KOG3101|consen 27 SMTFGVYLPPDA-PRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFY 105 (283)
T ss_pred ceEEEEecCCCc-ccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeE
Confidence 455557889887 5667799999998875543332111223444 456999999994 65431111 111
Q ss_pred -HcccccCCc--chHHHHHHHHHHHHH--cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC
Q 010654 312 -ENGKFLKKK--NTFTDFIACAEYLIK--NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP 386 (505)
Q Consensus 312 -~~~~~~~~~--~~~~D~~~~~~~l~~--~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 386 (505)
++-...|.. ..++-+..-+-.++. .--+|+.+++|+||||||+-++..+.+.|.+++.+.+.+|+.|..
T Consensus 106 vnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~------ 179 (283)
T KOG3101|consen 106 VNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI------ 179 (283)
T ss_pred EecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc------
Confidence 111111211 222222222222222 234799999999999999999999999999999999999999864
Q ss_pred CCCCCccccccc-CCCCCHHHHHHHHhCChhhcccCC---CCCeEEEEccCCCCCCCCCh--HHHHHHHHHhcCCCCCeE
Q 010654 387 TIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQ---NYPHILVTAGLNDPRVMYSE--PAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 387 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~---~~Pp~Li~~G~~D~~vp~~~--~~~~~~~L~~~~~~~~~~ 460 (505)
..|+....+.-| |+ ++..| .++++..-++++ .. .+||-+|..|...+ .| .+.|.++.+... ...+
T Consensus 180 ~cpWGqKAf~gYLG~--~ka~W---~~yDat~lik~y~~~~~-~ilIdqG~~D~Fl~-~qLlPe~l~~a~~~~~--~~~v 250 (283)
T KOG3101|consen 180 NCPWGQKAFTGYLGD--NKAQW---EAYDATHLIKNYRGVGD-DILIDQGAADNFLA-EQLLPENLLEACKATW--QAPV 250 (283)
T ss_pred cCcchHHHhhcccCC--ChHHH---hhcchHHHHHhcCCCCc-cEEEecCccchhhh-hhcChHHHHHHhhccc--cccE
Confidence 344444444323 33 55544 445665444444 34 49999999998876 22 233444443222 1234
Q ss_pred EEEecCCCCCC
Q 010654 461 LFKCELGAGHF 471 (505)
Q Consensus 461 ~~~~~~~~gH~ 471 (505)
+++..+|-.|.
T Consensus 251 ~~r~~~gyDHS 261 (283)
T KOG3101|consen 251 VFRLQEGYDHS 261 (283)
T ss_pred EEEeecCCCcc
Confidence 55544466774
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=5e-10 Score=110.07 Aligned_cols=225 Identities=14% Similarity=0.106 Sum_probs=130.5
Q ss_pred CCCcEEEEEcCCCCcC-C---------CCCCch-hH---HHHHHCCcEEEEEcccCCCC--------CchhHHHcccc--
Q 010654 261 GSDPLLLYGYGSYEIC-N---------DPAFNS-SR---LSLLDRGFIFAIAQIRGGGE--------LGRQWYENGKF-- 316 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~-~---------~~~~~~-~~---~~l~~~G~~v~~~d~rG~~~--------~g~~~~~~~~~-- 316 (505)
.+.++||++|+-.+.. . .++|.. .+ ..+--.-|-|+++|.-|++. .|..-...+.+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 4569999999865422 1 122221 11 23434569999999998753 12111111111
Q ss_pred ---cCCcchHHHHHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCCch---hh-----hh---
Q 010654 317 ---LKKKNTFTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---DV-----LT--- 381 (505)
Q Consensus 317 ---~~~~~~~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~---d~-----~~--- 381 (505)
......+.|+.+++..+++.-.+ +++. ++|+||||..++.++.++|++++.+|..++-. .+ ..
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHH
Confidence 12236788888888777765333 5675 99999999999999999999999888775421 11 11
Q ss_pred -hc-cCC----------CCCC--------------Ccccc--cccCCC----C----------CHHHH------------
Q 010654 382 -TM-LDP----------TIPL--------------TTAEW--EEWGDP----W----------KEEFY------------ 407 (505)
Q Consensus 382 -~~-~~~----------~~~~--------------~~~~~--~~~g~~----~----------~~~~~------------ 407 (505)
.. .++ ..|. ....+ ..++.. . ..+.|
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 00 010 0010 00000 001110 0 00111
Q ss_pred ---------HHHHhC-------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 408 ---------FYMKSY-------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 408 ---------~~~~~~-------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
..+..+ +....+.++++| +|+|+|+.|..+|+.+++++++.+...+..+++++++. ..||.
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~P-tLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s--~~GH~ 368 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEAN-VLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIES--INGHM 368 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCC-EEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECC--CCCcc
Confidence 000001 123345577888 99999999999999999999999987666677777762 37897
Q ss_pred CCCChHHHHHHHHHHHHHHHH
Q 010654 472 SKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 472 ~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.....++.+.. .+.+||.+
T Consensus 369 ~~le~p~~~~~--~I~~FL~~ 387 (389)
T PRK06765 369 AGVFDIHLFEK--KIYEFLNR 387 (389)
T ss_pred hhhcCHHHHHH--HHHHHHcc
Confidence 65444544433 46778754
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=97.60 Aligned_cols=180 Identities=19% Similarity=0.195 Sum_probs=124.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
...|++|++|||++...+.... ........+||+|+.++|--+.. ...-...+.++...++|+.+.-.
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----------~htL~qt~~~~~~gv~filk~~~- 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----------VHTLEQTMTQFTHGVNFILKYTE- 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc----------cccHHHHHHHHHHHHHHHHHhcc-
Confidence 4579999999999765442222 23456778999999998853321 12223678999999999988632
Q ss_pred CCCcEEEEeeChHHHHHHHHHhh-CCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh-hh
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP-VD 417 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp-~~ 417 (505)
..+.+.+.|||+|+.+++.+.++ +..++.+++..+|++++...... ... ...|-.++. ....|+ +.
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~t-e~g------~dlgLt~~~-----ae~~Scdl~ 201 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNT-ESG------NDLGLTERN-----AESVSCDLW 201 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCC-ccc------cccCcccch-----hhhcCccHH
Confidence 34679999999999999887765 44588999999999997543211 100 112222111 122344 33
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
..+.++.| +|++.++.|.---++|.+.|+..++++ ++..|+ +.+|.
T Consensus 202 ~~~~v~~~-ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~---n~~hy 247 (270)
T KOG4627|consen 202 EYTDVTVW-ILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFK---NYDHY 247 (270)
T ss_pred HhcCceee-eeEeeecccCcHHHHhhhhHHHHhhhc----ceeecC---Ccchh
Confidence 45566776 999999999998999999999999874 455787 77885
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.5e-09 Score=103.90 Aligned_cols=179 Identities=11% Similarity=0.061 Sum_probs=117.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ceeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~ 85 (505)
..+||++|.... ....+... ......+.|||||++|++.+.......||++|+.++. .+++..... .....|||
T Consensus 183 ~~~i~i~d~dg~--~~~~lt~~--~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~-~~~l~~~~g~~~~~~wSP 257 (429)
T PRK01742 183 PYEVRVADYDGF--NQFIVNRS--SQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA-RKVVASFRGHNGAPAFSP 257 (429)
T ss_pred eEEEEEECCCCC--CceEeccC--CCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc-eEEEecCCCccCceeECC
Confidence 478999997432 23334432 2345689999999999998766566789999999886 666653321 12345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|++....++ ..+||++++++ +... .++.... ....+.|++| .+++....++..+++.++.. +...+.
T Consensus 258 DG~~La~~~~~~g--~~~Iy~~d~~~-~~~~-~lt~~~~-~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~--~~~~~~ 330 (429)
T PRK01742 258 DGSRLAFASSKDG--VLNIYVMGANG-GTPS-QLTSGAG-NNTEPSWSPDGQSILFTSDRSGSPQVYRMSAS--GGGASL 330 (429)
T ss_pred CCCEEEEEEecCC--cEEEEEEECCC-CCeE-eeccCCC-CcCCEEECCCCCEEEEEECCCCCceEEEEECC--CCCeEE
Confidence 9999999875433 35899999876 4433 4554333 3456788876 56777666677777776654 332221
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+ . ...+ ...+++|++.+++... ..++.+++.+++
T Consensus 331 l------~--~~~~---~~~~SpDG~~ia~~~~-----~~i~~~Dl~~g~ 364 (429)
T PRK01742 331 V------G--GRGY---SAQISADGKTLVMING-----DNVVKQDLTSGS 364 (429)
T ss_pred e------c--CCCC---CccCCCCCCEEEEEcC-----CCEEEEECCCCC
Confidence 1 1 1111 2457899998877654 467888988776
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.2e-10 Score=105.42 Aligned_cols=226 Identities=16% Similarity=0.148 Sum_probs=135.5
Q ss_pred CCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEccc--------------CCC-CCchhHHHcccccCCcchH
Q 010654 260 DGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIR--------------GGG-ELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~r--------------G~~-~~g~~~~~~~~~~~~~~~~ 323 (505)
+++.|++++.||-...... ..+........+.|++++.+|-. |.+ ++-.+|........ ...+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccch
Confidence 4668888888875443211 11122223445568888887322 322 33344443221111 2334
Q ss_pred HHHHH-HHH-HHHHcCCCCC--CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC---CCCCCcccc-
Q 010654 324 TDFIA-CAE-YLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---TIPLTTAEW- 395 (505)
Q Consensus 324 ~D~~~-~~~-~l~~~~~~d~--~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~---~~~~~~~~~- 395 (505)
++++. -+- .+.+...++. ++.+|+|+||||+-++.+|.++|++|+.+.+.+|+++....+... ..+.....+
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~ 209 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFN 209 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHH
Confidence 44432 122 2333344455 389999999999999999999999999999999999876443322 111111111
Q ss_pred cccCCCCCHHHHHHHHhCChhhcccC---C----------CCCeEEEEccCCCCCCC--CChHHHHHHHHHhcCCCCCeE
Q 010654 396 EEWGDPWKEEFYFYMKSYSPVDNVKA---Q----------NYPHILVTAGLNDPRVM--YSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 396 ~~~g~~~~~~~~~~~~~~sp~~~~~~---~----------~~Pp~Li~~G~~D~~vp--~~~~~~~~~~L~~~~~~~~~~ 460 (505)
..+|...++. +++++|..++++ . ..|++++-+|..|.... ...++.+.++++++|.+..+.
T Consensus 210 ~~~G~~~~~~----w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~ 285 (316)
T COG0627 210 AMLGPDSDPA----WQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVR 285 (316)
T ss_pred HhcCCCcccc----ccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceee
Confidence 2244443321 245677666653 1 23458999999998774 344889999999999998766
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.++ ++.|... --...+...+.|+.+.|+..
T Consensus 286 ~~~---~G~Hsw~----~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 286 DQP---GGDHSWY----FWASQLADHLPWLAGALGLA 315 (316)
T ss_pred eCC---CCCcCHH----HHHHHHHHHHHHHHHHhccC
Confidence 664 7788532 11223556789999988754
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=104.55 Aligned_cols=213 Identities=20% Similarity=0.229 Sum_probs=125.7
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
...|.||++||...+. ..|......|... |+.|+.+|..|.|-.+.. .........+....+..+......
T Consensus 56 ~~~~pvlllHGF~~~~--~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~------~~~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASS--FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL------PRGPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccCCc--ccHhhhccccccccceEEEEEecCCCCcCCCC------CCCCceehhHHHHHHHHHHHhhcC
Confidence 4578999999975533 3355444455554 799999999995532211 111114455555555554444332
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEE---ecCCchhhhhhc-------cC-------CCCCC---Cc-ccccc-
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV---AAVPFVDVLTTM-------LD-------PTIPL---TT-AEWEE- 397 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v---~~~~~~d~~~~~-------~~-------~~~~~---~~-~~~~~- 397 (505)
+++-++|+|+||+++..+|+.+|+..+..+ ...+........ .+ ...+. .. ..|.+
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 459999999999999999999999999988 443322110000 00 00000 00 00100
Q ss_pred --------cCCC-CCHHHHHHH---------------------Hh--CChhhcccCCC-CCeEEEEccCCCCCCCCChHH
Q 010654 398 --------WGDP-WKEEFYFYM---------------------KS--YSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 398 --------~g~~-~~~~~~~~~---------------------~~--~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
+.++ ...+....+ .. ..+...++++. +| +||++|+.|+.+|.+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p-vlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCP-VLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCc-eEEEEcCcCCccCHHHHH
Confidence 0011 000000000 00 22334567775 88 999999999999998776
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 445 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.+.+.+ -.+++...+ ++||....++++.+.. .+..|+.++
T Consensus 285 ~~~~~~----pn~~~~~I~---~~gH~~h~e~Pe~~~~--~i~~Fi~~~ 324 (326)
T KOG1454|consen 285 ELKKKL----PNAELVEIP---GAGHLPHLERPEEVAA--LLRSFIARL 324 (326)
T ss_pred HHHhhC----CCceEEEeC---CCCcccccCCHHHHHH--HHHHHHHHh
Confidence 665554 456777777 8999877667765544 678898775
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.9e-10 Score=117.07 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=65.4
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
...||.+|.+..+ . +...|.||++||.++... .|......| ..||.|+.+|+||+|.+...... ....
T Consensus 8 ~~~~g~~l~~~~~-g------~~~~~~ivllHG~~~~~~--~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~--~~~~ 75 (582)
T PRK05855 8 VSSDGVRLAVYEW-G------DPDRPTVVLVHGYPDNHE--VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRT--AAYT 75 (582)
T ss_pred EeeCCEEEEEEEc-C------CCCCCeEEEEcCCCchHH--HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcc--cccC
Confidence 3458888865422 1 123589999999875532 355555555 67999999999999876431100 0001
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
-....+|+.++++.+ + . +.++.++|||+||.+++.++.+
T Consensus 76 ~~~~a~dl~~~i~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 76 LARLADDFAAVIDAV---S-P-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHHHHHHHHh---C-C-CCcEEEEecChHHHHHHHHHhC
Confidence 112334444444443 1 1 2349999999999888777664
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-10 Score=119.45 Aligned_cols=129 Identities=18% Similarity=0.114 Sum_probs=92.0
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-C-cEEEEEccc-CCCCCchhHHHcccccCCcc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-G-FIFAIAQIR-GGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G-~~v~~~d~r-G~~~~g~~~~~~~~~~~~~~ 321 (505)
-+...++.|... ...++.|+||++|||+......... ....|+.. + ++|+.+||| |.-|+..... ....+..
T Consensus 78 cl~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~---~~~~~n~ 152 (493)
T cd00312 78 CLYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGD---IELPGNY 152 (493)
T ss_pred CCeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCC---CCCCcch
Confidence 455667778754 3456789999999986543333222 23455554 3 999999999 6666644221 1223345
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCchh
Q 010654 322 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVD 378 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d 378 (505)
.+.|+..|++|+.++ -..||+||.|+|+|+||++++.++.. .+.+|+++|+.+|...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 689999999999876 23799999999999999999988875 2347999998887654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=98.95 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=87.3
Q ss_pred eEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHH
Q 010654 247 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF 326 (505)
Q Consensus 247 ~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~ 326 (505)
+..+++|... +.+|++|+.||-. .. ...|....+.+++.||+|+.+|+..-.+ .....+++++
T Consensus 5 ~l~v~~P~~~----g~yPVv~f~~G~~-~~-~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~~ 67 (259)
T PF12740_consen 5 PLLVYYPSSA----GTYPVVLFLHGFL-LI-NSWYSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVASA 67 (259)
T ss_pred CeEEEecCCC----CCcCEEEEeCCcC-CC-HHHHHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHHH
Confidence 4567888765 7899999999975 22 2226666788999999999999653221 2223567888
Q ss_pred HHHHHHHHHc---C-----CCCCCcEEEEeeChHHHHHHHHHhhC-----CCceeEEEecCCch
Q 010654 327 IACAEYLIKN---C-----YCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFV 377 (505)
Q Consensus 327 ~~~~~~l~~~---~-----~~d~~rv~i~G~S~GG~~~~~~~~~~-----p~~~~a~v~~~~~~ 377 (505)
.+.++|+.+. . .+|-+|++|+|||.||-++..++..+ +.+|++++...|+-
T Consensus 68 ~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 68 AEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 8889998763 1 25888999999999999999888876 45899999999975
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=105.84 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=64.7
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC------chhHHHcc-------c------ccC-Cc
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL------GRQWYENG-------K------FLK-KK 320 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~------g~~~~~~~-------~------~~~-~~ 320 (505)
+++|+||+-||..+.+. .|...+..||++||+|++++.|-.... ...-.... . ... ..
T Consensus 98 ~~~PvvIFSHGlgg~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 77999999999876644 377788999999999999999954321 11100000 0 000 00
Q ss_pred -----------chHHHHHHHHHHHHH--c------------------CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeE
Q 010654 321 -----------NTFTDFIACAEYLIK--N------------------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA 369 (505)
Q Consensus 321 -----------~~~~D~~~~~~~l~~--~------------------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a 369 (505)
.=..|+..+++.|.+ . +.+|.++|+++|||+||..++.++.+. .+|++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcce
Confidence 113456666666643 1 346788999999999999999988874 68999
Q ss_pred EEecCC
Q 010654 370 AVAAVP 375 (505)
Q Consensus 370 ~v~~~~ 375 (505)
+|+.-|
T Consensus 255 ~I~LD~ 260 (379)
T PF03403_consen 255 GILLDP 260 (379)
T ss_dssp EEEES-
T ss_pred EEEeCC
Confidence 987655
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.1e-10 Score=107.74 Aligned_cols=129 Identities=21% Similarity=0.268 Sum_probs=89.3
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC---CcCCCCCCchhHHHHHHCC-cEEEEEcccCCCCCch-hHHHcc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFNSSRLSLLDRG-FIFAIAQIRGGGELGR-QWYENG 314 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~---~~~~~~~~~~~~~~l~~~G-~~v~~~d~rG~~~~g~-~~~~~~ 314 (505)
|.|. +...++.|. . ..++.|+||++|||. ++...+.|+ .+.|+++| ++|+.+|||-.- +|- ++....
T Consensus 76 sEDC--L~LNIwaP~-~--~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~ 147 (491)
T COG2272 76 SEDC--LYLNIWAPE-V--PAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGA-LGFLDLSSLD 147 (491)
T ss_pred cccc--eeEEeeccC-C--CCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCccccc-ceeeehhhcc
Confidence 3454 444556776 2 236689999999984 333444444 47899998 999999999543 221 222111
Q ss_pred --cccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCch
Q 010654 315 --KFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFV 377 (505)
Q Consensus 315 --~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~ 377 (505)
........+.|++.|++|+.++ -.-||+.|.|+|.|+|++.++.+++. |. +|+.+|+.+|..
T Consensus 148 ~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 148 TEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 1111225689999999999876 34699999999999999999998874 65 677777776644
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.8e-08 Score=100.23 Aligned_cols=187 Identities=14% Similarity=0.065 Sum_probs=118.2
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
...+||+++.... ..+.++.. ......+.|||||++|+|.........||++|++++. .+.+....... ...|+
T Consensus 168 ~~~~l~~~d~~g~--~~~~l~~~--~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~-~~~~~~~~~~~~~~~~s 242 (417)
T TIGR02800 168 RRYELQVADYDGA--NPQTITRS--REPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ-REKVASFPGMNGAPAFS 242 (417)
T ss_pred CcceEEEEcCCCC--CCEEeecC--CCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEeecCCCCccceEEC
Confidence 3456888887432 34445432 2245678999999999998766566789999999986 55555332111 23499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||+.|++....++ ..+||.+++.+ +..+ .++.... ......|++| .+++...+.+..+++++++. +...+
T Consensus 243 pDg~~l~~~~~~~~--~~~i~~~d~~~-~~~~-~l~~~~~-~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~--~~~~~ 315 (417)
T TIGR02800 243 PDGSKLAVSLSKDG--NPDIYVMDLDG-KQLT-RLTNGPG-IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD--GGEVR 315 (417)
T ss_pred CCCCEEEEEECCCC--CccEEEEECCC-CCEE-ECCCCCC-CCCCEEECCCCCEEEEEECCCCCceEEEEECC--CCCEE
Confidence 99999999876532 35899999986 3333 3333222 1224566654 67777777777788888875 33222
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++ ... . ....+.++++++.++++.... .-..++.+++.++.
T Consensus 316 ~l~------~~~-~-~~~~~~~spdg~~i~~~~~~~-~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 316 RLT------FRG-G-YNASPSWSPDGDLIAFVHREG-GGFNIAVMDLDGGG 357 (417)
T ss_pred Eee------cCC-C-CccCeEECCCCCEEEEEEccC-CceEEEEEeCCCCC
Confidence 222 111 1 122345678898887776543 23478999987765
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.9e-09 Score=104.62 Aligned_cols=109 Identities=16% Similarity=0.053 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCCcCCCCCC---chhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 262 SDPLLLYGYGSYEICNDPAF---NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~---~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
..+.||++|+......-... +.....|+++||.|+++|.||.|.....+ .......+++.++++.+.+.
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~------~~ddY~~~~i~~al~~v~~~-- 258 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK------TFDDYIRDGVIAALEVVEAI-- 258 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC------ChhhhHHHHHHHHHHHHHHh--
Confidence 34567777875432221111 24567899999999999999887543321 11123445688888888764
Q ss_pred CCCCcEEEEeeChHHHHHH----HHHhhC-CCceeEEEecCCchh
Q 010654 339 CTKEKLCIEGRSAGGLLIG----AVLNMR-PDLFKAAVAAVPFVD 378 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~----~~~~~~-p~~~~a~v~~~~~~d 378 (505)
...+++.++|+|+||.+++ .+++.+ +++++.++..+...|
T Consensus 259 ~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 259 TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 2457899999999999852 234444 678888877665554
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.9e-08 Score=97.87 Aligned_cols=182 Identities=14% Similarity=0.050 Sum_probs=116.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
.+||++++.++. ...+... ......+.|||||+.|++........+||++|+.++. .+.++...... ...|+||
T Consensus 214 ~~i~v~d~~~g~--~~~~~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~s~d 288 (417)
T TIGR02800 214 PEIYVQDLATGQ--REKVASF--PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ-LTRLTNGPGIDTEPSWSPD 288 (417)
T ss_pred cEEEEEECCCCC--EEEeecC--CCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC-EEECCCCCCCCCCEEECCC
Confidence 579999997752 2333322 2233457899999999988766667899999999886 77776543222 2359999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
|++|+|.++..+ ..+||.+++.+ +..+ .++.... ....+.|++| .+++.....+..+++++++.. +..+.+
T Consensus 289 g~~l~~~s~~~g--~~~iy~~d~~~-~~~~-~l~~~~~-~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--~~~~~l 361 (417)
T TIGR02800 289 GKSIAFTSDRGG--SPQIYMMDADG-GEVR-RLTFRGG-YNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--GGERVL 361 (417)
T ss_pred CCEEEEEECCCC--CceEEEEECCC-CCEE-EeecCCC-CccCeEECCCCCEEEEEEccCCceEEEEEeCCC--CCeEEc
Confidence 999999987643 24899999876 4333 3332222 2345677765 556665555666788888763 322222
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
+. .. ....+.++++++.+++....... ..+++.+..+
T Consensus 362 ~~--------~~-~~~~p~~spdg~~l~~~~~~~~~-~~l~~~~~~g 398 (417)
T TIGR02800 362 TD--------TG-LDESPSFAPNGRMILYATTRGGR-GVLGLVSTDG 398 (417)
T ss_pred cC--------CC-CCCCceECCCCCEEEEEEeCCCc-EEEEEEECCC
Confidence 21 11 11234678899988887775544 4677776543
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-08 Score=100.08 Aligned_cols=191 Identities=16% Similarity=0.087 Sum_probs=123.3
Q ss_pred CCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccc-eEEEEEeCCCCCceeeeeccccceeE
Q 010654 3 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKIT-RFVFYLDVSKPEELRVLTPRVVGVDT 81 (505)
Q Consensus 3 ~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~-~~l~~~d~~~~~~~~~l~~~~~~~~~ 81 (505)
...++.++++.|-- +.... .+.. ...-...+.|||||+.+++..-.... .++|++|++++...+.+.........
T Consensus 168 ~~~~~~~l~~~D~d-g~~~~-~l~~--~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P 243 (425)
T COG0823 168 GGPLPYELALGDYD-GYNQQ-KLTD--SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAP 243 (425)
T ss_pred cCCCCceEEEEccC-Cccee-Eecc--cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCc
Confidence 45677788888852 21112 2221 12234468999999999998655544 79999999999733333322222234
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
.|||||++|+|...+++ +.+||++|+.+.. .+.++....... ...|++ +.++|+..+.|+.++++++++ +.
T Consensus 244 ~fspDG~~l~f~~~rdg--~~~iy~~dl~~~~--~~~Lt~~~gi~~-~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~--g~ 316 (425)
T COG0823 244 AFSPDGSKLAFSSSRDG--SPDIYLMDLDGKN--LPRLTNGFGINT-SPSWSPDGSKIVFTSDRGGRPQIYLYDLE--GS 316 (425)
T ss_pred cCCCCCCEEEEEECCCC--CccEEEEcCCCCc--ceecccCCcccc-CccCCCCCCEEEEEeCCCCCcceEEECCC--CC
Confidence 59999999999998863 4699999998733 224554443322 555655 479999999999999999877 44
Q ss_pred cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 160 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..++ +++...... .+.+++|++.++|....... ..+...++.++.
T Consensus 317 ~~~r------iT~~~~~~~--~p~~SpdG~~i~~~~~~~g~-~~i~~~~~~~~~ 361 (425)
T COG0823 317 QVTR------LTFSGGGNS--NPVWSPDGDKIVFESSSGGQ-WDIDKNDLASGG 361 (425)
T ss_pred ceeE------eeccCCCCc--CccCCCCCCEEEEEeccCCc-eeeEEeccCCCC
Confidence 3332 333222222 35678999999988754222 556666665554
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.00 E-value=8e-09 Score=90.18 Aligned_cols=182 Identities=18% Similarity=0.123 Sum_probs=99.3
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+|+||...+..+.......+.+.+.|. .+..+|++ ....+..+.++.+++.. .++
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------------~~p~~a~~~l~~~i~~~--~~~ 59 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------------PFPEEAIAQLEQLIEEL--KPE 59 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------------cCHHHHHHHHHHHHHhC--CCC
Confidence 48999997655444333334456777664 44555443 22344455555555553 234
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCC--CCHHHHHHHHhCChhhccc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP--WKEEFYFYMKSYSPVDNVK 420 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~sp~~~~~ 420 (505)
.++++|.|+||+.+.+++.+++ +++ |..+|.+.....+.. .+. ......++.. ..+.....++++.... .
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~-~iG--~~~~~~~~e~~~~~~~~~~~l~~l~~~~--~ 131 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD-YIG--EQTNPYTGESYELTEEHIEELKALEVPY--P 131 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH-hhC--ccccCCCCccceechHhhhhcceEeccc--c
Confidence 5999999999999999998764 344 777887765444321 110 0000001111 1222222222211110 1
Q ss_pred CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 010654 421 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 421 ~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 490 (505)
.... ++++++++.|+.+++.++.+.++. +..++.+ |++|.+.. .. +....+.+|+
T Consensus 132 ~~~~-~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~---ggdH~f~~-f~---~~l~~i~~f~ 186 (187)
T PF05728_consen 132 TNPE-RYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEE---GGDHSFQD-FE---EYLPQIIAFL 186 (187)
T ss_pred CCCc-cEEEEEecCCcccCHHHHHHHhcC-------ceEEEEe---CCCCCCcc-HH---HHHHHHHHhh
Confidence 1133 499999999999999666554432 2234454 77997642 22 2233577776
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-08 Score=112.17 Aligned_cols=107 Identities=11% Similarity=0.042 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC-cchHHHHHHHHHHHHHcC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK-KNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~ 337 (505)
..|.||++||.......+...+ ....|+++||.|+++|+. ... ..- ...... ...+.++.++++.+.+..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~~~--~~~---~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG-SPD--KVE---GGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC-CCC--hhH---cCccCCHHHHHHHHHHHHHHHHHhh
Confidence 4588999999876654433322 257888999999999963 221 110 000111 122234455555554443
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCch
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFV 377 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~ 377 (505)
.+++.++|+|+||.+++.+++.+ +++++.++..+...
T Consensus 140 ---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 140 ---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred ---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 25799999999999998877644 55788877644433
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.8e-08 Score=98.49 Aligned_cols=176 Identities=11% Similarity=0.063 Sum_probs=107.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||+|++.+++ .+.+... +.....++|||||++|++........+||++|++++. .+.++..... ....|||
T Consensus 227 ~~~i~i~dl~tg~--~~~l~~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSp 301 (429)
T PRK01742 227 KSQLVVHDLRSGA--RKVVASF--RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSP 301 (429)
T ss_pred CcEEEEEeCCCCc--eEEEecC--CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECC
Confidence 3569999997753 3334322 2233468999999999998765556789999999886 7888764422 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||.++..+ +..+ .++... ....|++| .+++... ..+.++++.. +..+.
T Consensus 302 DG~~i~f~s~~~g--~~~I~~~~~~~-~~~~-~l~~~~----~~~~~SpDG~~ia~~~~----~~i~~~Dl~~--g~~~~ 367 (429)
T PRK01742 302 DGQSILFTSDRSG--SPQVYRMSASG-GGAS-LVGGRG----YSAQISADGKTLVMING----DNVVKQDLTS--GSTEV 367 (429)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCeE-EecCCC----CCccCCCCCCEEEEEcC----CCEEEEECCC--CCeEE
Confidence 9999999987643 35999999875 3334 344322 13456665 4444432 3466677653 22222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
++.. .....++++|+++.+++... ...-..++..+..+
T Consensus 368 lt~~---------~~~~~~~~sPdG~~i~~~s~-~g~~~~l~~~~~~G 405 (429)
T PRK01742 368 LSST---------FLDESPSISPNGIMIIYSST-QGLGKVLQLVSADG 405 (429)
T ss_pred ecCC---------CCCCCceECCCCCEEEEEEc-CCCceEEEEEECCC
Confidence 2211 11123567899997777654 33333455555443
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.6e-09 Score=90.35 Aligned_cols=224 Identities=17% Similarity=0.121 Sum_probs=123.1
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccc
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 315 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~ 315 (505)
+.++.+||..+++. .+|.+. +.+-.+.+-|+++... -.|....+..+.+||.|+..||||.|++-..-..-..
T Consensus 8 ~~l~~~DG~~l~~~-~~pA~~-----~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQ-RFPADG-----KASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccc-cccCCC-----CCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 45678899999887 555543 3443444445555432 1234445677778999999999999976443211101
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC--CchhhhhhccC-------C
Q 010654 316 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV--PFVDVLTTMLD-------P 386 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~~~~~~-------~ 386 (505)
.........|+.++++++.+.-. ...+..+|||+||.+...+.. ++..-.+++..+ +..-++..... .
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWN 157 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCC--CCceEEeeccccceeeccccc-CcccceeeEeccccccccchhhhhcccceeecc
Confidence 11223567899999999988421 235778999999987766544 562222222222 22222111000 0
Q ss_pred -CCC---CCccc--ccccCCCC------CHHHHHHHHh-----CChh-----hcccCCCCCeEEEEccCCCCCCCCChHH
Q 010654 387 -TIP---LTTAE--WEEWGDPW------KEEFYFYMKS-----YSPV-----DNVKAQNYPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 387 -~~~---~~~~~--~~~~g~~~------~~~~~~~~~~-----~sp~-----~~~~~~~~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
..+ ..... +...|.++ -.+...|.+. .+|. +..+++++| |..+...+|+-+|+....
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtP-i~~~~~~DD~w~P~As~d 236 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTP-ITFSRALDDPWAPPASRD 236 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCc-eeeeccCCCCcCCHHHHH
Confidence 000 00000 01112221 0111112221 1221 224456887 999999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEecC-CCCCCC
Q 010654 445 KFVAKLREMKTDDNILLFKCEL-GAGHFS 472 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~-~~gH~~ 472 (505)
.|......+ +.++..++... --||..
T Consensus 237 ~f~~~y~nA--pl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 237 AFASFYRNA--PLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HHHHhhhcC--cccceecCcccCcccchh
Confidence 998887765 44556665321 147843
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.4e-09 Score=87.89 Aligned_cols=210 Identities=13% Similarity=0.082 Sum_probs=118.2
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
-.|+.+-|.-++. ...|.+....+.. .-+.++..|.||.|-+-..-+ ...-+--.+|..+|++-+.+. +-+
T Consensus 43 ~~iLlipGalGs~-~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R----kf~~~ff~~Da~~avdLM~aL---k~~ 114 (277)
T KOG2984|consen 43 NYILLIPGALGSY-KTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER----KFEVQFFMKDAEYAVDLMEAL---KLE 114 (277)
T ss_pred ceeEecccccccc-cccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc----cchHHHHHHhHHHHHHHHHHh---CCC
Confidence 3456666765543 3346654443333 248999999998775422111 111123457777888877765 347
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch--hhhhhccCCCCCCCcccc---------cccCCCCCHHHHH-HH
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV--DVLTTMLDPTIPLTTAEW---------EEWGDPWKEEFYF-YM 410 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~--d~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~-~~ 410 (505)
++.|+|||-||..++.+|+++++.+.-.|...+.. +-...+.-..+.- ...| ..||...-+..++ |.
T Consensus 115 ~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRd-v~kWs~r~R~P~e~~Yg~e~f~~~wa~wv 193 (277)
T KOG2984|consen 115 PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRD-VNKWSARGRQPYEDHYGPETFRTQWAAWV 193 (277)
T ss_pred CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHH-HhhhhhhhcchHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999998665555443321 1111110001100 0111 1122211222222 11
Q ss_pred HhCChh----------hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH
Q 010654 411 KSYSPV----------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 480 (505)
Q Consensus 411 ~~~sp~----------~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 480 (505)
....-. .-+.++++| +||+||..|+.|+-.++--+-..+. -.++.++| .++|.+..-..+.+
T Consensus 194 D~v~qf~~~~dG~fCr~~lp~vkcP-tli~hG~kDp~~~~~hv~fi~~~~~----~a~~~~~p---eGkHn~hLrya~eF 265 (277)
T KOG2984|consen 194 DVVDQFHSFCDGRFCRLVLPQVKCP-TLIMHGGKDPFCGDPHVCFIPVLKS----LAKVEIHP---EGKHNFHLRYAKEF 265 (277)
T ss_pred HHHHHHhhcCCCchHhhhcccccCC-eeEeeCCcCCCCCCCCccchhhhcc----cceEEEcc---CCCcceeeechHHH
Confidence 111111 236788998 9999999999999888755443333 23456777 67897643333333
Q ss_pred HHHHHHHHHHHH
Q 010654 481 REAAFTYTFLMR 492 (505)
Q Consensus 481 ~~~~~~~~fl~~ 492 (505)
+. .+++||.+
T Consensus 266 nk--lv~dFl~~ 275 (277)
T KOG2984|consen 266 NK--LVLDFLKS 275 (277)
T ss_pred HH--HHHHHHhc
Confidence 33 56788864
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.4e-07 Score=83.71 Aligned_cols=204 Identities=19% Similarity=0.138 Sum_probs=119.9
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
..+.+.+.+|..+...-.|-... ..+.+..+||-+||.||+..+ |......|.+.|+.++.+||+|.+......
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~--- 80 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYP--- 80 (297)
T ss_pred EEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCc---
Confidence 44556666776655544444332 233456699999999998766 555668899999999999999987532211
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch-------------hhh
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-------------DVL 380 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-------------d~~ 380 (505)
.-...-.+-...++.|.++-.++ +++.++|||.|+-.++.++..+| ..++++.+|.- ...
T Consensus 81 ----~~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i 153 (297)
T PF06342_consen 81 ----DQQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETI 153 (297)
T ss_pred ----ccccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHH
Confidence 11122244455555566554454 78999999999999999999886 34555554420 000
Q ss_pred hhccCCCCCCCcc------cccccCCC--CCHHHHHHHHhCCh---------hhcccCCCCCeEEEEccCCCCCCCCChH
Q 010654 381 TTMLDPTIPLTTA------EWEEWGDP--WKEEFYFYMKSYSP---------VDNVKAQNYPHILVTAGLNDPRVMYSEP 443 (505)
Q Consensus 381 ~~~~~~~~~~~~~------~~~~~g~~--~~~~~~~~~~~~sp---------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~ 443 (505)
.++.+ .+|.... .|...|-- ...+....++...- ++.+.+.++| +|++.|.+|..|.-+.+
T Consensus 154 ~~l~~-~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ik-vli~ygg~DhLIEeeI~ 231 (297)
T PF06342_consen 154 NYLYD-LLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIK-VLIAYGGKDHLIEEEIS 231 (297)
T ss_pred HHHHH-HhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCc-EEEEEcCcchhhHHHHH
Confidence 11110 0111000 01112221 22333333332111 2333444676 99999999999877777
Q ss_pred HHHHHHHHh
Q 010654 444 AKFVAKLRE 452 (505)
Q Consensus 444 ~~~~~~L~~ 452 (505)
.+++...+.
T Consensus 232 ~E~a~~f~~ 240 (297)
T PF06342_consen 232 FEFAMKFKG 240 (297)
T ss_pred HHHHHHhCC
Confidence 777666643
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.7e-10 Score=100.86 Aligned_cols=78 Identities=26% Similarity=0.247 Sum_probs=62.6
Q ss_pred cEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 293 FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
|.|+++|.||.|.....+ ..........|+.+.++.+++.-.+ +++.++|+||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHW----DPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCC----GSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCc----cCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 679999999998765311 1233446678999999988886434 4599999999999999999999999999999
Q ss_pred cCCc
Q 010654 373 AVPF 376 (505)
Q Consensus 373 ~~~~ 376 (505)
.++.
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9884
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-08 Score=91.72 Aligned_cols=110 Identities=17% Similarity=0.171 Sum_probs=68.0
Q ss_pred CCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCC-CCCchhHHHcccccCCcchHHHHHHHHHHHHHcC--
Q 010654 262 SDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGG-GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-- 337 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~-~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-- 337 (505)
+.-+||+|-|-...-....|- .....|.+.||.|+.+..+-| +|+|..-. .++++|+.++|+||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhcc
Confidence 456899996644333333343 334566667999999999863 45554322 268999999999999873
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCC-----CceeEEEecCCchhh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRP-----DLFKAAVAAVPFVDV 379 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p-----~~~~a~v~~~~~~d~ 379 (505)
.-..++|.++|||-|..-++.++.... ..+.++|+.+||.|-
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 235689999999999999999887642 469999999999883
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.6e-08 Score=96.63 Aligned_cols=182 Identities=16% Similarity=0.129 Sum_probs=113.5
Q ss_pred CceEEEEECCCCCCCCeEEEE---ecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeecccc-c-e
Q 010654 7 PDKAWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVV-G-V 79 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~---~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~-~-~ 79 (505)
-.+|+++++.++... ..-.. .....+...+.|++|++.|++...+. ....++++|++++. .+.+..... + .
T Consensus 157 ~v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~-~~~~~~e~~~~Wv 234 (353)
T PF00930_consen 157 RVSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGE-TRVVLEETSDGWV 234 (353)
T ss_dssp EEEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTT-CEEEEEEESSSSS
T ss_pred ceEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCc-eeEEEEecCCcce
Confidence 356899999776322 22222 12344566899999999666664433 46789999998886 444432221 1 1
Q ss_pred ----eEEee-eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe--CCEEEEEEecCCeeEEEEE
Q 010654 80 ----DTAAS-HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 80 ----~~~~s-~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~d~l~~~~~~~~~~~l~~~ 152 (505)
...+. +++..+++.+..++ ..+||+++.++ +..+ .++.......+-+.|+ ++.++|+++.....+..+|
T Consensus 235 ~~~~~~~~~~~~~~~~l~~s~~~G--~~hly~~~~~~-~~~~-~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY 310 (353)
T PF00930_consen 235 DVYDPPHFLGPDGNEFLWISERDG--YRHLYLYDLDG-GKPR-QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLY 310 (353)
T ss_dssp SSSSEEEE-TTTSSEEEEEEETTS--SEEEEEEETTS-SEEE-ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEE
T ss_pred eeecccccccCCCCEEEEEEEcCC--CcEEEEEcccc-ccee-ccccCceeecccceEcCCCCEEEEEecCCCCCceEEE
Confidence 12244 88999888888654 46999999987 4444 4554433222334444 4589999887554444555
Q ss_pred EcCCC-CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc
Q 010654 153 RLPAV-GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 153 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
.++.+ ++.+++|++..... + ..++|++++.++.+++++..|+
T Consensus 311 ~v~~~~~~~~~~LT~~~~~~-----~---~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 311 RVSLDSGGEPKCLTCEDGDH-----Y---SASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp EEETTETTEEEESSTTSSTT-----E---EEEE-TTSSEEEEEEESSSSCE
T ss_pred EEEeCCCCCeEeccCCCCCc-----e---EEEECCCCCEEEEEEcCCCCCC
Confidence 55555 66677777542211 1 2456899999999999999985
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-08 Score=95.48 Aligned_cols=129 Identities=16% Similarity=0.059 Sum_probs=89.4
Q ss_pred EEEEEECC-CCceeeEEEEEeCCccCC---CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 234 ERKWASAS-DGTQIPICIVYRKNLVKL---DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 234 ~~~~~~s~-dG~~i~~~l~~p~~~~~~---~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
..+++... .+.+++.++++|... .. ..+.|+||+.||.... ..+|....+.|++.||+|..++..|+..-+..
T Consensus 39 ~~i~~~~~~r~~~~~v~~~~p~~~-~~~~~~~~~PlvvlshG~Gs~--~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~ 115 (365)
T COG4188 39 VTITLNDPQRDRERPVDLRLPQGG-TGTVALYLLPLVVLSHGSGSY--VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAP 115 (365)
T ss_pred EEEeccCcccCCccccceeccCCC-ccccccCcCCeEEecCCCCCC--ccchhhhHHHHhhCceEEEeccCCCcccccCC
Confidence 33444333 255778888887764 11 1479999999996544 44577777899999999999999997654333
Q ss_pred HHHccccc----CCcchHHHHHHHHHHHHHc---C----CCCCCcEEEEeeChHHHHHHHHHhhCCC
Q 010654 310 WYENGKFL----KKKNTFTDFIACAEYLIKN---C----YCTKEKLCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 310 ~~~~~~~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~rv~i~G~S~GG~~~~~~~~~~p~ 365 (505)
-...+... ..-.-..|+...+++|.+. + -+|+.||++.|||+|||.++.+++.+.+
T Consensus 116 ~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 116 AAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 22222111 1113356777777777766 4 4789999999999999999999876654
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.6e-09 Score=108.00 Aligned_cols=128 Identities=15% Similarity=0.139 Sum_probs=82.7
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccc-cc-CCc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FL-KKK 320 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~-~~-~~~ 320 (505)
-+...|+.|... ....++|++|++|||.-..... ........+++++.+|+.+|||-+- +| |..... .. .+.
T Consensus 108 CL~LnI~~P~~~-~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~gN 183 (535)
T PF00135_consen 108 CLYLNIYTPSNA-SSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSGN 183 (535)
T ss_dssp --EEEEEEETSS-SSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBST
T ss_pred HHHHhhhhcccc-ccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cc--cccccccccCchh
Confidence 466678899887 4444899999999985433222 1222234567889999999999532 11 111111 11 255
Q ss_pred chHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCc
Q 010654 321 NTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPF 376 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~ 376 (505)
..+.|...|++|+.++ -.-||++|.|+|+|+||..+...+..- ..+|+.+|+.+|.
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 7899999999999886 236999999999999999988877652 2489999999883
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.7e-08 Score=94.30 Aligned_cols=144 Identities=21% Similarity=0.251 Sum_probs=103.5
Q ss_pred CCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc----hhHHHHHHCCcEEEEEccc
Q 010654 226 FDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIR 301 (505)
Q Consensus 226 ~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~d~r 301 (505)
+....+..|...+.+.||.-+ ..--.|... ++.|+|++.||-..++..+.-+ ...-.|+++||-|..-|.|
T Consensus 41 i~~~gy~~E~h~V~T~DgYiL-~lhRIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R 115 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTEDGYIL-TLHRIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR 115 (403)
T ss_pred HHHcCCceEEEEEEccCCeEE-EEeeecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc
Confidence 344578899999999999833 333445432 7889999999976665443222 1223678899999999999
Q ss_pred CCCCCchhHHHcccc--------cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEE
Q 010654 302 GGGELGRQWYENGKF--------LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAA 370 (505)
Q Consensus 302 G~~~~g~~~~~~~~~--------~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~ 370 (505)
| ..|.++....... .+.+-...|+.+.++++.+.- ..+++..+|||.|+.....++..+|+ .++.+
T Consensus 116 G-n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~ 192 (403)
T KOG2624|consen 116 G-NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSF 192 (403)
T ss_pred C-cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhhee
Confidence 9 5565554322211 122346789999999998763 45899999999999988888887776 57777
Q ss_pred EecCCch
Q 010654 371 VAAVPFV 377 (505)
Q Consensus 371 v~~~~~~ 377 (505)
++.+|+.
T Consensus 193 ~aLAP~~ 199 (403)
T KOG2624|consen 193 IALAPAA 199 (403)
T ss_pred eeecchh
Confidence 8877765
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.1e-08 Score=93.14 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchh-HHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSS-RLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~-~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|++|++||..+... ..|... ...+.+ .+|.|+.+|+++..... +..+. ..-....+++...+++|.+...
T Consensus 34 ~~~p~vilIHG~~~~~~-~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~--~~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSGE-ESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAV--NNTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCCC-CcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHH--HhHHHHHHHHHHHHHHHHHhcC
Confidence 45689999999766542 233322 333444 68999999999763221 11110 0011223577778888887755
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.+++.++|||+||.++..++.+.|++++.++...|..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 677899999999999999999999999999999887754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.8e-07 Score=84.62 Aligned_cols=113 Identities=18% Similarity=0.203 Sum_probs=75.3
Q ss_pred CCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC--------------chhHHHcc--cccCC---
Q 010654 259 LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL--------------GRQWYENG--KFLKK--- 319 (505)
Q Consensus 259 ~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~--------------g~~~~~~~--~~~~~--- 319 (505)
+++++|+||+-||-.+++. -|+.....||++||+|+++..|-...- -..|...- .....
T Consensus 114 k~~k~PvvvFSHGLggsRt--~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSRT--LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCccEEEEecccccchh--hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 3678999999999766543 366667899999999999999976521 11221100 00000
Q ss_pred ---c---chHHHHHHHHHHHHH---------------------cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 320 ---K---NTFTDFIACAEYLIK---------------------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 320 ---~---~~~~D~~~~~~~l~~---------------------~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
+ .-..++..|+.-|.+ ++.+|..+++|+|||+||..+++..+.+. .|+|+|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeee
Confidence 0 123455555554433 23477889999999999999998888654 7888887
Q ss_pred cC
Q 010654 373 AV 374 (505)
Q Consensus 373 ~~ 374 (505)
.-
T Consensus 271 lD 272 (399)
T KOG3847|consen 271 LD 272 (399)
T ss_pred ee
Confidence 53
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.5e-07 Score=85.88 Aligned_cols=194 Identities=13% Similarity=0.035 Sum_probs=113.0
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC----CcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR----GFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
+....+++|+++ .+..++|++++.||-...+...- ......|++. .-+++.+|+--......++ ....
T Consensus 81 ~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~g~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~------~~n~ 152 (299)
T COG2382 81 ERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRSGRI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREEL------HCNE 152 (299)
T ss_pred ceeEEEEeCCCC-CccccccEEEEeccHHHHhcCCh-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHHh------cccH
Confidence 344567899998 77889999999998543222211 1123345554 4467777763211111111 1111
Q ss_pred chHHHHHH-HHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccc
Q 010654 321 NTFTDFIA-CAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 397 (505)
Q Consensus 321 ~~~~D~~~-~~~~l~~~~--~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 397 (505)
.....+.. .+=++.+.- .-++++-+++|.|+||..+++++.++|++|..+++.+|.+++.-. + .. .+
T Consensus 153 ~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~--~-~~-------~~ 222 (299)
T COG2382 153 AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPL--D-TQ-------PQ 222 (299)
T ss_pred HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCcc--c-cc-------cc
Confidence 12222222 223333331 245567779999999999999999999999999999998775321 1 10 00
Q ss_pred cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 398 WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 398 ~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
. +....+ +-.+.+.+... -++...++.+... ...+++++.|++.|.++.+-.|+ | ||-.
T Consensus 223 ~------~~~~~l---~~~~a~~~~~~-~~l~~g~~~~~~~--~pNr~L~~~L~~~g~~~~yre~~---G-gHdw 281 (299)
T COG2382 223 G------EVAESL---KILHAIGTDER-IVLTTGGEEGDFL--RPNRALAAQLEKKGIPYYYREYP---G-GHDW 281 (299)
T ss_pred c------chhhhh---hhhhccCccce-EEeecCCcccccc--chhHHHHHHHHhcCCcceeeecC---C-CCch
Confidence 0 001111 11222222223 3666666666666 45678999999999998777776 5 8943
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.7e-07 Score=81.71 Aligned_cols=214 Identities=16% Similarity=0.150 Sum_probs=122.3
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.+.|.++.+||-.++.. .|......|+.. |--|+.+|.|-+|.+... .........+|+...++........
T Consensus 50 ~~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred CCCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCccc-----cccCHHHHHHHHHHHHHHccccccc
Confidence 56899999999887653 355555566554 778999999977754321 1222334556666666665543233
Q ss_pred CCCcEEEEeeChHH-HHHHHHHhhCCCceeEEEe--cCCc-h--------hhhhhcc--CCCC---CC------------
Q 010654 340 TKEKLCIEGRSAGG-LLIGAVLNMRPDLFKAAVA--AVPF-V--------DVLTTML--DPTI---PL------------ 390 (505)
Q Consensus 340 d~~rv~i~G~S~GG-~~~~~~~~~~p~~~~a~v~--~~~~-~--------d~~~~~~--~~~~---~~------------ 390 (505)
.++.|.|||||| -+++......|++..-++. .+|. . .....+. +... +.
T Consensus 123 --~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 123 --DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred --CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 468899999999 6666666667876544332 2331 0 0111110 0010 00
Q ss_pred ---Ccccc-------------ccc-CCC-CCHHHHHHHHhCChhhcc--cCCCCCeEEEEccCCCCCCCCChHHHHHHHH
Q 010654 391 ---TTAEW-------------EEW-GDP-WKEEFYFYMKSYSPVDNV--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKL 450 (505)
Q Consensus 391 ---~~~~~-------------~~~-g~~-~~~~~~~~~~~~sp~~~~--~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L 450 (505)
....| ..| ++. .-.+.+..+...++-... .....| +|+++|.++..||.++-.++.+.+
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~p-vlfi~g~~S~fv~~~~~~~~~~~f 279 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGP-VLFIKGLQSKFVPDEHYPRMEKIF 279 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccc-eeEEecCCCCCcChhHHHHHHHhc
Confidence 00000 000 011 011222222122322222 444676 999999999999988777776655
Q ss_pred HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 451 REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.. +++..++ ++||+...+.++.+.. .+..|+.++
T Consensus 280 p~----~e~~~ld---~aGHwVh~E~P~~~~~--~i~~Fl~~~ 313 (315)
T KOG2382|consen 280 PN----VEVHELD---EAGHWVHLEKPEEFIE--SISEFLEEP 313 (315)
T ss_pred cc----hheeecc---cCCceeecCCHHHHHH--HHHHHhccc
Confidence 44 6777887 7899988777776544 356687654
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.5e-07 Score=82.06 Aligned_cols=117 Identities=19% Similarity=0.225 Sum_probs=86.2
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT 324 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 324 (505)
..+..++.|... +.+|+|++.||..-. ...|....+.+++.||+|+.|+.-.. ....+..+++
T Consensus 32 PkpLlI~tP~~~----G~yPVilF~HG~~l~--ns~Ys~lL~HIASHGfIVVAPQl~~~-----------~~p~~~~Ei~ 94 (307)
T PF07224_consen 32 PKPLLIVTPSEA----GTYPVILFLHGFNLY--NSFYSQLLAHIASHGFIVVAPQLYTL-----------FPPDGQDEIK 94 (307)
T ss_pred CCCeEEecCCcC----CCccEEEEeechhhh--hHHHHHHHHHHhhcCeEEEechhhcc-----------cCCCchHHHH
Confidence 566777777654 889999999997533 33355566788999999999987532 1244557789
Q ss_pred HHHHHHHHHHHc--------CCCCCCcEEEEeeChHHHHHHHHHhhCC-C-ceeEEEecCCchh
Q 010654 325 DFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRP-D-LFKAAVAAVPFVD 378 (505)
Q Consensus 325 D~~~~~~~l~~~--------~~~d~~rv~i~G~S~GG~~~~~~~~~~p-~-~~~a~v~~~~~~d 378 (505)
+..++++||.+. -..+.++++++|||.||..+.++|..+. + .|.+.|..-|+.-
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 999999999763 1256689999999999999988887652 2 3677777776543
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=98.61 E-value=9.9e-07 Score=88.60 Aligned_cols=87 Identities=16% Similarity=0.083 Sum_probs=61.1
Q ss_pred hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc-hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH---
Q 010654 283 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN-TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA--- 358 (505)
Q Consensus 283 ~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~--- 358 (505)
...++|.++||.|++++.|.-+...+ .++-. -++.+.+|++.+.+. ...++|-++|+|+||.+++.
T Consensus 238 SlVr~lv~qG~~VflIsW~nP~~~~r--------~~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~~a 307 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRNPDKAHR--------EWGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAALVG 307 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCCCChhhc--------CCCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHHHH
Confidence 35689999999999999987543221 12111 124566777777665 23478999999999999886
Q ss_pred -HHhhCCC-ceeEEEecCCchhh
Q 010654 359 -VLNMRPD-LFKAAVAAVPFVDV 379 (505)
Q Consensus 359 -~~~~~p~-~~~a~v~~~~~~d~ 379 (505)
+++.+++ +++.++.....+|+
T Consensus 308 ~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 308 HLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHhcCCCCceeeEEeeeccccc
Confidence 6677775 78888876665553
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=9.9e-07 Score=76.06 Aligned_cols=115 Identities=22% Similarity=0.190 Sum_probs=81.0
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~ 417 (505)
.++++||+|.|.|+||.+++.++..++-...+.+...++..-... +.|..+ |-.
T Consensus 89 Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------------~~~~~~----------~~~ 142 (206)
T KOG2112|consen 89 GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------------GLPGWL----------PGV 142 (206)
T ss_pred CCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------------hccCCc----------ccc
Confidence 478899999999999999999998876544444444443321100 001000 000
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+ .+ |++..||+.|+.||..-.++..+.|+..+..+++..|+ +-+|... .+ ++..+..|+.+
T Consensus 143 ~----~~-~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~---g~~h~~~---~~---e~~~~~~~~~~ 203 (206)
T KOG2112|consen 143 N----YT-PILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYP---GLGHSTS---PQ---ELDDLKSWIKT 203 (206)
T ss_pred C----cc-hhheecccCCceeehHHHHHHHHHHHHcCCceeeeecC---Ccccccc---HH---HHHHHHHHHHH
Confidence 0 34 59999999999999999999999999999998888887 8899643 22 33446778766
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.2e-07 Score=78.54 Aligned_cols=153 Identities=18% Similarity=0.210 Sum_probs=85.1
Q ss_pred EEEEcCCCCcCCCCCCchhH-HHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCc
Q 010654 266 LLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEK 343 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~r 343 (505)
|+.+||-.++.. ..|.... +.|... +.|-.+|.- .-..++ .+..|.+. ..+| +.
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~~-~~V~~~~~~------------------~P~~~~---W~~~l~~~i~~~~-~~ 56 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLENS-VRVEQPDWD------------------NPDLDE---WVQALDQAIDAID-EP 56 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTTS-EEEEEC--T------------------S--HHH---HHHHHHHCCHC-T-TT
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCCC-eEEeccccC------------------CCCHHH---HHHHHHHHHhhcC-CC
Confidence 567788655443 4455433 344444 666665531 112233 33344333 1234 45
Q ss_pred EEEEeeChHHHHHHHHH-hhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCC
Q 010654 344 LCIEGRSAGGLLIGAVL-NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ 422 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~-~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~ 422 (505)
+.++|||.|+.+++.++ .+....++++++.+|+..-.... ..+ ....+.. .|.. .+
T Consensus 57 ~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~---~~~----~~~~f~~-------------~p~~---~l 113 (171)
T PF06821_consen 57 TILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP---FPP----ELDGFTP-------------LPRD---PL 113 (171)
T ss_dssp EEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC---CTC----GGCCCTT-------------SHCC---HH
T ss_pred eEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc---hhh----hcccccc-------------Cccc---cc
Confidence 88999999999999998 76778999999999974310110 000 0011111 0111 11
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
..| .+++.+++|+.||+..+.+++++|.. +++.++ ++||....
T Consensus 114 ~~~-~~viaS~nDp~vp~~~a~~~A~~l~a-----~~~~~~---~~GHf~~~ 156 (171)
T PF06821_consen 114 PFP-SIVIASDNDPYVPFERAQRLAQRLGA-----ELIILG---GGGHFNAA 156 (171)
T ss_dssp HCC-EEEEEETTBSSS-HHHHHHHHHHHT------EEEEET---S-TTSSGG
T ss_pred CCC-eEEEEcCCCCccCHHHHHHHHHHcCC-----CeEECC---CCCCcccc
Confidence 344 58889999999999999999999854 467777 88997543
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.1e-06 Score=80.77 Aligned_cols=113 Identities=17% Similarity=0.141 Sum_probs=71.5
Q ss_pred CCCcEEEEEcCCCCcCCCC--------CCchhH----HHHHHCCcEEEEEcccCCC-CC-chhHHHcccc----cCCcch
Q 010654 261 GSDPLLLYGYGSYEICNDP--------AFNSSR----LSLLDRGFIFAIAQIRGGG-EL-GRQWYENGKF----LKKKNT 322 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~--------~~~~~~----~~l~~~G~~v~~~d~rG~~-~~-g~~~~~~~~~----~~~~~~ 322 (505)
.+..+||++|+-.+.+... +|-... +.+--.-|-|++.|.-|+. |. |..-....-+ ......
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 4567899999865533221 122110 1233334899999998876 32 2211111101 112367
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
+.|...+-+.|+++-.| ++++ |+|.||||..++..+..+||+...++..+.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 88999888888776445 4554 899999999999999999998777665544
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.9e-07 Score=77.40 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=110.6
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC-chhHHHcccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGKF 316 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~-g~~~~~~~~~ 316 (505)
+.-.+|..|..|-..|+.. ...+.|.||..-|.... ...|-....+|+.+||.|+.+|.--+-|. ...-. .
T Consensus 7 i~~~~~~~I~vwet~P~~~--~~~~~~tiliA~Gf~rr--mdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~----e 78 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNN--EPKRNNTILIAPGFARR--MDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN----E 78 (294)
T ss_dssp EEETTTEEEEEEEE---TT--S---S-EEEEE-TT-GG--GGGGHHHHHHHHTTT--EEEE---B---------------
T ss_pred eEcCCCCEEEEeccCCCCC--CcccCCeEEEecchhHH--HHHHHHHHHHHhhCCeEEEeccccccccCCCCChh----h
Confidence 3456899999997777753 45667888888664332 22355666799999999999996433221 01000 0
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc---CCC-CCCCc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPT-IPLTT 392 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~-~~~~~ 392 (505)
..-.....|+..+++||.++|. .++|++..|..|-++...++. ++ ..-.|...|+.|+...+. ..+ +....
T Consensus 79 ftms~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~~~i 153 (294)
T PF02273_consen 79 FTMSIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQLPI 153 (294)
T ss_dssp --HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGGS-G
T ss_pred cchHHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhhcch
Confidence 0111345889999999998875 679999999999999999984 54 566777779988755431 000 00000
Q ss_pred ccc---ccc-CCCCCHHHH--HHHH-h----CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 393 AEW---EEW-GDPWKEEFY--FYMK-S----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 393 ~~~---~~~-g~~~~~~~~--~~~~-~----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
... ..+ |..-+.+.+ +.+. . .|-...++.+.+| ++.+++.+|..|...+..++...+... .+++..
T Consensus 154 ~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP-~iaF~A~~D~WV~q~eV~~~~~~~~s~--~~klys 230 (294)
T PF02273_consen 154 EQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIP-FIAFTANDDDWVKQSEVEELLDNINSN--KCKLYS 230 (294)
T ss_dssp GG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S--EEEEEETT-TTS-HHHHHHHHTT-TT----EEEEE
T ss_pred hhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCC-EEEEEeCCCccccHHHHHHHHHhcCCC--ceeEEE
Confidence 000 001 111111111 0110 1 1345667888898 999999999999776666665544432 233344
Q ss_pred EEecCCCCCCCCCCh
Q 010654 462 FKCELGAGHFSKSGR 476 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~ 476 (505)
++ |..|-..++.
T Consensus 231 l~---Gs~HdL~enl 242 (294)
T PF02273_consen 231 LP---GSSHDLGENL 242 (294)
T ss_dssp ET---T-SS-TTSSH
T ss_pred ec---CccchhhhCh
Confidence 44 9999877654
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.4e-07 Score=81.78 Aligned_cols=117 Identities=19% Similarity=0.148 Sum_probs=79.3
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~ 310 (505)
..+.+.+...|+ .+..++..|+. ...|++++.|||..+..+ |......+..+ -..++++|.||+|+.--+-
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~~-----t~gpil~l~HG~G~S~LS--fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~ 120 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPSA-----TEGPILLLLHGGGSSALS--FAIFASELKSKIRCRCLALDLRGHGETKVEN 120 (343)
T ss_pred cccccccCCCcc-eEEEEEecCCC-----CCccEEEEeecCcccchh--HHHHHHHHHhhcceeEEEeeccccCccccCC
Confidence 345555555555 46666555542 457999999998766544 55556666664 6678999999999753322
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.. .........|+.+.++++-.. ++.+|.++||||||.++...+..
T Consensus 121 e~---dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 121 ED---DLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred hh---hcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 11 122335568888877777643 34679999999999999887764
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.9e-06 Score=66.81 Aligned_cols=165 Identities=19% Similarity=0.219 Sum_probs=96.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCC--CCchhHHHcccccCCcc-hHHHHHHHHHHHHHcCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKKN-TFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~ 339 (505)
.-+||+.||...+..++........|+.+|+.|+..++.--. ..|. . +...+.. .-...+.++..|....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~---r--kPp~~~~t~~~~~~~~~aql~~~l-- 86 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGR---R--KPPPGSGTLNPEYIVAIAQLRAGL-- 86 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccC---C--CCcCccccCCHHHHHHHHHHHhcc--
Confidence 346677899888877776666678999999999999864111 1110 0 0011111 1233344555565543
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec-CCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhc
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDN 418 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~ 418 (505)
+..++.|.|+||||-++..++..--..+.+.++. +|+. --|.|+.. -..+
T Consensus 87 ~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh-------------------ppGKPe~~----------Rt~H 137 (213)
T COG3571 87 AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH-------------------PPGKPEQL----------RTEH 137 (213)
T ss_pred cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC-------------------CCCCcccc----------hhhh
Confidence 4467999999999998877765321123333322 2211 01333221 1346
Q ss_pred ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 419 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 419 ~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
+..+++| +||.||+.|+.-.-.+. +.. ....+.+++++. ++.|-.
T Consensus 138 L~gl~tP-tli~qGtrD~fGtr~~V---a~y--~ls~~iev~wl~---~adHDL 182 (213)
T COG3571 138 LTGLKTP-TLITQGTRDEFGTRDEV---AGY--ALSDPIEVVWLE---DADHDL 182 (213)
T ss_pred ccCCCCC-eEEeecccccccCHHHH---Hhh--hcCCceEEEEec---cCcccc
Confidence 7788898 99999999987543333 222 223467778887 778854
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.4e-07 Score=87.84 Aligned_cols=112 Identities=8% Similarity=-0.014 Sum_probs=75.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHHHH--CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD--RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
...|++|++||.........|.. ....|.. ..|.|+++|.+|.+.... ..+. ..-...-.++.+.+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y--~~a~--~~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY--PTSA--AYTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC--cccc--ccHHHHHHHHHHHHHHHHHhh
Confidence 44689999999765432223443 2334443 369999999998764321 1110 011122356667777776553
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.++.+++.++|||+||.++..++...|+++..++...|.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 357789999999999999999999889999988887774
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.8e-06 Score=80.26 Aligned_cols=100 Identities=19% Similarity=0.142 Sum_probs=63.6
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
.|.|+++||++........ ....+... .|.|+.+|.||+|... . . ..........+..+.+.-..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~g~g~s~-~-------~--~~~~~~~~~~~~~~~~~~~~- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRP--VFKVLPALAARYRVIAPDLRGHGRSD-P-------A--GYSLSAYADDLAALLDALGL- 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHH--HHHHhhccccceEEEEecccCCCCCC-c-------c--cccHHHHHHHHHHHHHHhCC-
Confidence 4599999999865443322 11222221 1999999999888764 0 0 01111112223333332122
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.++.++|+|+||.++..++.++|+.++.++...+.
T Consensus 88 -~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 88 -EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred -CceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 34899999999999999999999999988887754
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.1e-06 Score=78.18 Aligned_cols=184 Identities=13% Similarity=0.108 Sum_probs=109.9
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEe-c---cccceEEEEEeCCCCCceeeeecc-cccee-EE
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIAS-E---SKITRFVFYLDVSKPEELRVLTPR-VVGVD-TA 82 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~-~---~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~-~~ 82 (505)
.||.|.|+++ +..+|.. +-.....+.+||||++|+|+. . +.+..+||+++.++|+ ++++|-- ..... ..
T Consensus 60 dlWe~slk~g--~~~ritS--~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge-~kRiTyfGr~fT~VaG 134 (668)
T COG4946 60 DLWEYSLKDG--KPLRITS--GLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGE-AKRITYFGRRFTRVAG 134 (668)
T ss_pred HHHHhhhccC--CeeEEec--ccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCc-EEEEEEeccccceeec
Confidence 4788889875 3455553 233445788999999999953 2 3357899999999997 8877622 11222 23
Q ss_pred eeeeCCEEEEEEcCCCC-CCceEEEeeCCCC-------------------------------------C--CceEEEcCC
Q 010654 83 ASHRGNHFFITRRSDEL-FNSELLACPVDNT-------------------------------------S--ETTVLIPHR 122 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~-~~~~l~~~~~~~~-------------------------------------~--~~~~~~~~~ 122 (505)
|+|||+-|+...-.... ....||.+.+++. | ..-|.-...
T Consensus 135 ~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkGGtrGklWis~d~ 214 (668)
T COG4946 135 WIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKGGTRGKLWISSDG 214 (668)
T ss_pred cCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccCCccceEEEEecC
Confidence 99999755544322211 1234555544331 0 112311111
Q ss_pred C---------CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEE
Q 010654 123 E---------SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 193 (505)
Q Consensus 123 ~---------~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (505)
. +..++.....+++++|....+|..+++..+++ |..++. ...|++ |.. -+.+.||++++|
T Consensus 215 g~tFeK~vdl~~~vS~PmIV~~RvYFlsD~eG~GnlYSvdld--GkDlrr-----HTnFtd--YY~--R~~nsDGkrIvF 283 (668)
T COG4946 215 GKTFEKFVDLDGNVSSPMIVGERVYFLSDHEGVGNLYSVDLD--GKDLRR-----HTNFTD--YYP--RNANSDGKRIVF 283 (668)
T ss_pred CcceeeeeecCCCcCCceEEcceEEEEecccCccceEEeccC--Cchhhh-----cCCchh--ccc--cccCCCCcEEEE
Confidence 1 11223344556889999999998888766665 554422 112222 222 244568999999
Q ss_pred EEecCCCCceEEEEECCCCc
Q 010654 194 HYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~ 213 (505)
... ..||++|+.+.+
T Consensus 284 q~~-----GdIylydP~td~ 298 (668)
T COG4946 284 QNA-----GDIYLYDPETDS 298 (668)
T ss_pred ecC-----CcEEEeCCCcCc
Confidence 865 679999988766
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.3e-06 Score=83.45 Aligned_cols=236 Identities=16% Similarity=0.114 Sum_probs=122.2
Q ss_pred ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 244 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 244 ~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
..+.+.+..|+.. ...++.|.++..||.......... ....+++.++.++..+....++.+...+...... ...
T Consensus 31 ~~~~~~l~~p~~~-~~~~~~p~v~~~h~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~ 104 (299)
T COG1073 31 IALAAVLHLPPSG-NEEKKLPAVVFLHGFGSSKEQSLG--YAVLLAEKGYRVLAGDASLFGESGGDPRGLADSE---GYA 104 (299)
T ss_pred ceeeeEEEecCCC-CccccCceEEeccCccccccCcch--HHHHhhhceeEEeeeccccccccccccccccCcc---ccc
Confidence 5677888888876 444689999999997654433221 4567888899888776522111111100000000 000
Q ss_pred HHHHH---------HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCC-----chh--------
Q 010654 324 TDFIA---------CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVP-----FVD-------- 378 (505)
Q Consensus 324 ~D~~~---------~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~-----~~d-------- 378 (505)
.++.. .+..-.........+....|.+.|+..+..++...+ +..+.++...+ ...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~ 184 (299)
T COG1073 105 EDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPEL 184 (299)
T ss_pred cccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHH
Confidence 00000 000000001112256777788877777666665544 12111111111 000
Q ss_pred ---hhhhccCCCCCCCcc--cccccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHh
Q 010654 379 ---VLTTMLDPTIPLTTA--EWEEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLRE 452 (505)
Q Consensus 379 ---~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~ 452 (505)
....+.. ....... ....+..+... ...+...++...+.++. .| +|++||..|..||..++..++.+.+.
T Consensus 185 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~i~~~P-~l~~~G~~D~~vp~~~~~~~~~~~~~ 260 (299)
T COG1073 185 ARELIDYLIT-PGGFAPLPAPEAPLDTLPLR--AVLLLLLDPFDDAEKISPRP-VLLVHGERDEVVPLRDAEDLYEAARE 260 (299)
T ss_pred HHhhhhhhcc-CCCCCCCCcccccccccccc--hhhhccCcchhhHhhcCCcc-eEEEecCCCcccchhhhHHHHhhhcc
Confidence 0000000 0000000 00001111111 11235567777777776 67 99999999999999999999999887
Q ss_pred cCCCCCeEEEEecCCCCCCCCC-ChHHHHHHHHHHHHHHHHhh
Q 010654 453 MKTDDNILLFKCELGAGHFSKS-GRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 453 ~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l 494 (505)
. +.+.+.++ +.+|.... ...........+.+||.+++
T Consensus 261 ~--~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 261 R--PKKLLFVP---GGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred C--CceEEEec---CCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 6 55667777 66786543 22332344556889998876
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.3e-05 Score=75.41 Aligned_cols=123 Identities=15% Similarity=0.075 Sum_probs=77.4
Q ss_pred EEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH-------cccccCCc
Q 010654 248 ICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE-------NGKFLKKK 320 (505)
Q Consensus 248 ~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~-------~~~~~~~~ 320 (505)
..++.|+.. + ..+.|++|++.|................|++.|++.+....+-.|..-.+-.. ......+.
T Consensus 79 ~~~~~P~~~-~-~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 79 FQLLLPKRW-D-SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred EEEEECCcc-c-cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 344667653 1 24579999988754322111112224567778998888876544332111100 00111223
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
..+.+....+.|+.++|+ .++||.|.||||+++..+++..|....++-+.++
T Consensus 157 ~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 157 ATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 567788889999999976 5999999999999999999988886555544433
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-05 Score=78.58 Aligned_cols=199 Identities=15% Similarity=0.206 Sum_probs=117.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCc--------------e--EEEEEEeCCCcEEEEEeccc----------------
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDI--------------Y--SLGLQASESKKFLFIASESK---------------- 53 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~--------------~--~~~~~~SpDg~~i~~~~~~~---------------- 53 (505)
|...||+.++.++ +.+.|.....+. + ....-|||||++|+|..-+.
T Consensus 61 ~~~nly~~~~~~~--~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~ 138 (353)
T PF00930_consen 61 RDNNLYLRDLATG--QETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS 138 (353)
T ss_dssp ETTEEEEESSTTS--EEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE
T ss_pred ecCceEEEECCCC--CeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc
Confidence 4567999998765 344444321111 1 12356999999999986320
Q ss_pred -----------------cceEEEEEeCCCCCceeeeecc-----cccee--EEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 54 -----------------ITRFVFYLDVSKPEELRVLTPR-----VVGVD--TAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 54 -----------------~~~~l~~~d~~~~~~~~~l~~~-----~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
...+|+++|+++++ ...+... .+... ..|++|+++|++...........|+++|.
T Consensus 139 ~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~-~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~ 217 (353)
T PF00930_consen 139 QYPEVESIRYPKAGDPNPRVSLFVVDLASGK-TTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDA 217 (353)
T ss_dssp SS-EEEEEE--BTTS---EEEEEEEESSSTC-CCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEE
T ss_pred cCCcccccccCCCCCcCCceEEEEEECCCCc-EEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEEC
Confidence 03479999999886 4333322 11111 23999999676665432345578899998
Q ss_pred CCCCCceEEEcCCCCcee---eEEEEe---CCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeec-CC
Q 010654 110 DNTSETTVLIPHRESVKL---QDIQLF---IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID-PS 182 (505)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i---~~~~~~---~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~ 182 (505)
++ +..++++.+..+..+ ..+.+. ++.+++...++|..+|++++.+ ++.+++|+.|. +.+. ..
T Consensus 218 ~t-g~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~--~~~~~~lT~G~--------~~V~~i~ 286 (353)
T PF00930_consen 218 ST-GETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLD--GGKPRQLTSGD--------WEVTSIL 286 (353)
T ss_dssp CT-TTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETT--SSEEEESS-SS--------S-EEEEE
T ss_pred CC-CceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccc--ccceeccccCc--------eeecccc
Confidence 76 555554433322222 234433 4577777779999999999876 44455555432 2221 12
Q ss_pred CCcccCCEEEEEEecCCCCc--eEEEEECC-CCcEEEEEEee
Q 010654 183 ESVFSSRILRFHYSSLRTPP--SVYDYDMD-MGISVLKKIET 221 (505)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~p~--~~~~~~~~-~~~~~~~~~~~ 221 (505)
.++.+++.++|+++... |. .||+++++ +++ ++.++.
T Consensus 287 ~~d~~~~~iyf~a~~~~-p~~r~lY~v~~~~~~~--~~~LT~ 325 (353)
T PF00930_consen 287 GWDEDNNRIYFTANGDN-PGERHLYRVSLDSGGE--PKCLTC 325 (353)
T ss_dssp EEECTSSEEEEEESSGG-TTSBEEEEEETTETTE--EEESST
T ss_pred eEcCCCCEEEEEecCCC-CCceEEEEEEeCCCCC--eEeccC
Confidence 34667888988888733 43 79999998 665 444443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.8e-06 Score=73.86 Aligned_cols=202 Identities=19% Similarity=0.172 Sum_probs=106.9
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC-C
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY-C 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~ 339 (505)
.+.-++.+.|-|.++.. |......|.. -+.++.+.++|.+.. .+.....|+.+.++.+...-. .
T Consensus 6 ~~~~L~cfP~AGGsa~~---fr~W~~~lp~-~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el~~~ 70 (244)
T COG3208 6 ARLRLFCFPHAGGSASL---FRSWSRRLPA-DIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANELLPP 70 (244)
T ss_pred CCceEEEecCCCCCHHH---HHHHHhhCCc-hhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHhccc
Confidence 44456666676654432 2222222221 378999999987642 112334566666666655422 1
Q ss_pred CC-CcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchhhhhhccCCCCCCCcccc----ccc-CCC----CC
Q 010654 340 TK-EKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW----EEW-GDP----WK 403 (505)
Q Consensus 340 d~-~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~----~~~-g~~----~~ 403 (505)
.+ ...+++||||||.++.-++.+. |.-+-...+.+|..+-... ........+ .++ |.| +|
T Consensus 71 ~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~----i~~~~D~~~l~~l~~lgG~p~e~led 146 (244)
T COG3208 71 LLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQ----IHHLDDADFLADLVDLGGTPPELLED 146 (244)
T ss_pred cCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCC----ccCCCHHHHHHHHHHhCCCChHHhcC
Confidence 22 4699999999999988877542 2222223333442221111 111112222 122 444 35
Q ss_pred HHHHHHHH--------hCChhhc--ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 404 EEFYFYMK--------SYSPVDN--VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 404 ~~~~~~~~--------~~sp~~~--~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
++....+. ...-+.+ -..+.+| +.++.|++|..|...+...+.+. .+...++.+|+ +||++.
T Consensus 147 ~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~p-i~~~~G~~D~~vs~~~~~~W~~~---t~~~f~l~~fd----GgHFfl 218 (244)
T COG3208 147 PELMALFLPILRADFRALESYRYPPPAPLACP-IHAFGGEKDHEVSRDELGAWREH---TKGDFTLRVFD----GGHFFL 218 (244)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCcCcc-eEEeccCcchhccHHHHHHHHHh---hcCCceEEEec----Ccceeh
Confidence 55443322 0111111 1345787 99999999999966554444333 34478888996 589875
Q ss_pred CChHHHHHHHHHHHHHHHHhhC
Q 010654 474 SGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 474 ~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.... ..+++++.++++
T Consensus 219 ~~~~------~~v~~~i~~~l~ 234 (244)
T COG3208 219 NQQR------EEVLARLEQHLA 234 (244)
T ss_pred hhhH------HHHHHHHHHHhh
Confidence 3221 235667776664
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-06 Score=79.49 Aligned_cols=170 Identities=18% Similarity=0.149 Sum_probs=77.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCch----hHHHHHHCCcEEEEEcccCCC----CCchh-------HH-HcccccCCc-----
Q 010654 262 SDPLLLYGYGSYEICNDPAFNS----SRLSLLDRGFIFAIAQIRGGG----ELGRQ-------WY-ENGKFLKKK----- 320 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~----~~~~l~~~G~~v~~~d~rG~~----~~g~~-------~~-~~~~~~~~~----- 320 (505)
+.+-||++||...+.. -|.. ....|.+.++-.+.+|-+-.- +.... .. ......|..
T Consensus 3 ~k~riLcLHG~~~na~--if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE--IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HH--HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHH--HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 4688999999765422 1222 223443337888888753211 11000 10 111122221
Q ss_pred chHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCchhhhhhccCCCC
Q 010654 321 NTFTDFIACAEYLIK----NCYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
....++..++++|.+ +|- =.||+|+|.||.+++.++... ...|+.+|..+|+.-....
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------ 150 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------ 150 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------
T ss_pred ccccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------
Confidence 234555555555544 342 368999999999988877531 1257888888775431110
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
+ .......++++| +|.++|.+|..++++.++++++..... .+ ++.. .+
T Consensus 151 ------~------------------~~~~~~~~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~~---~~--v~~h--~g 198 (212)
T PF03959_consen 151 ------Y------------------QELYDEPKISIP-TLHVIGENDPVVPPERSEALAEMFDPD---AR--VIEH--DG 198 (212)
T ss_dssp ------G------------------TTTT--TT---E-EEEEEETT-SSS-HHHHHHHHHHHHHH---EE--EEEE--SS
T ss_pred ------h------------------hhhhccccCCCC-eEEEEeCCCCCcchHHHHHHHHhccCC---cE--EEEE--CC
Confidence 0 000012344676 999999999999999999999998875 22 3332 57
Q ss_pred CCCCCCC
Q 010654 469 GHFSKSG 475 (505)
Q Consensus 469 gH~~~~~ 475 (505)
||..+..
T Consensus 199 GH~vP~~ 205 (212)
T PF03959_consen 199 GHHVPRK 205 (212)
T ss_dssp SSS----
T ss_pred CCcCcCC
Confidence 9987643
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.9e-06 Score=76.46 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=92.5
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
++.++++.||.+|...++--... ..+...-+|++.-|..+- ..-+ ....=++.||.|+-.|.+|-+|+-.-
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n-~~~ngq~LvIC~EGNAGF-YEvG---~m~tP~~lgYsvLGwNhPGFagSTG~---- 285 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPN-QSGNGQDLVICFEGNAGF-YEVG---VMNTPAQLGYSVLGWNHPGFAGSTGL---- 285 (517)
T ss_pred eEEEEeecCCcchhheeecCCCC-CCCCCceEEEEecCCccc-eEee---eecChHHhCceeeccCCCCccccCCC----
Confidence 56677889999998765443322 122224566666653321 0000 01223577999999999987765221
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 381 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 381 (505)
....++...+.+++++.+..-...++.|.++|||-||+.++|+|..+|| ++|+|..+.+-|++.
T Consensus 286 ---P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllp 349 (517)
T KOG1553|consen 286 ---PYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLP 349 (517)
T ss_pred ---CCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhh
Confidence 2233556667778888888755667899999999999999999999996 599999998877653
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.7e-05 Score=74.41 Aligned_cols=193 Identities=16% Similarity=0.073 Sum_probs=94.5
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee--EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
-+..|++||++++|.+......++|++|+++++ .++||....... ..++++++.++|..+. ..|.++|+++
T Consensus 39 ~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~-i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-----~~l~~vdL~T- 111 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDGNRNLYLLDLATGE-ITQLTDGPGDNTFGGFLSPDDRALYYVKNG-----RSLRRVDLDT- 111 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTSS-EEEEEETTT-E-EEE---SS-B-TTT-EE-TTSSEEEEEETT-----TEEEEEETTT-
T ss_pred cCCCcCCCCCEEEEEeccCCCcceEEEEcccCE-EEECccCCCCCccceEEecCCCeEEEEECC-----CeEEEEECCc-
Confidence 356899999999998887778999999999996 999997652222 3489999999888743 3899999988
Q ss_pred CCceEEEcCCCCceeeEEEEe--CC--EEEEEEec-------------------CCeeEEEEEEcCCCCCcccccCCCce
Q 010654 113 SETTVLIPHRESVKLQDIQLF--ID--HLAVYERE-------------------GGLQKITTYRLPAVGEPLKSLQGGKS 169 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~--~d--~l~~~~~~-------------------~~~~~l~~~~~~~~~~~~~~l~~~~~ 169 (505)
.+++ ++..-++...+...|. .| .++.+... +-..++..+++. ++..+.
T Consensus 112 ~e~~-~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~--tG~~~~------ 182 (386)
T PF14583_consen 112 LEER-VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLK--TGERKV------ 182 (386)
T ss_dssp --EE-EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETT--T--EEE------
T ss_pred CcEE-EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECC--CCceeE------
Confidence 4444 2222223233333442 22 33333222 112344455554 332221
Q ss_pred eeccCCeeeecCCCCcc-cCCEEEEEEecCCCC--ceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEECCCCcee
Q 010654 170 VEFIDPVYSIDPSESVF-SSRILRFHYSSLRTP--PSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQI 246 (505)
Q Consensus 170 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i 246 (505)
-+.+..+ +..+.++| |...+.|-.+++-+- .+||.++..+.. ..++.+. .....--..|-++||..|
T Consensus 183 -v~~~~~w-lgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~--~~~v~~~------~~~e~~gHEfw~~DG~~i 252 (386)
T PF14583_consen 183 -VFEDTDW-LGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN--VKKVHRR------MEGESVGHEFWVPDGSTI 252 (386)
T ss_dssp -EEEESS--EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS-----EESS---------TTEEEEEEEE-TTSS-E
T ss_pred -EEecCcc-ccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc--ceeeecC------CCCcccccccccCCCCEE
Confidence 1111211 11122344 456777888887765 489999976554 2222211 123444455677899988
Q ss_pred eEEEEEeC
Q 010654 247 PICIVYRK 254 (505)
Q Consensus 247 ~~~l~~p~ 254 (505)
-. ..+.+
T Consensus 253 ~y-~~~~~ 259 (386)
T PF14583_consen 253 WY-DSYTP 259 (386)
T ss_dssp EE-EEEET
T ss_pred EE-EeecC
Confidence 44 34433
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.8e-05 Score=74.48 Aligned_cols=120 Identities=22% Similarity=0.287 Sum_probs=76.5
Q ss_pred EEEEE-eCCccCCCCCCcEEEEEcCCCCcCCCCCCch----hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcch
Q 010654 248 ICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAFNS----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 322 (505)
Q Consensus 248 ~~l~~-p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~----~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~ 322 (505)
.|++. |... + .+..|+|+|+|||.-......... ....+.. ..++++.||.-...- ..+...+.+
T Consensus 108 ~Wlvk~P~~~-~-pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~-------~~~~~yPtQ 177 (374)
T PF10340_consen 108 YWLVKAPNRF-K-PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSD-------EHGHKYPTQ 177 (374)
T ss_pred EEEEeCCccc-C-CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccc-------cCCCcCchH
Confidence 46666 5543 2 234699999999853221111111 1112223 559999999755410 012344577
Q ss_pred HHHHHHHHHHHH-HcCCCCCCcEEEEeeChHHHHHHHHHhh--CC---CceeEEEecCCchhhh
Q 010654 323 FTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLIGAVLNM--RP---DLFKAAVAAVPFVDVL 380 (505)
Q Consensus 323 ~~D~~~~~~~l~-~~~~~d~~rv~i~G~S~GG~~~~~~~~~--~p---~~~~a~v~~~~~~d~~ 380 (505)
+.++.+..++|+ +.|. ++|.++|.|+||.+++.++.. ++ -.-+.+|+.+|=+++.
T Consensus 178 L~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 899999999999 5554 689999999999999887643 11 1347899999876654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00013 Score=70.40 Aligned_cols=154 Identities=16% Similarity=0.132 Sum_probs=103.7
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec-CCchhhhhhcc------CCCCCCCcccccccCC---C
Q 010654 332 YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDVLTTML------DPTIPLTTAEWEEWGD---P 401 (505)
Q Consensus 332 ~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~------~~~~~~~~~~~~~~g~---~ 401 (505)
++.+...++.++..|.|.|=-|+.+..+++ .+.|++|++.. .++.|+...+. +..-+.....|...|- -
T Consensus 162 ~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 162 FLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQL 240 (367)
T ss_pred HHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhc
Confidence 334444567799999999999999988888 45688877754 45555433221 1011111112211121 1
Q ss_pred CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHH
Q 010654 402 WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLR 481 (505)
Q Consensus 402 ~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 481 (505)
..++..+.+.-.+|+.+.++++.| -||+.|..|+...+..+.-++..|.. +..+.++| +.+|+... ..
T Consensus 241 ~tp~f~~L~~ivDP~~Y~~rL~~P-K~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vP---N~~H~~~~--~~--- 308 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPYSYRDRLTMP-KYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVP---NAGHSLIG--SD--- 308 (367)
T ss_pred CCHHHHHHHHhcCHHHHHHhcCcc-EEEEecCCCceeccCchHHHHhhCCC---CeeEEeCC---CCCcccch--HH---
Confidence 345555566778999999999998 99999999999999999999999985 33456676 89997643 22
Q ss_pred HHHHHHHHHHHhhCCCC
Q 010654 482 EAAFTYTFLMRALSMLP 498 (505)
Q Consensus 482 ~~~~~~~fl~~~l~~~~ 498 (505)
....+..|+.+.+...+
T Consensus 309 ~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 309 VVQSLRAFYNRIQNGRP 325 (367)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 23347889988765443
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.8e-06 Score=87.46 Aligned_cols=99 Identities=13% Similarity=0.056 Sum_probs=68.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc----------cc---------ccCCcch
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN----------GK---------FLKKKNT 322 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~----------~~---------~~~~~~~ 322 (505)
..|+||++||..+... .|......|+++||.|+.+|+||+|.....-... ++ +....+.
T Consensus 448 g~P~VVllHG~~g~~~--~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE--NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCHH--HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 4689999999765433 3555667888899999999999998763220000 00 1122356
Q ss_pred HHHHHHHHHHHH------Hc----CCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLI------KN----CYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~------~~----~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
+.|+......+. +. +-.+..+|.++|||+||.++..++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 778777777665 11 12456799999999999999888875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=3e-05 Score=70.16 Aligned_cols=54 Identities=24% Similarity=0.245 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 324 TDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 324 ~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
+.+..-+.=.++. --+|++|.+|+|||+||.+++.++..+|+.|....+.+|-+
T Consensus 118 ~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 118 EFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3344444433443 55889999999999999999999999999999999999843
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00011 Score=70.26 Aligned_cols=108 Identities=8% Similarity=0.083 Sum_probs=63.5
Q ss_pred CCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEecc-cc--ceEEEEEeCCCCCceeeeeccccce
Q 010654 4 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASES-KI--TRFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 4 ~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~-~~--~~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
+.-+++|+..++.|+ +.+.|++++ .|.--+..|| |...|.|.... ++ ..+||.+|.+++. .+++.++..+.
T Consensus 164 a~p~~~i~~idl~tG--~~~~v~~~~--~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~-~~~v~~~~~~e 238 (386)
T PF14583_consen 164 ARPHCRIFTIDLKTG--ERKVVFEDT--DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN-VKKVHRRMEGE 238 (386)
T ss_dssp C---EEEEEEETTT----EEEEEEES--S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---TTE
T ss_pred hCCCceEEEEECCCC--ceeEEEecC--ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc-ceeeecCCCCc
Confidence 445788999999886 567788764 3666677777 66667776543 33 3589999999886 77776655443
Q ss_pred eE---EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE
Q 010654 80 DT---AASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 117 (505)
Q Consensus 80 ~~---~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 117 (505)
.. +|+|||+.|+|.+...+....-|+.+++++ ++.++
T Consensus 239 ~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t-~~~~~ 278 (386)
T PF14583_consen 239 SVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDT-GERRR 278 (386)
T ss_dssp EEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT---EEE
T ss_pred ccccccccCCCCEEEEEeecCCCCceEEEeeCCCC-CCceE
Confidence 32 299999999998765444456788889886 44443
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.8e-05 Score=69.38 Aligned_cols=212 Identities=17% Similarity=0.126 Sum_probs=112.1
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHH-HCCc--E--EEEEcccCCCCCchhHHHcc-------cccCCc-----chHHHH
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLL-DRGF--I--FAIAQIRGGGELGRQWYENG-------KFLKKK-----NTFTDF 326 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~-~~G~--~--v~~~d~rG~~~~g~~~~~~~-------~~~~~~-----~~~~D~ 326 (505)
-..|++||..++.. .|....+.+. +.|. - ++.++.-|.-.+...+.... ...+.. ....=+
T Consensus 12 tPTifihG~~gt~~--s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 12 TPTIFIHGYGGTAN--SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp EEEEEE--TTGGCC--CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CcEEEECCCCCChh--HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 44677898766533 4677778886 5655 2 44444444333322222110 001111 244556
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCCCcccccccCCC
Q 010654 327 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 401 (505)
Q Consensus 327 ~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 401 (505)
..++.+|.++.-+ +++-++||||||..+..++..+.. .+...|..++-+|-...... .. .......-| |
T Consensus 90 ~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-~~--~~~~~~~~g-p 163 (255)
T PF06028_consen 90 KKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-DQ--NQNDLNKNG-P 163 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC--T--TTT-CSTT--B
T ss_pred HHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-cc--hhhhhcccC-C
Confidence 6788888887555 689999999999999888877422 34555555554443221110 00 000112224 5
Q ss_pred -CCHHHHHHHHhCChhhcccCCCCCeEEEEccC------CCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 402 -WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 402 -~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~------~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
...+.|..+.+.- -.+.++ .. .||-|.|. .|-.||...++.+..-++......+-..+... .+.|...-
T Consensus 164 ~~~~~~y~~l~~~~-~~~~p~-~i-~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~-~a~HS~Lh 239 (255)
T PF06028_consen 164 KSMTPMYQDLLKNR-RKNFPK-NI-QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK-DAQHSQLH 239 (255)
T ss_dssp SS--HHHHHHHHTH-GGGSTT-T--EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG-GGSCCGGG
T ss_pred cccCHHHHHHHHHH-HhhCCC-Ce-EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC-CCccccCC
Confidence 2333444444220 012221 33 49999998 89999999998888888877777777788743 45786432
Q ss_pred ChHHHHHHHHHHHHHH
Q 010654 475 GRFERLREAAFTYTFL 490 (505)
Q Consensus 475 ~~~~~~~~~~~~~~fl 490 (505)
...... ..+..||
T Consensus 240 eN~~V~---~~I~~FL 252 (255)
T PF06028_consen 240 ENPQVD---KLIIQFL 252 (255)
T ss_dssp CCHHHH---HHHHHHH
T ss_pred CCHHHH---HHHHHHh
Confidence 222222 2466666
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.5e-05 Score=64.82 Aligned_cols=118 Identities=16% Similarity=0.040 Sum_probs=67.8
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
++++|+|.|+|||.+.+++.++. ..+|..+|.+.....+.. .+.... .|. .-.++..+.++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P~~~L~~-~ig~~~-~y~----~~~~~h~~eL~---------- 120 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLFPEENMEG-KIDRPE-EYA----DIATKCVTNFR---------- 120 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCChHHHHHH-HhCCCc-chh----hhhHHHHHHhh----------
Confidence 46999999999999999999864 246667776665433211 110000 011 11222222333
Q ss_pred CCCC-eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 422 QNYP-HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 422 ~~~P-p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++.| ..+++..+.|++.++.++.+.+... .+..+.+ |+.|.+. +..+ ....+.+|+.
T Consensus 121 ~~~p~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~---GGdH~f~-~fe~---~l~~I~~F~~ 178 (180)
T PRK04940 121 EKNRDRCLVILSRNDEVLDSQRTAEELHPY------YEIVWDE---EQTHKFK-NISP---HLQRIKAFKT 178 (180)
T ss_pred hcCcccEEEEEeCCCcccCHHHHHHHhccC------ceEEEEC---CCCCCCC-CHHH---HHHHHHHHHh
Confidence 1112 3788889999999887776655322 1234554 7788764 2222 3345788874
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.8e-05 Score=72.56 Aligned_cols=71 Identities=20% Similarity=0.162 Sum_probs=46.5
Q ss_pred ccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHhcCC-CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHh
Q 010654 419 VKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKT-DDNILLFKCELGAGHFS-KSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 419 ~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~~fl~~~ 493 (505)
..+|+ +| +|.+-|+.|.+||+.++..+.+.....+- ..+.++.+ ++||.+ ..+...+.+-+..+.+||.++
T Consensus 333 l~~I~~~p-ll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~---~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVA-LLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQP---GVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccc-eEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecC---CCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 45777 87 99999999999999999888776532221 11223343 789943 333333334455678888753
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=8e-06 Score=85.35 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=82.6
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCC--chhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc-CCcc
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL-KKKN 321 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~--~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~-~~~~ 321 (505)
+...++.|... ...+ .|++|++|||.-.... ..+ ......+..+..+|+.++||-+ -+| |...+... .+..
T Consensus 97 LylNV~tp~~~-~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG-~lG--F~st~d~~~~gN~ 171 (545)
T KOG1516|consen 97 LYLNVYTPQGC-SESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLG-PLG--FLSTGDSAAPGNL 171 (545)
T ss_pred ceEEEeccCCC-ccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccce-ece--eeecCCCCCCCcc
Confidence 44566777665 2223 9999999998532211 111 1222355566899999999954 222 22122112 3556
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCc
Q 010654 322 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPF 376 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~ 376 (505)
.+.|+..|++|+.++ -.-||++|.|+|+|+||..+..++.. | .+|+.+|..+|.
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S-p~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS-PHSRGLFHKAISMSGN 231 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC-HhhHHHHHHHHhhccc
Confidence 678999999999875 23699999999999999988777653 3 478888877774
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.8e-05 Score=65.00 Aligned_cols=122 Identities=17% Similarity=0.173 Sum_probs=80.6
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC---------CCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR---------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~---------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
+....+|+.++|-.| ||.|+|.|+.+++.+++.. | .|+-+|..+|+.-.-
T Consensus 92 l~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~---------------- 150 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPS---------------- 150 (230)
T ss_pred HHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCc----------------
Confidence 555667888888777 6899999999999988721 2 356666666643210
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
.+.+ -..+...+++| .|.+.|+.|..||...+..|++....+ +++.. .+||..+...
T Consensus 151 ---~~~~-----------~~~~~~~i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a------~vl~H--pggH~VP~~~ 207 (230)
T KOG2551|consen 151 ---KKLD-----------ESAYKRPLSTP-SLHIFGETDTIVPSERSEQLAESFKDA------TVLEH--PGGHIVPNKA 207 (230)
T ss_pred ---chhh-----------hhhhccCCCCC-eeEEecccceeecchHHHHHHHhcCCC------eEEec--CCCccCCCch
Confidence 0001 11123456787 999999999999999999999988765 23332 5699876543
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 010654 477 FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~ 495 (505)
...+ .+.+|+...+.
T Consensus 208 -~~~~---~i~~fi~~~~~ 222 (230)
T KOG2551|consen 208 -KYKE---KIADFIQSFLQ 222 (230)
T ss_pred -HHHH---HHHHHHHHHHH
Confidence 2222 36777766553
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.00 E-value=9.8e-05 Score=68.83 Aligned_cols=120 Identities=18% Similarity=0.184 Sum_probs=81.2
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC----CCCchhHHHHHH-CCcEEEEEcccCCCCC
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND----PAFNSSRLSLLD-RGFIFAIAQIRGGGEL 306 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~----~~~~~~~~~l~~-~G~~v~~~d~rG~~~~ 306 (505)
..+++.+.. |+..|.+..+.-++. ++...||+.-|-...-.. ...+.....+++ .|-.|+..||||-|.+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S 185 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS 185 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC
Confidence 456677766 999998876653433 445677777654322111 011223445554 5999999999998754
Q ss_pred chhHHHcccccCCcchHHHHHHHHHHHHHcC-CCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
-. .. .....+.|..++++||.++. .+.+++|.+.|+|.||.+++.++..+
T Consensus 186 ~G------~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 186 TG------PP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CC------CC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 21 11 23467899999999999753 46789999999999999988776653
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0041 Score=62.62 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=88.9
Q ss_pred eEEEEECCCCCCCC-eEEEEecC----C-ceEE-EEEEeCCCcEEEEEecc--ccceEEEEEeCCCCCceeeeeccccce
Q 010654 9 KAWLHKLEADQSND-ICLYHEKD----D-IYSL-GLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 9 ~l~~~~lgt~~~~~-~~~~~~~~----~-~~~~-~~~~SpDg~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
.+|+........+. +.|+.... . .+.+ ...+||||++|+|.... .+...|+++|+++|+.+........+.
T Consensus 94 ~~~r~~~~~~~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~ 173 (414)
T PF02897_consen 94 VLYRRKTDEEDGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFS 173 (414)
T ss_dssp EEEEEETTS-TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESE
T ss_pred EEEEEecccCCCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccc
Confidence 35666655212333 56665321 2 2233 57899999999999654 456899999999986111111222222
Q ss_pred eEEeeeeCCEEEEEEcCCCCC------CceEEEeeCCCCCCceE-EEcCCCCce-eeEEEEeCC--EEEEEEecCCe-eE
Q 010654 80 DTAASHRGNHFFITRRSDELF------NSELLACPVDNTSETTV-LIPHRESVK-LQDIQLFID--HLAVYEREGGL-QK 148 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~------~~~l~~~~~~~~~~~~~-~~~~~~~~~-i~~~~~~~d--~l~~~~~~~~~-~~ 148 (505)
...|++||+.|+|.+...... ..++++..+.+...... ++....... .-.+..+.| .+++....... +.
T Consensus 174 ~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~ 253 (414)
T PF02897_consen 174 SVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESE 253 (414)
T ss_dssp EEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEE
T ss_pred eEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCe
Confidence 256999999999998764322 57899999976333323 444433332 446666765 56666666555 78
Q ss_pred EEEEEcCC
Q 010654 149 ITTYRLPA 156 (505)
Q Consensus 149 l~~~~~~~ 156 (505)
++++++..
T Consensus 254 v~~~d~~~ 261 (414)
T PF02897_consen 254 VYLLDLDD 261 (414)
T ss_dssp EEEEECCC
T ss_pred EEEEeccc
Confidence 88888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00078 Score=66.26 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=62.5
Q ss_pred CCCcEEEEE----cCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHH---
Q 010654 261 GSDPLLLYG----YGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL--- 333 (505)
Q Consensus 261 ~~~P~iv~~----hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l--- 333 (505)
.+.|.||.- ||- +..... -+.....-...|.-|..+-+.-. ....+.++|+..+....
T Consensus 67 ~krP~vViDPRAGHGp-GIGGFK-~dSevG~AL~~GHPvYFV~F~p~-------------P~pgQTl~DV~~ae~~Fv~~ 131 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGP-GIGGFK-PDSEVGVALRAGHPVYFVGFFPE-------------PEPGQTLEDVMRAEAAFVEE 131 (581)
T ss_pred CCCCeEEeCCCCCCCC-CccCCC-cccHHHHHHHcCCCeEEEEecCC-------------CCCCCcHHHHHHHHHHHHHH
Confidence 456777763 542 221111 13344445566888777765422 22235667777654433
Q ss_pred -HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEE-EecCCchhh
Q 010654 334 -IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA-VAAVPFVDV 379 (505)
Q Consensus 334 -~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~-v~~~~~~d~ 379 (505)
.++.- +..|..++|.+.||++++.+++.+|+++.-+ ++.+|+.-|
T Consensus 132 V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 132 VAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYW 178 (581)
T ss_pred HHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcccc
Confidence 33321 2238999999999999999999999988654 456676543
|
Their function is unknown. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00063 Score=60.40 Aligned_cols=144 Identities=16% Similarity=0.135 Sum_probs=86.4
Q ss_pred EEEEEeCCCcEEEEEeccc---------cceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCce
Q 010654 35 LGLQASESKKFLFIASESK---------ITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSE 103 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~---------~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~ 103 (505)
+...|+|+|.+|++..... ...+||.++..+.. ...+.-...+ ....|||+|+.|++.... .+ ..
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~-~~~i~l~~~~~I~~~~WsP~g~~favi~g~--~~-~~ 84 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIP-VESIELKKEGPIHDVAWSPNGNEFAVIYGS--MP-AK 84 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCc-cceeeccCCCceEEEEECcCCCEEEEEEcc--CC-cc
Confidence 4678999999999987631 25689999887765 5554433333 335699999999988643 22 26
Q ss_pred EEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 104 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
+.++++.. .....+.. ..+..+.|++++ +++....+-...+.+|++.. ...+. +. +.. ....
T Consensus 85 v~lyd~~~--~~i~~~~~---~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~-~~~i~--------~~-~~~-~~t~ 148 (194)
T PF08662_consen 85 VTLYDVKG--KKIFSFGT---QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK-KKKIS--------TF-EHS-DATD 148 (194)
T ss_pred cEEEcCcc--cEeEeecC---CCceEEEECCCCCEEEEEEccCCCcEEEEEECCC-CEEee--------cc-ccC-cEEE
Confidence 77777753 22112322 234578899874 33333334446788999862 22111 11 111 1223
Q ss_pred CCCcccCCEEEEEEecC
Q 010654 182 SESVFSSRILRFHYSSL 198 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~ 198 (505)
..++|+|+.++...+.+
T Consensus 149 ~~WsPdGr~~~ta~t~~ 165 (194)
T PF08662_consen 149 VEWSPDGRYLATATTSP 165 (194)
T ss_pred EEEcCCCCEEEEEEecc
Confidence 56899999877655543
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0053 Score=58.37 Aligned_cols=181 Identities=12% Similarity=0.063 Sum_probs=97.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
...|++|++.++ +....+..... .....|+|||+.+++... ....++++|+.+++....+..........|+|+
T Consensus 10 d~~v~~~d~~t~--~~~~~~~~~~~--~~~l~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 83 (300)
T TIGR03866 10 DNTISVIDTATL--EVTRTFPVGQR--PRGITLSKDGKLLYVCAS--DSDTIQVIDLATGEVIGTLPSGPDPELFALHPN 83 (300)
T ss_pred CCEEEEEECCCC--ceEEEEECCCC--CCceEECCCCCEEEEEEC--CCCeEEEEECCCCcEEEeccCCCCccEEEECCC
Confidence 457999999775 23344442221 235789999998765543 245688999988762222332222223459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQG 166 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 166 (505)
|+.+++....+ ..|.++|+.+ ......+.. ...+..+.+++++-+++........+..++... +....
T Consensus 84 g~~l~~~~~~~----~~l~~~d~~~-~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~-~~~~~---- 151 (300)
T TIGR03866 84 GKILYIANEDD----NLVTVIDIET-RKVLAEIPV--GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKT-YEIVD---- 151 (300)
T ss_pred CCEEEEEcCCC----CeEEEEECCC-CeEEeEeeC--CCCcceEEECCCCCEEEEEecCCCeEEEEeCCC-CeEEE----
Confidence 99877665332 3788899875 221112221 122456778876533333332223455566542 21111
Q ss_pred CceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 167 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.... ......+++++..+++... ....++++++.+++
T Consensus 152 --~~~~~~---~~~~~~~s~dg~~l~~~~~---~~~~v~i~d~~~~~ 190 (300)
T TIGR03866 152 --NVLVDQ---RPRFAEFTADGKELWVSSE---IGGTVSVIDVATRK 190 (300)
T ss_pred --EEEcCC---CccEEEECCCCCEEEEEcC---CCCEEEEEEcCcce
Confidence 011001 0112345677876665432 23568888887765
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00019 Score=61.80 Aligned_cols=155 Identities=13% Similarity=0.163 Sum_probs=92.3
Q ss_pred hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 284 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 284 ~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
....|+++|+.|+-+|-+ +-|.. .........|+...+++..++.. .+++.++|+|+|+-+.-.+..+-
T Consensus 21 ~a~~l~~~G~~VvGvdsl------~Yfw~---~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSL------RYFWS---ERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHHHCCCeEEEechH------HHHhh---hCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhC
Confidence 346899999999999964 11221 22333567888899988887744 37999999999999888888877
Q ss_pred CC----ceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCC
Q 010654 364 PD----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVM 439 (505)
Q Consensus 364 p~----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp 439 (505)
|. .++.+++.+|-... .+ ......| +|.+... ..+.+...+.++...+++.|.|+++.-.+
T Consensus 90 p~~~r~~v~~v~Ll~p~~~~-dF------eihv~~w--lg~~~~~------~~~~~~pei~~l~~~~v~CiyG~~E~d~~ 154 (192)
T PF06057_consen 90 PAALRARVAQVVLLSPSTTA-DF------EIHVSGW--LGMGGDD------AAYPVIPEIAKLPPAPVQCIYGEDEDDSL 154 (192)
T ss_pred CHHHHhheeEEEEeccCCcc-eE------EEEhhhh--cCCCCCc------ccCCchHHHHhCCCCeEEEEEcCCCCCCc
Confidence 76 45555555553211 00 0000111 1222111 11234444555544469999998775422
Q ss_pred CChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChH
Q 010654 440 YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477 (505)
Q Consensus 440 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~ 477 (505)
...|+.. .++.+..| +||++..+..
T Consensus 155 -------cp~l~~~--~~~~i~lp----GgHHfd~dy~ 179 (192)
T PF06057_consen 155 -------CPSLRQP--GVEVIALP----GGHHFDGDYD 179 (192)
T ss_pred -------CccccCC--CcEEEEcC----CCcCCCCCHH
Confidence 1234443 45567776 5888765543
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.8e-05 Score=58.52 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=43.6
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
|.+|....+.|+. .+..+|+++||...... .|....+.|+++||.|+..|.||+|.+.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~--ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSG--RYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHH--HHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 5667666555543 15789999999754322 3666778999999999999999999875
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00045 Score=66.54 Aligned_cols=142 Identities=17% Similarity=0.201 Sum_probs=89.3
Q ss_pred chHHHHHHHHHHHHHcCC--CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh-hhhccCCCCCC-------
Q 010654 321 NTFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV-LTTMLDPTIPL------- 390 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~--~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~-~~~~~~~~~~~------- 390 (505)
-+.-|++.|+.++.++-. .+.-++.++|+|+|||++..++--.|..|.+++--++..-. +.+..+.....
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~ 240 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSG 240 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccc
Confidence 356788889999888722 22348889999999999999999899999999876654322 11111111100
Q ss_pred -------------Ccccccc-cCCCC--CHHHHHHHHhC-Ch--hhcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHH
Q 010654 391 -------------TTAEWEE-WGDPW--KEEFYFYMKSY-SP--VDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKL 450 (505)
Q Consensus 391 -------------~~~~~~~-~g~~~--~~~~~~~~~~~-sp--~~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L 450 (505)
....|.. .+.|. .++.+ .++.. ++ +.-..+. +-|-....|+..|+.+|+++-.++++.|
T Consensus 241 ~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~-~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l 319 (403)
T PF11144_consen 241 EFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARY-IIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEIL 319 (403)
T ss_pred cccccCCEEEEEEeccccccCCCCccccChHHH-HHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHH
Confidence 0001111 12221 12111 22222 11 1111111 3345788999999999999999999999
Q ss_pred HhcCCCCCeEEEE
Q 010654 451 REMKTDDNILLFK 463 (505)
Q Consensus 451 ~~~~~~~~~~~~~ 463 (505)
+..|-++++.+..
T Consensus 320 ~~lgfda~l~lIk 332 (403)
T PF11144_consen 320 KNLGFDATLHLIK 332 (403)
T ss_pred HHcCCCeEEEEec
Confidence 9999999999884
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00061 Score=70.73 Aligned_cols=163 Identities=15% Similarity=0.072 Sum_probs=91.2
Q ss_pred EEEEEEeCCCcEEEEEecc-----ccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC-------CCCC
Q 010654 34 SLGLQASESKKFLFIASES-----KITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD-------ELFN 101 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~-----~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~~ 101 (505)
..+++.||||++++|.... ...+.||+++..+ . .+.++....-....|||||++|++..+.. ....
T Consensus 352 vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~-~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 352 ITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-V-AVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred cccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-c-ceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 3478899999999999742 2467999999744 3 56666554322345999999999987531 1123
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEc--CCCCCcccccCCCceeeccCCee
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRL--PAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~--~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
.+++++++++ ++.. . ..+..+.++.|++|+ ++++. ++ ++++--+ ..+|. ..|+....+. +....
T Consensus 430 gql~~~~vd~-ge~~-~---~~~g~Issl~wSpDG~RiA~i~--~g--~v~Va~Vvr~~~G~--~~l~~~~~l~-~~l~~ 497 (591)
T PRK13616 430 GQLARTPVDA-SAVA-S---RVPGPISELQLSRDGVRAAMII--GG--KVYLAVVEQTEDGQ--YALTNPREVG-PGLGD 497 (591)
T ss_pred ceEEEEeccC-chhh-h---ccCCCcCeEEECCCCCEEEEEE--CC--EEEEEEEEeCCCCc--eeecccEEee-cccCC
Confidence 5788777765 4332 1 223358899999884 55444 44 4555222 22232 3332212221 11000
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
....+.|..++. +++..++...| ++++++.+..
T Consensus 498 ~~~~l~W~~~~~-L~V~~~~~~~~--v~~v~vDG~~ 530 (591)
T PRK13616 498 TAVSLDWRTGDS-LVVGRSDPEHP--VWYVNLDGSN 530 (591)
T ss_pred ccccceEecCCE-EEEEecCCCCc--eEEEecCCcc
Confidence 112234544444 65555544443 5777776443
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00052 Score=57.73 Aligned_cols=120 Identities=17% Similarity=0.219 Sum_probs=78.9
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
.+-....+|..+.++..+..- ++.+.+++||.|+.+++..+.+....++++...+|.- +.+.. . +
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~~~---~-------~- 101 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSRPE---I-------R- 101 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-ccccc---c-------c-
Confidence 455566788887776655432 4558999999999999999887666788888888742 11100 0 0
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
+. .+..++|+... +...| .+++++.+|+.|++++++.+++++-.+ ++... .+||.
T Consensus 102 -------~~---~~~tf~~~p~~-~lpfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~-----lv~~g---~~GHi 156 (181)
T COG3545 102 -------PK---HLMTFDPIPRE-PLPFP-SVVVASRNDPYVSYEHAEDLANAWGSA-----LVDVG---EGGHI 156 (181)
T ss_pred -------hh---hccccCCCccc-cCCCc-eeEEEecCCCCCCHHHHHHHHHhccHh-----heecc---ccccc
Confidence 00 11223333222 22344 999999999999999999999988664 23333 56774
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00019 Score=68.73 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=60.7
Q ss_pred hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 283 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 283 ~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.....++++|.-|++++.++-...-. ...+.....+++..|++.+++... .++|-+.|+|.||.+++.+++.
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHh
Confidence 35678999999999999875432111 112222344677788888887643 2689999999999999988887
Q ss_pred CCCc-eeEEEecCCchh
Q 010654 363 RPDL-FKAAVAAVPFVD 378 (505)
Q Consensus 363 ~p~~-~~a~v~~~~~~d 378 (505)
++.+ ++.+.......|
T Consensus 202 ~~~k~I~S~T~lts~~D 218 (445)
T COG3243 202 MAAKRIKSLTLLTSPVD 218 (445)
T ss_pred hhhcccccceeeecchh
Confidence 7766 666555444333
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.78 E-value=9.8e-05 Score=74.71 Aligned_cols=114 Identities=21% Similarity=0.235 Sum_probs=69.0
Q ss_pred CcEEEEEcCCCCcCCCC-CCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcc----cccCCcchHHHHHHHHHHHHHc
Q 010654 263 DPLLLYGYGSYEICNDP-AFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENG----KFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~-~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~----~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
.|++|++ ||-+..... ........||++ |-.|+...+|--|.+-. +.... ....-.+.++|+...++++..+
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 7888888 443322110 011123456664 99999999996654321 11111 1122237899999999999865
Q ss_pred C-CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh
Q 010654 337 C-YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378 (505)
Q Consensus 337 ~-~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 378 (505)
- ..+..++.++|+||||.+++|+-.++|++|.++++.++.+.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 34446899999999999999999999999999998877543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.71 E-value=2.5e-05 Score=64.63 Aligned_cols=112 Identities=16% Similarity=0.228 Sum_probs=76.8
Q ss_pred HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHH
Q 010654 329 CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYF 408 (505)
Q Consensus 329 ~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 408 (505)
--+|++++.. |.+..+.|.|+||+.++....++|++|..+|+.+|++|...++.+ ... .. .-|
T Consensus 90 yerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~-yyd-dD---v~y---------- 152 (227)
T COG4947 90 YERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGG-YYD-DD---VYY---------- 152 (227)
T ss_pred HHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccc-ccc-Cc---eee----------
Confidence 3356666643 466778999999999999999999999999999999997654421 100 00 001
Q ss_pred HHHhCChhhcccCCCCC---------eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 409 YMKSYSPVDNVKAQNYP---------HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 409 ~~~~~sp~~~~~~~~~P---------p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
.||.+++..+..| .+.+..|.+|+.. .+..++.+.|.+..+|..+.++.
T Consensus 153 ----nsP~dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L--~~~~~L~~~l~dKqipaw~~~Wg 210 (227)
T COG4947 153 ----NSPSDYLPGLADPFRLERLRRIDMVFCIGDEDPFL--DNNQHLSRLLSDKQIPAWMHVWG 210 (227)
T ss_pred ----cChhhhccCCcChHHHHHHhhccEEEEecCccccc--cchHHHHHHhccccccHHHHHhc
Confidence 2332222222111 4778889999887 46778889999998888776664
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00069 Score=70.34 Aligned_cols=134 Identities=7% Similarity=-0.009 Sum_probs=82.8
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc---------ccceEEEEEeCCCCCceeeeeccc
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELRVLTPRV 76 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~---------~~~~~l~~~d~~~~~~~~~l~~~~ 76 (505)
+..+||+.+.+.. .+.++.+. ....|.|||||++|.+.... ....++|+++++++. .++ .-.
T Consensus 377 ~~s~Lwv~~~gg~---~~~lt~g~---~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge-~~~--~~~ 447 (591)
T PRK13616 377 PASSLWVGPLGGV---AVQVLEGH---SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASA-VAS--RVP 447 (591)
T ss_pred cceEEEEEeCCCc---ceeeecCC---CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCch-hhh--ccC
Confidence 5678999997542 24454432 24579999999988877533 134689999998876 554 111
Q ss_pred cc-eeEEeeeeCCEEEEEEcCCCCCCceEEE---eeCCCCCCceE----EEcCCCCceeeEEEEeCCEEEEEEecCCeeE
Q 010654 77 VG-VDTAASHRGNHFFITRRSDELFNSELLA---CPVDNTSETTV----LIPHRESVKLQDIQLFIDHLAVYEREGGLQK 148 (505)
Q Consensus 77 ~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~ 148 (505)
.+ ..+.|||||++++|+.. .+|++ ...++ |..+. .++........++.|.++.-+++...++...
T Consensus 448 g~Issl~wSpDG~RiA~i~~------g~v~Va~Vvr~~~-G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~ 520 (591)
T PRK13616 448 GPISELQLSRDGVRAAMIIG------GKVYLAVVEQTED-GQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHP 520 (591)
T ss_pred CCcCeEEECCCCCEEEEEEC------CEEEEEEEEeCCC-CceeecccEEeecccCCccccceEecCCEEEEEecCCCCc
Confidence 12 23569999999999983 27777 34333 43221 2444444334678898874333445455455
Q ss_pred EEEEEcC
Q 010654 149 ITTYRLP 155 (505)
Q Consensus 149 l~~~~~~ 155 (505)
++.++++
T Consensus 521 v~~v~vD 527 (591)
T PRK13616 521 VWYVNLD 527 (591)
T ss_pred eEEEecC
Confidence 6666665
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0019 Score=53.72 Aligned_cols=141 Identities=17% Similarity=0.141 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe---cCCchhhhhhccCCCCCCCcccccccC
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA---AVPFVDVLTTMLDPTIPLTTAEWEEWG 399 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~---~~~~~d~~~~~~~~~~~~~~~~~~~~g 399 (505)
...+++-++-++.+. .|+ ..+|+|.|.|||.+.|++.++. +++++. ..|.-++..++..+..+.+...|.-
T Consensus 42 p~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l~gylg~~en~ytg~~y~l-- 115 (191)
T COG3150 42 PQQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYVL-- 115 (191)
T ss_pred HHHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEEe--
Confidence 344444455554442 232 3889999999999999998753 344332 2333344444333333333333310
Q ss_pred CCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCC-CCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHH
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 478 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~-D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 478 (505)
.+.+ ...+. ...+..++.|..|++.... |.+....++.+.+.... ..+.. |+.|.+.. ...
T Consensus 116 e~~h---I~~l~----~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~~-------~~V~d---gg~H~F~~-f~~ 177 (191)
T COG3150 116 ESRH---IATLC----VLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPCY-------EIVWD---GGDHKFKG-FSR 177 (191)
T ss_pred ehhh---HHHHH----HhhccccCCCcEEEeecccccHHHHHHHHHHHhhhhh-------heeec---CCCccccc-hHH
Confidence 0111 11111 1234444556566665555 88887776666665543 24566 67887642 222
Q ss_pred HHHHHHHHHHHH
Q 010654 479 RLREAAFTYTFL 490 (505)
Q Consensus 479 ~~~~~~~~~~fl 490 (505)
. +..+.+|.
T Consensus 178 ~---l~~i~aF~ 186 (191)
T COG3150 178 H---LQRIKAFK 186 (191)
T ss_pred h---HHHHHHHh
Confidence 2 23467775
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.021 Score=61.00 Aligned_cols=132 Identities=7% Similarity=0.078 Sum_probs=79.2
Q ss_pred CeEEEEec-----CCceEE-EEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-ceeeeeccccceeEEeeeeCCEEEE
Q 010654 22 DICLYHEK-----DDIYSL-GLQASESKKFLFIASESK--ITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFI 92 (505)
Q Consensus 22 ~~~~~~~~-----~~~~~~-~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~ 92 (505)
.+.|++.+ +..+.+ ...|||||++|++..... ...+|+++|+.+|. ....+.... ....|++||+.|+|
T Consensus 111 ~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y 188 (686)
T PRK10115 111 WETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYY 188 (686)
T ss_pred CEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEE
Confidence 45666521 233444 578999999999996543 57889999999875 122332211 22459999999999
Q ss_pred EEcCCC-CCCceEEEeeCCCCCCceE-EEcCCCC-ceeeEEEE-eCCEEEEEEecCCeeEEEEEEcC
Q 010654 93 TRRSDE-LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQL-FIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 93 ~~~~~~-~~~~~l~~~~~~~~~~~~~-~~~~~~~-~~i~~~~~-~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.++... ....++|+.++.+...... ++..... ..+....- ++..+++....+..+.+++++.+
T Consensus 189 ~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~ 255 (686)
T PRK10115 189 VRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred EEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence 988532 2337999999987322222 4442222 11222221 23356655555555677888754
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0064 Score=59.48 Aligned_cols=166 Identities=18% Similarity=0.187 Sum_probs=86.8
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceee---e-ecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV---L-TPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~---l-~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
.+.++|||+++++.....+ .|++++++... ++.. + .+...|.. ..|+|||+.+|+..... ..|.++++
T Consensus 148 ~v~~~pdg~~v~v~dlG~D--~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s----~~v~v~~~ 221 (345)
T PF10282_consen 148 QVVFSPDGRFVYVPDLGAD--RVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELS----NTVSVFDY 221 (345)
T ss_dssp EEEE-TTSSEEEEEETTTT--EEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTT----TEEEEEEE
T ss_pred eEEECCCCCEEEEEecCCC--EEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCC----CcEEEEee
Confidence 5678999999877654444 45555554432 1322 1 12223333 34999999999887653 35666665
Q ss_pred C-CCCCceE-----EEcCCC--CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 110 D-NTSETTV-----LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 110 ~-~~~~~~~-----~~~~~~--~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
. ..+..+. .++... .....++..++|+.++++...+...+.+|+++..++.++.+. .+.. ... ....
T Consensus 222 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~---~~~~-~G~-~Pr~ 296 (345)
T PF10282_consen 222 DPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQ---TVPT-GGK-FPRH 296 (345)
T ss_dssp ETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEE---EEEE-SSS-SEEE
T ss_pred cccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEE---EEeC-CCC-CccE
Confidence 5 1132211 121211 124667888887544444444556788999864444343221 1111 000 0122
Q ss_pred CCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.++++++.+++ .+....--.+|.+|.++|.
T Consensus 297 ~~~s~~g~~l~V-a~~~s~~v~vf~~d~~tG~ 327 (345)
T PF10282_consen 297 FAFSPDGRYLYV-ANQDSNTVSVFDIDPDTGK 327 (345)
T ss_dssp EEE-TTSSEEEE-EETTTTEEEEEEEETTTTE
T ss_pred EEEeCCCCEEEE-EecCCCeEEEEEEeCCCCc
Confidence 455778886554 4444455677888888887
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00085 Score=67.90 Aligned_cols=131 Identities=13% Similarity=0.009 Sum_probs=76.8
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC----------------chhHHHHHHCCcEEEEEc-ccCCCC
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF----------------NSSRLSLLDRGFIFAIAQ-IRGGGE 305 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~----------------~~~~~~l~~~G~~v~~~d-~rG~~~ 305 (505)
+..+..|++..... ....|+|++++||||.+...+. ......|.+.+ .++.+| ++|.|.
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~-~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEA-YVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccccc-CeEEEeCCCCcCc
Confidence 45676665554432 3567999999999986532211 01112466665 455555 567664
Q ss_pred CchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhC---C-------CceeEEEecC
Q 010654 306 LGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMR---P-------DLFKAAVAAV 374 (505)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~---p-------~~~~a~v~~~ 374 (505)
.-.... .....-....+|+..+++...++ +.....++.|+|+||||..+..++.+- . =-+++++...
T Consensus 136 S~~~~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYADKA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccCCCC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 322111 01111124567777777755443 434457899999999999776665431 1 1368888888
Q ss_pred Cchhh
Q 010654 375 PFVDV 379 (505)
Q Consensus 375 ~~~d~ 379 (505)
|.+|.
T Consensus 214 g~~dp 218 (462)
T PTZ00472 214 GLTDP 218 (462)
T ss_pred cccCh
Confidence 87664
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.017 Score=54.91 Aligned_cols=179 Identities=13% Similarity=0.060 Sum_probs=91.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-eeccccceeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGVDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~~~~~~~~~s~d 86 (505)
..|++||+.+. +....+.. ......+.|+|||+.+++.... .+.++.+|..++. ... +..........|+||
T Consensus 95 ~~l~~~d~~~~--~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~s~d 167 (300)
T TIGR03866 95 NLVTVIDIETR--KVLAEIPV--GVEPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYE-IVDNVLVDQRPRFAEFTAD 167 (300)
T ss_pred CeEEEEECCCC--eEEeEeeC--CCCcceEEECCCCCEEEEEecC--CCeEEEEeCCCCe-EEEEEEcCCCccEEEECCC
Confidence 46888888663 12222221 1112357899999998776442 3346667887765 322 211111222459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC------CCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR------ESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
|+.|++.+..+ ..++++|+++ ++..-.+... .......+.++++. +++... +..++.+|++.. +
T Consensus 168 g~~l~~~~~~~----~~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~--~~~~i~v~d~~~-~ 239 (300)
T TIGR03866 168 GKELWVSSEIG----GTVSVIDVAT-RKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG--PANRVAVVDAKT-Y 239 (300)
T ss_pred CCEEEEEcCCC----CEEEEEEcCc-ceeeeeeeecccccccccCCccceEECCCCCEEEEEcC--CCCeEEEEECCC-C
Confidence 99888765432 3788889875 3211011110 01112345666653 333322 224578888753 2
Q ss_pred CcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 159 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..... +.... .+..+.++++++.++.... .-..+.+++..+++
T Consensus 240 ~~~~~------~~~~~---~~~~~~~~~~g~~l~~~~~---~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 240 EVLDY------LLVGQ---RVWQLAFTPDEKYLLTTNG---VSNDVSVIDVAALK 282 (300)
T ss_pred cEEEE------EEeCC---CcceEEECCCCCEEEEEcC---CCCeEEEEECCCCc
Confidence 21111 11011 1223456778886543321 23468888887766
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0046 Score=54.85 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=61.3
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
..+++|||+|+.+++..... ...+-+.|++... ...+.... -....|||+|+.|++.+-. ...+.|..+|...
T Consensus 62 I~~~~WsP~g~~favi~g~~-~~~v~lyd~~~~~-i~~~~~~~-~n~i~wsP~G~~l~~~g~~--n~~G~l~~wd~~~-- 134 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGSM-PAKVTLYDVKGKK-IFSFGTQP-RNTISWSPDGRFLVLAGFG--NLNGDLEFWDVRK-- 134 (194)
T ss_pred eEEEEECcCCCEEEEEEccC-CcccEEEcCcccE-eEeecCCC-ceEEEECCCCCEEEEEEcc--CCCcEEEEEECCC--
Confidence 55889999999987775432 2266777776332 33332221 2234699999998887643 1235788899874
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEEE
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~~ 141 (505)
.. .+..........++|++|+.+++.
T Consensus 135 -~~-~i~~~~~~~~t~~~WsPdGr~~~t 160 (194)
T PF08662_consen 135 -KK-KISTFEHSDATDVEWSPDGRYLAT 160 (194)
T ss_pred -CE-EeeccccCcEEEEEEcCCCCEEEE
Confidence 22 222222234678999998655554
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0052 Score=54.87 Aligned_cols=195 Identities=20% Similarity=0.162 Sum_probs=105.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCC-----cEEEEEcccCCCCCchhHHHc--------ccc---cCCcchHHH
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRG-----FIFAIAQIRGGGELGRQWYEN--------GKF---LKKKNTFTD 325 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~rG~~~~g~~~~~~--------~~~---~~~~~~~~D 325 (505)
..| .+++||..|...+ ++.....+..++ -.++.+|.-|+=..-...... +.. ......-.=
T Consensus 45 ~iP-TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIP-TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccc-eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 345 4567886654332 333444444443 467788877753221111110 000 111112234
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
+..++.+|.++..+ .++-++||||||.....++..+.+ .....|+..+-++.-....++.. . +..--+.
T Consensus 122 lk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v--~--~v~~~~~ 195 (288)
T COG4814 122 LKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETV--T--DVLKDGP 195 (288)
T ss_pred HHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcch--h--eeeccCc
Confidence 55688889888655 578899999999988888766422 23445555444441111111111 1 1111111
Q ss_pred C-CCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCC------CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 401 P-WKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLND------PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 401 ~-~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D------~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
+ .....++++. .+.+.+ .+ -+|+|.|+.| -.||...+...+..+...+..+.--+|+.+ .+.|.
T Consensus 196 ~~~~t~y~~y~~-----~n~k~v~~~~-evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk-~a~Hs 268 (288)
T COG4814 196 GLIKTPYYDYIA-----KNYKKVSPNT-EVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGK-DARHS 268 (288)
T ss_pred cccCcHHHHHHH-----hcceeCCCCc-EEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCC-cchhh
Confidence 1 1111222222 111212 34 4999999765 579999999999999998888777788865 56785
Q ss_pred C
Q 010654 472 S 472 (505)
Q Consensus 472 ~ 472 (505)
-
T Consensus 269 ~ 269 (288)
T COG4814 269 K 269 (288)
T ss_pred c
Confidence 4
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.011 Score=57.10 Aligned_cols=128 Identities=19% Similarity=0.212 Sum_probs=84.1
Q ss_pred EEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC
Q 010654 57 FVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 135 (505)
Q Consensus 57 ~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d 135 (505)
.|-++|.++++ ++.+.+....+.. ..|+||+.++...+ +..|+++|+++ |..+ ++....+.-|.+++|.++
T Consensus 383 ~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNd-----r~el~vididn-gnv~-~idkS~~~lItdf~~~~n 454 (668)
T COG4946 383 KLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVAND-----RFELWVIDIDN-GNVR-LIDKSEYGLITDFDWHPN 454 (668)
T ss_pred eEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEcC-----ceEEEEEEecC-CCee-EecccccceeEEEEEcCC
Confidence 56667777775 6776665533332 38999998776543 35999999998 6666 777777778999999998
Q ss_pred EEEEEEe--cCC-eeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc
Q 010654 136 HLAVYER--EGG-LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 136 ~l~~~~~--~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
..++++. ..- ...+.+|++. +.++-. ++- +.+++.+ +++++|++.++|.......|.
T Consensus 455 sr~iAYafP~gy~tq~Iklydm~--~~Kiy~------vTT-~ta~Dfs-PaFD~d~ryLYfLs~RsLdPs 514 (668)
T COG4946 455 SRWIAYAFPEGYYTQSIKLYDMD--GGKIYD------VTT-PTAYDFS-PAFDPDGRYLYFLSARSLDPS 514 (668)
T ss_pred ceeEEEecCcceeeeeEEEEecC--CCeEEE------ecC-CcccccC-cccCCCCcEEEEEeccccCCC
Confidence 6555443 332 3357888876 332211 111 1223332 567889999988888766665
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.12 Score=50.11 Aligned_cols=138 Identities=11% Similarity=0.130 Sum_probs=69.9
Q ss_pred CceEEEEECCCCCCCCe--EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC-CCCceeeeeccc--cc-ee
Q 010654 7 PDKAWLHKLEADQSNDI--CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS-KPEELRVLTPRV--VG-VD 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~--~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~-~~~~~~~l~~~~--~~-~~ 80 (505)
...|..|++.+. .+.+ ..++... -.....+||||++|++.... ...+..++++ ++. +..+.... .. ..
T Consensus 11 ~~~I~~~~~~~~-g~l~~~~~~~~~~--~~~~l~~spd~~~lyv~~~~--~~~i~~~~~~~~g~-l~~~~~~~~~~~p~~ 84 (330)
T PRK11028 11 SQQIHVWNLNHE-GALTLLQVVDVPG--QVQPMVISPDKRHLYVGVRP--EFRVLSYRIADDGA-LTFAAESPLPGSPTH 84 (330)
T ss_pred CCCEEEEEECCC-CceeeeeEEecCC--CCccEEECCCCCEEEEEECC--CCcEEEEEECCCCc-eEEeeeecCCCCceE
Confidence 345888888543 2222 2222111 12245789999998776543 3445444443 454 43322111 11 22
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc-eE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSET-TV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..++|+|+.+|.....+ ..+.+++++..+.. .. .+... .....+.+++++-+++....+...+.+|+++.
T Consensus 85 i~~~~~g~~l~v~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~--~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 85 ISTDHQGRFLFSASYNA----NCVSVSPLDKDGIPVAPIQIIEGL--EGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred EEECCCCCEEEEEEcCC----CeEEEEEECCCCCCCCceeeccCC--CcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 34899999888776432 47777777531211 11 12111 12344556666433322333445688999875
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00026 Score=68.06 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=60.1
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCch-hHHHHHH---CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHH
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFNS-SRLSLLD---RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 335 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~---~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 335 (505)
+.+.|++|++||.........|.. ....+.+ ..+.|+++|+...... .+..+... -...-..+...+..|.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n--~~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVAN--TRLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhh--HHHHHHHHHHHHHHHHh
Confidence 356899999999876652333332 2343444 4899999998532211 11111000 00112334455667775
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCC
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVP 375 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~ 375 (505)
...+++++|-|+|||.||.++..++..... .+..+.+.-|
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 555789999999999999999999877654 4444544444
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.11 Score=50.96 Aligned_cols=195 Identities=14% Similarity=0.185 Sum_probs=97.7
Q ss_pred CceEEEEECCCCCCCCeEEE---EecCCceEEEEEEeCCCcEEEEEeccc-cce--EEEEEeCCCCCceeeeeccc-cce
Q 010654 7 PDKAWLHKLEADQSNDICLY---HEKDDIYSLGLQASESKKFLFIASESK-ITR--FVFYLDVSKPEELRVLTPRV-VGV 79 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~---~~~~~~~~~~~~~SpDg~~i~~~~~~~-~~~--~l~~~d~~~~~~~~~l~~~~-~~~ 79 (505)
..-|+.+++-+...+-.++- ...+|.| ..++||+++|+...... ... ..|.++-+++. ++.+.... .+.
T Consensus 12 ~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~---l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~-L~~~~~~~~~g~ 87 (345)
T PF10282_consen 12 GGGIYVFRFDEETGTLTLVQTVAEGENPSW---LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGT-LTLLNSVPSGGS 87 (345)
T ss_dssp STEEEEEEEETTTTEEEEEEEEEESSSECC---EEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTE-EEEEEEEEESSS
T ss_pred CCcEEEEEEcCCCCCceEeeeecCCCCCce---EEEEeCCCEEEEEEccccCCCCEEEEEECCCcce-eEEeeeeccCCC
Confidence 34567777722223222222 2223333 46799999987776543 333 45566666565 65554332 222
Q ss_pred ---eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEc---------CCCCceeeEEEEeCCEEEEEEecC
Q 010654 80 ---DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIP---------HRESVKLQDIQLFIDHLAVYEREG 144 (505)
Q Consensus 80 ---~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~---------~~~~~~i~~~~~~~d~l~~~~~~~ 144 (505)
...++|||+.|+.....+ ..+.++++...+.... ++. .+.......+.+++|+-+++...-
T Consensus 88 ~p~~i~~~~~g~~l~vany~~----g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl 163 (345)
T PF10282_consen 88 SPCHIAVDPDGRFLYVANYGG----GSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL 163 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTT----TEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET
T ss_pred CcEEEEEecCCCEEEEEEccC----CeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec
Confidence 234889999888776542 3566666654232111 121 112233557778887544455555
Q ss_pred CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 145 GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
|..++++|+++..+..++. ...+.++.... -..+.++++++.+++..+ ...--.++.++..++..
T Consensus 164 G~D~v~~~~~~~~~~~l~~---~~~~~~~~G~G-PRh~~f~pdg~~~Yv~~e-~s~~v~v~~~~~~~g~~ 228 (345)
T PF10282_consen 164 GADRVYVYDIDDDTGKLTP---VDSIKVPPGSG-PRHLAFSPDGKYAYVVNE-LSNTVSVFDYDPSDGSL 228 (345)
T ss_dssp TTTEEEEEEE-TTS-TEEE---EEEEECSTTSS-EEEEEE-TTSSEEEEEET-TTTEEEEEEEETTTTEE
T ss_pred CCCEEEEEEEeCCCceEEE---eeccccccCCC-CcEEEEcCCcCEEEEecC-CCCcEEEEeecccCCce
Confidence 7778999998754432322 12233333221 112446778776655544 33333445555445653
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.027 Score=52.74 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=95.3
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee----cccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT----PRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~----~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
...+|||++|+...-..+ ++++.+++.|. +.... +...|.. ..|+|+|+..|+....++ .+.++..+.
T Consensus 150 a~~tP~~~~l~v~DLG~D--ri~~y~~~dg~-L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s----tV~v~~y~~ 222 (346)
T COG2706 150 ANFTPDGRYLVVPDLGTD--RIFLYDLDDGK-LTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS----TVDVLEYNP 222 (346)
T ss_pred eeeCCCCCEEEEeecCCc--eEEEEEcccCc-cccccccccCCCCCcceEEEcCCCcEEEEEeccCC----EEEEEEEcC
Confidence 468999999887654433 45666666775 33322 2222433 349999998888887632 343333322
Q ss_pred C-CCce---E--EEcCCC--CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCC
Q 010654 112 T-SETT---V--LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE 183 (505)
Q Consensus 112 ~-~~~~---~--~~~~~~--~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 183 (505)
. ++.+ . .++.+. +....++..+.|+.++++...+...+.+|.++..++.+..+. .. +.....-.+++
T Consensus 223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~----~~-~teg~~PR~F~ 297 (346)
T COG2706 223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVG----IT-PTEGQFPRDFN 297 (346)
T ss_pred CCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEE----Ee-ccCCcCCccce
Confidence 1 2211 1 233332 234568889999888888777888899999986655332110 00 11111123456
Q ss_pred CcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 184 SVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 184 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++.++.++ ..+--..--.+|.++..+|+
T Consensus 298 i~~~g~~Li-aa~q~sd~i~vf~~d~~TG~ 326 (346)
T COG2706 298 INPSGRFLI-AANQKSDNITVFERDKETGR 326 (346)
T ss_pred eCCCCCEEE-EEccCCCcEEEEEEcCCCce
Confidence 666667554 44444444788999988887
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.044 Score=53.88 Aligned_cols=185 Identities=9% Similarity=0.027 Sum_probs=89.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
.+|.+.|..|. +....++. ....-.....|||||++++... ...|-++|+.+++..+.+.-........+|+||
T Consensus 16 ~~v~viD~~t~--~~~~~i~~-~~~~h~~~~~s~Dgr~~yv~~r---dg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG 89 (369)
T PF02239_consen 16 GSVAVIDGATN--KVVARIPT-GGAPHAGLKFSPDGRYLYVANR---DGTVSVIDLATGKVVATIKVGGNPRGIAVSPDG 89 (369)
T ss_dssp TEEEEEETTT---SEEEEEE--STTEEEEEE-TT-SSEEEEEET---TSEEEEEETTSSSEEEEEE-SSEEEEEEE--TT
T ss_pred CEEEEEECCCC--eEEEEEcC-CCCceeEEEecCCCCEEEEEcC---CCeEEEEECCcccEEEEEecCCCcceEEEcCCC
Confidence 45777886653 22333332 2223445678999999877532 357999999998734444433322334599999
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-----CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-----ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
++++...... ..+.++|.++....+.+-+.. ....+..+.-++.+-.|+++.....++++++.... ..+.
T Consensus 90 ~~~~v~n~~~----~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~-~~~~ 164 (369)
T PF02239_consen 90 KYVYVANYEP----GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP-KNLK 164 (369)
T ss_dssp TEEEEEEEET----TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS-SCEE
T ss_pred CEEEEEecCC----CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc-cccc
Confidence 9987665432 378888977632222111110 11223444444543323333222356788876421 1110
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...+..... ..+..++++++.++...... ..+-.++.++++
T Consensus 165 ----~~~i~~g~~---~~D~~~dpdgry~~va~~~s---n~i~viD~~~~k 205 (369)
T PF02239_consen 165 ----VTTIKVGRF---PHDGGFDPDGRYFLVAANGS---NKIAVIDTKTGK 205 (369)
T ss_dssp ----EEEEE--TT---EEEEEE-TTSSEEEEEEGGG---TEEEEEETTTTE
T ss_pred ----eeeeccccc---ccccccCcccceeeeccccc---ceeEEEeeccce
Confidence 011111011 11234567788665544433 277888877765
|
... |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0019 Score=57.99 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.||++||-.+. ....|......|.++||. |+..+|-..... . ..... .........+.+.|+.+++. .-.
T Consensus 3 PVVlVHG~~~~-~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~-~-~~~~~--~~~~~~~~~l~~fI~~Vl~~--TGa 75 (219)
T PF01674_consen 3 PVVLVHGTGGN-AYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS-P-SVQNA--HMSCESAKQLRAFIDAVLAY--TGA 75 (219)
T ss_dssp -EEEE--TTTT-TCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH-T-HHHHH--HB-HHHHHHHHHHHHHHHHH--HT-
T ss_pred CEEEECCCCcc-hhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC-C-ccccc--ccchhhHHHHHHHHHHHHHh--hCC
Confidence 37888997542 344577788999999999 799998433321 1 11100 11123346666677766654 224
Q ss_pred CcEEEEeeChHHHHHHHHHhh
Q 010654 342 EKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~ 362 (505)
||=|+|||+||.++-+++..
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHH
T ss_pred -EEEEEEcCCcCHHHHHHHHH
Confidence 89999999999999888753
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG2139 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.017 Score=54.04 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=75.6
Q ss_pred EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee-ccccce-eEEeeeeCCEEEEEEcCCCCCC
Q 010654 24 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGV-DTAASHRGNHFFITRRSDELFN 101 (505)
Q Consensus 24 ~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~-~~~~s~dg~~l~~~~~~~~~~~ 101 (505)
.|+..+.....-+.+|-+||..++ ..+...+.+.+.|.+++. ..+|. .+..|. ..-|||||.+|+-.+-+ . .
T Consensus 188 qvl~~pgh~pVtsmqwn~dgt~l~--tAS~gsssi~iWdpdtg~-~~pL~~~glgg~slLkwSPdgd~lfaAt~d-a--v 261 (445)
T KOG2139|consen 188 QVLQDPGHNPVTSMQWNEDGTILV--TASFGSSSIMIWDPDTGQ-KIPLIPKGLGGFSLLKWSPDGDVLFAATCD-A--V 261 (445)
T ss_pred hheeCCCCceeeEEEEcCCCCEEe--ecccCcceEEEEcCCCCC-cccccccCCCceeeEEEcCCCCEEEEeccc-c--e
Confidence 355555444455789999998754 445567788889999987 55555 333444 34599999987766644 1 1
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.+|+-..-. -..++|.+... .+....|++.+-++.+..-+.+.++.+..+
T Consensus 262 frlw~e~q~-wt~erw~lgsg---rvqtacWspcGsfLLf~~sgsp~lysl~f~ 311 (445)
T KOG2139|consen 262 FRLWQENQS-WTKERWILGSG---RVQTACWSPCGSFLLFACSGSPRLYSLTFD 311 (445)
T ss_pred eeeehhccc-ceecceeccCC---ceeeeeecCCCCEEEEEEcCCceEEEEeec
Confidence 344422211 13567877665 577888998765555555555655544443
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0039 Score=56.66 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=55.6
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHH--------HHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSL--------LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLI 334 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l--------~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 334 (505)
...||++||..++... +......+ ....+.++.+|+..... .+ .+..-....+-+..+++++.
T Consensus 4 g~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s---~~----~g~~l~~q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELS---AF----HGRTLQRQAEFLAEAIKYIL 74 (225)
T ss_pred CCEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCcccc---cc----ccccHHHHHHHHHHHHHHHH
Confidence 3678999996554221 11111111 11257788888764221 11 01111122344555666665
Q ss_pred HcC---CCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEec
Q 010654 335 KNC---YCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAA 373 (505)
Q Consensus 335 ~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~ 373 (505)
+.. ...+++|.++||||||.++-.++...+ +.++.+|..
T Consensus 75 ~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl 119 (225)
T PF07819_consen 75 ELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITL 119 (225)
T ss_pred HhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEE
Confidence 542 456789999999999988887776533 245555543
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.12 Score=46.73 Aligned_cols=183 Identities=11% Similarity=0.076 Sum_probs=103.3
Q ss_pred CCCCceEEEEECCCCCCC---CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-eeccccce
Q 010654 4 ILRPDKAWLHKLEADQSN---DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGV 79 (505)
Q Consensus 4 ~~r~~~l~~~~lgt~~~~---~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~~~~~ 79 (505)
+.|.-.+..|+|..+..+ ..+.|++ ...|..+...|+||.+.+ +.+. ...+.+.|+.+++ .++ +..+....
T Consensus 34 asrDk~ii~W~L~~dd~~~G~~~r~~~G-HsH~v~dv~~s~dg~~al-S~sw--D~~lrlWDl~~g~-~t~~f~GH~~dV 108 (315)
T KOG0279|consen 34 ASRDKTIIVWKLTSDDIKYGVPVRRLTG-HSHFVSDVVLSSDGNFAL-SASW--DGTLRLWDLATGE-STRRFVGHTKDV 108 (315)
T ss_pred cccceEEEEEEeccCccccCceeeeeec-cceEecceEEccCCceEE-eccc--cceEEEEEecCCc-EEEEEEecCCce
Confidence 457777999999655322 2344554 345666899999999854 3222 2357888999986 444 33333222
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC-CceeeEEEEeCC--E-EEEEEecCCeeEEEEEEc
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFID--H-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~d--~-l~~~~~~~~~~~l~~~~~ 154 (505)
...+|+|.++|.=-+ ++ .-|.+.+..+ .-...+.++. ...+.-+.|.++ . +++.+..+. .+.++++
T Consensus 109 lsva~s~dn~qivSGS-rD----kTiklwnt~g--~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk--tvKvWnl 179 (315)
T KOG0279|consen 109 LSVAFSTDNRQIVSGS-RD----KTIKLWNTLG--VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK--TVKVWNL 179 (315)
T ss_pred EEEEecCCCceeecCC-Cc----ceeeeeeecc--cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc--eEEEEcc
Confidence 245999998866333 22 2455566543 2222233332 335677788876 3 344444443 4677887
Q ss_pred CCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 155 PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. +.++ .-.++.....+.....||||... .+-..-.++++.+++.++
T Consensus 180 ~--~~~l-------~~~~~gh~~~v~t~~vSpDGslc----asGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 180 R--NCQL-------RTTFIGHSGYVNTVTVSPDGSLC----ASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred C--Ccch-------hhccccccccEEEEEECCCCCEE----ecCCCCceEEEEEccCCc
Confidence 6 2222 11233332233335568888832 234556678888887766
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0034 Score=58.77 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=69.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHH---HCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHH----HHHHHHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLL---DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFI----ACAEYLIK 335 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~----~~~~~l~~ 335 (505)
.++|+++-|-||-.. .|......|. ...|.|+.+.+.|.......- . .........++|.+ +.++.++.
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~-~-~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNS-K-FSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccc-c-ccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 478999999887432 1333334444 348999999999876543320 0 00112223344443 44444444
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCch
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFV 377 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~ 377 (505)
.......++.++|||.|+|+++.++.+.+ ..++.++...|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 32113468999999999999999999988 5777888777753
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.007 Score=60.50 Aligned_cols=166 Identities=18% Similarity=0.170 Sum_probs=95.0
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcE--EEEEcccCC-CCCchhHHHcccccCCcchHHHHHHHHHHHHH--
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFI--FAIAQIRGG-GELGRQWYENGKFLKKKNTFTDFIACAEYLIK-- 335 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~--v~~~d~rG~-~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-- 335 (505)
-.|+++.+||.+...-...|...++.+.+ .|-+ |..+|++-. || ..-....+-+..+.++.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhh
Confidence 35899999998833323334444443333 3433 333444311 11 1111223444445553332
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 415 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 415 (505)
.+..--..|.++|+|+|..+++.+.....|.+-.++.+.++.+-. . .-+ -|. .|+.
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~--v---dgp--------rgi-rDE~---------- 299 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT--V---DGP--------RGI-RDEA---------- 299 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccC--C---Ccc--------cCC-cchh----------
Confidence 244444689999999998888777766666554444443332210 0 000 011 1211
Q ss_pred hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 416 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 416 ~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
+. .++.| +|++.|.+|.+|++..-+++.+++++ +++++++. +++|.+
T Consensus 300 Ll---dmk~P-VLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~---~adhsm 346 (784)
T KOG3253|consen 300 LL---DMKQP-VLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIG---GADHSM 346 (784)
T ss_pred hH---hcCCc-eEEEecCCcccCCHHHHHHHHHHhhc---cceEEEec---CCCccc
Confidence 12 23455 99999999999999999999998886 45788887 889965
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0078 Score=55.56 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=39.6
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.+| -|.+.+..|..+|+.+.+++++..++.|.+++...|+ +..|
T Consensus 178 ~~p-~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~---~S~H 221 (240)
T PF05705_consen 178 RCP-RLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE---DSPH 221 (240)
T ss_pred CCC-eEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC---CCch
Confidence 566 8999999999999999999999999999999999998 4555
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0055 Score=60.16 Aligned_cols=132 Identities=17% Similarity=0.114 Sum_probs=83.1
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC--chhHHHHHH-CCcEEEEEcccCCCCC---chhHHHccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF--NSSRLSLLD-RGFIFAIAQIRGGGEL---GRQWYENGK 315 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~--~~~~~~l~~-~G~~v~~~d~rG~~~~---g~~~~~~~~ 315 (505)
.+..-+=+.+.+.... ....|+.|++-|-......+.- ...+..||+ .|-.|+...+|--|.. +.--....+
T Consensus 67 ~~~~~Qq~~y~n~~~~--~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk 144 (514)
T KOG2182|consen 67 NGKFFQQRFYNNNQWA--KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLK 144 (514)
T ss_pred hhhhhhhheeeccccc--cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchh
Confidence 3333333345555441 2346899999653222212211 122345555 5999999999955522 110001111
Q ss_pred ccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 316 FLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
...-.+.+.|+...++.+..+ +.-|+.+...+|+||-|.|++|.-..+|++..++|+.++
T Consensus 145 ~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 145 YLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 222336789999998888776 466667999999999999999999999999888887655
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.42 Score=46.33 Aligned_cols=116 Identities=9% Similarity=0.133 Sum_probs=60.8
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCC-CCceeee--eccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSK-PEELRVL--TPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~-~~~~~~l--~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
....++|||++|+..... .+.+.++++++ +...+.+ .+...+. ...++|||+++++....+ ..|.+++++
T Consensus 83 ~~i~~~~~g~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~----~~v~v~d~~ 156 (330)
T PRK11028 83 THISTDHQGRFLFSASYN--ANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKE----DRIRLFTLS 156 (330)
T ss_pred eEEEECCCCCEEEEEEcC--CCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCC----CEEEEEEEC
Confidence 356789999998766433 35566666653 3201111 1111111 223899999887765432 378888876
Q ss_pred CCCCce----EEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSETT----VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~----~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+... ..+.-........+.+++|+-+++....+...+.+|+++.
T Consensus 157 ~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 157 DDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred CCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 422110 0111111222446777777433333333346688888863
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0017 Score=64.85 Aligned_cols=88 Identities=19% Similarity=0.238 Sum_probs=60.7
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 010654 279 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358 (505)
Q Consensus 279 ~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~ 358 (505)
..|......|.+.||.+ ..|.+|.+ .+|+.. ......++++...++.+.+... ..+|.|+||||||.++..
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~g---YDwR~~---~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFG---YDFRQS---NRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCC---CCcccc---ccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHH
Confidence 34666778899999976 67888655 445532 1122446777777777766522 368999999999999999
Q ss_pred HHhhCCCc----eeEEEecCC
Q 010654 359 VLNMRPDL----FKAAVAAVP 375 (505)
Q Consensus 359 ~~~~~p~~----~~a~v~~~~ 375 (505)
++..+|+. ++..|+.++
T Consensus 179 fl~~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HHHHCCHhHHhHhccEEEECC
Confidence 88888864 355555444
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0023 Score=39.99 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=22.5
Q ss_pred eEEEEEEeCCCcEEEEEeccc--cceEEEE
Q 010654 33 YSLGLQASESKKFLFIASESK--ITRFVFY 60 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~--~~~~l~~ 60 (505)
....+.|||||++|+|.+... ...+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 566889999999999998877 6777774
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.011 Score=59.58 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=73.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC---------c--------hhHHHHHHCCcEEEEEcccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF---------N--------SSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~---------~--------~~~~~l~~~G~~v~~~d~rG~ 303 (505)
..+..+..|++...+ ...+.|+||++.||||.+...+. . .....|.+. ..++.+|.+-+
T Consensus 21 ~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvG 96 (415)
T PF00450_consen 21 NENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVG 96 (415)
T ss_dssp TTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STT
T ss_pred CCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCc
Confidence 356678766443332 23567999999999986532110 0 011245554 67888996655
Q ss_pred CCCchhHHHcccccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHH----hhC------CCceeEEEe
Q 010654 304 GELGRQWYENGKFLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVL----NMR------PDLFKAAVA 372 (505)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~----~~~------p~~~~a~v~ 372 (505)
.||...-........-....+|+..++.. +...+......+.|+|.||||..+-.++ ... .=.+++++.
T Consensus 97 tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~I 176 (415)
T PF00450_consen 97 TGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAI 176 (415)
T ss_dssp STT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEE
T ss_pred eEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccccee
Confidence 55433211111111112455666666654 4444555556899999999998654443 323 224889999
Q ss_pred cCCchhh
Q 010654 373 AVPFVDV 379 (505)
Q Consensus 373 ~~~~~d~ 379 (505)
..|++|.
T Consensus 177 Gng~~dp 183 (415)
T PF00450_consen 177 GNGWIDP 183 (415)
T ss_dssp ESE-SBH
T ss_pred cCccccc
Confidence 9998764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0028 Score=55.19 Aligned_cols=106 Identities=16% Similarity=0.090 Sum_probs=75.4
Q ss_pred cEEEEEcCCCCcCCC--CCCchhHHHHHHCCcEEEEEcccCCC-CCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 264 PLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 264 P~iv~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~~-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
-.||++ ||-+.... +.-.+...+|-+.+|..+.+..|.|- |||.-- -..+.+|+..+++++...++-
T Consensus 37 ~~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s--------lk~D~edl~~l~~Hi~~~~fS- 106 (299)
T KOG4840|consen 37 VKVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS--------LKDDVEDLKCLLEHIQLCGFS- 106 (299)
T ss_pred EEEEEE-cccCCCccccccHHHHHHHHhhccceeeeeecccccccccccc--------ccccHHHHHHHHHHhhccCcc-
Confidence 455666 54443322 22233456888899999999988664 355421 226789999999998877653
Q ss_pred CCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCchhhh
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVDVL 380 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d~~ 380 (505)
..|.++|||-|..-.++++++ .+..+.|+|+.+|+.|-.
T Consensus 107 -t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 -TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred -cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 489999999999988888743 245678999999998854
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.061 Score=52.86 Aligned_cols=139 Identities=13% Similarity=0.104 Sum_probs=78.4
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCC----------ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDD----------IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP 74 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~----------~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~ 74 (505)
+||.|=||---+... ...-+|++++= .|.-..+.||||++++-... ...+|++|-.+|+.+..|-.
T Consensus 155 ~KpsRPfRi~T~sdD-n~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs---Dgki~iyDGktge~vg~l~~ 230 (603)
T KOG0318|consen 155 FKPSRPFRIATGSDD-NTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS---DGKIYIYDGKTGEKVGELED 230 (603)
T ss_pred ccCCCceEEEeccCC-CeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC---CccEEEEcCCCccEEEEecC
Confidence 455555555444432 34456665441 23335789999998653322 34689999888863444432
Q ss_pred --cccceeE--EeeeeCCEEEEEEcCCCCCCceEEEeeCCCC-CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEE
Q 010654 75 --RVVGVDT--AASHRGNHFFITRRSDELFNSELLACPVDNT-SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKI 149 (505)
Q Consensus 75 --~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l 149 (505)
...|..| .||||+++++=.+.+ ...+|+ |+++. -..+|.+...-+-..-+..|.+|.|+.+...+ .+
T Consensus 231 ~~aHkGsIfalsWsPDs~~~~T~SaD---kt~KIW--dVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G---~i 302 (603)
T KOG0318|consen 231 SDAHKGSIFALSWSPDSTQFLTVSAD---KTIKIW--DVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSG---TI 302 (603)
T ss_pred CCCccccEEEEEECCCCceEEEecCC---ceEEEE--EeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCc---EE
Confidence 1234444 399999998876643 123444 44331 23455555443333457788888877665543 34
Q ss_pred EEEEcC
Q 010654 150 TTYRLP 155 (505)
Q Consensus 150 ~~~~~~ 155 (505)
.+++.+
T Consensus 303 n~ln~~ 308 (603)
T KOG0318|consen 303 NYLNPS 308 (603)
T ss_pred EEeccc
Confidence 556543
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.086 Score=50.43 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=77.8
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCCC-CchhHH-------
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGE-LGRQWY------- 311 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~-~g~~~~------- 311 (505)
.++.+..+ |++|... ..+.-+||++||.......+. .......|.+.||+++.+..+.--. .-..+.
T Consensus 69 ~~~~~fla-L~~~~~~---~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~ 144 (310)
T PF12048_consen 69 AGEERFLA-LWRPANS---AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVP 144 (310)
T ss_pred cCCEEEEE-EEecccC---CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCC
Confidence 35566644 4777654 355779999998654443222 2344578999999999988765110 000000
Q ss_pred Hccc---------------------ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-ceeE
Q 010654 312 ENGK---------------------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKA 369 (505)
Q Consensus 312 ~~~~---------------------~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a 369 (505)
.++. .......+.-+.+++.++..++. .++.|+|++.|+++++.++...+. ...+
T Consensus 145 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~~~~~~da 221 (310)
T PF12048_consen 145 SAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEKPPPMPDA 221 (310)
T ss_pred CCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcCCCcccCe
Confidence 0000 00011234455567777777763 458999999999999999887654 3567
Q ss_pred EEecCC
Q 010654 370 AVAAVP 375 (505)
Q Consensus 370 ~v~~~~ 375 (505)
.|...+
T Consensus 222 LV~I~a 227 (310)
T PF12048_consen 222 LVLINA 227 (310)
T ss_pred EEEEeC
Confidence 777665
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.38 Score=49.39 Aligned_cols=154 Identities=9% Similarity=0.043 Sum_probs=90.6
Q ss_pred CCCCCceEEEEECCCCCCCCeEEEEec---CC-ceE-E-EEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-ceeeee
Q 010654 3 EILRPDKAWLHKLEADQSNDICLYHEK---DD-IYS-L-GLQASESKKFLFIASESK--ITRFVFYLDVSKPE-ELRVLT 73 (505)
Q Consensus 3 ~~~r~~~l~~~~lgt~~~~~~~~~~~~---~~-~~~-~-~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-~~~~l~ 73 (505)
+...++-+|......+....+.|++.+ .+ +|+ + .++.|||+++++++.... ..-.|.+.|+.+|. .+..+.
T Consensus 94 ~~g~~y~~~~R~~~~g~~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~ 173 (682)
T COG1770 94 EEGKEYPIYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEIT 173 (682)
T ss_pred cCCCcceeEEeccCCCCCceeEeecchhccCcccceeeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhc
Confidence 444555566663333322244555432 12 444 3 578999999999987654 35678888999986 112222
Q ss_pred ccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc-CCCCceeeEEEE--eCCEEEEEEecCCeeEEE
Q 010654 74 PRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQL--FIDHLAVYEREGGLQKIT 150 (505)
Q Consensus 74 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~d~l~~~~~~~~~~~l~ 150 (505)
.. +....|.+|++.++|.+.....-..+|++..+.+......++- +..+...-.+.- +++.+++.......++++
T Consensus 174 ~~--~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ 251 (682)
T COG1770 174 NT--SGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVR 251 (682)
T ss_pred cc--ccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEE
Confidence 11 2234599999999999877543346888888876333333343 333322222222 334677777666677888
Q ss_pred EEEcCCCC
Q 010654 151 TYRLPAVG 158 (505)
Q Consensus 151 ~~~~~~~~ 158 (505)
+++.+..+
T Consensus 252 ll~a~~p~ 259 (682)
T COG1770 252 LLDADDPE 259 (682)
T ss_pred EEecCCCC
Confidence 88876433
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.02 Score=49.61 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=61.6
Q ss_pred EEEEeCCccCCCCCCcEEEEEcCCCCcCCC---------CCCc-----hhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 249 CIVYRKNLVKLDGSDPLLLYGYGSYEICND---------PAFN-----SSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 249 ~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~---------~~~~-----~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
+++..++. ...+..++|++||..-.... ...+ +....-.+.||-|++.|.-- -++|.+.-
T Consensus 89 FiF~s~~~--lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----~~kfye~k 162 (297)
T KOG3967|consen 89 FIFMSEDA--LTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----ERKFYEKK 162 (297)
T ss_pred eEEEChhH--hcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----hhhhhhcc
Confidence 44555553 23456799999996422111 0111 12234456799888888641 22233211
Q ss_pred cc--cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc
Q 010654 315 KF--LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL 366 (505)
Q Consensus 315 ~~--~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~ 366 (505)
.. ..-...++-+.-+-.+++.. ..++.|+++.|||||++++-++.+.|+.
T Consensus 163 ~np~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 163 RNPQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred cCcchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 10 01113344444444444332 3467899999999999999999998763
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.067 Score=47.62 Aligned_cols=139 Identities=12% Similarity=0.057 Sum_probs=72.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeeccc--ccee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRV--VGVD 80 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~--~~~~ 80 (505)
+.-+|++|||++.+-..+++ .|+ ..+..++..-|||++++.. +++ ..+|+.++-+.. ++.++.+-. .+..
T Consensus 144 qsg~irvWDl~~~~c~~~li-Pe~-~~~i~sl~v~~dgsml~a~-nnk--G~cyvW~l~~~~~~s~l~P~~k~~ah~~~i 218 (311)
T KOG0315|consen 144 QSGNIRVWDLGENSCTHELI-PED-DTSIQSLTVMPDGSMLAAA-NNK--GNCYVWRLLNHQTASELEPVHKFQAHNGHI 218 (311)
T ss_pred CCCcEEEEEccCCccccccC-CCC-CcceeeEEEcCCCcEEEEe-cCC--ccEEEEEccCCCccccceEhhheecccceE
Confidence 45579999999875444433 332 2345578899999997643 333 346666655543 334433221 1222
Q ss_pred --EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 81 --TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 81 --~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+|||+++|+-.+.+. .++..+.+++-..+-.++.. .+.+-+...+.|+-|++..... ....++++..
T Consensus 219 l~C~lSPd~k~lat~ssdk-----tv~iwn~~~~~kle~~l~gh-~rWvWdc~FS~dg~YlvTassd-~~~rlW~~~~ 289 (311)
T KOG0315|consen 219 LRCLLSPDVKYLATCSSDK-----TVKIWNTDDFFKLELVLTGH-QRWVWDCAFSADGEYLVTASSD-HTARLWDLSA 289 (311)
T ss_pred EEEEECCCCcEEEeecCCc-----eEEEEecCCceeeEEEeecC-CceEEeeeeccCccEEEecCCC-Cceeeccccc
Confidence 23999999988666541 34444444421111122222 1223344445565444433222 3456677764
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.68 Score=44.88 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=47.3
Q ss_pred EEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeee-ccc-c---c---eeEEeeeeCCEEEEEEcCCCCCCc
Q 010654 38 QASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLT-PRV-V---G---VDTAASHRGNHFFITRRSDELFNS 102 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~-~~~-~---~---~~~~~s~dg~~l~~~~~~~~~~~~ 102 (505)
..||||+.|++...- .+...|-++|+++.+....+. +.. . + ..+.+||||+++|+.... +..
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~---p~~ 128 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFS---PSP 128 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCC---CCC
Confidence 489999998877651 135678899999987233332 111 1 1 134599999998877533 235
Q ss_pred eEEEeeCCC
Q 010654 103 ELLACPVDN 111 (505)
Q Consensus 103 ~l~~~~~~~ 111 (505)
.+-++|++.
T Consensus 129 ~V~VvD~~~ 137 (352)
T TIGR02658 129 AVGVVDLEG 137 (352)
T ss_pred EEEEEECCC
Confidence 888999876
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.39 Score=44.39 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=75.4
Q ss_pred EEEEECCCCCCCCeEEEEec--C-CceEE-EEEEeCCCcEEEEEeccc----cc--eEEEEEeCCCCCceeeeeccccce
Q 010654 10 AWLHKLEADQSNDICLYHEK--D-DIYSL-GLQASESKKFLFIASESK----IT--RFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~--~-~~~~~-~~~~SpDg~~i~~~~~~~----~~--~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
+.+.++.++ +.+.+.+.. . +.... +....|||+ |.++.... .. ..||+++.+ ++ .+.+.......
T Consensus 62 ~~~~d~~~g--~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~~~~~~~p 136 (246)
T PF08450_consen 62 IAVVDPDTG--KVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVVADGLGFP 136 (246)
T ss_dssp EEEEETTTT--EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEEEEEESSE
T ss_pred eEEEecCCC--cEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce-EEEEecCcccc
Confidence 344477664 344555542 1 23333 678999999 55554332 12 689999998 54 55554332221
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC----ceEEEcCCC-CceeeEEEEeCC-EEEEEEecCCeeEEEEE
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE----TTVLIPHRE-SVKLQDIQLFID-HLAVYEREGGLQKITTY 152 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~-~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~ 152 (505)
-..|+|||+.||+.... ..+|++++++..+. .+....... ...+.+++.+.+ .|+++...+ .++.++
T Consensus 137 NGi~~s~dg~~lyv~ds~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~--~~I~~~ 210 (246)
T PF08450_consen 137 NGIAFSPDGKTLYVADSF----NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGG--GRIVVF 210 (246)
T ss_dssp EEEEEETTSSEEEEEETT----TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETT--TEEEEE
T ss_pred cceEECCcchheeecccc----cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCC--CEEEEE
Confidence 23499999999987654 24899999864222 121222222 224678888876 455554433 456777
Q ss_pred EcC
Q 010654 153 RLP 155 (505)
Q Consensus 153 ~~~ 155 (505)
+.+
T Consensus 211 ~p~ 213 (246)
T PF08450_consen 211 DPD 213 (246)
T ss_dssp ETT
T ss_pred CCC
Confidence 754
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.48 Score=43.70 Aligned_cols=130 Identities=9% Similarity=0.011 Sum_probs=81.5
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC---CCCC-CchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC---NDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~---~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
++..+.+.-|. ++..++- ++.++.|+|+..|.-.-.. .... ..+..+.+.++ |.|+-+|.+|.-.-...
T Consensus 23 ~e~~V~T~~G~-v~V~V~G-----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~ 95 (326)
T KOG2931|consen 23 QEHDVETAHGV-VHVTVYG-----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS 95 (326)
T ss_pred eeeeecccccc-EEEEEec-----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc
Confidence 33444555564 6555432 2234678899999743221 1111 22445677778 99999999987532222
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+. ....--.++|+.+-+-.+.+.-.+ +.|.-+|--+|+|+.+..|..||+++-+.|...+.
T Consensus 96 ~p----~~y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 96 FP----EGYPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred CC----CCCCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 21 111124556666666665554222 56778899999999999999999999999987653
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.034 Score=53.62 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=78.1
Q ss_pred CCceEEEEECCCCCCCCe-EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce--eEE
Q 010654 6 RPDKAWLHKLEADQSNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTA 82 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~-~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~--~~~ 82 (505)
|..-+|.|||.+.+.+.. +++.- ...+.-.+..|+|+.+|++..+ ...|+++...++. +..-..- .|. .+.
T Consensus 278 rrky~ysyDle~ak~~k~~~~~g~-e~~~~e~FeVShd~~fia~~G~---~G~I~lLhakT~e-li~s~Ki-eG~v~~~~ 351 (514)
T KOG2055|consen 278 RRKYLYSYDLETAKVTKLKPPYGV-EEKSMERFEVSHDSNFIAIAGN---NGHIHLLHAKTKE-LITSFKI-EGVVSDFT 351 (514)
T ss_pred cceEEEEeeccccccccccCCCCc-ccchhheeEecCCCCeEEEccc---CceEEeehhhhhh-hhheeee-ccEEeeEE
Confidence 445589999977643221 22221 1224446789999999988654 3468999888875 2211111 233 344
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
||-||+.|+..... +.+|+.|+....-.. .+..+....-..++.+.+.-+++.-.+ ..-+.+|+.+
T Consensus 352 fsSdsk~l~~~~~~-----GeV~v~nl~~~~~~~-rf~D~G~v~gts~~~S~ng~ylA~GS~-~GiVNIYd~~ 417 (514)
T KOG2055|consen 352 FSSDSKELLASGGT-----GEVYVWNLRQNSCLH-RFVDDGSVHGTSLCISLNGSYLATGSD-SGIVNIYDGN 417 (514)
T ss_pred EecCCcEEEEEcCC-----ceEEEEecCCcceEE-EEeecCccceeeeeecCCCceEEeccC-cceEEEeccc
Confidence 89999888877543 389999987522111 222222222235565666545554333 2346778754
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.74 Score=43.47 Aligned_cols=189 Identities=14% Similarity=0.218 Sum_probs=101.1
Q ss_pred EEEEECCCCCCC--Ce-EEEEecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccc-cc---ee
Q 010654 10 AWLHKLEADQSN--DI-CLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRV-VG---VD 80 (505)
Q Consensus 10 l~~~~lgt~~~~--~~-~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~-~~---~~ 80 (505)
|+.|++-+..++ .. ++.+..+|.| ..|+|++|.|+...... ..-..|.+|-++|. +..+-... .| ..
T Consensus 18 I~v~~ld~~~g~l~~~~~v~~~~npty---l~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p~y 93 (346)
T COG2706 18 IYVFNLDTKTGELSLLQLVAELGNPTY---LAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGR-LTFLNRQTLPGSPPCY 93 (346)
T ss_pred eEEEEEeCcccccchhhhccccCCCce---EEECCCCCEEEEEEecCCcCcEEEEEEcCCCCe-EEEeeccccCCCCCeE
Confidence 777777543332 22 2223333443 37899999876665542 34567888877776 65553221 12 23
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEcCCCC--------ceeeEEEEeCCEEEEEEecCCeeEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRES--------VKLQDIQLFIDHLAVYEREGGLQKI 149 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~--------~~i~~~~~~~d~l~~~~~~~~~~~l 149 (505)
.+++++|+.++..... . ..+-++++...|...- ++.+... .-......++++-+++..+-|..++
T Consensus 94 vsvd~~g~~vf~AnY~-~---g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 94 VSVDEDGRFVFVANYH-S---GSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred EEECCCCCEEEEEEcc-C---ceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 3488888766554433 2 3555666543222110 1221111 0023345567776666666678899
Q ss_pred EEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 150 TTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+|+++ +|. +++. .+..++...+ -..+.+.|+++ +++..+..+.--.++.++...++
T Consensus 170 ~~y~~~-dg~-L~~~---~~~~v~~G~G-PRHi~FHpn~k-~aY~v~EL~stV~v~~y~~~~g~ 226 (346)
T COG2706 170 FLYDLD-DGK-LTPA---DPAEVKPGAG-PRHIVFHPNGK-YAYLVNELNSTVDVLEYNPAVGK 226 (346)
T ss_pred EEEEcc-cCc-cccc---cccccCCCCC-cceEEEcCCCc-EEEEEeccCCEEEEEEEcCCCce
Confidence 999987 444 2211 1222222211 12245667766 55666666666677788766566
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.004 Score=60.74 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=70.2
Q ss_pred cEEEEEcCCCCcCCCCCCch-hHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---CC
Q 010654 264 PLLLYGYGSYEICNDPAFNS-SRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CY 338 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~ 338 (505)
-++|+++||.--...+..+. ....|+.. .-+|+.+|||-+ .+|--+.......-|.-.+-|..-|++|+.++ -.
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG-~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVG-AFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeec-cceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 38999999753332332221 12456665 458899999954 33332211111223445578888999999886 23
Q ss_pred CCCCcEEEEeeChHHHHH-HHHHhhC-CCceeEEEecCCchh
Q 010654 339 CTKEKLCIEGRSAGGLLI-GAVLNMR-PDLFKAAVAAVPFVD 378 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~-~~~~~~~-p~~~~a~v~~~~~~d 378 (505)
-||+||.++|.|+|+..+ +.+++-. -.+|+-+|+.+|-.+
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 589999999999997654 3333311 127888888777543
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=53.84 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
.+..++|++||..... ........|.....|+ .++....+..|.. ..|.. ..........++...++.|.+..
T Consensus 16 ~~~~vlvfVHGyn~~f-~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~--d~~~a~~s~~~l~~~L~~L~~~~- 90 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSF-EDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFY--DRESARFSGPALARFLRDLARAP- 90 (233)
T ss_pred CCCeEEEEEeCCCCCH-HHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhh--hhhhHHHHHHHHHHHHHHHHhcc-
Confidence 4568999999964331 1111122233333344 7888888866542 22221 11122244566666667766652
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhh
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
...+|-|++||||+.+++.++..
T Consensus 91 -~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 91 -GIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred -CCceEEEEEeCchHHHHHHHHHH
Confidence 24799999999999998887654
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.012 Score=53.83 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCCCCc
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKEK 343 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~r 343 (505)
.|+++|++.++ ...|....+.+...++.|..+.++|.+... .....++++.+. ++.+.+... ...
T Consensus 2 ~lf~~p~~gG~--~~~y~~la~~l~~~~~~v~~i~~~~~~~~~----------~~~~si~~la~~y~~~I~~~~~--~gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGS--ASSYRPLARALPDDVIGVYGIEYPGRGDDE----------PPPDSIEELASRYAEAIRARQP--EGP 67 (229)
T ss_dssp EEEEESSTTCS--GGGGHHHHHHHTTTEEEEEEECSTTSCTTS----------HEESSHHHHHHHHHHHHHHHTS--SSS
T ss_pred eEEEEcCCccC--HHHHHHHHHhCCCCeEEEEEEecCCCCCCC----------CCCCCHHHHHHHHHHHhhhhCC--CCC
Confidence 57888887663 233555555555545889999988765211 111344444432 233333221 138
Q ss_pred EEEEeeChHHHHHHHHHhh
Q 010654 344 LCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~ 362 (505)
+.++|||+||.++.-+|.+
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eeehccCccHHHHHHHHHH
Confidence 9999999999998887754
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.022 Score=52.73 Aligned_cols=128 Identities=12% Similarity=0.074 Sum_probs=69.0
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC---CCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC---NDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~---~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
++++-| .|++.+. + +..++.|+||-.|.-.-.. ...-|+..........|.++-+|.+|..+-...+..
T Consensus 4 v~t~~G-~v~V~v~---G--~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-- 75 (283)
T PF03096_consen 4 VETPYG-SVHVTVQ---G--DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-- 75 (283)
T ss_dssp EEETTE-EEEEEEE---S--S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T--
T ss_pred eccCce-EEEEEEE---e--cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc--
Confidence 344555 4655533 1 2234689999999743211 111122222233345699999999998763333221
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
...--.++++.+.+..+.+.-.+ +.+.-+|--+|+++.+..|..+|+++-+.|...+..
T Consensus 76 --~y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 76 --GYQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp --T-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred --cccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 11224556666655555554223 568889999999999999999999999999887743
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.069 Score=50.91 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=86.0
Q ss_pred cCCceEEEEEEeCCCcEEEEEecccc-ceEEEEEeCCCCC-ceeeeeccccceeEE-eeeeCCEEEEEEcCCCCCCceEE
Q 010654 29 KDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPE-ELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELL 105 (505)
Q Consensus 29 ~~~~~~~~~~~SpDg~~i~~~~~~~~-~~~l~~~d~~~~~-~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~l~ 105 (505)
.|+-|++ .+|++|++++-. +++ +.-+|.+..++.- -.+.+.....++.|- ||||.+++.--... -.+.
T Consensus 224 tdEVWfl--~FS~nGkyLAsa--SkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~-----e~~~ 294 (519)
T KOG0293|consen 224 TDEVWFL--QFSHNGKYLASA--SKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD-----EVLS 294 (519)
T ss_pred CCcEEEE--EEcCCCeeEeec--cCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch-----Hhee
Confidence 4555554 579999998633 333 3456666555431 123333444455554 99999977654433 1366
Q ss_pred EeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCc
Q 010654 106 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 185 (505)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (505)
+.|+.+ |...-..+.....++....|.+|+.-++.-... .++..++++ |.... -+.+. ..| . +..+..+
T Consensus 295 lwDv~t-gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d-r~i~~wdlD--gn~~~-~W~gv--r~~-~---v~dlait 363 (519)
T KOG0293|consen 295 LWDVDT-GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD-RTIIMWDLD--GNILG-NWEGV--RDP-K---VHDLAIT 363 (519)
T ss_pred eccCCc-chhhhhcccCcCCCcceeEEccCCceeEecCCC-CcEEEecCC--cchhh-ccccc--ccc-e---eEEEEEc
Confidence 667765 443323444434457789999997666554332 235566665 43211 11111 111 1 2234567
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCC
Q 010654 186 FSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 186 ~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
+||..++... .-+.+..++.++
T Consensus 364 ~Dgk~vl~v~----~d~~i~l~~~e~ 385 (519)
T KOG0293|consen 364 YDGKYVLLVT----VDKKIRLYNREA 385 (519)
T ss_pred CCCcEEEEEe----cccceeeechhh
Confidence 8888877666 234556665543
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0093 Score=59.27 Aligned_cols=88 Identities=19% Similarity=0.113 Sum_probs=64.8
Q ss_pred CCcEEEEEcCCCC-cCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---
Q 010654 262 SDPLLLYGYGSYE-ICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--- 336 (505)
Q Consensus 262 ~~P~iv~~hGg~~-~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 336 (505)
..-+|+++|||.- ++.........+.|+. .|.-|+.+||--..+ ...+...+.+.-|.-|++++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-----------aPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-----------APFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-----------CCCCcHHHHHHHHHHHHhcCHHH
Confidence 3568999999754 3444555566667766 599999999965443 33446778899999999886
Q ss_pred -CCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 337 -CYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 337 -~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
|+ ..+||++.|.|+||.++..++.
T Consensus 464 lG~-TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 464 LGS-TGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred hCc-ccceEEEeccCCCcceeehhHH
Confidence 43 3589999999999997655543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.63 Score=42.97 Aligned_cols=183 Identities=14% Similarity=0.091 Sum_probs=91.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEe-CCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc----cc--
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQAS-ESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV----VG-- 78 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~S-pDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~----~~-- 78 (505)
...+|++++..++ ...++..+. ..+.... +||+.++- .. ..+.++|.++++ .+.+.... ..
T Consensus 20 ~~~~i~~~~~~~~---~~~~~~~~~---~~G~~~~~~~g~l~v~-~~----~~~~~~d~~~g~-~~~~~~~~~~~~~~~~ 87 (246)
T PF08450_consen 20 PGGRIYRVDPDTG---EVEVIDLPG---PNGMAFDRPDGRLYVA-DS----GGIAVVDPDTGK-VTVLADLPDGGVPFNR 87 (246)
T ss_dssp TTTEEEEEETTTT---EEEEEESSS---EEEEEEECTTSEEEEE-ET----TCEEEEETTTTE-EEEEEEEETTCSCTEE
T ss_pred CCCEEEEEECCCC---eEEEEecCC---CceEEEEccCCEEEEE-Ec----CceEEEecCCCc-EEEEeeccCCCcccCC
Confidence 3456788887653 233344322 3455555 78765443 22 234566988886 66555432 11
Q ss_pred -eeEEeeeeCCEEEEEEcCCCC--CC--ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 79 -VDTAASHRGNHFFITRRSDEL--FN--SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 79 -~~~~~s~dg~~l~~~~~~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
.+..++++|+ ||+....... .. .+||+++..+ ..+.+.. ... ...++.|++|+-.++..+....+++.|+
T Consensus 88 ~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~--~~~~~~~-~~~-~pNGi~~s~dg~~lyv~ds~~~~i~~~~ 162 (246)
T PF08450_consen 88 PNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG--KVTVVAD-GLG-FPNGIAFSPDGKTLYVADSFNGRIWRFD 162 (246)
T ss_dssp EEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS--EEEEEEE-EES-SEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred CceEEEcCCCC-EEEEecCCCccccccccceEEECCCC--eEEEEec-Ccc-cccceEECCcchheeecccccceeEEEe
Confidence 1234888887 7777654211 11 6899999873 3332322 222 3568999987533322333334578888
Q ss_pred cCCCCCcccccCCCce-eeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 154 LPAVGEPLKSLQGGKS-VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 154 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++..+..+.. .+. ..++.......++..+.+|. +++... ....|++++.. |+
T Consensus 163 ~~~~~~~~~~---~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~---~~~~I~~~~p~-G~ 215 (246)
T PF08450_consen 163 LDADGGELSN---RRVFIDFPGGPGYPDGLAVDSDGN-LWVADW---GGGRIVVFDPD-GK 215 (246)
T ss_dssp EETTTCCEEE---EEEEEE-SSSSCEEEEEEEBTTS--EEEEEE---TTTEEEEEETT-SC
T ss_pred ccccccceee---eeeEEEcCCCCcCCCcceEcCCCC-EEEEEc---CCCEEEEECCC-cc
Confidence 7643431210 011 12222111112233444554 444433 44688888876 55
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2048 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.29 Score=49.71 Aligned_cols=145 Identities=12% Similarity=0.077 Sum_probs=82.2
Q ss_pred CCCceEEEEECCCCCCC----CeEEEE--ecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--
Q 010654 5 LRPDKAWLHKLEADQSN----DICLYH--EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-- 76 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~----~~~~~~--~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-- 76 (505)
|.++.+-+|.+|+...+ ...++. .++.....-.+.||||.+|++..-. +..||.+.-+.....+.+-...
T Consensus 350 w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~--~~~iy~L~~~~~vk~~~v~~~~~~ 427 (691)
T KOG2048|consen 350 WKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTVS--RTKIYRLQPDPNVKVINVDDVPLA 427 (691)
T ss_pred eccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeecc--ceEEEEeccCcceeEEEeccchhh
Confidence 45677888999987222 222222 2344555566899999999987543 4567877766522122221111
Q ss_pred --cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE-EEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 77 --VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 77 --~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
......++-|+..+++.+.. ...|..++++++....- -+.+. .-..|..+..+.++-++++.. +...+++|
T Consensus 428 ~~~a~~i~ftid~~k~~~~s~~----~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~-t~g~I~v~ 502 (691)
T KOG2048|consen 428 LLDASAISFTIDKNKLFLVSKN----IFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS-TRGQIFVY 502 (691)
T ss_pred hccceeeEEEecCceEEEEecc----cceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe-ccceEEEE
Confidence 11223488899998888833 24677777665322221 11222 122456666666654554443 55678999
Q ss_pred EcCC
Q 010654 153 RLPA 156 (505)
Q Consensus 153 ~~~~ 156 (505)
++.+
T Consensus 503 nl~~ 506 (691)
T KOG2048|consen 503 NLET 506 (691)
T ss_pred Eccc
Confidence 8873
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.98 Score=41.59 Aligned_cols=179 Identities=15% Similarity=0.133 Sum_probs=93.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
...+++|++.+.. ....+... ........|+|++++|+.... ...++++|+.+++....+........ ..|++
T Consensus 30 ~g~i~i~~~~~~~--~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~---~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 103 (289)
T cd00200 30 DGTIKVWDLETGE--LLRTLKGH-TGPVRDVAASADGTYLASGSS---DKTIRLWDLETGECVRTLTGHTSYVSSVAFSP 103 (289)
T ss_pred CcEEEEEEeeCCC--cEEEEecC-CcceeEEEECCCCCEEEEEcC---CCeEEEEEcCcccceEEEeccCCcEEEEEEcC
Confidence 3467888886642 22222221 112237789999988766543 45688888887542344433322222 34888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
+++. ++....+ ..+..+++.. +.....+... ...+..+.+.++. +++....++ .+.+|++.. +....
T Consensus 104 ~~~~-~~~~~~~----~~i~~~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~--~i~i~d~~~-~~~~~-- 171 (289)
T cd00200 104 DGRI-LSSSSRD----KTIKVWDVET-GKCLTTLRGH-TDWVNSVAFSPDGTFVASSSQDG--TIKLWDLRT-GKCVA-- 171 (289)
T ss_pred CCCE-EEEecCC----CeEEEEECCC-cEEEEEeccC-CCcEEEEEEcCcCCEEEEEcCCC--cEEEEEccc-cccce--
Confidence 8654 4444322 3788888864 2222233322 2347788888864 444433344 477888753 22111
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+. .....+..+.++++++.+++... -..+..++...++
T Consensus 172 ----~~~--~~~~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~ 210 (289)
T cd00200 172 ----TLT--GHTGEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGK 210 (289)
T ss_pred ----eEe--cCccccceEEECCCcCEEEEecC----CCcEEEEECCCCc
Confidence 111 11111233445666665554433 3567777776544
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.026 Score=54.09 Aligned_cols=88 Identities=22% Similarity=0.355 Sum_probs=62.7
Q ss_pred HCCcEEEEEcccCCCC---Cchh-HHHccc--ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 290 DRGFIFAIAQIRGGGE---LGRQ-WYENGK--FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 290 ~~G~~v~~~d~rG~~~---~g~~-~~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
+.+-.++.+..|-.|+ +|.. +..+.. ....++.+.|+...+.+|++........|.++|+||||.+++|.-.++
T Consensus 109 ~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY 188 (492)
T KOG2183|consen 109 ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY 188 (492)
T ss_pred hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC
Confidence 3578899999996653 3443 111100 112236789999999999887555567899999999999999999999
Q ss_pred CCceeEEE-ecCCch
Q 010654 364 PDLFKAAV-AAVPFV 377 (505)
Q Consensus 364 p~~~~a~v-~~~~~~ 377 (505)
|.+..++. +.+|+.
T Consensus 189 PHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 189 PHIVLGALAASAPVL 203 (492)
T ss_pred hhhhhhhhhccCceE
Confidence 99766554 556654
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.059 Score=51.33 Aligned_cols=130 Identities=13% Similarity=0.044 Sum_probs=80.0
Q ss_pred EEEEECCCCCCCCeEEEEecCCceE-EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cceeEEeeee
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYS-LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGVDTAASHR 86 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~-~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~s~d 86 (505)
+++||+.|+ +-...|... ..+. .+..|-|||..++..+. ...++..|+++.. ......-. .-.+..+++|
T Consensus 293 ~~lwDv~tg--d~~~~y~~~-~~~S~~sc~W~pDg~~~V~Gs~---dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~D 365 (519)
T KOG0293|consen 293 LSLWDVDTG--DLRHLYPSG-LGFSVSSCAWCPDGFRFVTGSP---DRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYD 365 (519)
T ss_pred eeeccCCcc--hhhhhcccC-cCCCcceeEEccCCceeEecCC---CCcEEEecCCcch-hhcccccccceeEEEEEcCC
Confidence 889999886 345566533 2344 47889999999654322 2558888888764 22221111 1123458999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|++++.+..+ .++..++.+.. ..+-+++. +..+..++.++|+.++..+-.. ..+.+|++.
T Consensus 366 gk~vl~v~~d-----~~i~l~~~e~~-~dr~lise--~~~its~~iS~d~k~~LvnL~~-qei~LWDl~ 425 (519)
T KOG0293|consen 366 GKYVLLVTVD-----KKIRLYNREAR-VDRGLISE--EQPITSFSISKDGKLALVNLQD-QEIHLWDLE 425 (519)
T ss_pred CcEEEEEecc-----cceeeechhhh-hhhccccc--cCceeEEEEcCCCcEEEEEccc-CeeEEeecc
Confidence 9999988854 36677777652 11113433 2357888999987666665433 347788876
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.58 Score=42.59 Aligned_cols=137 Identities=12% Similarity=0.024 Sum_probs=81.2
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-E-Ee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T-AA 83 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~-~~ 83 (505)
|...+.+|+.-+.. .-.+.++...+|..-+.|||.....++.+.+.+. -|-+.|+.+-+ ++.-.....+.. + .+
T Consensus 125 rDkTiklwnt~g~c--k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk-tvKvWnl~~~~-l~~~~~gh~~~v~t~~v 200 (315)
T KOG0279|consen 125 RDKTIKLWNTLGVC--KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK-TVKVWNLRNCQ-LRTTFIGHSGYVNTVTV 200 (315)
T ss_pred CcceeeeeeecccE--EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc-eEEEEccCCcc-hhhccccccccEEEEEE
Confidence 55668888874432 1122222225577778999986443343333322 35566777654 444333333332 2 39
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
||||..++. ++....+++.|++. ++. +-+-+....+.+++.++++..++...... +.++++..
T Consensus 201 SpDGslcas-----Ggkdg~~~LwdL~~-~k~--lysl~a~~~v~sl~fspnrywL~~at~~s--IkIwdl~~ 263 (315)
T KOG0279|consen 201 SPDGSLCAS-----GGKDGEAMLWDLNE-GKN--LYSLEAFDIVNSLCFSPNRYWLCAATATS--IKIWDLES 263 (315)
T ss_pred CCCCCEEec-----CCCCceEEEEEccC-Cce--eEeccCCCeEeeEEecCCceeEeeccCCc--eEEEeccc
Confidence 999987664 22336899999986 333 33333344578899999988877665432 77888764
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.49 Score=42.65 Aligned_cols=40 Identities=5% Similarity=0.133 Sum_probs=24.8
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 52 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~ 52 (505)
.+.+|+++++ +.+...+...+.+ ...|||||.++++..+.
T Consensus 88 ~ir~wd~r~~--k~~~~i~~~~eni--~i~wsp~g~~~~~~~kd 127 (313)
T KOG1407|consen 88 TIRIWDIRSG--KCTARIETKGENI--NITWSPDGEYIAVGNKD 127 (313)
T ss_pred eEEEEEeccC--cEEEEeeccCcce--EEEEcCCCCEEEEecCc
Confidence 4677888664 2333333333333 45799999999887543
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.058 Score=48.68 Aligned_cols=175 Identities=14% Similarity=0.050 Sum_probs=94.2
Q ss_pred EEEEEeCCccCCCCCCcEEEEEcCCCCcCCC--CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHH
Q 010654 248 ICIVYRKNLVKLDGSDPLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 325 (505)
Q Consensus 248 ~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 325 (505)
.|+..|+. .-.||+.-||.-.... -.|......|+++||+|++.-|.-+= +.. .......+.
T Consensus 8 ~wvl~P~~-------P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf----DH~-----~~A~~~~~~ 71 (250)
T PF07082_consen 8 SWVLIPPR-------PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF----DHQ-----AIAREVWER 71 (250)
T ss_pred cEEEeCCC-------CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC----cHH-----HHHHHHHHH
Confidence 46666653 2477777787533323 33555667899999999998875321 111 111133455
Q ss_pred HHHHHHHHHHcCCCCCC--cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccc----ccccC
Q 010654 326 FIACAEYLIKNCYCTKE--KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE----WEEWG 399 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~--rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~----~~~~g 399 (505)
+..+++.|.+++..++. .+.=+|||+|+-+-+.+....+..-++-+.. .+-| +-.+..+|+.... ..++
T Consensus 72 f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gnili-SFNN---~~a~~aIP~~~~l~~~l~~EF- 146 (250)
T PF07082_consen 72 FERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILI-SFNN---FPADEAIPLLEQLAPALRLEF- 146 (250)
T ss_pred HHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEE-ecCC---hHHHhhCchHhhhccccccCc-
Confidence 66677777776544433 5666899999998887776543221221211 1111 1111233321110 1122
Q ss_pred CCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK 454 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~ 454 (505)
.|.-.+....++... . .+..|+|-=.+|.. .|+..+.+.|+.+.
T Consensus 147 ~PsP~ET~~li~~~Y---~-----~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~ 190 (250)
T PF07082_consen 147 TPSPEETRRLIRESY---Q-----VRRNLLIKFNDDDI---DQTDELEQILQQRF 190 (250)
T ss_pred cCCHHHHHHHHHHhc---C-----CccceEEEecCCCc---cchHHHHHHHhhhc
Confidence 233333333333211 1 22467776777765 69999999998764
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.31 Score=44.98 Aligned_cols=97 Identities=7% Similarity=0.157 Sum_probs=56.4
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-eecc-ccc---eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPR-VVG---VDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~-~~~---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
...+|||||+|+++.+ .+.+|++|+=+|. ... +... ..+ ....++|||+.+.--+++ ++|+.++++
T Consensus 192 ~l~FS~dGK~iLlsT~---~s~~~~lDAf~G~-~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~d-----g~i~vw~~~ 262 (311)
T KOG1446|consen 192 DLEFSPDGKSILLSTN---ASFIYLLDAFDGT-VKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDD-----GTIHVWNLE 262 (311)
T ss_pred eeEEcCCCCEEEEEeC---CCcEEEEEccCCc-EeeeEeeccCCCCcceeEEECCCCcEEEEecCC-----CcEEEEEcC
Confidence 5678999999998754 4569999998886 322 2211 112 234599999865433322 488888887
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEEe
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYER 142 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~ 142 (505)
+ +..--.+.........-+.|.+....++..
T Consensus 263 t-g~~v~~~~~~~~~~~~~~~fnP~~~mf~sa 293 (311)
T KOG1446|consen 263 T-GKKVAVLRGPNGGPVSCVRFNPRYAMFVSA 293 (311)
T ss_pred C-CcEeeEecCCCCCCccccccCCceeeeeec
Confidence 6 322112222112234455567766555543
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.014 Score=36.33 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=17.7
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
..|||||++|+|.++..+....+||+
T Consensus 14 p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 14 PAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred EEEecCCCEEEEEecCCCCCCcCEEC
Confidence 34999999999999885223456663
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.82 Score=42.42 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=67.2
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.++++|+||+.+++.........||.....+.. ..+.....-....|+++| +++...+. ....++++-+..+ ..
T Consensus 27 ~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~--~~~~~g~~l~~PS~d~~g-~~W~v~~~--~~~~~~~~~~~~g-~~ 100 (253)
T PF10647_consen 27 TSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV--RPVLTGGSLTRPSWDPDG-WVWTVDDG--SGGVRVVRDSASG-TG 100 (253)
T ss_pred cceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc--eeeccCCccccccccCCC-CEEEEEcC--CCceEEEEecCCC-cc
Confidence 478999999999988855567889999876653 333222211223499995 45555432 2223444422222 11
Q ss_pred ceEEEcCCCCc-eeeEEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 115 TTVLIPHRESV-KLQDIQLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 115 ~~~~~~~~~~~-~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
....+...... .|..+.+++| ++.++...++..++++-.+.
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 11122222111 6888888887 67787776666777776554
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=2.6 Score=43.83 Aligned_cols=139 Identities=9% Similarity=0.041 Sum_probs=71.6
Q ss_pred ceEEEEECCCCCC------CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-e
Q 010654 8 DKAWLHKLEADQS------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-D 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~------~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~ 80 (505)
..|.+|++.++.. +....+.. .......+.|+|++..++++... ...|.+.|+.++.....+.. .... .
T Consensus 97 gtIrIWDi~t~~~~~~~i~~p~~~L~g-H~~~V~sVaf~P~g~~iLaSgS~--DgtIrIWDl~tg~~~~~i~~-~~~V~S 172 (568)
T PTZ00420 97 LTIRVWEIPHNDESVKEIKDPQCILKG-HKKKISIIDWNPMNYYIMCSSGF--DSFVNIWDIENEKRAFQINM-PKKLSS 172 (568)
T ss_pred CeEEEEECCCCCccccccccceEEeec-CCCcEEEEEECCCCCeEEEEEeC--CCeEEEEECCCCcEEEEEec-CCcEEE
Confidence 4578889865321 01112222 12234467899999987665443 34577888888752222322 2222 2
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe----CC-EEEEEEecCC--eeEEEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF----ID-HLAVYEREGG--LQKITTYR 153 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~d-~l~~~~~~~~--~~~l~~~~ 153 (505)
..|+|||+.|+..+.+ ..|.++|+.+ +.....+............|. ++ ..+++...++ ..++.+|+
T Consensus 173 lswspdG~lLat~s~D-----~~IrIwD~Rs-g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWD 246 (568)
T PTZ00420 173 LKWNIKGNLLSGTCVG-----KHMHIIDPRK-QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWD 246 (568)
T ss_pred EEECCCCCEEEEEecC-----CEEEEEECCC-CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEE
Confidence 3499999977544322 3688888875 322112222222111122222 33 3444433332 23688999
Q ss_pred cCC
Q 010654 154 LPA 156 (505)
Q Consensus 154 ~~~ 156 (505)
+..
T Consensus 247 lr~ 249 (568)
T PTZ00420 247 LKN 249 (568)
T ss_pred CCC
Confidence 863
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.069 Score=54.30 Aligned_cols=131 Identities=19% Similarity=0.188 Sum_probs=84.3
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCc----hhHHH--ccccc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELG----RQWYE--NGKFL 317 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g----~~~~~--~~~~~ 317 (505)
.|...+.+|.+. ++ ..+...-||........-. .....-+++||+++.-|- |+.+.. ..|.. .....
T Consensus 16 ~i~fev~LP~~W---Ng--R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW---NG--RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh---cc--CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 677777788765 12 3333333443332221110 002345688999999994 333221 12210 01123
Q ss_pred CCcchHHHHHHHHHHHHHcCC-CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh
Q 010654 318 KKKNTFTDFIACAEYLIKNCY-CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 381 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~-~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 381 (505)
++...+.+...+.+.|++.-+ ..|++-...|.|-||--++.+|.++|+.|.++++.+|..++..
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTH 154 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHH
Confidence 444667777777788887633 4678999999999999999999999999999999999888654
|
It also includes several bacterial homologues of unknown function. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.023 Score=51.37 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=42.5
Q ss_pred ccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC----CceeEEEec
Q 010654 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP----DLFKAAVAA 373 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p----~~~~a~v~~ 373 (505)
+||+......|.+....... ........|++|+.+.-.-.++.|.+.|||-||.+|..++...+ +++..+.+.
T Consensus 43 FRGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~f 119 (224)
T PF11187_consen 43 FRGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSF 119 (224)
T ss_pred EECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEe
Confidence 46664444555543222211 12233356667765542223456999999999999999988733 355555544
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.67 E-value=1 Score=42.99 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=81.2
Q ss_pred EEEEeCCCcEEEEEec-----cc---cceEEEEEeCCCCCceeeeecccc-ceeEEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 36 GLQASESKKFLFIASE-----SK---ITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~-----~~---~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
+....|||++.+=... .. ....||++|..++. .+++..... .+-..|||||+.+|+.-+. ..+|++
T Consensus 115 D~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~-~~l~~~~~~~~NGla~SpDg~tly~aDT~----~~~i~r 189 (307)
T COG3386 115 DGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGV-VRLLDDDLTIPNGLAFSPDGKTLYVADTP----ANRIHR 189 (307)
T ss_pred ceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCE-EEeecCcEEecCceEECCCCCEEEEEeCC----CCeEEE
Confidence 4577899986433333 11 23479999986553 455443221 1124599999998888654 258988
Q ss_pred eeCCC-C----CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 107 CPVDN-T----SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 107 ~~~~~-~----~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
++++. . +....+..........+++.+.++.+++....+-..+.+++.+ |..+ ..+.+|... ...
T Consensus 190 ~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd--G~l~------~~i~lP~~~--~t~ 259 (307)
T COG3386 190 YDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD--GKLL------GEIKLPVKR--PTN 259 (307)
T ss_pred EecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC--CcEE------EEEECCCCC--Ccc
Confidence 88762 1 1111233322333456777777765554333333467777654 5433 234454211 111
Q ss_pred CC-CcccCCEEEEEEecCCCC
Q 010654 182 SE-SVFSSRILRFHYSSLRTP 201 (505)
Q Consensus 182 ~~-~~~~~~~~~~~~~~~~~p 201 (505)
.. ..++.+.++++......+
T Consensus 260 ~~FgG~~~~~L~iTs~~~~~~ 280 (307)
T COG3386 260 PAFGGPDLNTLYITSARSGMS 280 (307)
T ss_pred ceEeCCCcCEEEEEecCCCCC
Confidence 11 123457777777666555
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.024 Score=44.37 Aligned_cols=42 Identities=33% Similarity=0.517 Sum_probs=35.5
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
+|+|++.++.|+.+|+..++++.+.|.. .+++..+ +.||+..
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~---g~gHg~~ 76 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVD---GAGHGVY 76 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEe---ccCccee
Confidence 3599999999999999999999998875 3678888 7799754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.048 Score=54.64 Aligned_cols=131 Identities=13% Similarity=0.101 Sum_probs=72.1
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-------Cc--------------hhHHHHHHCCcEEEEEccc
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-------FN--------------SSRLSLLDRGFIFAIAQIR 301 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-------~~--------------~~~~~l~~~G~~v~~~d~r 301 (505)
+..+..|++. ... .....|+|+++-||||.+...+ +. .....|.+. ..++.+|.+
T Consensus 49 ~~~lfy~f~e-s~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqP 124 (433)
T PLN03016 49 NVQFFYYFIK-SEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQP 124 (433)
T ss_pred CeEEEEEEEe-cCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCC
Confidence 4556555443 322 2356799999999998543110 00 011234444 567888865
Q ss_pred CCCCCchhHHHcccccCCc-chHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhh----C------CCceeE
Q 010654 302 GGGELGRQWYENGKFLKKK-NTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R------PDLFKA 369 (505)
Q Consensus 302 G~~~~g~~~~~~~~~~~~~-~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~------p~~~~a 369 (505)
-+.||... ......... ...+|+..++. |+...+..-...+.|+|.||||..+-.++.. . +=-+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 54444321 111111111 23356666665 3444444445679999999999855444332 1 114788
Q ss_pred EEecCCchhh
Q 010654 370 AVAAVPFVDV 379 (505)
Q Consensus 370 ~v~~~~~~d~ 379 (505)
++...|.++.
T Consensus 203 i~iGNg~t~~ 212 (433)
T PLN03016 203 YMLGNPVTYM 212 (433)
T ss_pred eEecCCCcCc
Confidence 8888887764
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.055 Score=54.26 Aligned_cols=133 Identities=14% Similarity=0.151 Sum_probs=72.9
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC---------c------------hhHHHHHHCCcEEEEEcc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF---------N------------SSRLSLLDRGFIFAIAQI 300 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~---------~------------~~~~~l~~~G~~v~~~d~ 300 (505)
.|..+..+++ .... .....|+|+++-||||.+...+. . .....|.+. ..++.+|.
T Consensus 50 ~~~~lf~~f~-es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDq 125 (437)
T PLN02209 50 ENVQFFYYFI-KSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQ 125 (437)
T ss_pred CCeEEEEEEE-ecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecC
Confidence 3555655544 3332 23457999999999986432111 0 011134444 46788886
Q ss_pred cCCCCCchhHHHcccccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHHhh----C------CCceeE
Q 010654 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R------PDLFKA 369 (505)
Q Consensus 301 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~------p~~~~a 369 (505)
+-+.||...-.... ...-..+.+|+..++.. +...+......+.|+|.||||..+-.++.. . +=-+++
T Consensus 126 PvGtGfSy~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~G 204 (437)
T PLN02209 126 PVGSGFSYSKTPIE-RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQG 204 (437)
T ss_pred CCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeee
Confidence 65555532111001 11111345666666654 334444444679999999999854444321 1 114678
Q ss_pred EEecCCchhh
Q 010654 370 AVAAVPFVDV 379 (505)
Q Consensus 370 ~v~~~~~~d~ 379 (505)
++...|.+|.
T Consensus 205 i~igng~td~ 214 (437)
T PLN02209 205 YVLGNPITHI 214 (437)
T ss_pred EEecCcccCh
Confidence 8888887764
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.29 Score=46.38 Aligned_cols=133 Identities=10% Similarity=-0.001 Sum_probs=76.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecccccee-EEe--
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAA-- 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~-- 83 (505)
..+-+||+-|. .......+ ...|...++|||||+.|+-. .-.+.|-+.|.++|+ .-+.|..+...+. ..|
T Consensus 137 ~TvR~WD~~Te--Tp~~t~Kg-H~~WVlcvawsPDgk~iASG---~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep 210 (480)
T KOG0271|consen 137 TTVRLWDLDTE--TPLFTCKG-HKNWVLCVAWSPDGKKIASG---SKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEP 210 (480)
T ss_pred ceEEeeccCCC--CcceeecC-CccEEEEEEECCCcchhhcc---ccCCeEEEecCCCCCcccccccCcccceeEEeecc
Confidence 34677888663 22222322 34588889999999998632 235678889988886 3344544443332 223
Q ss_pred ---eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 84 ---SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 84 ---s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.|..+.|+= +..+ ..+...|+.. +.....+.... ..+..+.|-++++++...++.. +.+|+..
T Consensus 211 ~hl~p~~r~las-~skD----g~vrIWd~~~-~~~~~~lsgHT-~~VTCvrwGG~gliySgS~Drt--Ikvw~a~ 276 (480)
T KOG0271|consen 211 LHLVPPCRRLAS-SSKD----GSVRIWDTKL-GTCVRTLSGHT-ASVTCVRWGGEGLIYSGSQDRT--IKVWRAL 276 (480)
T ss_pred cccCCCccceec-ccCC----CCEEEEEccC-ceEEEEeccCc-cceEEEEEcCCceEEecCCCce--EEEEEcc
Confidence 445553332 2222 2344445543 22222333332 3578899999999999888865 5567653
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=1 Score=46.19 Aligned_cols=140 Identities=10% Similarity=0.018 Sum_probs=73.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~ 85 (505)
..|.+||+.+++ ....+.. .......++|+|||+.|+.... ...|.++|+.++.....+...... ....|.+
T Consensus 148 gtVrIWDl~tg~--~~~~l~~-h~~~V~sla~spdG~lLatgs~---Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 148 MVVNVWDVERGK--AVEVIKC-HSDQITSLEWNLDGSLLCTTSK---DKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred CEEEEEECCCCe--EEEEEcC-CCCceEEEEEECCCCEEEEecC---CCEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence 468899997752 3333332 2334557899999998764433 345888898887623333333222 1234888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
++..++-.... ......+.+.|+............+....+....++.+. ++++... +...+.+|++.
T Consensus 222 ~~~~ivt~G~s-~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggk-gDg~Iriwdl~ 290 (493)
T PTZ00421 222 RKDLIITLGCS-KSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSK-GEGNIRCFELM 290 (493)
T ss_pred CCCeEEEEecC-CCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEe-CCCeEEEEEee
Confidence 88776544432 122347888888653222112222222223334455543 3333332 22357778875
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.081 Score=50.22 Aligned_cols=112 Identities=18% Similarity=0.241 Sum_probs=64.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCC-CchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGE-LGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~-~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
...-++|++||-...-... -....|...+.|+ +.+..-.+..|. +|..+ .++.-.....++...+++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf~da-v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~----DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY----DRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhHH-HHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc----chhhhhhhHHHHHHHHHHHHhCC
Confidence 3457999999864332111 1122344444454 223333332221 11111 12223356788889999999876
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCchhh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDV 379 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~ 379 (505)
.+ ++|.|++||||.++++.++.+- +..|+-+|..+|=.|.
T Consensus 189 ~~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 PV--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred CC--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 53 6899999999999988876541 2245666777775553
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=51.49 Aligned_cols=137 Identities=16% Similarity=0.089 Sum_probs=78.0
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhH----------------HHHHHCCcEEEEEcccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR----------------LSLLDRGFIFAIAQIRG 302 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~----------------~~l~~~G~~v~~~d~rG 302 (505)
....|..+..|++.-.. .....|+||++-||||.+...+...+. -.|.+. -.++..|-+-
T Consensus 52 ~~~~~~~LFYwf~eS~~---~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfLd~Pv 127 (454)
T KOG1282|consen 52 NESEGRQLFYWFFESEN---NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKE-ANILFLDQPV 127 (454)
T ss_pred CCCCCceEEEEEEEccC---CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccccc-ccEEEEecCC
Confidence 33467788877554432 234579999999999865322211110 123333 2456666654
Q ss_pred CCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCCCCcEEEEeeChHHHHHHHHH----hhC-----C-CceeEEE
Q 010654 303 GGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCTKEKLCIEGRSAGGLLIGAVL----NMR-----P-DLFKAAV 371 (505)
Q Consensus 303 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~----~~~-----p-~~~~a~v 371 (505)
+.||.-.-........-....+|...++ +|+.+.+.--.+...|.|.||+|..+-.+| ..+ | --+++.+
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 4444221111111112223456666555 577777766667899999999997544443 222 1 1478999
Q ss_pred ecCCchhh
Q 010654 372 AAVPFVDV 379 (505)
Q Consensus 372 ~~~~~~d~ 379 (505)
...|++|.
T Consensus 208 IGNg~td~ 215 (454)
T KOG1282|consen 208 IGNGLTDP 215 (454)
T ss_pred ecCcccCc
Confidence 99998774
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.1 Score=49.44 Aligned_cols=117 Identities=17% Similarity=0.128 Sum_probs=73.1
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC---------CcEEEEEcccCCCCCchhHHH
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR---------GFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~---------G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.|.+|+-.-..|+.. +..++.-.++++||.||+-.. |...+..|.+- -|-|++|-.+|.|-+ +
T Consensus 132 eGL~iHFlhvk~p~~-k~~k~v~PlLl~HGwPGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS-----d 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQK-KKKKKVKPLLLLHGWPGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS-----D 203 (469)
T ss_pred cceeEEEEEecCCcc-ccCCcccceEEecCCCchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcccC-----c
Confidence 678888766667765 444555556778999987432 22233333332 367899988876532 2
Q ss_pred cccccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEE
Q 010654 313 NGKFLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 371 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v 371 (505)
+. ...|-+. ..+..+++- +...|+ ++..|-|+-+|..++..++..+|+.+.+.-
T Consensus 204 ~~-sk~GFn~-~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 204 AP-SKTGFNA-AATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred CC-ccCCccH-HHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 11 1222222 223333333 344465 789999999999999999999999776543
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.6 Score=45.43 Aligned_cols=107 Identities=10% Similarity=0.182 Sum_probs=69.4
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc---c-ccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR---V-VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~---~-~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..++|+|+..++++.. +.-+|.+|+.+.+ +..+.+. + .... +.+|||++.|++..+. ++|+++...+
T Consensus 263 a~f~p~G~~~i~~s~r--rky~ysyDle~ak-~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~-----G~I~lLhakT 334 (514)
T KOG2055|consen 263 AEFAPNGHSVIFTSGR--RKYLYSYDLETAK-VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN-----GHIHLLHAKT 334 (514)
T ss_pred eeecCCCceEEEeccc--ceEEEEeeccccc-cccccCCCCcccchhheeEecCCCCeEEEcccC-----ceEEeehhhh
Confidence 5689999976665443 4568999999887 5444322 1 1222 4499999988877654 4788887654
Q ss_pred CCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 112 TSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
..|+-+-.....+.++.|+-|+ .+++.... .+++++++..
T Consensus 335 ---~eli~s~KieG~v~~~~fsSdsk~l~~~~~~--GeV~v~nl~~ 375 (514)
T KOG2055|consen 335 ---KELITSFKIEGVVSDFTFSSDSKELLASGGT--GEVYVWNLRQ 375 (514)
T ss_pred ---hhhhheeeeccEEeeEEEecCCcEEEEEcCC--ceEEEEecCC
Confidence 2333333345568888998774 44444333 4789999864
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=94.73 E-value=1.2 Score=41.06 Aligned_cols=127 Identities=14% Similarity=0.096 Sum_probs=71.2
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
...+.+|++.+.. ....+.. .......+.|+|||+.+++... ...+.++|+.++.....+........ ..|+|
T Consensus 156 ~~~i~i~d~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 229 (289)
T cd00200 156 DGTIKLWDLRTGK--CVATLTG-HTGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLSTGKCLGTLRGHENGVNSVAFSP 229 (289)
T ss_pred CCcEEEEEccccc--cceeEec-CccccceEEECCCcCEEEEecC---CCcEEEEECCCCceecchhhcCCceEEEEEcC
Confidence 3468888886542 2333332 2223446789999988877654 45688889887652233322222222 34888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCe
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGL 146 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~ 146 (505)
++. +++....+ ..++.+++.. +.....+... ...+..+.|+++ ..+++...++.
T Consensus 230 ~~~-~~~~~~~~----~~i~i~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~ 284 (289)
T cd00200 230 DGY-LLASGSED----GTIRVWDLRT-GECVQTLSGH-TNSVTSLAWSPDGKRLASGSADGT 284 (289)
T ss_pred CCc-EEEEEcCC----CcEEEEEcCC-ceeEEEcccc-CCcEEEEEECCCCCEEEEecCCCe
Confidence 854 44444322 3788888765 2222233322 335778888886 45555555553
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.58 E-value=7 Score=40.92 Aligned_cols=175 Identities=11% Similarity=0.105 Sum_probs=87.4
Q ss_pred eEEEEECCCCCCCCeEEEEecCCce-EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~-~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
+|.+|+..+. ..|++...... ....+.||||++|+-. .+...|-++|..+|-=...++.+..+.. ..|+..
T Consensus 331 QLlVweWqsE----sYVlKQQgH~~~i~~l~YSpDgq~iaTG---~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~ 403 (893)
T KOG0291|consen 331 QLLVWEWQSE----SYVLKQQGHSDRITSLAYSPDGQLIATG---AEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR 403 (893)
T ss_pred eEEEEEeecc----ceeeeccccccceeeEEECCCCcEEEec---cCCCcEEEEeccCceEEEEeccCCCceEEEEEEec
Confidence 4566665442 34554321111 2256899999987532 2234566667666521222333433433 348877
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQG 166 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 166 (505)
|+.+ +.+..+| .+-..|+.....-+ .++.......+.++.++.+.++++-......+++|++.+ |..+.-|.
T Consensus 404 g~~l-lssSLDG----tVRAwDlkRYrNfR-Tft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT-GqllDiLs- 475 (893)
T KOG0291|consen 404 GNVL-LSSSLDG----TVRAWDLKRYRNFR-TFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT-GQLLDILS- 475 (893)
T ss_pred CCEE-EEeecCC----eEEeeeecccceee-eecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec-Ceeeehhc-
Confidence 7654 4444433 44455654311222 334333444666777766655555444456789999875 33222222
Q ss_pred CceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEE
Q 010654 167 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDY 207 (505)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 207 (505)
|++ ..+.+++++++++. +...|...--.+|.+
T Consensus 476 GHE-------gPVs~l~f~~~~~~--LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 476 GHE-------GPVSGLSFSPDGSL--LASGSWDKTVRIWDI 507 (893)
T ss_pred CCC-------CcceeeEEccccCe--EEeccccceEEEEEe
Confidence 221 12344456677662 233444444455544
|
|
| >KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.36 Score=44.93 Aligned_cols=107 Identities=13% Similarity=0.035 Sum_probs=66.4
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
..+||+|++|+.... .+|.+-|..+-+ +.++....+.+.| .|+.|..++.-.-..+ ..+.+.++.. +
T Consensus 14 c~fSp~g~yiAs~~~----yrlviRd~~tlq-~~qlf~cldki~yieW~ads~~ilC~~yk~----~~vqvwsl~Q---p 81 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSR----YRLVIRDSETLQ-LHQLFLCLDKIVYIEWKADSCHILCVAYKD----PKVQVWSLVQ---P 81 (447)
T ss_pred eeECCCCCeeeeeee----eEEEEeccchhh-HHHHHHHHHHhhheeeeccceeeeeeeecc----ceEEEEEeec---c
Confidence 468999999875533 367777777764 5555444444444 4888877655444332 3666777754 5
Q ss_pred eE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 116 TV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 116 ~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+| -+.++.+ .++.++|++|+.-+..+..=..++.++++.+
T Consensus 82 ew~ckIdeg~a-gls~~~WSPdgrhiL~tseF~lriTVWSL~t 123 (447)
T KOG4497|consen 82 EWYCKIDEGQA-GLSSISWSPDGRHILLTSEFDLRITVWSLNT 123 (447)
T ss_pred eeEEEeccCCC-cceeeeECCCcceEeeeecceeEEEEEEecc
Confidence 56 3444444 4789999998644333333335677888764
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.8 Score=44.43 Aligned_cols=113 Identities=12% Similarity=0.161 Sum_probs=63.9
Q ss_pred EEEeC-CCcEEEEEeccccceEEEEEeCCCCC-----ceeeeecc-------ccce-eEEeeeeCCEEEEEEcCCC----
Q 010654 37 LQASE-SKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPR-------VVGV-DTAASHRGNHFFITRRSDE---- 98 (505)
Q Consensus 37 ~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~-----~~~~l~~~-------~~~~-~~~~s~dg~~l~~~~~~~~---- 98 (505)
+..++ ||++++++.. ..|+.+|+++.. .+..++.. ..|. ...+++||+++|++.....
T Consensus 199 P~~~~~dg~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~th 274 (352)
T TIGR02658 199 PAYSNKSGRLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTH 274 (352)
T ss_pred CceEcCCCcEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccc
Confidence 33456 8988766544 679999976654 12222211 1121 1348999999999653211
Q ss_pred -CCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEE-EEEEecCCeeEEEEEEcCC
Q 010654 99 -LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 99 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l-~~~~~~~~~~~l~~~~~~~ 156 (505)
.+..++.++|.++..... .+.-. ..+..+..++|+. .++........+.++|+.+
T Consensus 275 k~~~~~V~ViD~~t~kvi~-~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t 331 (352)
T TIGR02658 275 KTASRFLFVVDAKTGKRLR-KIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAET 331 (352)
T ss_pred cCCCCEEEEEECCCCeEEE-EEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcC
Confidence 233589999987622222 22211 1356777888744 3333333345588888753
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=94.36 E-value=7.1 Score=40.12 Aligned_cols=139 Identities=10% Similarity=0.019 Sum_probs=73.0
Q ss_pred ceEEEEECCCCCC-----CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-E
Q 010654 8 DKAWLHKLEADQS-----NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~-----~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~ 81 (505)
..|.+|++.+... +....+.+. ..-...+.|+|++..++++... ...|.+.|+.++.....+........ .
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L~gH-~~~V~~l~f~P~~~~iLaSgs~--DgtVrIWDl~tg~~~~~l~~h~~~V~sl 174 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHLQGH-TKKVGIVSFHPSAMNVLASAGA--DMVVNVWDVERGKAVEVIKCHSDQITSL 174 (493)
T ss_pred CEEEEEecCCCccccccCcceEEecCC-CCcEEEEEeCcCCCCEEEEEeC--CCEEEEEECCCCeEEEEEcCCCCceEEE
Confidence 4578888865321 112233322 2233467899998655554432 34578889888752333333332322 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEe--cCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYER--EGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~--~~~~~~l~~~~~~ 155 (505)
.|+|||+.|+..+.+ ..|.++|+.. +.....+............|.++ ..+++.. .....++.+|++.
T Consensus 175 a~spdG~lLatgs~D-----g~IrIwD~rs-g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr 245 (493)
T PTZ00421 175 EWNLDGSLLCTTSKD-----KKLNIIDPRD-GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR 245 (493)
T ss_pred EEECCCCEEEEecCC-----CEEEEEECCC-CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC
Confidence 499999876654432 3778888865 33221222222222334556654 3333322 2223468889875
|
|
| >KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.36 Score=48.75 Aligned_cols=98 Identities=8% Similarity=-0.006 Sum_probs=57.9
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-----cce
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-----VGV 79 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-----~~~ 79 (505)
.....|-+|||.+....- .+... .+-..+++|||||++++-..... .|.+++..++. +.+..+. .|.
T Consensus 697 syd~Ti~lWDl~~~~~~~-~l~gH--tdqIf~~AWSpdGr~~AtVcKDg---~~rVy~Prs~e--~pv~Eg~gpvgtRgA 768 (1012)
T KOG1445|consen 697 SYDSTIELWDLANAKLYS-RLVGH--TDQIFGIAWSPDGRRIATVCKDG---TLRVYEPRSRE--QPVYEGKGPVGTRGA 768 (1012)
T ss_pred hccceeeeeehhhhhhhh-eeccC--cCceeEEEECCCCcceeeeecCc---eEEEeCCCCCC--CccccCCCCccCcce
Confidence 345678999998863222 22222 23455789999999987665542 46666666553 3333222 122
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..-|--||+.++...-+..+ ..+|-.|+...
T Consensus 769 Ri~wacdgr~viv~Gfdk~S-eRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 769 RILWACDGRIVIVVGFDKSS-ERQVQMYDAQT 799 (1012)
T ss_pred eEEEEecCcEEEEecccccc-hhhhhhhhhhh
Confidence 33488899888877765332 34666666543
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=94.21 E-value=1.2 Score=47.87 Aligned_cols=153 Identities=7% Similarity=-0.051 Sum_probs=80.9
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeC--------CCCC-----ceee---eeccc-cceeEEeeeeCCEEEEEEcCCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDV--------SKPE-----ELRV---LTPRV-VGVDTAASHRGNHFFITRRSDEL 99 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~--------~~~~-----~~~~---l~~~~-~~~~~~~s~dg~~l~~~~~~~~~ 99 (505)
++|||||++++..+.. .--.+|-..- ++|. .++. +..+. +-.+..||||+..++-.+.+
T Consensus 75 VR~S~dG~~lAsGSDD-~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~D--- 150 (942)
T KOG0973|consen 75 VRFSPDGSYLASGSDD-RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLD--- 150 (942)
T ss_pred EEECCCCCeEeeccCc-ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEeccc---
Confidence 5699999998754322 2334555551 1111 1222 22222 11234599999877766654
Q ss_pred CCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeee
Q 010654 100 FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179 (505)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (505)
..+.+++..++...+ ++... ...+.++.|++-+.||+...+.+. +.+|+... ..+.....+.--..+...+ +
T Consensus 151 --nsViiwn~~tF~~~~-vl~~H-~s~VKGvs~DP~Gky~ASqsdDrt-ikvwrt~d--w~i~k~It~pf~~~~~~T~-f 222 (942)
T KOG0973|consen 151 --NSVIIWNAKTFELLK-VLRGH-QSLVKGVSWDPIGKYFASQSDDRT-LKVWRTSD--WGIEKSITKPFEESPLTTF-F 222 (942)
T ss_pred --ceEEEEccccceeee-eeecc-cccccceEECCccCeeeeecCCce-EEEEEccc--ceeeEeeccchhhCCCcce-e
Confidence 367777876653333 22222 224678999998888888776654 66777442 2121111111000111111 2
Q ss_pred cCCCCcccCCEEEEEEecCCCCc
Q 010654 180 DPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
.-++|||||..+ .+.+..+.|.
T Consensus 223 ~RlSWSPDG~~l-as~nA~n~~~ 244 (942)
T KOG0973|consen 223 LRLSWSPDGHHL-ASPNAVNGGK 244 (942)
T ss_pred eecccCCCcCee-cchhhccCCc
Confidence 236899998854 4555555554
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=94.21 E-value=4.1 Score=42.47 Aligned_cols=138 Identities=12% Similarity=-0.009 Sum_probs=71.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce--eE----
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DT---- 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~--~~---- 81 (505)
..|.+||+.+++ ....+. .+.-...++|+|||+.|+.... ...|.++|+.++.....+..+.... ..
T Consensus 148 gtIrIWDl~tg~--~~~~i~--~~~~V~SlswspdG~lLat~s~---D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~ 220 (568)
T PTZ00420 148 SFVNIWDIENEK--RAFQIN--MPKKLSSLKWNIKGNLLSGTCV---GKHMHIIDPRKQEIASSFHIHDGGKNTKNIWID 220 (568)
T ss_pred CeEEEEECCCCc--EEEEEe--cCCcEEEEEECCCCCEEEEEec---CCEEEEEECCCCcEEEEEecccCCceeEEEEee
Confidence 458889997753 222222 2223457889999998765432 3458888998876233333332211 11
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEE-EEecCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAV-YEREGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~-~~~~~~~~~l~~~~~~ 155 (505)
.|++|++.|+-.+..+ .....+.+.|+...+...-.+..+.....--..|+.+ +++| +...+ ..+++|++.
T Consensus 221 ~fs~d~~~IlTtG~d~-~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD--~tIr~~e~~ 293 (568)
T PTZ00420 221 GLGGDDNYILSTGFSK-NNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGD--GNCRYYQHS 293 (568)
T ss_pred eEcCCCCEEEEEEcCC-CCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECC--CeEEEEEcc
Confidence 1457887766555432 2224788889875333221222221111112334443 4444 44434 346778775
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.15 Score=46.94 Aligned_cols=85 Identities=18% Similarity=0.053 Sum_probs=49.2
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.++++|++.|.. ..|......|... .-|+..+.+|.+.... ....++|..+..-..+.+- -....
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----------~~~~l~~~a~~yv~~Ir~~-QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----------PFASLDDMAAAYVAAIRRV-QPEGP 66 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCccccccc----------ccCCHHHHHHHHHHHHHHh-CCCCC
Confidence 5688899876532 2233333444444 7788888887664222 1234455544332222210 01136
Q ss_pred EEEEeeChHHHHHHHHHhh
Q 010654 344 LCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~ 362 (505)
+.+.|||+||.++.-+|.+
T Consensus 67 y~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred EEEEeeccccHHHHHHHHH
Confidence 8899999999998888765
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.062 Score=48.65 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=17.2
Q ss_pred CcEEEEeeChHHHHHHHHHh
Q 010654 342 EKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~ 361 (505)
.+|.++|||+||.++-.++.
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 58999999999998877665
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=94.14 E-value=3.1 Score=40.96 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=70.6
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-c----cee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-V----GVD 80 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~----~~~ 80 (505)
|...|-++|+.+.+ .+-+-.-...-.+.+.|+||+++++... ..+.+-++|.++.+..+.+.... . ...
T Consensus 56 rdg~vsviD~~~~~----~v~~i~~G~~~~~i~~s~DG~~~~v~n~--~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~R 129 (369)
T PF02239_consen 56 RDGTVSVIDLATGK----VVATIKVGGNPRGIAVSPDGKYVYVANY--EPGTVSVIDAETLEPVKTIPTGGMPVDGPESR 129 (369)
T ss_dssp TTSEEEEEETTSSS----EEEEEE-SSEEEEEEE--TTTEEEEEEE--ETTEEEEEETTT--EEEEEE--EE-TTTS---
T ss_pred CCCeEEEEECCccc----EEEEEecCCCcceEEEcCCCCEEEEEec--CCCceeEeccccccceeecccccccccccCCC
Confidence 44567788887753 1211111223457889999999876532 24578889998876233332111 0 011
Q ss_pred ---EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 81 ---TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 81 ---~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
...+|.+..+++.-.+ ..+++.+|........ .-.......+.+..|++++.+|+...++...+.+++..
T Consensus 130 v~aIv~s~~~~~fVv~lkd----~~~I~vVdy~d~~~~~-~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~ 202 (369)
T PF02239_consen 130 VAAIVASPGRPEFVVNLKD----TGEIWVVDYSDPKNLK-VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK 202 (369)
T ss_dssp EEEEEE-SSSSEEEEEETT----TTEEEEEETTTSSCEE-EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred ceeEEecCCCCEEEEEEcc----CCeEEEEEeccccccc-eeeecccccccccccCcccceeeecccccceeEEEeec
Confidence 1246666665555433 2488888876532211 11111233467888888865555444445577777765
|
... |
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=94.12 E-value=1.1 Score=44.46 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=75.6
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc-EEEEEcccCCCCCchhHHHcccccC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF-IFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~-~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
...+..+-. .+.|-+. |.|+.|+.-|--. ..+|.. .-.|-..|. -.+.-|.|--||. |. .
T Consensus 272 D~~reEi~y-YFnPGD~-----KPPL~VYFSGyR~---aEGFEg-y~MMk~Lg~PfLL~~DpRleGGa---FY------l 332 (511)
T TIGR03712 272 DSKRQEFIY-YFNPGDF-----KPPLNVYFSGYRP---AEGFEG-YFMMKRLGAPFLLIGDPRLEGGA---FY------L 332 (511)
T ss_pred cCCCCeeEE-ecCCcCC-----CCCeEEeeccCcc---cCcchh-HHHHHhcCCCeEEeeccccccce---ee------e
Confidence 344666743 3666655 6799999976433 233432 234455566 5677889866642 21 1
Q ss_pred CcchH-HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 319 KKNTF-TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 319 ~~~~~-~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
+...+ +-+...++...+.-..+.+.+.+.|-|||.+-|+.+++.- .-.|+|..=|++++-..
T Consensus 333 Gs~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~NLGti 395 (511)
T TIGR03712 333 GSDEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLVNLGTI 395 (511)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC--CCceEEEcCcccchhhh
Confidence 11111 2334444433333235778999999999999999998864 24889999999886443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.18 Score=48.93 Aligned_cols=97 Identities=15% Similarity=0.087 Sum_probs=56.6
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.+|++||.... ...|......+...|+. +..+++.+....+. .....+-+.+-++.+......
T Consensus 61 pivlVhG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~ql~~~V~~~l~~~ga-- 126 (336)
T COG1075 61 PIVLVHGLGGG--YGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYS----------LAVRGEQLFAYVDEVLAKTGA-- 126 (336)
T ss_pred eEEEEccCcCC--cchhhhhhhhhcchHHHhcccccccccccCCCcc----------ccccHHHHHHHHHHHHhhcCC--
Confidence 67888996322 12233333345555666 66666664421111 112223333444444443322
Q ss_pred CcEEEEeeChHHHHHHHHHhhCC--CceeEEEecCC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRP--DLFKAAVAAVP 375 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p--~~~~a~v~~~~ 375 (505)
.++.+.|||+||..+..++...+ .+++..+...+
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 78999999999999999988877 67777776654
|
|
| >KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=94.00 E-value=2.6 Score=40.41 Aligned_cols=53 Identities=8% Similarity=0.092 Sum_probs=38.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 67 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~ 67 (505)
..+.+|++||+. + +++-+.++...+..|+-||.+++-+... ..|.++|..+++
T Consensus 154 n~v~iWnv~tge--a--li~l~hpd~i~S~sfn~dGs~l~TtckD---KkvRv~dpr~~~ 206 (472)
T KOG0303|consen 154 NTVSIWNVGTGE--A--LITLDHPDMVYSMSFNRDGSLLCTTCKD---KKVRVIDPRRGT 206 (472)
T ss_pred ceEEEEeccCCc--e--eeecCCCCeEEEEEeccCCceeeeeccc---ceeEEEcCCCCc
Confidence 468999999973 2 2222367788889999999998755443 357778877765
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.033 Score=54.30 Aligned_cols=37 Identities=24% Similarity=0.184 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHH
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
.-+.+++++|..+++-++++|.+.|.|+||+-++.-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4567889999999888899999999999999776644
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.94 E-value=2.4 Score=38.76 Aligned_cols=89 Identities=19% Similarity=0.203 Sum_probs=51.0
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCT 340 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d 340 (505)
.|+ |..||-...+.+..+....+.+.+. |..|.+.+. |.| -...|. ....+....+ +.+...+..
T Consensus 24 ~P~-ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-~~~s~l---------~pl~~Qv~~~ce~v~~m~~l- 90 (296)
T KOG2541|consen 24 VPV-IVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-IKDSSL---------MPLWEQVDVACEKVKQMPEL- 90 (296)
T ss_pred CCE-EEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-cchhhh---------ccHHHHHHHHHHHHhcchhc-
Confidence 454 4559976555554455556677665 888888876 222 111111 1223333333 333333322
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p 364 (505)
++-+-|+|.|.||..+-+++..-+
T Consensus 91 sqGynivg~SQGglv~Raliq~cd 114 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCD 114 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCC
Confidence 467889999999988877776544
|
|
| >KOG2139 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.76 E-value=1.1 Score=42.40 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=50.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEe-CCCCCceeeeecccccee-EEee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD-VSKPEELRVLTPRVVGVD-TAAS 84 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d-~~~~~~~~~l~~~~~~~~-~~~s 84 (505)
.+.+.+|+..+++. .++.... .+. +....|||||.+++...- .....||..+ .-+.+ ...+... -.. ..||
T Consensus 217 sssi~iWdpdtg~~-~pL~~~g-lgg-~slLkwSPdgd~lfaAt~-davfrlw~e~q~wt~e-rw~lgsg--rvqtacWs 289 (445)
T KOG2139|consen 217 SSSIMIWDPDTGQK-IPLIPKG-LGG-FSLLKWSPDGDVLFAATC-DAVFRLWQENQSWTKE-RWILGSG--RVQTACWS 289 (445)
T ss_pred cceEEEEcCCCCCc-ccccccC-CCc-eeeEEEcCCCCEEEEecc-cceeeeehhcccceec-ceeccCC--ceeeeeec
Confidence 35678888877654 3333222 122 335689999998765432 2344555322 22211 2222221 122 2399
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
|+|+.|.|..... ..||.+...
T Consensus 290 pcGsfLLf~~sgs----p~lysl~f~ 311 (445)
T KOG2139|consen 290 PCGSFLLFACSGS----PRLYSLTFD 311 (445)
T ss_pred CCCCEEEEEEcCC----ceEEEEeec
Confidence 9999999887531 366666543
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.32 Score=56.85 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.++++||+.+... .|......| ..++.|+.++.+|.+.. ......++++.+.+...+..-.. ..
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~l~~~l-~~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~~-~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSVLSRYL-DPQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQP-HG 1133 (1296)
T ss_pred CCCeEEecCCCCchH--HHHHHHHhc-CCCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhCC-CC
Confidence 366888998776432 344333333 45799999999887532 11113444444433333322111 24
Q ss_pred cEEEEeeChHHHHHHHHHhh---CCCceeEEEecCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVP 375 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~---~p~~~~a~v~~~~ 375 (505)
++.++|||+||.++..++.+ +++.....+...+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 78999999999999888874 4666666665443
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.55 E-value=1.9 Score=38.91 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=61.2
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-hHHHHHH-CC--cEEEEEcccCCCCCchhHHHccccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RG--FIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~-~G--~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
.|..++...+.|--. ......|+|+++-|.||.. +|.. ....|.. .+ .-|..+-.-|+......-++.....
T Consensus 9 ~gl~~si~~~~~~v~-~~~~~~~li~~IpGNPG~~---gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 9 SGLPTSILTLKPWVT-KSGEDKPLIVWIPGNPGLL---GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT 84 (301)
T ss_pred cCCcccceeeeeeec-cCCCCceEEEEecCCCCch---hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc
Confidence 344444443444332 3446679999999888743 2332 2222222 22 2344443333332221111111111
Q ss_pred C-CcchHHHHHH-HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCC
Q 010654 318 K-KKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVP 375 (505)
Q Consensus 318 ~-~~~~~~D~~~-~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~ 375 (505)
. ..-..+|..+ -++++.+. .-...||.++|||-|+||++.++-.... .+..+++..|
T Consensus 85 ~~eifsL~~QV~HKlaFik~~-~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 85 NEEIFSLQDQVDHKLAFIKEY-VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred cccccchhhHHHHHHHHHHHh-CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 0 0112233322 23333332 2223689999999999999999873322 2344555555
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.55 E-value=3.3 Score=42.27 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=80.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
-.++++|++-.+ ..-..++. ....+.....++|+|+. +++... ...+.+.|+.+++..+.|..+.+++. ..+++
T Consensus 224 D~tiriwd~~~~-~~~~~~l~-gH~~~v~~~~f~p~g~~-i~Sgs~--D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 224 DKTLRIWDLKDD-GRNLKTLK-GHSTYVTSVAFSPDGNL-LVSGSD--DGTVRIWDVRTGECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred CceEEEeeccCC-CeEEEEec-CCCCceEEEEecCCCCE-EEEecC--CCcEEEEeccCCeEEEeeeccCCceEEEEECC
Confidence 356899998222 23444554 34556678899999954 444333 33477777777753455555554544 34899
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCce--EEEcCCCCc-eeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETT--VLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~-~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
||..|+-.+. + ..|.+.|+.+ +... -.+...... .+..+.++++..++..-... ..+.+|++.
T Consensus 299 d~~~l~s~s~-d----~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d-~~~~~w~l~ 364 (456)
T KOG0266|consen 299 DGNLLVSASY-D----GTIRVWDLET-GSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD-RTLKLWDLR 364 (456)
T ss_pred CCCEEEEcCC-C----ccEEEEECCC-CceeeeecccCCCCCCceeEEEECCCCcEEEEecCC-CeEEEEEcc
Confidence 9987765532 2 4788888876 3311 122222222 46777888886665544332 246677775
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.49 E-value=2.4 Score=39.51 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=40.4
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEE-eCCCCC--cee---eeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYL-DVSKPE--ELR---VLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~-d~~~~~--~~~---~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
-..+.|||||+|+...-..+.. +|-+ =-.+|. ++. .|..+..+.. +.||++.++++-.+.+ + ..+|+-.
T Consensus 232 ~~aavSP~GRFia~~gFTpDVk-VwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD-G--~wriwdt 307 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGFTPDVK-VWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD-G--KWRIWDT 307 (420)
T ss_pred cceeeCCCCcEEEEecCCCCce-EEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC-C--cEEEeec
Confidence 3578999999998775544322 3332 233343 222 2333333433 3489998887777654 3 2477655
Q ss_pred eC
Q 010654 108 PV 109 (505)
Q Consensus 108 ~~ 109 (505)
|+
T Consensus 308 dV 309 (420)
T KOG2096|consen 308 DV 309 (420)
T ss_pred cc
Confidence 54
|
|
| >KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.49 E-value=9.1 Score=38.64 Aligned_cols=96 Identities=11% Similarity=0.075 Sum_probs=58.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEE--EEEEeCCCcEEEEEeccc----cceEEEEEeCCCCCceeeeeccccce
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSL--GLQASESKKFLFIASESK----ITRFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~--~~~~SpDg~~i~~~~~~~----~~~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
-+++|.+||+.|+...+ -|...+..+.. -+.||-|+++++=...++ .....+++|..+-+ ..|+
T Consensus 280 e~~~l~IWDI~tG~lkr--sF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslk--------i~gI 349 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKR--SFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLK--------ISGI 349 (698)
T ss_pred CCceEEEEEccccchhc--ceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccC--------Cccc
Confidence 45789999999985433 34332222322 468999999987654432 22335555544322 1233
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.++|||-+.-|+|.+.....-..++-++.+-.
T Consensus 350 r~FswsP~~~llAYwtpe~~~~parvtL~evPs 382 (698)
T KOG2314|consen 350 RDFSWSPTSNLLAYWTPETNNIPARVTLMEVPS 382 (698)
T ss_pred cCcccCCCcceEEEEcccccCCcceEEEEecCc
Confidence 36699999999998865433234666666644
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=93.47 E-value=4.9 Score=39.13 Aligned_cols=142 Identities=10% Similarity=0.091 Sum_probs=81.3
Q ss_pred ceEEEEECCCCCCC-----CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecc-cccee
Q 010654 8 DKAWLHKLEADQSN-----DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPR-VVGVD 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~-----~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~-~~~~~ 80 (505)
+.+.+||+.....+ .+.+|.. +.+-.-+++|++-...++.+.. +...|.+.|+.++. ++....+. .....
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~-h~~~VeDV~~h~~h~~lF~sv~--dd~~L~iwD~R~~~~~~~~~~~ah~~~vn 276 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSG-HEDVVEDVAWHPLHEDLFGSVG--DDGKLMIWDTRSNTSKPSHSVKAHSAEVN 276 (422)
T ss_pred CcEEEEeccccccCCccccceEEeec-CCcceehhhccccchhhheeec--CCCeEEEEEcCCCCCCCcccccccCCcee
Confidence 45778888544332 2334432 2333346778887777665443 35667888877532 13222222 22222
Q ss_pred -EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCC
Q 010654 81 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 81 -~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
..|.|.+..|+-....+ ..|.+.|+......-..+....+ .+..+.|+++ .++.....++ ++.+|+++.-
T Consensus 277 ~~~fnp~~~~ilAT~S~D----~tV~LwDlRnL~~~lh~~e~H~d-ev~~V~WSPh~etvLASSg~D~--rl~vWDls~i 349 (422)
T KOG0264|consen 277 CVAFNPFNEFILATGSAD----KTVALWDLRNLNKPLHTFEGHED-EVFQVEWSPHNETVLASSGTDR--RLNVWDLSRI 349 (422)
T ss_pred EEEeCCCCCceEEeccCC----CcEEEeechhcccCceeccCCCc-ceEEEEeCCCCCceeEecccCC--cEEEEecccc
Confidence 23889888776665443 48999998764443324444445 4678999996 4554444444 5778888743
Q ss_pred CC
Q 010654 158 GE 159 (505)
Q Consensus 158 ~~ 159 (505)
|+
T Consensus 350 g~ 351 (422)
T KOG0264|consen 350 GE 351 (422)
T ss_pred cc
Confidence 33
|
|
| >KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.47 E-value=3 Score=41.84 Aligned_cols=117 Identities=10% Similarity=0.087 Sum_probs=69.1
Q ss_pred EEEEeCCCcEEEEEecccc---------ceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 36 GLQASESKKFLFIASESKI---------TRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~---------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
..-|-..|.+|++...++. +-+|+.++=..-. +..+--.+.-..+.|.|.|+++.+++......+-+.|.
T Consensus 398 kLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp-ve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~ 476 (698)
T KOG2314|consen 398 KLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP-VEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYA 476 (698)
T ss_pred EEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCC-ceeeecchheeeeeeccCCCeEEEEEccccccceeEEE
Confidence 3579999999999876532 3356666533321 22221111122355999999999998654444456676
Q ss_pred eeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcC
Q 010654 107 CPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~ 155 (505)
+.... ...+ ++..-.......+.|++.+ +++.........+..|+.+
T Consensus 477 ~e~~~-~~~~-lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 477 VETNI-KKPS-LVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred eecCC-Cchh-hhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence 66432 3333 4433333455678888864 4444444445678888876
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.25 Score=34.46 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=26.8
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCC-ccCCCCCCcEEEEEcCCCCcCC
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKN-LVKLDGSDPLLLYGYGSYEICN 277 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~-~~~~~~~~P~iv~~hGg~~~~~ 277 (505)
..+..|...+.+.||.-+...-+.++. .....++.|+|++.||-..++.
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~ 57 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD 57 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH
Confidence 367889999999999988776554444 1124466899999999876544
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.58 Score=44.81 Aligned_cols=153 Identities=15% Similarity=0.112 Sum_probs=72.7
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+.|+|+||.|+..+.+. .-.|| +..+=.-..+++.++..+.. .||++|.++ +..+.++ -|...+..- ..
T Consensus 101 ~v~WtPeGRRLltgs~SG-EFtLW--Ng~~fnFEtilQaHDs~Vr~m~ws~~g~wm-iSgD~gG----~iKyWqpnm-nn 171 (464)
T KOG0284|consen 101 VVRWTPEGRRLLTGSQSG-EFTLW--NGTSFNFETILQAHDSPVRTMKWSHNGTWM-ISGDKGG----MIKYWQPNM-NN 171 (464)
T ss_pred eEEEcCCCceeEeecccc-cEEEe--cCceeeHHHHhhhhcccceeEEEccCCCEE-EEcCCCc----eEEecccch-hh
Confidence 468999999987655443 22233 22221101223333333333 399998753 3333322 222222211 00
Q ss_pred ceEEEcCCCCceeeEEEEeC-CEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEE
Q 010654 115 TTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 193 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~-d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (505)
.. .+-......|.+++.++ |..++.+.+++.-+++-+.... ++..+....+.+....+.|.-+ +++
T Consensus 172 Vk-~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k-----------ee~vL~GHgwdVksvdWHP~kg-Lia 238 (464)
T KOG0284|consen 172 VK-IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK-----------EERVLRGHGWDVKSVDWHPTKG-LIA 238 (464)
T ss_pred hH-HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc-----------hhheeccCCCCcceeccCCccc-eeE
Confidence 11 11111122355666654 6888888888765544332221 1122234445555566666544 556
Q ss_pred EEecCCCCceEEEEECCCCc
Q 010654 194 HYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.+..+ -+-+.|+++++
T Consensus 239 sgskDn---lVKlWDprSg~ 255 (464)
T KOG0284|consen 239 SGSKDN---LVKLWDPRSGS 255 (464)
T ss_pred EccCCc---eeEeecCCCcc
Confidence 665554 34445665543
|
|
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.71 Score=49.49 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=38.2
Q ss_pred eEEEEEeCCCCCceeee-eccccceeEE-eeeeCCEEEE-EEcCCCCCCceEEEeeCCCCC
Q 010654 56 RFVFYLDVSKPEELRVL-TPRVVGVDTA-ASHRGNHFFI-TRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l-~~~~~~~~~~-~s~dg~~l~~-~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.+|.++|.++.. .+.+ +.....+... |||||++|+| ++-.+-.....||+.+|.+.+
T Consensus 329 ~~L~~~D~dG~n-~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~ 388 (912)
T TIGR02171 329 GNLAYIDYTKGA-SRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASG 388 (912)
T ss_pred CeEEEEecCCCC-ceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccC
Confidence 389999999886 6766 4433223223 9999999999 544431124579998887533
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.91 Score=43.21 Aligned_cols=110 Identities=13% Similarity=0.032 Sum_probs=58.7
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
.+.+++||||++|+- .+...+-++|=++..++ ......+..-+. ..|||||++|+=- .-.+.|.+.|.+..
T Consensus 118 Vl~~~fsp~g~~l~t-GsGD~TvR~WD~~TeTp--~~t~KgH~~WVlcvawsPDgk~iASG-----~~dg~I~lwdpktg 189 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLVT-GSGDTTVRLWDLDTETP--LFTCKGHKNWVLCVAWSPDGKKIASG-----SKDGSIRLWDPKTG 189 (480)
T ss_pred EEEEEecCCCceEEe-cCCCceEEeeccCCCCc--ceeecCCccEEEEEEECCCcchhhcc-----ccCCeEEEecCCCC
Confidence 456789999998752 22223345555555444 333333333343 3499999987622 22347777886652
Q ss_pred CC-ceEEEcCCCCceeeEEEEeCC------EEEEEEecCCeeEEEEEEcC
Q 010654 113 SE-TTVLIPHRESVKLQDIQLFID------HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 113 ~~-~~~~~~~~~~~~i~~~~~~~d------~l~~~~~~~~~~~l~~~~~~ 155 (505)
+. .+ .+..... .|..++|-+- +++....++|. +.++++.
T Consensus 190 ~~~g~-~l~gH~K-~It~Lawep~hl~p~~r~las~skDg~--vrIWd~~ 235 (480)
T KOG0271|consen 190 QQIGR-ALRGHKK-WITALAWEPLHLVPPCRRLASSSKDGS--VRIWDTK 235 (480)
T ss_pred Ccccc-cccCccc-ceeEEeecccccCCCccceecccCCCC--EEEEEcc
Confidence 11 11 2333322 3666777652 34444445543 4567654
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.19 Score=49.85 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=53.2
Q ss_pred CCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHH
Q 010654 280 AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359 (505)
Q Consensus 280 ~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~ 359 (505)
.|....+.|.+.||..- .+.+ +.+-+|+.+.. ....-+..+...++.+.+.. ..+|.|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~-~~l~---~~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRG-KDLF---AAPYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccC-CEEE---EEeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 46667788888888531 1111 11124443222 12234456666666665543 4799999999999999998
Q ss_pred HhhCCC------ceeEEEecCC
Q 010654 360 LNMRPD------LFKAAVAAVP 375 (505)
Q Consensus 360 ~~~~p~------~~~a~v~~~~ 375 (505)
+...+. .++..|+.++
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCC
Confidence 877643 3566666554
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.93 E-value=3 Score=42.09 Aligned_cols=142 Identities=15% Similarity=0.083 Sum_probs=82.6
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEe
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAA 83 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~ 83 (505)
-|...+..+|+...+..-. .+.+ ..+-..+..|++||++++ +....+.+++.|..+......++.+...+ ...|
T Consensus 277 sr~~~I~~~dvR~~~~~~~-~~~~-H~qeVCgLkws~d~~~lA---SGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~aw 351 (484)
T KOG0305|consen 277 SRDGKILNHDVRISQHVVS-TLQG-HRQEVCGLKWSPDGNQLA---SGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAW 351 (484)
T ss_pred cCCCcEEEEEEecchhhhh-hhhc-ccceeeeeEECCCCCeec---cCCCccceEeccCCCccccEEEeccceeeeEeee
Confidence 4667788888877653222 2222 233456889999999875 33445677888875543233444443222 2348
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecC-CeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREG-GLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~-~~~~l~~~~~~~ 156 (505)
+|.-..|.-... |.....|...+..+ +. . +-..+....|..+.|++..--++.+.+ ...++.+|+.++
T Consensus 352 cP~q~~lLAsGG--Gs~D~~i~fwn~~~-g~-~-i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps 420 (484)
T KOG0305|consen 352 CPWQSGLLATGG--GSADRCIKFWNTNT-GA-R-IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS 420 (484)
T ss_pred CCCccCceEEcC--CCcccEEEEEEcCC-Cc-E-ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc
Confidence 888776665542 33345777778764 32 2 222333446889999997633333322 334677887764
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=92.84 E-value=2 Score=40.47 Aligned_cols=74 Identities=14% Similarity=0.056 Sum_probs=48.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE----eeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA----ASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~----~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
++..+|+...+++...+. -..++++|..+++ ........++..++ ||+||++||-..++-......|-++|.+.
T Consensus 9 ~~a~~p~~~~avafaRRP-G~~~~v~D~~~g~-~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRP-GTFALVFDCRTGQ-LLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ceeeCCCCCeEEEEEeCC-CcEEEEEEcCCCc-eeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 456788555544433332 4568889999987 44333334454432 99999998888775444557899999873
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.17 Score=44.76 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=55.1
Q ss_pred cEEEEEcccCCCCCchh-HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC----C---
Q 010654 293 FIFAIAQIRGGGELGRQ-WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR----P--- 364 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~----p--- 364 (505)
..|+.|-||-..-+... -............+.|+.+|.++.+++-. +...+.|.|||.|+.+...++..+ |
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~ 124 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDPLRK 124 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCchHHh
Confidence 47899999866543221 01111112233678999999998777632 235799999999999999988664 1
Q ss_pred CceeEEEecCCchh
Q 010654 365 DLFKAAVAAVPFVD 378 (505)
Q Consensus 365 ~~~~a~v~~~~~~d 378 (505)
.++.|.+...+++.
T Consensus 125 rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 125 RLVAAYLIGYPVTV 138 (207)
T ss_pred hhheeeecCccccH
Confidence 24566666666654
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.34 Score=40.17 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
...+...++.+.++.. +.+|.+.|||.||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 4455566666655543 3789999999999988777654
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=92.65 E-value=7.5 Score=35.28 Aligned_cols=142 Identities=13% Similarity=0.044 Sum_probs=72.5
Q ss_pred eEEEEEeCCCCCceeeeec--cccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe
Q 010654 56 RFVFYLDVSKPEELRVLTP--RVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF 133 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 133 (505)
..|..+|+.+|+++....- ...+......++++.+++.+.. ..|+.+|..+ |+..|........ .......
T Consensus 3 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~l~~~d~~t-G~~~W~~~~~~~~-~~~~~~~ 75 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGD-----GNLYALDAKT-GKVLWRFDLPGPI-SGAPVVD 75 (238)
T ss_dssp SEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETT-----SEEEEEETTT-SEEEEEEECSSCG-GSGEEEE
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCC-----CEEEEEECCC-CCEEEEeeccccc-cceeeec
Confidence 3566677766652222111 1111111145688888888532 4899999877 7778855542221 1123556
Q ss_pred CCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 134 IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 134 ~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++.+++.. .++ +++.++..+ |...-.. .....+... .........+++.+++... ...++.+++.+|+
T Consensus 76 ~~~v~v~~-~~~--~l~~~d~~t-G~~~W~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 76 GGRVYVGT-SDG--SLYALDAKT-GKVLWSI---YLTSSPPAG-VRSSSSPAVDGDRLYVGTS----SGKLVALDPKTGK 143 (238)
T ss_dssp TTEEEEEE-TTS--EEEEEETTT-SCEEEEE---EE-SSCTCS-TB--SEEEEETTEEEEEET----CSEEEEEETTTTE
T ss_pred cccccccc-cee--eeEecccCC-cceeeee---ccccccccc-cccccCceEecCEEEEEec----cCcEEEEecCCCc
Confidence 67776666 333 677777543 4321100 000000000 0111122334665655544 6789999999998
Q ss_pred EEE
Q 010654 214 SVL 216 (505)
Q Consensus 214 ~~~ 216 (505)
..+
T Consensus 144 ~~w 146 (238)
T PF13360_consen 144 LLW 146 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
|
... |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.61 E-value=2.5 Score=40.35 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=52.6
Q ss_pred EEEEEeCCCCCce-eeeeccccce------eEEeeeeCCEEEEEEcC-----C--CCCCceEEEeeCCCCCCceEEEcCC
Q 010654 57 FVFYLDVSKPEEL-RVLTPRVVGV------DTAASHRGNHFFITRRS-----D--ELFNSELLACPVDNTSETTVLIPHR 122 (505)
Q Consensus 57 ~l~~~d~~~~~~~-~~l~~~~~~~------~~~~s~dg~~l~~~~~~-----~--~~~~~~l~~~~~~~~~~~~~~~~~~ 122 (505)
.+++++.+++. . +.+.....+. +.-+.||| .+||.+.. . ..+...||+++..+ +..+ ++..+
T Consensus 86 g~~~~~~~~~~-~~t~~~~~~~~~~~~r~ND~~v~pdG-~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g-~~~~-l~~~~ 161 (307)
T COG3386 86 GVRLLDPDTGG-KITLLAEPEDGLPLNRPNDGVVDPDG-RIWFGDMGYFDLGKSEERPTGSLYRVDPDG-GVVR-LLDDD 161 (307)
T ss_pred ccEEEeccCCc-eeEEeccccCCCCcCCCCceeEcCCC-CEEEeCCCccccCccccCCcceEEEEcCCC-CEEE-eecCc
Confidence 36677766664 4 4444333221 22377886 46776655 1 12446899999754 3333 44433
Q ss_pred CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 123 ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 123 ~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.. ...+++|++|...+++.+-...+++.|+++
T Consensus 162 ~~-~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 162 LT-IPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred EE-ecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 22 235789999864444444444567777765
|
|
| >KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=92.58 E-value=9.9 Score=36.30 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=76.2
Q ss_pred eEEEEEeCCCCCceeee--e-ccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE
Q 010654 56 RFVFYLDVSKPEELRVL--T-PRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ 131 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l--~-~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 131 (505)
..+|++|+.+.+-+..+ + +...|. ..++++.+.+++|-...+ .+.++++|+.+..... .+.... ..+..++
T Consensus 106 e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t---~GdV~l~d~~nl~~v~-~I~aH~-~~lAala 180 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT---SGDVVLFDTINLQPVN-TINAHK-GPLAALA 180 (391)
T ss_pred ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCC---CceEEEEEcccceeee-EEEecC-CceeEEE
Confidence 35999999987622222 1 222232 233566667888876553 4689999987643333 444333 3477888
Q ss_pred EeCCEEEE-EEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEE
Q 010654 132 LFIDHLAV-YEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYD 208 (505)
Q Consensus 132 ~~~d~l~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 208 (505)
.+.++-.+ ++.+.| .-++++.++. |..+.+.-.|.. +- .+-..++++++.. +.+++-+.--.+|.++
T Consensus 181 fs~~G~llATASeKG-TVIRVf~v~~-G~kl~eFRRG~~---~~---~IySL~Fs~ds~~--L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 181 FSPDGTLLATASEKG-TVIRVFSVPE-GQKLYEFRRGTY---PV---SIYSLSFSPDSQF--LAASSNTETVHIFKLE 248 (391)
T ss_pred ECCCCCEEEEeccCc-eEEEEEEcCC-ccEeeeeeCCce---ee---EEEEEEECCCCCe--EEEecCCCeEEEEEec
Confidence 88875444 455555 4577888763 443333321111 11 1223456777773 3455555445566654
|
|
| >PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4 | Back alignment and domain information |
|---|
Probab=92.53 E-value=2.1 Score=32.25 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=45.9
Q ss_pred EEEEeCCCcEEEEEeccc---------------cceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCC
Q 010654 36 GLQASESKKFLFIASESK---------------ITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDEL 99 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~---------------~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~ 99 (505)
++++.+|+..|+|+..+. .+.+|+.+|.++++ .+.|....... -..+|+|++.+++....
T Consensus 2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~-~~vl~~~L~fpNGVals~d~~~vlv~Et~--- 77 (89)
T PF03088_consen 2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKE-TTVLLDGLYFPNGVALSPDESFVLVAETG--- 77 (89)
T ss_dssp EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTE-EEEEEEEESSEEEEEE-TTSSEEEEEEGG---
T ss_pred ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCe-EEEehhCCCccCeEEEcCCCCEEEEEecc---
Confidence 356778866788885542 25799999999996 77776544221 13489999998888754
Q ss_pred CCceEEEeeCCC
Q 010654 100 FNSELLACPVDN 111 (505)
Q Consensus 100 ~~~~l~~~~~~~ 111 (505)
..||.++-+++
T Consensus 78 -~~Ri~rywl~G 88 (89)
T PF03088_consen 78 -RYRILRYWLKG 88 (89)
T ss_dssp -GTEEEEEESSS
T ss_pred -CceEEEEEEeC
Confidence 35898888765
|
3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B. |
| >KOG1274 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.39 E-value=3.7 Score=43.68 Aligned_cols=123 Identities=14% Similarity=0.071 Sum_probs=72.3
Q ss_pred CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeeccccce------eEEeeeeCCEEEE
Q 010654 22 DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGV------DTAASHRGNHFFI 92 (505)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~------~~~~s~dg~~l~~ 92 (505)
.+.++++.+.. ...+...|.|.+|++... +..|+++|++++. .+.-+.+..+.. ...|+|+|++|++
T Consensus 130 ~~~~lrgh~ap-Vl~l~~~p~~~fLAvss~---dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~ 205 (933)
T KOG1274|consen 130 QEKVLRGHDAP-VLQLSYDPKGNFLAVSSC---DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV 205 (933)
T ss_pred hheeecccCCc-eeeeeEcCCCCEEEEEec---CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe
Confidence 33444443332 335678999998887654 3468899998886 233333443322 1349999999988
Q ss_pred EEcCCCCCCceEEEeeCCCCCCceEEEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 93 TRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
...++ -+.+++..+ .+....+..+ ....+..+.|++.+.|+++..- ..++.+|+++
T Consensus 206 ~~~d~-----~Vkvy~r~~-we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~-~g~I~vWnv~ 262 (933)
T KOG1274|consen 206 PPVDN-----TVKVYSRKG-WELQFKLRDKLSSSKFSDLQWSPNGKYIAASTL-DGQILVWNVD 262 (933)
T ss_pred eccCC-----eEEEEccCC-ceeheeecccccccceEEEEEcCCCcEEeeecc-CCcEEEEecc
Confidence 87652 455555544 2222122222 2223778899998877775432 1356777776
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=91.99 E-value=4.9 Score=39.11 Aligned_cols=139 Identities=12% Similarity=0.123 Sum_probs=80.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~s~ 85 (505)
.+|.+||+++.+.+............. .++|.|=+.+|+.+.+. ...|.+.|+.+-. .+..+....+.+. ..|||
T Consensus 250 ~~L~iwD~R~~~~~~~~~~~ah~~~vn-~~~fnp~~~~ilAT~S~--D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP 326 (422)
T KOG0264|consen 250 GKLMIWDTRSNTSKPSHSVKAHSAEVN-CVAFNPFNEFILATGSA--DKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP 326 (422)
T ss_pred CeEEEEEcCCCCCCCcccccccCCcee-EEEeCCCCCceEEeccC--CCcEEEeechhcccCceeccCCCcceEEEEeCC
Confidence 579999998643333333332222222 45788988887766543 3457778877654 1233333332222 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCc-----------eEEEcCCC-CceeeEEEEeCC--EEEEEEecCCeeEEEE
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSET-----------TVLIPHRE-SVKLQDIQLFID--HLAVYEREGGLQKITT 151 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~-~~~i~~~~~~~d--~l~~~~~~~~~~~l~~ 151 (505)
+.+.+.-.+..+ .+|.+.|+..-+++ ..++.+.. -..+.+++|.+. .++..+.++. .|.+
T Consensus 327 h~etvLASSg~D----~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN--~LqI 400 (422)
T KOG0264|consen 327 HNETVLASSGTD----RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDN--ILQI 400 (422)
T ss_pred CCCceeEecccC----CcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCc--eEEE
Confidence 999988776543 48888887542222 22344433 235678999886 4555555553 4556
Q ss_pred EEcC
Q 010654 152 YRLP 155 (505)
Q Consensus 152 ~~~~ 155 (505)
++..
T Consensus 401 W~~s 404 (422)
T KOG0264|consen 401 WQMA 404 (422)
T ss_pred eecc
Confidence 6654
|
|
| >KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=91.97 E-value=7.3 Score=37.17 Aligned_cols=135 Identities=11% Similarity=0.075 Sum_probs=76.5
Q ss_pred eEEEEECCCCCCCCeEEEE---e--cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee--E
Q 010654 9 KAWLHKLEADQSNDICLYH---E--KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--T 81 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~---~--~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~ 81 (505)
.+|+||+.+= .+++ . +++.=......+..+.++++-. +.+..+|++.|+.+-+ .....+..++.. .
T Consensus 107 ~IyIydI~~M-----klLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~-s~t~GdV~l~d~~nl~-~v~~I~aH~~~lAal 179 (391)
T KOG2110|consen 107 SIYIYDIKDM-----KLLHTIETTPPNPKGLCALSPNNANCYLAYPG-STTSGDVVLFDTINLQ-PVNTINAHKGPLAAL 179 (391)
T ss_pred cEEEEecccc-----eeehhhhccCCCccceEeeccCCCCceEEecC-CCCCceEEEEEcccce-eeeEEEecCCceeEE
Confidence 4888988542 2222 1 2222234555667777888763 3357899999988765 332223333433 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC-CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.|++||..|+=-++. | . -|-++.+.+ |..-..+-..- -..|-+++.++|.-++++..+. ..++++.++.
T Consensus 180 afs~~G~llATASeK-G-T--VIRVf~v~~-G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T-eTVHiFKL~~ 249 (391)
T KOG2110|consen 180 AFSPDGTLLATASEK-G-T--VIRVFSVPE-GQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT-ETVHIFKLEK 249 (391)
T ss_pred EECCCCCEEEEeccC-c-e--EEEEEEcCC-ccEeeeeeCCceeeEEEEEEECCCCCeEEEecCC-CeEEEEEecc
Confidence 499999988866654 2 2 233334433 21111222211 2356788888988777776654 3478888763
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=91.82 E-value=13 Score=35.77 Aligned_cols=167 Identities=13% Similarity=-0.018 Sum_probs=79.5
Q ss_pred ceEEEEEEeCCCcEEEEEecc------ccceE-EEEEeCCCCC-ceeeeecc---cc-c---eeEEeeeeCCEEEEEEcC
Q 010654 32 IYSLGLQASESKKFLFIASES------KITRF-VFYLDVSKPE-ELRVLTPR---VV-G---VDTAASHRGNHFFITRRS 96 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~------~~~~~-l~~~d~~~~~-~~~~l~~~---~~-~---~~~~~s~dg~~l~~~~~~ 96 (505)
.|...+..||||+.++....- ..+++ |-+.|..+-. ......|. .. . ....+|.||+++++..-.
T Consensus 36 g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~T 115 (342)
T PF06433_consen 36 GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFT 115 (342)
T ss_dssp ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEES
T ss_pred ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccC
Confidence 345567889999998765421 13444 4456888764 12222222 11 1 123489999998888654
Q ss_pred CCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCe
Q 010654 97 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 176 (505)
Q Consensus 97 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (505)
|...+-++|++...... .+. .++ +..-+-+.+++ +.....+|. +..+.++.+|+..+.. ..+=.++..
T Consensus 116 ---Pa~SVtVVDl~~~kvv~-ei~-~PG-C~~iyP~~~~~-F~~lC~DGs--l~~v~Ld~~Gk~~~~~---t~~F~~~~d 183 (342)
T PF06433_consen 116 ---PATSVTVVDLAAKKVVG-EID-TPG-CWLIYPSGNRG-FSMLCGDGS--LLTVTLDADGKEAQKS---TKVFDPDDD 183 (342)
T ss_dssp ---SSEEEEEEETTTTEEEE-EEE-GTS-EEEEEEEETTE-EEEEETTSC--EEEEEETSTSSEEEEE---EEESSTTTS
T ss_pred ---CCCeEEEEECCCCceee-eec-CCC-EEEEEecCCCc-eEEEecCCc--eEEEEECCCCCEeEee---ccccCCCCc
Confidence 55689999998621111 111 112 22233334455 334444443 3445566556532110 011111110
Q ss_pred eeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 177 YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
..+.....+..++.++|. +--..+|.+++.+...
T Consensus 184 p~f~~~~~~~~~~~~~F~----Sy~G~v~~~dlsg~~~ 217 (342)
T PF06433_consen 184 PLFEHPAYSRDGGRLYFV----SYEGNVYSADLSGDSA 217 (342)
T ss_dssp -B-S--EEETTTTEEEEE----BTTSEEEEEEETTSSE
T ss_pred ccccccceECCCCeEEEE----ecCCEEEEEeccCCcc
Confidence 011111112344555552 2336788888876653
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.34 Score=49.34 Aligned_cols=67 Identities=10% Similarity=0.163 Sum_probs=47.0
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcCCC-----CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMKTD-----DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.+|+.||..|..||+..+..+++++.+.-.. -+++.|-..||.+|...-.-....+.+..+.+|.++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 5999999999999999999999999775321 234444444499995432222334555568888876
|
It also includes several bacterial homologues of unknown function. |
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.30 E-value=16 Score=35.85 Aligned_cols=135 Identities=11% Similarity=0.135 Sum_probs=71.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE---Eee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT---AAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~---~~s 84 (505)
..+++|..+.... ..+....+.. .-.....|.|.|++..++... .-.-|..++......+....++.+ .|.
T Consensus 283 ~~i~vws~~~~s~--~~~~~~h~~~-V~~ls~h~tgeYllsAs~d~~---w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 283 EIIRVWSVPLSSE--PTSSRPHEEP-VTGLSLHPTGEYLLSASNDGT---WAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred ceEEeeccccccC--cccccccccc-ceeeeeccCCcEEEEecCCce---EEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 3467777766432 2222211111 123456788888776555431 222355555423333332222333 399
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
||| ++|-+. .+.+.|-.+|+....... -++.. ...+..+..+.++-+++...+... +.+||+..
T Consensus 357 pDg--Lifgtg---t~d~~vkiwdlks~~~~a-~Fpgh-t~~vk~i~FsENGY~Lat~add~~-V~lwDLRK 420 (506)
T KOG0289|consen 357 PDG--LIFGTG---TPDGVVKIWDLKSQTNVA-KFPGH-TGPVKAISFSENGYWLATAADDGS-VKLWDLRK 420 (506)
T ss_pred CCc--eEEecc---CCCceEEEEEcCCccccc-cCCCC-CCceeEEEeccCceEEEEEecCCe-EEEEEehh
Confidence 997 344432 234588888987633222 34443 335888999988766665544322 78898863
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.27 E-value=5.5 Score=40.62 Aligned_cols=113 Identities=13% Similarity=0.125 Sum_probs=64.5
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeC-CCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDV-SKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~-~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
...+..|||||++|+ ... ....|++.|+ +.+..++.+..+...+. ..|+|+| .+++....++ -+.+.|+.
T Consensus 205 ~v~~~~fs~d~~~l~-s~s--~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~----tvriWd~~ 276 (456)
T KOG0266|consen 205 GVSDVAFSPDGSYLL-SGS--DDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDG----TVRIWDVR 276 (456)
T ss_pred ceeeeEECCCCcEEE-Eec--CCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCC----cEEEEecc
Confidence 344789999999653 222 2345666777 33333566655543332 2399999 5666655432 45666776
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+ ++..-.+....+ .+..++..++.-+++... ....+.+|++.+
T Consensus 277 ~-~~~~~~l~~hs~-~is~~~f~~d~~~l~s~s-~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 277 T-GECVRKLKGHSD-GISGLAFSPDGNLLVSAS-YDGTIRVWDLET 319 (456)
T ss_pred C-CeEEEeeeccCC-ceEEEEECCCCCEEEEcC-CCccEEEEECCC
Confidence 5 333224443333 477777777754444332 234578898764
|
|
| >KOG2048 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.17 E-value=4.8 Score=41.37 Aligned_cols=137 Identities=14% Similarity=0.207 Sum_probs=78.1
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceE---EEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeeccc-cce
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYS---LGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRV-VGV 79 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~---~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~-~~~ 79 (505)
+++++.+++|.... ......-.+.+... ....+|-|+..+++.+ .+..+|...+++++. +...+++.. .+.
T Consensus 401 t~~~~~iy~L~~~~-~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s--~~~~~le~~el~~ps~kel~~~~~~~~~~~ 477 (691)
T KOG2048|consen 401 TVSRTKIYRLQPDP-NVKVINVDDVPLALLDASAISFTIDKNKLFLVS--KNIFSLEEFELETPSFKELKSIQSQAKCPS 477 (691)
T ss_pred eccceEEEEeccCc-ceeEEEeccchhhhccceeeEEEecCceEEEEe--cccceeEEEEecCcchhhhhccccccCCCc
Confidence 45677777776543 11111112222222 2345788888888776 334567777777765 333344331 121
Q ss_pred --eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE---EeCCEEEEEEecCCeeEEEEEEc
Q 010654 80 --DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ---LFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 80 --~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
....|+||++|+..+.. ..++.+++++ .+..|+. ...+..+.... +..+++++.... .|++-|++
T Consensus 478 I~~l~~SsdG~yiaa~~t~-----g~I~v~nl~~-~~~~~l~-~rln~~vTa~~~~~~~~~~lvvats~---nQv~efdi 547 (691)
T KOG2048|consen 478 ISRLVVSSDGNYIAAISTR-----GQIFVYNLET-LESHLLK-VRLNIDVTAAAFSPFVRNRLVVATSN---NQVFEFDI 547 (691)
T ss_pred ceeEEEcCCCCEEEEEecc-----ceEEEEEccc-ceeecch-hccCcceeeeeccccccCcEEEEecC---CeEEEEec
Confidence 23489999999999854 4899999987 5555433 22223343333 333466665444 35777777
Q ss_pred C
Q 010654 155 P 155 (505)
Q Consensus 155 ~ 155 (505)
+
T Consensus 548 ~ 548 (691)
T KOG2048|consen 548 E 548 (691)
T ss_pred c
Confidence 4
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.16 E-value=8.8 Score=38.82 Aligned_cols=178 Identities=11% Similarity=0.046 Sum_probs=89.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee----------------
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---------------- 71 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---------------- 71 (505)
.-||+|+--++ +...+++. +.+...++.|++||++|++-.... .+.++|....+..+.
T Consensus 197 ~~vylW~~~s~--~v~~l~~~-~~~~vtSv~ws~~G~~LavG~~~g---~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~ 270 (484)
T KOG0305|consen 197 QSVYLWSASSG--SVTELCSF-GEELVTSVKWSPDGSHLAVGTSDG---TVQIWDVKEQKKTRTLRGSHASRVGSLAWNS 270 (484)
T ss_pred ceEEEEecCCC--ceEEeEec-CCCceEEEEECCCCCEEEEeecCC---eEEEEehhhccccccccCCcCceeEEEeccC
Confidence 35899997664 34455543 244566889999999998875432 233333222110000
Q ss_pred --------------------------eecc-ccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC
Q 010654 72 --------------------------LTPR-VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES 124 (505)
Q Consensus 72 --------------------------l~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 124 (505)
+..+ ++-.-..|++|+++++=-. ....+++.|... ..+...+.....
T Consensus 271 ~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGg-----nDN~~~Iwd~~~-~~p~~~~~~H~a 344 (484)
T KOG0305|consen 271 SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGG-----NDNVVFIWDGLS-PEPKFTFTEHTA 344 (484)
T ss_pred ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCC-----CccceEeccCCC-ccccEEEeccce
Confidence 0000 0001123788877665222 224777777643 122222333222
Q ss_pred ceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc
Q 010654 125 VKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 125 ~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
.+-.++|.+- .++.+..-..-.++.+++..+ |..+..+-++- .|-.+.+++..+.++.+......--
T Consensus 345 -AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~-g~~i~~vdtgs---------QVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 345 -AVKALAWCPWQSGLLATGGGSADRCIKFWNTNT-GARIDSVDTGS---------QVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred -eeeEeeeCCCccCceEEcCCCcccEEEEEEcCC-CcEecccccCC---------ceeeEEEcCCCCEEEEecCCCCCcE
Confidence 3567777774 444443322234677888653 43332221111 1333556777777776666555544
Q ss_pred eEEEEE
Q 010654 203 SVYDYD 208 (505)
Q Consensus 203 ~~~~~~ 208 (505)
.||.+.
T Consensus 414 ~lw~~p 419 (484)
T KOG0305|consen 414 TLWKYP 419 (484)
T ss_pred EEEecc
Confidence 555553
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=90.98 E-value=1.7 Score=40.44 Aligned_cols=103 Identities=19% Similarity=0.251 Sum_probs=43.2
Q ss_pred CCCcEEEEEcCCCCcCCCC-CCchhHHHHHHC---CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDP-AFNSSRLSLLDR---GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIK 335 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~-~~~~~~~~l~~~---G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~ 335 (505)
.+.| ||+.||-..+...+ ++. ....+.++ |..|..++. |.+.. .+ .. .... ..+.+..+.+ +.+.+
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~-~i~~~i~~~~PG~yV~si~i-g~~~~-~D-~~--~s~f--~~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMG-SIKELIEEQHPGTYVHSIEI-GNDPS-ED-VE--NSFF--GNVNDQVEQVCEQLAN 74 (279)
T ss_dssp SS---EEEE--TT--S--TTTHH-HHHHHHHHHSTT--EEE--S-SSSHH-HH-HH--HHHH--SHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEcCccccCChhHHH-HHHHHHHHhCCCceEEEEEE-CCCcc-hh-hh--hhHH--HHHHHHHHHHHHHHhh
Confidence 3445 45559975444332 222 23444443 766777664 22211 00 00 0001 2233333333 33444
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCC-ceeEEEec
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAA 373 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~ 373 (505)
.+... +-+-++|+|.||.++=.++.+.++ .++-.|+.
T Consensus 75 ~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 75 DPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp -GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred Chhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 33332 568899999999998888887765 35555554
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=90.95 E-value=5 Score=41.92 Aligned_cols=142 Identities=12% Similarity=0.088 Sum_probs=77.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
...|++|.+.|++--+ ++.+.... ..+...+|+|..|+ +.+...+-++|-+=-..+. ...+.-..+.....|+||
T Consensus 457 ~F~IfvWS~qTGqllD--iLsGHEgP-Vs~l~f~~~~~~La-S~SWDkTVRiW~if~s~~~-vEtl~i~sdvl~vsfrPd 531 (893)
T KOG0291|consen 457 SFEIFVWSVQTGQLLD--ILSGHEGP-VSGLSFSPDGSLLA-SGSWDKTVRIWDIFSSSGT-VETLEIRSDVLAVSFRPD 531 (893)
T ss_pred eEEEEEEEeecCeeee--hhcCCCCc-ceeeEEccccCeEE-eccccceEEEEEeeccCce-eeeEeeccceeEEEEcCC
Confidence 4579999999986433 44433222 23556899998654 3332233466666555554 555554444445669999
Q ss_pred CCEEEEEEcCC------CCCCceEEEee----CCCCCCce-EEEcCC---CCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 87 GNHFFITRRSD------ELFNSELLACP----VDNTSETT-VLIPHR---ESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 87 g~~l~~~~~~~------~~~~~~l~~~~----~~~~~~~~-~~~~~~---~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
|+.|++.+-++ .....++..+| +.+ |... -.++.. ....+..++.+.|+-++.+.-. ...+.+|
T Consensus 532 G~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~-gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~-sn~iCiY 609 (893)
T KOG0291|consen 532 GKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSG-GRKETDRITAENSAKGKTFTTICYSADGKCILAGGE-SNSICIY 609 (893)
T ss_pred CCeEEEEEecceEEEEEhhhceeeccccchhhccc-cccccceeehhhcccCCceEEEEEcCCCCEEEecCC-cccEEEE
Confidence 99999998652 01122332222 111 1111 022222 1234667788887655544322 2347888
Q ss_pred EcC
Q 010654 153 RLP 155 (505)
Q Consensus 153 ~~~ 155 (505)
++.
T Consensus 610 ~v~ 612 (893)
T KOG0291|consen 610 DVP 612 (893)
T ss_pred ECc
Confidence 876
|
|
| >KOG1273 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.84 E-value=5.2 Score=37.32 Aligned_cols=106 Identities=10% Similarity=0.054 Sum_probs=52.0
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
+-+|.+||+-|-.. -.++... -.=..+..||+|||.|+-++. ...+-+.|+..|.-++++.-.. -+. ..|.|
T Consensus 44 nG~vvI~D~~T~~i--ar~lsaH-~~pi~sl~WS~dgr~LltsS~---D~si~lwDl~~gs~l~rirf~s-pv~~~q~hp 116 (405)
T KOG1273|consen 44 NGRVVIYDFDTFRI--ARMLSAH-VRPITSLCWSRDGRKLLTSSR---DWSIKLWDLLKGSPLKRIRFDS-PVWGAQWHP 116 (405)
T ss_pred CCcEEEEEccccch--hhhhhcc-ccceeEEEecCCCCEeeeecC---CceeEEEeccCCCceeEEEccC-ccceeeecc
Confidence 34677888766421 1222211 111346799999999764322 2346667777765122222111 112 23777
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV 125 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 125 (505)
......+.+-... .-+++++.. .... +++.+.+.
T Consensus 117 ~k~n~~va~~~~~----sp~vi~~s~-~~h~-~Lp~d~d~ 150 (405)
T KOG1273|consen 117 RKRNKCVATIMEE----SPVVIDFSD-PKHS-VLPKDDDG 150 (405)
T ss_pred ccCCeEEEEEecC----CcEEEEecC-Ccee-eccCCCcc
Confidence 6665555554422 234455543 2333 55554443
|
|
| >KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=90.70 E-value=17 Score=36.74 Aligned_cols=112 Identities=8% Similarity=0.027 Sum_probs=66.6
Q ss_pred EEEEEeCCCcEEEEEecc-c--------cceEEEEEeCCCCCceeeeecccccee--EEeeeeCCEEEEEEcCCCCCCce
Q 010654 35 LGLQASESKKFLFIASES-K--------ITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSE 103 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~-~--------~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~ 103 (505)
+...|.+-|.-|++.... . ..+.||+++.+ |. -..+.-...|.. +.|+|+|+.+.+...-- + ..
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~-s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfM--P-Ak 295 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GE-SVSVPLLKEGPVHDVTWSPSGREFAVVYGFM--P-AK 295 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-Cc-eEEEecCCCCCceEEEECCCCCEEEEEEecc--c-ce
Confidence 356799999887776543 2 24689999998 33 222222223433 45999999998887432 2 46
Q ss_pred EEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCC
Q 010654 104 LLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+-.+|+.+ .....+++.+.. .+-+++ +-++++.--|-...+.+||+..
T Consensus 296 vtifnlr~--~~v~df~egpRN---~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n 345 (566)
T KOG2315|consen 296 VTIFNLRG--KPVFDFPEGPRN---TAFFNPHGNIILLAGFGNLPGDMEVWDVPN 345 (566)
T ss_pred EEEEcCCC--CEeEeCCCCCcc---ceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence 77778764 332244444433 333444 3444444445566788999863
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=90.49 E-value=17 Score=34.80 Aligned_cols=152 Identities=13% Similarity=0.141 Sum_probs=84.9
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
++.+|+.++ +.+....+. -|+.++.+|..+-.++.+.+.+. ..||+||..|+ .... .++|.+....+ +..
T Consensus 70 vsl~P~~~l-~aTGGgDD~--AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLA-TGdm----sG~v~v~~~st-g~~ 140 (399)
T KOG0296|consen 70 VSLHPNNNL-VATGGGDDL--AFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLA-TGDM----SGKVLVFKVST-GGE 140 (399)
T ss_pred EEeCCCCce-EEecCCCce--EEEEEccCCcceeEecCCCCceEEEEEccCceEEE-ecCC----CccEEEEEccc-Cce
Confidence 456785543 444333333 45556666653555665554443 34999997554 2222 24788888776 667
Q ss_pred eEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEE
Q 010654 116 TVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFH 194 (505)
Q Consensus 116 ~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (505)
+|.+... -..|..+.|-+. .++++-..+| .++.|+++.. +..+ .++...-....-.+.|+|++++..
T Consensus 141 ~~~~~~e-~~dieWl~WHp~a~illAG~~DG--svWmw~ip~~-~~~k--------v~~Gh~~~ct~G~f~pdGKr~~tg 208 (399)
T KOG0296|consen 141 QWKLDQE-VEDIEWLKWHPRAHILLAGSTDG--SVWMWQIPSQ-ALCK--------VMSGHNSPCTCGEFIPDGKRILTG 208 (399)
T ss_pred EEEeecc-cCceEEEEecccccEEEeecCCC--cEEEEECCCc-ceee--------EecCCCCCcccccccCCCceEEEE
Confidence 7855422 224677777776 4555555555 4789998742 2111 111211112223456788877655
Q ss_pred EecCCCCceEEEEECCCCc
Q 010654 195 YSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~ 213 (505)
+. -..|...+++++.
T Consensus 209 y~----dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 209 YD----DGTIIVWNPKTGQ 223 (399)
T ss_pred ec----CceEEEEecCCCc
Confidence 54 3566777777775
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=90.37 E-value=1.9 Score=44.74 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=53.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--Eeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~ 85 (505)
+.|-+||+-++ ..+++|.+... -....+.||+|++|+- ......|.++|+.++..+..+..+ .+..+ .||.
T Consensus 557 ~tVRlWDv~~G--~~VRiF~GH~~-~V~al~~Sp~Gr~LaS---g~ed~~I~iWDl~~~~~v~~l~~H-t~ti~SlsFS~ 629 (707)
T KOG0263|consen 557 RTVRLWDVSTG--NSVRIFTGHKG-PVTALAFSPCGRYLAS---GDEDGLIKIWDLANGSLVKQLKGH-TGTIYSLSFSR 629 (707)
T ss_pred ceEEEEEcCCC--cEEEEecCCCC-ceEEEEEcCCCceEee---cccCCcEEEEEcCCCcchhhhhcc-cCceeEEEEec
Confidence 35778888775 46889976433 2446789999999863 233456888999987633344444 34443 4999
Q ss_pred eCCEEEEEE
Q 010654 86 RGNHFFITR 94 (505)
Q Consensus 86 dg~~l~~~~ 94 (505)
||.-|+.-+
T Consensus 630 dg~vLasgg 638 (707)
T KOG0263|consen 630 DGNVLASGG 638 (707)
T ss_pred CCCEEEecC
Confidence 998776544
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.5 Score=39.98 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=20.7
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCC
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p 364 (505)
...+|.++|||+||.++..++....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3478999999999999988877644
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.14 E-value=8.1 Score=34.92 Aligned_cols=128 Identities=14% Similarity=0.112 Sum_probs=71.1
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee--cccccee-EEeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVVGVD-TAASH 85 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~--~~~~~~~-~~~s~ 85 (505)
.|.+||..|+.. ...|.-..+ .-+...|+||++|.+.-.+ .|-..|..+-. +|. ....++. .+.+|
T Consensus 166 tVRLWD~rTgt~-v~sL~~~s~---VtSlEvs~dG~ilTia~gs----sV~Fwdaksf~---~lKs~k~P~nV~SASL~P 234 (334)
T KOG0278|consen 166 TVRLWDHRTGTE-VQSLEFNSP---VTSLEVSQDGRILTIAYGS----SVKFWDAKSFG---LLKSYKMPCNVESASLHP 234 (334)
T ss_pred ceEEEEeccCcE-EEEEecCCC---CcceeeccCCCEEEEecCc----eeEEecccccc---ceeeccCccccccccccC
Confidence 356677777632 222322111 2256789999998776443 35556665432 222 1122222 34788
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEE-EecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~-~~~~~~~~l~~~~~~ 155 (505)
+. .+++.... ...+|.+|-.+ |++.-..-......+..+..++|+.+++ -.++|.- .+|...
T Consensus 235 ~k-~~fVaGge----d~~~~kfDy~T-geEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi--rlWQt~ 297 (334)
T KOG0278|consen 235 KK-EFFVAGGE----DFKVYKFDYNT-GEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI--RLWQTT 297 (334)
T ss_pred CC-ceEEecCc----ceEEEEEeccC-CceeeecccCCCCceEEEEECCCCceeeccCCCceE--EEEEec
Confidence 76 55555433 36899999876 5443232223344677888999976655 4566654 445543
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=90.09 E-value=3.8 Score=38.58 Aligned_cols=100 Identities=16% Similarity=0.081 Sum_probs=52.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.+.|+|| .||-......+++....+.+.+. |.-+..+. .|.+. . ...-....+.+..+.+.|.+.+..
T Consensus 25 ~~~PvVi-wHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~----~s~~~~~~~Qv~~vce~l~~~~~L 93 (306)
T PLN02606 25 LSVPFVL-FHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----Q----DSLFMPLRQQASIACEKIKQMKEL 93 (306)
T ss_pred CCCCEEE-ECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----c----cccccCHHHHHHHHHHHHhcchhh
Confidence 3456554 59976444444555545555423 66444443 33211 0 011011223333344444443333
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEe
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVA 372 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~ 372 (505)
.+-+-++|+|.||.++=.++.+.|+ .++-.|+
T Consensus 94 -~~G~naIGfSQGglflRa~ierc~~~p~V~nlIS 127 (306)
T PLN02606 94 -SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVS 127 (306)
T ss_pred -cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEE
Confidence 2458899999999999888888766 2444443
|
|
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.45 E-value=18 Score=33.75 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=83.5
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCC-------------
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDEL------------- 99 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~------------- 99 (505)
..+...|+||..++..+. ...|.++|..+++..+.+....-|.+. .|.++...++..++....
T Consensus 17 i~sl~fs~~G~~litss~---dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkyl 93 (311)
T KOG1446|consen 17 INSLDFSDDGLLLITSSE---DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYL 93 (311)
T ss_pred eeEEEecCCCCEEEEecC---CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceE
Confidence 346788999998776332 335777888887645555444344443 255555555555542110
Q ss_pred -----CCceEEEeeCCCCCCceEEEcCCCCcee-------------------eEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 100 -----FNSELLACPVDNTSETTVLIPHRESVKL-------------------QDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 100 -----~~~~l~~~~~~~~~~~~~~~~~~~~~~i-------------------~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
-..++..+.+.- .... .+....|..+ .-.+.++.+++|+...++. .+.+|++.
T Consensus 94 RYF~GH~~~V~sL~~sP-~~d~-FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~-~IkLyD~R 170 (311)
T KOG1446|consen 94 RYFPGHKKRVNSLSVSP-KDDT-FLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSE-LIKLYDLR 170 (311)
T ss_pred EEcCCCCceEEEEEecC-CCCe-EEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCC-eEEEEEec
Confidence 011222222211 1111 1111111111 1234566788888776654 78889876
Q ss_pred C-CCCcccccCCCceeeccCCe-eeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 156 A-VGEPLKSLQGGKSVEFIDPV-YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 156 ~-~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. +.++- ..+.++.+. -.+..+.+|+||+.++++.+ -..++++|.=+|.
T Consensus 171 s~dkgPF------~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~----~s~~~~lDAf~G~ 220 (311)
T KOG1446|consen 171 SFDKGPF------TTFSITDNDEAEWTDLEFSPDGKSILLSTN----ASFIYLLDAFDGT 220 (311)
T ss_pred ccCCCCc------eeEccCCCCccceeeeEEcCCCCEEEEEeC----CCcEEEEEccCCc
Confidence 3 12211 111111111 11344667899998887654 3467888876676
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=89.26 E-value=18 Score=36.31 Aligned_cols=128 Identities=12% Similarity=0.110 Sum_probs=69.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee--eeccccce-eEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV--LTPRVVGV-DTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~--l~~~~~~~-~~~~s 84 (505)
.+|++|.|-.+....+.+..+... =...++.||||++|+..- ....+.++|+.+.. .+. ..-+...+ -..||
T Consensus 465 gkvhvysl~g~~l~ee~~~~~h~a-~iT~vaySpd~~yla~~D---a~rkvv~yd~~s~~-~~~~~w~FHtakI~~~aWs 539 (603)
T KOG0318|consen 465 GKVHVYSLSGDELKEEAKLLEHRA-AITDVAYSPDGAYLAAGD---ASRKVVLYDVASRE-VKTNRWAFHTAKINCVAWS 539 (603)
T ss_pred ceEEEEEecCCcccceeeeecccC-CceEEEECCCCcEEEEec---cCCcEEEEEcccCc-eecceeeeeeeeEEEEEeC
Confidence 458888884332233333332211 123568999999987652 23467888888875 321 11111112 23599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCe
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGL 146 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~ 146 (505)
|+.+.++=-+- ..-++.++++.+..--......... +..+.|..+.-++..-++..
T Consensus 540 P~n~~vATGSl-----Dt~Viiysv~kP~~~i~iknAH~~g-Vn~v~wlde~tvvSsG~Da~ 595 (603)
T KOG0318|consen 540 PNNKLVATGSL-----DTNVIIYSVKKPAKHIIIKNAHLGG-VNSVAWLDESTVVSSGQDAN 595 (603)
T ss_pred CCceEEEeccc-----cceEEEEEccChhhheEeccccccC-ceeEEEecCceEEeccCcce
Confidence 99886652221 1367777776533221122222333 67788887766666655543
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.52 Score=49.29 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHHHHc--C--CCC---CCcEEEEeeChHHHHHHHHHhhCCCceeEEE
Q 010654 321 NTFTDFIACAEYLIKN--C--YCT---KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 371 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~--~--~~d---~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v 371 (505)
...+-+.+|+.++.+. + .-+ |.-|.++||||||..+.++++ +|+..+..|
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sV 210 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSV 210 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchh
Confidence 4556677888887764 2 233 667999999999988877777 575555444
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=89.12 E-value=3.2 Score=40.17 Aligned_cols=143 Identities=12% Similarity=-0.002 Sum_probs=73.3
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-ccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
-...++|.|+|++|.-.+ .+. ..-+.|+.++. .-.+.. +..+.. ..|.+||.-+. ....+ ...+++ |+.
T Consensus 263 RVs~VafHPsG~~L~Tas--fD~-tWRlWD~~tk~-ElL~QEGHs~~v~~iaf~~DGSL~~-tGGlD--~~~RvW--DlR 333 (459)
T KOG0272|consen 263 RVSRVAFHPSGKFLGTAS--FDS-TWRLWDLETKS-ELLLQEGHSKGVFSIAFQPDGSLAA-TGGLD--SLGRVW--DLR 333 (459)
T ss_pred hheeeeecCCCceeeecc--ccc-chhhcccccch-hhHhhcccccccceeEecCCCceee-ccCcc--chhhee--ecc
Confidence 345788999999975332 222 23345777775 222222 222332 34889986433 32222 123444 665
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEE-ecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCC
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYE-REGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSR 189 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (505)
+ |...-.+....+ .|-++.|++++..++. ..+ ....+|++..... .-+.|...-.++.+-+++..+
T Consensus 334 t-gr~im~L~gH~k-~I~~V~fsPNGy~lATgs~D--nt~kVWDLR~r~~---------ly~ipAH~nlVS~Vk~~p~~g 400 (459)
T KOG0272|consen 334 T-GRCIMFLAGHIK-EILSVAFSPNGYHLATGSSD--NTCKVWDLRMRSE---------LYTIPAHSNLVSQVKYSPQEG 400 (459)
T ss_pred c-CcEEEEeccccc-ceeeEeECCCceEEeecCCC--CcEEEeeeccccc---------ceecccccchhhheEecccCC
Confidence 4 333224554444 3779999998754443 333 3456787753111 112222222233444566677
Q ss_pred EEEEEEec
Q 010654 190 ILRFHYSS 197 (505)
Q Consensus 190 ~~~~~~~~ 197 (505)
.++++++-
T Consensus 401 ~fL~Tasy 408 (459)
T KOG0272|consen 401 YFLVTASY 408 (459)
T ss_pred eEEEEccc
Confidence 77766653
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=89.00 E-value=16 Score=33.92 Aligned_cols=56 Identities=14% Similarity=0.103 Sum_probs=37.2
Q ss_pred ceEEEEEeCCCCCceeeeeccccceeEE----eeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVDTA----ASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~~~----~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
-+..++.|..+.+++..+.. ..+..++ |||||++||-..|+-.....-|-+||...
T Consensus 90 Gtf~~vfD~~~~~~pv~~~s-~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~ 149 (366)
T COG3490 90 GTFAMVFDPNGAQEPVTLVS-QEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE 149 (366)
T ss_pred CceEEEECCCCCcCcEEEec-ccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc
Confidence 35678888888764444433 3343332 99999999988876444456777888653
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=88.97 E-value=5.5 Score=37.58 Aligned_cols=101 Identities=17% Similarity=0.120 Sum_probs=55.2
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.+.|+||+ ||-......++.....+.+.+. |.-|.++.. |.+ . .+ .+-....+.+..+.+.+.+....
T Consensus 24 ~~~P~Viw-HG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~-----~~---s~~~~~~~Qve~vce~l~~~~~l 92 (314)
T PLN02633 24 VSVPFIML-HGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG-V-----GD---SWLMPLTQQAEIACEKVKQMKEL 92 (314)
T ss_pred CCCCeEEe-cCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC-c-----cc---cceeCHHHHHHHHHHHHhhchhh
Confidence 45676655 9866555555554444555443 666665544 222 1 00 11112223333334444443332
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEec
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAA 373 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~ 373 (505)
.+-+-++|+|.||.++=.++.+.|+ .++-.|+.
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 2458899999999999888888776 35555543
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=88.95 E-value=13 Score=37.28 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=82.8
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc------eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG------VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.|.|+.+..+++.+....-++|-++-...+ .+.+.+...+ ....|++||+.|+-- ..+|+ -+++ +..+
T Consensus 275 ~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-~qVik~k~~~g~Rv~~tsC~~nrdg~~iAag-c~DGS--IQ~W--~~~~ 348 (641)
T KOG0772|consen 275 CWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-LQVIKTKPAGGKRVPVTSCAWNRDGKLIAAG-CLDGS--IQIW--DKGS 348 (641)
T ss_pred ccccCcccceEEecCCCcEEEEecCCchhh-eeEEeeccCCCcccCceeeecCCCcchhhhc-ccCCc--eeee--ecCC
Confidence 699999998888776666677776544333 4444433222 123399999885422 22221 2333 2221
Q ss_pred CC-CceEEE--cCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccC
Q 010654 112 TS-ETTVLI--PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSS 188 (505)
Q Consensus 112 ~~-~~~~~~--~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (505)
.. .+...+ ++.....|..+..+.|+-+++.+-.. ..|.+|+|.--.+ +|-.. ..++. .+.-....+||+.
T Consensus 349 ~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D-~tLKvWDLrq~kk---pL~~~--tgL~t-~~~~tdc~FSPd~ 421 (641)
T KOG0772|consen 349 RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD-DTLKVWDLRQFKK---PLNVR--TGLPT-PFPGTDCCFSPDD 421 (641)
T ss_pred cccccceEeeeccCCCCceeEEEeccccchhhhccCC-Cceeeeecccccc---chhhh--cCCCc-cCCCCccccCCCc
Confidence 11 111122 23444568888888887666655332 3477888753122 22110 11111 0111123467776
Q ss_pred CEEEEEEecCC---CCceEEEEECCC
Q 010654 189 RILRFHYSSLR---TPPSVYDYDMDM 211 (505)
Q Consensus 189 ~~~~~~~~~~~---~p~~~~~~~~~~ 211 (505)
. ++++.+|.. .++.|+.++..+
T Consensus 422 k-li~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 422 K-LILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred e-EEEecccccCCCCCceEEEEeccc
Confidence 6 666666632 555677777543
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=88.79 E-value=20 Score=33.24 Aligned_cols=140 Identities=9% Similarity=-0.030 Sum_probs=70.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeee-cccc-ce-eE
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLT-PRVV-GV-DT 81 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~-~~~~-~~-~~ 81 (505)
....||....+.. ...+... .-...|.|++||...++.. ......++. +..++. ....+. +... .+ .+
T Consensus 46 ~~~~L~~~~~~~~---~~~~~~g---~~l~~PS~d~~g~~W~v~~-~~~~~~~~~-~~~~g~~~~~~v~~~~~~~~I~~l 117 (253)
T PF10647_consen 46 GGRSLYVGPAGGP---VRPVLTG---GSLTRPSWDPDGWVWTVDD-GSGGVRVVR-DSASGTGEPVEVDWPGLRGRITAL 117 (253)
T ss_pred CCCEEEEEcCCCc---ceeeccC---CccccccccCCCCEEEEEc-CCCceEEEE-ecCCCcceeEEecccccCCceEEE
Confidence 3456777766542 2233221 2345789999976544433 222223333 333343 122222 2111 22 34
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCC--CCCCceE-----EEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVD--NTSETTV-----LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 153 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~-----~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~ 153 (505)
.+||||.++++.....+. .+|++.-+. +.+.... .+.......+.++.|.++ .|++.....+.....++.
T Consensus 118 ~vSpDG~RvA~v~~~~~~--~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~~v~ 195 (253)
T PF10647_consen 118 RVSPDGTRVAVVVEDGGG--GRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVRLVS 195 (253)
T ss_pred EECCCCcEEEEEEecCCC--CeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCCceeEEEE
Confidence 599999999999866432 577776553 2121111 222222335678999887 565555554443333344
Q ss_pred cC
Q 010654 154 LP 155 (505)
Q Consensus 154 ~~ 155 (505)
+.
T Consensus 196 ~d 197 (253)
T PF10647_consen 196 VD 197 (253)
T ss_pred cc
Confidence 33
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.67 E-value=9.4 Score=34.76 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=59.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
+..|+|-..-++++..... .+.++|...++ ...-+... ++....|||+|+++++...++ .|..+|..+.
T Consensus 69 ql~w~~~~~d~~atas~dk--~ir~wd~r~~k-~~~~i~~~~eni~i~wsp~g~~~~~~~kdD-----~it~id~r~~-- 138 (313)
T KOG1407|consen 69 QLCWDPKHPDLFATASGDK--TIRIWDIRSGK-CTARIETKGENINITWSPDGEYIAVGNKDD-----RITFIDARTY-- 138 (313)
T ss_pred hheeCCCCCcceEEecCCc--eEEEEEeccCc-EEEEeeccCcceEEEEcCCCCEEEEecCcc-----cEEEEEeccc--
Confidence 4567766655555544432 34555665555 33222222 234445999999999887652 6777786541
Q ss_pred ceEEEcCCCCceeeEEEEeC-CEEEEEEecCCeeEEEEE
Q 010654 115 TTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTY 152 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~-d~l~~~~~~~~~~~l~~~ 152 (505)
+.+-+.........+.|.. +.++|..+-.|.-++.-|
T Consensus 139 -~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsy 176 (313)
T KOG1407|consen 139 -KIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSY 176 (313)
T ss_pred -ceeehhcccceeeeeeecCCCCEEEEecCCceEEEEec
Confidence 1122333333345666765 467777766665544444
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.56 E-value=20 Score=32.92 Aligned_cols=135 Identities=14% Similarity=0.170 Sum_probs=74.7
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC------c-e-eeeeccccc
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE------E-L-RVLTPRVVG 78 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~------~-~-~~l~~~~~~ 78 (505)
.+.+||+-|++ ....++. +.-.-...+|++|.++++..... ..+.|.+.|+.... + . +..++...-
T Consensus 75 t~kLWDv~tGk--~la~~k~--~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ski 150 (327)
T KOG0643|consen 75 TAKLWDVETGK--QLATWKT--NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKI 150 (327)
T ss_pred eeEEEEcCCCc--EEEEeec--CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccce
Confidence 36788887763 3333332 21222567899999988876543 45667777765321 2 2 222333222
Q ss_pred eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 79 VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 79 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
...-|+|-|+.|+.-.. .+.|-.+|+.+ |..-......-...|.+++.++|. .+++..++.... ++++.
T Consensus 151 t~a~Wg~l~~~ii~Ghe-----~G~is~~da~~-g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttak--l~D~~ 220 (327)
T KOG0643|consen 151 TSALWGPLGETIIAGHE-----DGSISIYDART-GKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAK--LVDVR 220 (327)
T ss_pred eeeeecccCCEEEEecC-----CCcEEEEEccc-CceeeechhhhccccccccccCCcceEEecccCccce--eeecc
Confidence 22349999987764432 24677888765 332211111112367888888885 555566665543 45543
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=88.52 E-value=3.4 Score=40.67 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=71.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--Eeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~ 85 (505)
.+|++|++-.. ..-.+.|-+... =.-++.||.+|+.++ +.+ ....|-+.|+++|+....+..+ ...+ .+.|
T Consensus 237 ~~vklW~vy~~-~~~lrtf~gH~k-~Vrd~~~s~~g~~fL--S~s-fD~~lKlwDtETG~~~~~f~~~--~~~~cvkf~p 309 (503)
T KOG0282|consen 237 GLVKLWNVYDD-RRCLRTFKGHRK-PVRDASFNNCGTSFL--SAS-FDRFLKLWDTETGQVLSRFHLD--KVPTCVKFHP 309 (503)
T ss_pred ceEEEEEEecC-cceehhhhcchh-hhhhhhccccCCeee--eee-cceeeeeeccccceEEEEEecC--CCceeeecCC
Confidence 46888888653 223333332211 112578999999854 222 2345777899999722222211 1222 3889
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+..+++....+ .+|...|.......+ ...+... .+..+...+++ .++...+++. +.+|+..
T Consensus 310 d~~n~fl~G~sd----~ki~~wDiRs~kvvq-eYd~hLg-~i~~i~F~~~g~rFissSDdks--~riWe~~ 372 (503)
T KOG0282|consen 310 DNQNIFLVGGSD----KKIRQWDIRSGKVVQ-EYDRHLG-AILDITFVDEGRRFISSSDDKS--VRIWENR 372 (503)
T ss_pred CCCcEEEEecCC----CcEEEEeccchHHHH-HHHhhhh-heeeeEEccCCceEeeeccCcc--EEEEEcC
Confidence 997788776543 488888886521111 1112222 35566666654 4444555554 4455443
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.50 E-value=0.88 Score=45.44 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=50.7
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCc-------------h----hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcch
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFN-------------S----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 322 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~-------------~----~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~ 322 (505)
..+.|+|+++-||||.+...... + .-..|.+.+ .++.+|.+-.+||...-.... .......
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a-dLvFiDqPvGTGfS~a~~~e~-~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFA-DLVFIDQPVGTGFSRALGDEK-KKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCC-ceEEEecCcccCccccccccc-ccchhcc
Confidence 35789999999999864322111 0 113566665 455567444444443211111 1111122
Q ss_pred HHHHHHHHH----HHHHcCCCCCCcEEEEeeChHHHHHHHHH
Q 010654 323 FTDFIACAE----YLIKNCYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 323 ~~D~~~~~~----~l~~~~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
-+|+..+.+ ++-+.... -.+..|+|.||||.-+..+|
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~-~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARL-LSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhh-cCceeEeeccccchhhHHHH
Confidence 244444333 33333221 24788999999998665554
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=88.25 E-value=1.3 Score=42.97 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=50.1
Q ss_pred HHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC
Q 010654 285 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 285 ~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p 364 (505)
...|.++|+-|+-+|-- +-|.. .........|+...+++...+.. .+|+.++|+|+|+-+.-.+..+-|
T Consensus 280 ~~~l~~~gvpVvGvdsL------RYfW~---~rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 280 AEALQKQGVPVVGVDSL------RYFWS---ERTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHCCCceeeeehh------hhhhc---cCCHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchhhHHHHHhCC
Confidence 35788899999999842 11110 12223456888888888877643 379999999999988777766655
Q ss_pred Ccee
Q 010654 365 DLFK 368 (505)
Q Consensus 365 ~~~~ 368 (505)
...+
T Consensus 349 ~~~r 352 (456)
T COG3946 349 PATR 352 (456)
T ss_pred HHHH
Confidence 4433
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.7 Score=37.65 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.++.+.++-|.... ....++.++|||||+.++..++.+
T Consensus 92 ~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 92 PRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhh
Confidence 44444444444433 345689999999999999988876
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.78 E-value=32 Score=34.51 Aligned_cols=101 Identities=8% Similarity=0.070 Sum_probs=59.0
Q ss_pred CCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc--------cceEEEEEeCCCCCceeeeecc
Q 010654 4 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--------ITRFVFYLDVSKPEELRVLTPR 75 (505)
Q Consensus 4 ~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--------~~~~l~~~d~~~~~~~~~l~~~ 75 (505)
...|.++-++.+.-+ .++....=..--.+.+.|-+.|++|++....+ .-++||++++.... .+.....
T Consensus 198 ~~kpa~~~i~sIp~~---s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~ 273 (561)
T COG5354 198 LNKPAMVRILSIPKN---SVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDL 273 (561)
T ss_pred CCCCcEEEEEEccCC---CeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccc
Confidence 345667777777522 22222110000124578999999998886442 23789999998554 3333222
Q ss_pred ccc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 76 VVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 76 ~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+- .++.|+|+++.+.+.+... + ..+..+++.+
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~--p-a~~s~~~lr~ 307 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYM--P-ASVSVFDLRG 307 (561)
T ss_pred cccceeeeecccCCceeEEeccc--c-cceeeccccc
Confidence 222 2456999999999998331 1 3555566653
|
|
| >KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown] | Back alignment and domain information |
|---|
Probab=87.62 E-value=28 Score=34.89 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=59.9
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+.+.|.| .|++-. .....+++|.++.. +-.+-...+... ..++|||..|++-+.+ +.-.||+++..+...
T Consensus 412 ~~~fhpsg-~va~Gt---~~G~w~V~d~e~~~-lv~~~~d~~~ls~v~ysp~G~~lAvgs~d---~~iyiy~Vs~~g~~y 483 (626)
T KOG2106|consen 412 CADFHPSG-VVAVGT---ATGRWFVLDTETQD-LVTIHTDNEQLSVVRYSPDGAFLAVGSHD---NHIYIYRVSANGRKY 483 (626)
T ss_pred EeeccCcc-eEEEee---ccceEEEEecccce-eEEEEecCCceEEEEEcCCCCEEEEecCC---CeEEEEEECCCCcEE
Confidence 34577888 444432 23457778888754 332222211111 2399999999988754 222444444433211
Q ss_pred ceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 115 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
.+ +.......|..++|+.|.-++..+..+.. +..|
T Consensus 484 ~r--~~k~~gs~ithLDwS~Ds~~~~~~S~d~e-iLyW 518 (626)
T KOG2106|consen 484 SR--VGKCSGSPITHLDWSSDSQFLVSNSGDYE-ILYW 518 (626)
T ss_pred EE--eeeecCceeEEeeecCCCceEEeccCceE-EEEE
Confidence 11 22122257889999999988888876654 4445
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=87.57 E-value=27 Score=33.43 Aligned_cols=134 Identities=10% Similarity=0.006 Sum_probs=70.0
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEEeeeeC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg 87 (505)
+-|+|++.++. ..-.+.+. .+-.....||-||.+|+- ..-...|.+...+++. ++....+..+=....|.|.+
T Consensus 87 ~AflW~~~~ge-~~~eltgH--KDSVt~~~FshdgtlLAT---GdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a 160 (399)
T KOG0296|consen 87 LAFLWDISTGE-FAGELTGH--KDSVTCCSFSHDGTLLAT---GDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRA 160 (399)
T ss_pred eEEEEEccCCc-ceeEecCC--CCceEEEEEccCceEEEe---cCCCccEEEEEcccCceEEEeecccCceEEEEecccc
Confidence 46899998863 22222222 334557789999988752 2334567777777776 22222222222335588866
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.-|+ ....++ .++...+...+..+..-++......+.+..++++++..+. +| .+.+|++.+
T Consensus 161 ~ill-AG~~DG----svWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~-dg--ti~~Wn~kt 221 (399)
T KOG0296|consen 161 HILL-AGSTDG----SVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYD-DG--TIIVWNPKT 221 (399)
T ss_pred cEEE-eecCCC----cEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEec-Cc--eEEEEecCC
Confidence 4444 333333 4555554432333323333334444555555455444443 44 366777654
|
|
| >KOG2394 consensus WD40 protein DMR-N9 [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.46 E-value=0.61 Score=46.33 Aligned_cols=55 Identities=20% Similarity=0.156 Sum_probs=36.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--EeeeeCCEEEEEE
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASHRGNHFFITR 94 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~~ 94 (505)
++.+||||++|+..+.+. -|-+.|.++.+ +.-+.+.--|-.. .|||||++|+.-.
T Consensus 295 ~f~FS~DG~~LA~VSqDG---fLRvF~fdt~e-Llg~mkSYFGGLLCvcWSPDGKyIvtGG 351 (636)
T KOG2394|consen 295 EFAFSPDGKYLATVSQDG---FLRIFDFDTQE-LLGVMKSYFGGLLCVCWSPDGKYIVTGG 351 (636)
T ss_pred ceeEcCCCceEEEEecCc---eEEEeeccHHH-HHHHHHhhccceEEEEEcCCccEEEecC
Confidence 467899999998776543 46666777664 5555544433332 3999999776544
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.2 Score=40.52 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++...+..+.++. ...+|.+.|||+||.++..++..
T Consensus 111 ~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 111 YNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 344555555554441 23689999999999998877664
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.89 E-value=1.2 Score=43.89 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..+++.+.++.++++.--..-+|.++|||+||.++..++..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 45677777887776532112259999999999999887753
|
|
| >KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=86.67 E-value=6.5 Score=39.57 Aligned_cols=57 Identities=11% Similarity=0.080 Sum_probs=39.6
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec--cccceeEEeeeeCCEEEEEEcC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVVGVDTAASHRGNHFFITRRS 96 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~~~~ 96 (505)
+.|+|-|++|++..-.....++-+.|+.+.+ ++.. ..+...+.|+|||++|+-.++.
T Consensus 317 ~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K---~i~~~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 317 AFFNPHGNIILLAGFGNLPGDMEVWDVPNRK---LIAKFKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred eEECCCCCEEEEeecCCCCCceEEEeccchh---hccccccCCceEEEEcCCCcEEEEEecc
Confidence 4689999999988765567788888887743 3322 1222334599999988877654
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=86.64 E-value=38 Score=35.51 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=18.4
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+||||+++|.....+ ..+-++|++.
T Consensus 327 ~vSPDGkylyVanklS----~tVSVIDv~k 352 (635)
T PRK02888 327 NTSPDGKYFIANGKLS----PTVTVIDVRK 352 (635)
T ss_pred EECCCCCEEEEeCCCC----CcEEEEEChh
Confidence 3899999988776432 3677777764
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=86.31 E-value=18 Score=35.74 Aligned_cols=107 Identities=9% Similarity=0.035 Sum_probs=62.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE--eeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.++|+-||..|+...- ..++-+++..+.. ...+-.+. |..+. |+.+|.+|+=.+ .+ ....+.|.-. +
T Consensus 240 ~L~Wn~~G~~LatG~~---~G~~riw~~~G~l-~~tl~~Hk-gPI~slKWnk~G~yilS~~----vD-~ttilwd~~~-g 308 (524)
T KOG0273|consen 240 SLDWNNDGTLLATGSE---DGEARIWNKDGNL-ISTLGQHK-GPIFSLKWNKKGTYILSGG----VD-GTTILWDAHT-G 308 (524)
T ss_pred eEEecCCCCeEEEeec---CcEEEEEecCchh-hhhhhccC-CceEEEEEcCCCCEEEecc----CC-ccEEEEeccC-c
Confidence 6789999998875433 3456666666654 44444444 33333 888887654222 12 3667777654 3
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+....++...-. -.+++|-.+.-+.+...++. +++|.+..
T Consensus 309 ~~~q~f~~~s~~-~lDVdW~~~~~F~ts~td~~--i~V~kv~~ 348 (524)
T KOG0273|consen 309 TVKQQFEFHSAP-ALDVDWQSNDEFATSSTDGC--IHVCKVGE 348 (524)
T ss_pred eEEEeeeeccCC-ccceEEecCceEeecCCCce--EEEEEecC
Confidence 322244433221 24788988777777666654 56677653
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=86.24 E-value=22 Score=37.39 Aligned_cols=170 Identities=14% Similarity=0.169 Sum_probs=93.5
Q ss_pred eEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEecccc-ceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
.+-+|.+.|- ....+|.+.. |-| +++++|-|-| |.+.+++ ...||..|-..+ +|.+..+..... +.|.|
T Consensus 474 svRLWsl~t~--s~~V~y~GH~~PVw--dV~F~P~GyY--Fatas~D~tArLWs~d~~~P--lRifaghlsDV~cv~FHP 545 (707)
T KOG0263|consen 474 SVRLWSLDTW--SCLVIYKGHLAPVW--DVQFAPRGYY--FATASHDQTARLWSTDHNKP--LRIFAGHLSDVDCVSFHP 545 (707)
T ss_pred ceeeeecccc--eeEEEecCCCccee--eEEecCCceE--EEecCCCceeeeeecccCCc--hhhhcccccccceEEECC
Confidence 4667788773 4566666432 333 4567899855 3344544 568888887543 455555443344 45888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ 165 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 165 (505)
...+++ +. ..+ ..+-..|+......+ +++.... .+..+..++++.+++..... ..+.+|++.. |..+..+-
T Consensus 546 Ns~Y~a--TG--SsD-~tVRlWDv~~G~~VR-iF~GH~~-~V~al~~Sp~Gr~LaSg~ed-~~I~iWDl~~-~~~v~~l~ 616 (707)
T KOG0263|consen 546 NSNYVA--TG--SSD-RTVRLWDVSTGNSVR-IFTGHKG-PVTALAFSPCGRYLASGDED-GLIKIWDLAN-GSLVKQLK 616 (707)
T ss_pred cccccc--cC--CCC-ceEEEEEcCCCcEEE-EecCCCC-ceEEEEEcCCCceEeecccC-CcEEEEEcCC-Ccchhhhh
Confidence 876543 21 112 233334555422333 6765444 58889999988887765432 3578899874 33333221
Q ss_pred CCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEE
Q 010654 166 GGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVY 205 (505)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 205 (505)
++ .. .+..++++.+|+.+ ...+..+.-.+|
T Consensus 617 -~H----t~---ti~SlsFS~dg~vL--asgg~DnsV~lW 646 (707)
T KOG0263|consen 617 -GH----TG---TIYSLSFSRDGNVL--ASGGADNSVRLW 646 (707)
T ss_pred -cc----cC---ceeEEEEecCCCEE--EecCCCCeEEEE
Confidence 11 11 23335667787733 344444444555
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.18 E-value=28 Score=33.79 Aligned_cols=67 Identities=24% Similarity=0.149 Sum_probs=48.3
Q ss_pred EEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 427 ILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 427 ~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.+.+.+..|.++|..+.+++++..+..|+.++-+-+.+.....|.-. .+..+ .....+|+.......
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~--~p~~y--~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS--FPKTY--LKKCSEFLRSVISSY 294 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc--CcHHH--HHHHHHHHHhccccc
Confidence 67777999999999999999999999999888777775434444322 22222 234788998876543
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=86.12 E-value=9 Score=34.76 Aligned_cols=133 Identities=11% Similarity=0.071 Sum_probs=73.0
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE--eeeeC
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRG 87 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg 87 (505)
|-+||++.+ ...+..|.|.... ..+++|.+-.++++++++...+-.||..+.... ++.+.... ...|. |||.-
T Consensus 85 Lrl~d~~~~-s~Pi~~~kEH~~E-V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S--v~Tf~gh~-~~Iy~a~~sp~~ 159 (311)
T KOG0277|consen 85 LRLFDLTMP-SKPIHKFKEHKRE-VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS--VQTFNGHN-SCIYQAAFSPHI 159 (311)
T ss_pred EEEeccCCC-CcchhHHHhhhhh-eEEeccccccceeEEeeccCCceEeecCCCCcc--eEeecCCc-cEEEEEecCCCC
Confidence 556665543 4455566554332 236679998888887775555667777665543 44444332 23343 88765
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.-++-....+ ..+-+.|+...|... .+.... ..+...+|++ ..++++...+. -++.|++.
T Consensus 160 ~nlfas~Sgd----~~l~lwdvr~~gk~~-~i~ah~-~Eil~cdw~ky~~~vl~Tg~vd~--~vr~wDir 221 (311)
T KOG0277|consen 160 PNLFASASGD----GTLRLWDVRSPGKFM-SIEAHN-SEILCCDWSKYNHNVLATGGVDN--LVRGWDIR 221 (311)
T ss_pred CCeEEEccCC----ceEEEEEecCCCcee-EEEecc-ceeEeecccccCCcEEEecCCCc--eEEEEehh
Confidence 4444333222 245555665545554 333222 2366777876 35555555544 46677764
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=86.02 E-value=60 Score=35.85 Aligned_cols=134 Identities=8% Similarity=0.052 Sum_probs=72.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEe-ee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAA-SH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~-s~ 85 (505)
..|.+||+.+++ ....+.+ .......++|+| ||.+|+..+. ...+.+.|+.++.....+.....-....| ++
T Consensus 555 g~v~lWd~~~~~--~~~~~~~-H~~~V~~l~~~p~~~~~L~Sgs~---Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~ 628 (793)
T PLN00181 555 GVVQVWDVARSQ--LVTEMKE-HEKRVWSIDYSSADPTLLASGSD---DGSVKLWSINQGVSIGTIKTKANICCVQFPSE 628 (793)
T ss_pred CeEEEEECCCCe--EEEEecC-CCCCEEEEEEcCCCCCEEEEEcC---CCEEEEEECCCCcEEEEEecCCCeEEEEEeCC
Confidence 457888987642 2333332 233445778997 7776543322 34577788877652223322211112235 45
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+|..|+.-+.+ ..++.+|+.........+.... ..+..+.|.++..+++...++. +.+|++.
T Consensus 629 ~g~~latgs~d-----g~I~iwD~~~~~~~~~~~~~h~-~~V~~v~f~~~~~lvs~s~D~~--ikiWd~~ 690 (793)
T PLN00181 629 SGRSLAFGSAD-----HKVYYYDLRNPKLPLCTMIGHS-KTVSYVRFVDSSTLVSSSTDNT--LKLWDLS 690 (793)
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCccceEecCCC-CCEEEEEEeCCCEEEEEECCCE--EEEEeCC
Confidence 66666554432 3788888865221211232222 2467788876666666666654 6778875
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.96 E-value=18 Score=35.19 Aligned_cols=116 Identities=11% Similarity=0.010 Sum_probs=67.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc---cc---eeE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV---VG---VDT 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~---~~---~~~ 81 (505)
.+|-+||+++. +.++.. +-..-.-++..|+||..|+..+ ....+=++|+.+.. .+...... .+ ...
T Consensus 322 kkvRfwD~Rs~--~~~~sv--~~gg~vtSl~ls~~g~~lLsss---RDdtl~viDlRt~e-I~~~~sA~g~k~asDwtrv 393 (459)
T KOG0288|consen 322 KKVRFWDIRSA--DKTRSV--PLGGRVTSLDLSMDGLELLSSS---RDDTLKVIDLRTKE-IRQTFSAEGFKCASDWTRV 393 (459)
T ss_pred cceEEEeccCC--ceeeEe--ecCcceeeEeeccCCeEEeeec---CCCceeeeeccccc-EEEEeecccccccccccee
Confidence 34888998764 222222 2233444788999999976552 22346677887765 55443222 11 123
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH 136 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~ 136 (505)
.|||||++++--+. .+.||+.++.+..-+..+-....+..|..+.|++.+
T Consensus 394 vfSpd~~YvaAGS~-----dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 394 VFSPDGSYVAAGSA-----DGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG 443 (459)
T ss_pred EECCCCceeeeccC-----CCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence 49999987764332 358999998762222323333444357788887754
|
|
| >KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.57 E-value=14 Score=34.75 Aligned_cols=91 Identities=11% Similarity=0.114 Sum_probs=60.1
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
-.+||+|..++ .+.++.-.+.||+.|+..-+ +..+......+.+ .|.|..-+|++.+.. .|||....++
T Consensus 323 ~lafs~Ds~y~-aTrnd~~PnalW~Wdlq~l~-l~avLiQk~piraf~WdP~~prL~vctg~-----srLY~W~psg--- 392 (447)
T KOG4497|consen 323 KLAFSCDSTYA-ATRNDKYPNALWLWDLQNLK-LHAVLIQKHPIRAFEWDPGRPRLVVCTGK-----SRLYFWAPSG--- 392 (447)
T ss_pred eeeecCCceEE-eeecCCCCceEEEEechhhh-hhhhhhhccceeEEEeCCCCceEEEEcCC-----ceEEEEcCCC---
Confidence 46899999885 45677778999999998765 3333222223444 499988888888743 4899888765
Q ss_pred ceEEEcCCCCceeeEEEEeCCE
Q 010654 115 TTVLIPHRESVKLQDIQLFIDH 136 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~d~ 136 (505)
...+--+.+.-.|..+.|..++
T Consensus 393 ~~~V~vP~~GF~i~~l~W~~~g 414 (447)
T KOG4497|consen 393 PRVVGVPKKGFNIQKLQWLQPG 414 (447)
T ss_pred ceEEecCCCCceeeeEEecCCC
Confidence 2322122333457888887653
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=85.34 E-value=1.4 Score=45.19 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=49.0
Q ss_pred CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc-cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHH
Q 010654 281 FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF-LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359 (505)
Q Consensus 281 ~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~ 359 (505)
|....+.|++.||. --|.+|.+ -+|+.+... ..+..-+..+...|+.+.+.. ..++|.|+||||||.++...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAP---YDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAA---YDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecc---cccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHH
Confidence 35667889999997 45666543 356543221 122344566777777665542 13689999999999999887
Q ss_pred Hhh
Q 010654 360 LNM 362 (505)
Q Consensus 360 ~~~ 362 (505)
+..
T Consensus 231 L~w 233 (642)
T PLN02517 231 MKW 233 (642)
T ss_pred HHh
Confidence 653
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.25 E-value=3.6 Score=39.32 Aligned_cols=143 Identities=10% Similarity=0.072 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc------cCCCCCCCcccc
Q 010654 323 FTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM------LDPTIPLTTAEW 395 (505)
Q Consensus 323 ~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~------~~~~~~~~~~~~ 395 (505)
+..+..|++-..+. ..+.-++..|.|.|--|+.+...|...|..++.+-...-++|....+ ++..-|.....|
T Consensus 214 v~a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~py 293 (507)
T COG4287 214 VYAVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPY 293 (507)
T ss_pred HHHHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchh
Confidence 34444555544332 22445789999999999999888887775443332222233221111 111222222222
Q ss_pred cccC---CCCCHHHHHHHHhCChhhcc-----cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 396 EEWG---DPWKEEFYFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 396 ~~~g---~~~~~~~~~~~~~~sp~~~~-----~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
-+-| .-+.+.....+.-.+|+.+. .++..| -.|+.+..|+..++..+.-++..|.... .+...| +
T Consensus 294 yaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalp-KyivnaSgDdff~pDsa~lYyd~LPG~k---aLrmvP---N 366 (507)
T COG4287 294 YAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALP-KYIVNASGDDFFVPDSANLYYDDLPGEK---ALRMVP---N 366 (507)
T ss_pred HhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhcccc-ceeecccCCcccCCCccceeeccCCCce---eeeeCC---C
Confidence 1111 11334444444556887666 555777 8888899999999999999999887532 234455 7
Q ss_pred CCCCC
Q 010654 468 AGHFS 472 (505)
Q Consensus 468 ~gH~~ 472 (505)
..|..
T Consensus 367 ~~H~~ 371 (507)
T COG4287 367 DPHNL 371 (507)
T ss_pred Ccchh
Confidence 78854
|
|
| >KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=85.20 E-value=25 Score=36.30 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=51.6
Q ss_pred ceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-CCceeeEEEE
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQL 132 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 132 (505)
...+|+.|++++++...+....+-+.. .||.||+-++.. ..+ .+|..+|.....++. ..++. ....=+.+.|
T Consensus 149 ~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llats-cKd----kqirifDPRa~~~pi-Q~te~H~~~rdsRv~w 222 (1012)
T KOG1445|consen 149 HGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATS-CKD----KQIRIFDPRASMEPI-QTTEGHGGMRDSRVLW 222 (1012)
T ss_pred CceEEEEEcccCceeecccCCchhhhccccccCCceEeee-cCC----cceEEeCCccCCCcc-ccccccccchhheeee
Confidence 346899999998744444433333333 399999876644 332 377777865433332 23322 2212235677
Q ss_pred eCC--EEEEE-EecCCeeEEEEEEcC
Q 010654 133 FID--HLAVY-EREGGLQKITTYRLP 155 (505)
Q Consensus 133 ~~d--~l~~~-~~~~~~~~l~~~~~~ 155 (505)
.++ +|+-+ ++.....++.+|+..
T Consensus 223 ~Gn~~rlisTGF~~~R~reV~~~Dtr 248 (1012)
T KOG1445|consen 223 AGNWERLISTGFTTKRIREVRAYDTR 248 (1012)
T ss_pred ccchhhhhhcccchhhheeeeeeecc
Confidence 776 34333 233334456777754
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=85.00 E-value=1.6 Score=42.40 Aligned_cols=39 Identities=18% Similarity=0.036 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
+.+.+.+..++++.--.+.+|.|.|||.||.++..++..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 455566666665432223469999999999998887764
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=84.52 E-value=75 Score=36.32 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=42.8
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc-----ccc-----------eeEEeeeeCCEEEEEEcCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-----VVG-----------VDTAASHRGNHFFITRRSDEL 99 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~-----~~~-----------~~~~~s~dg~~l~~~~~~~~~ 99 (505)
++.++|++..|++... .+..|+++|..++. ...+... ..+ ....++|||++||+....
T Consensus 687 gVa~dp~~g~LyVad~--~~~~I~v~d~~~g~-v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~--- 760 (1057)
T PLN02919 687 DVCFEPVNEKVYIAMA--GQHQIWEYNISDGV-TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE--- 760 (1057)
T ss_pred EEEEecCCCeEEEEEC--CCCeEEEEECCCCe-EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC---
Confidence 5678887666665532 35568888887775 4332211 000 012388999998887543
Q ss_pred CCceEEEeeCCC
Q 010654 100 FNSELLACPVDN 111 (505)
Q Consensus 100 ~~~~l~~~~~~~ 111 (505)
+.+|.++|+++
T Consensus 761 -n~~Irv~D~~t 771 (1057)
T PLN02919 761 -SSSIRALDLKT 771 (1057)
T ss_pred -CCeEEEEECCC
Confidence 24888888875
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=84.52 E-value=27 Score=34.13 Aligned_cols=80 Identities=18% Similarity=0.082 Sum_probs=42.7
Q ss_pred EEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeeeeCCE
Q 010654 11 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNH 89 (505)
Q Consensus 11 ~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~ 89 (505)
.+||++|+ .-+.++++ .-.=..+++|||.|-.|+ +.+....-.||-+... .++-++..+.+- ....++|+.++
T Consensus 328 RvWDlRtg--r~im~L~g-H~k~I~~V~fsPNGy~lA-Tgs~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~ 401 (459)
T KOG0272|consen 328 RVWDLRTG--RCIMFLAG-HIKEILSVAFSPNGYHLA-TGSSDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGY 401 (459)
T ss_pred heeecccC--cEEEEecc-cccceeeEeECCCceEEe-ecCCCCcEEEeeeccc--ccceecccccchhhheEecccCCe
Confidence 47899886 45666665 222344788999997654 3333334445544332 222333222211 12347887666
Q ss_pred EEEEEcC
Q 010654 90 FFITRRS 96 (505)
Q Consensus 90 l~~~~~~ 96 (505)
+......
T Consensus 402 fL~Tasy 408 (459)
T KOG0272|consen 402 FLVTASY 408 (459)
T ss_pred EEEEccc
Confidence 6666544
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=83.79 E-value=20 Score=36.02 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=58.4
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCc-e---eeeeccccceeEEeeeeCCEEEEEEcC--CCCCCceEEEee
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEE-L---RVLTPRVVGVDTAASHRGNHFFITRRS--DELFNSELLACP 108 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~-~---~~l~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~ 108 (505)
..+.+|+||++|+- +.....|-++|+...++ + .-|.....+....||||.+ |++..+. .+.....|+.+|
T Consensus 368 tsi~FS~dg~~LlS---Rg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d 443 (641)
T KOG0772|consen 368 TSISFSYDGNYLLS---RGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFD 443 (641)
T ss_pred eEEEeccccchhhh---ccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCce-EEEecccccCCCCCceEEEEe
Confidence 36789999998752 22233455556655431 1 1112222344456999975 5555443 122335789888
Q ss_pred CCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEE
Q 010654 109 VDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 153 (505)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~ 153 (505)
.-++.... -+.-. ...+..+.|-+. .-+++..-+|..++ +|+
T Consensus 444 ~~t~d~v~-ki~i~-~aSvv~~~WhpkLNQi~~gsgdG~~~v-yYd 486 (641)
T KOG0772|consen 444 RMTLDTVY-KIDIS-TASVVRCLWHPKLNQIFAGSGDGTAHV-YYD 486 (641)
T ss_pred ccceeeEE-EecCC-CceEEEEeecchhhheeeecCCCceEE-EEC
Confidence 65533222 22222 445667778775 33444444555544 355
|
|
| >KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown] | Back alignment and domain information |
|---|
Probab=83.42 E-value=21 Score=33.05 Aligned_cols=108 Identities=12% Similarity=0.097 Sum_probs=56.6
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCc--eeeeeccccc-ee-E---Eeee--eCCEEEEEEcCCCCCCceEEEe
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEE--LRVLTPRVVG-VD-T---AASH--RGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~--~~~l~~~~~~-~~-~---~~s~--dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
+.|-|++..++-.. .++|.+++++.+.+ ...+.+...+ .. + .||| ||..++..+.. .|..+
T Consensus 129 vew~Pns~klasm~----dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~------tl~~~ 198 (370)
T KOG1007|consen 129 VEWEPNSDKLASMD----DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDS------TLQFW 198 (370)
T ss_pred EEEcCCCCeeEEec----cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCC------cEEEE
Confidence 46888888876554 45677777776641 1122222211 11 1 2886 67776655432 45556
Q ss_pred eCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 108 PVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|+.+ -...|.+...-...+.+++..++.-.+.++.+.-..+.+|+..
T Consensus 199 D~RT-~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R 245 (370)
T KOG1007|consen 199 DLRT-MKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR 245 (370)
T ss_pred Eccc-hhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence 6653 2233334333333455666777654444443333446778764
|
|
| >KOG0270 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.41 E-value=49 Score=32.62 Aligned_cols=137 Identities=8% Similarity=0.096 Sum_probs=74.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccce-eEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~-~~~~s~ 85 (505)
..|.+||+.+++... +++.. ..=.....|.|---.++++.+- ...+-+.|+.... ..+.+.-. ..+ ...|.|
T Consensus 266 ~TV~lWD~~~g~p~~--s~~~~-~k~Vq~l~wh~~~p~~LLsGs~--D~~V~l~D~R~~~~s~~~wk~~-g~VEkv~w~~ 339 (463)
T KOG0270|consen 266 KTVKLWDVDTGKPKS--SITHH-GKKVQTLEWHPYEPSVLLSGSY--DGTVALKDCRDPSNSGKEWKFD-GEVEKVAWDP 339 (463)
T ss_pred ceEEEEEcCCCCcce--ehhhc-CCceeEEEecCCCceEEEeccc--cceEEeeeccCccccCceEEec-cceEEEEecC
Confidence 468899998875433 33211 1112356788887776665432 2335555554211 01111111 111 234888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.....++.+..+ +.||-+|+...+.+-|.+-...+ .|++++.+...-.+.++..+-..+.+++++
T Consensus 340 ~se~~f~~~tdd----G~v~~~D~R~~~~~vwt~~AHd~-~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 340 HSENSFFVSTDD----GTVYYFDIRNPGKPVWTLKAHDD-EISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred CCceeEEEecCC----ceEEeeecCCCCCceeEEEeccC-CcceEEecCCCCcceeeccccceEEEEeec
Confidence 877777777654 48999999877778884443333 488888877533333333333345666665
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=83.34 E-value=2 Score=42.38 Aligned_cols=40 Identities=15% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.+++.+.++.++++.--..-+|.|+|||+||.+|..+|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4566677776665421112369999999999998887753
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=83.01 E-value=5.6 Score=35.00 Aligned_cols=69 Identities=22% Similarity=0.184 Sum_probs=38.9
Q ss_pred CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh---CCCc
Q 010654 291 RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RPDL 366 (505)
Q Consensus 291 ~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~---~p~~ 366 (505)
..+.|+.++.+|.+... .....++++... ++.+.+. ....++.++|||+||.++..++.+ .++.
T Consensus 24 ~~~~v~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 24 GRRDVSALPLPGFGPGE----------PLPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred CCccEEEecCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 35789999988765311 111223333332 2223322 123568899999999998777664 2334
Q ss_pred eeEEE
Q 010654 367 FKAAV 371 (505)
Q Consensus 367 ~~a~v 371 (505)
....+
T Consensus 92 ~~~l~ 96 (212)
T smart00824 92 PAAVV 96 (212)
T ss_pred CcEEE
Confidence 44444
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=82.79 E-value=92 Score=35.66 Aligned_cols=111 Identities=17% Similarity=0.171 Sum_probs=59.7
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-------------cc----------eeEEeeeeCCEEEE
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-------------VG----------VDTAASHRGNHFFI 92 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-------------~~----------~~~~~s~dg~~l~~ 92 (505)
+++++|||++|++... .++.|+++|++++. .+.+.... ++ ....++++|+ +|+
T Consensus 744 GIavspdG~~LYVADs--~n~~Irv~D~~tg~-~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYV 819 (1057)
T PLN02919 744 GISLSPDLKELYIADS--ESSSIRALDLKTGG-SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYV 819 (1057)
T ss_pred EEEEeCCCCEEEEEEC--CCCeEEEEECCCCc-EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEE
Confidence 4689999998776533 35679999988765 33322100 01 0112677775 544
Q ss_pred EEcCCCCCCceEEEeeCCCCCCceEEEcCC------------CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 93 TRRSDELFNSELLACPVDNTSETTVLIPHR------------ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.. . .+.+|.++|.++ +....+.... ......++..++++-++++.. +..++.++++.+
T Consensus 820 AD-s---~N~rIrviD~~t-g~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt-~Nn~Irvid~~~ 889 (1057)
T PLN02919 820 AD-S---YNHKIKKLDPAT-KRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADT-NNSLIRYLDLNK 889 (1057)
T ss_pred EE-C---CCCEEEEEECCC-CeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEEC-CCCEEEEEECCC
Confidence 43 2 235888888765 3222122110 011345677776644444332 234577888764
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.38 E-value=55 Score=32.47 Aligned_cols=162 Identities=11% Similarity=0.067 Sum_probs=84.7
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+++++|||+.+++......++.++++|..++.....+..........++|+|+.+|..... ...|..++..+ .
T Consensus 119 ~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~----~~~v~vi~~~~--~ 192 (381)
T COG3391 119 VGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSD----DNTVSVIDTSG--N 192 (381)
T ss_pred ceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecC----CCeEEEEeCCC--c
Confidence 35789999999877654435778999999887622222222212223499999998888732 24888888654 2
Q ss_pred ceEEE----cCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccC
Q 010654 115 TTVLI----PHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSS 188 (505)
Q Consensus 115 ~~~~~----~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (505)
..+.- .-........+.++.+ .+++....+....+..++... ...... ..+...........+|++
T Consensus 193 ~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~--~~v~~~------~~~~~~~~~~~v~~~p~g 264 (381)
T COG3391 193 SVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT--GNVTAT------DLPVGSGAPRGVAVDPAG 264 (381)
T ss_pred ceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCC--ceEEEe------ccccccCCCCceeECCCC
Confidence 11110 0111112234555555 344443333223455555442 211110 011111001123456778
Q ss_pred CEEEEEEecCCCCceEEEEECCCCc
Q 010654 189 RILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 189 ~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+++..+. ...++.++..+..
T Consensus 265 ~~~yv~~~~---~~~V~vid~~~~~ 286 (381)
T COG3391 265 KAAYVANSQ---GGTVSVIDGATDR 286 (381)
T ss_pred CEEEEEecC---CCeEEEEeCCCCc
Confidence 866555443 6677888866554
|
|
| >KOG1539 consensus WD repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.26 E-value=4.8 Score=42.45 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=48.6
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGN 88 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~ 88 (505)
.|.++|..|. .-.+.|.+. .+-.-+..+|||||+|+..+.. +.|.+.|+-++.....+.-........+||.|.
T Consensus 557 ~I~vvD~~t~--kvvR~f~gh-~nritd~~FS~DgrWlisasmD---~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD 630 (910)
T KOG1539|consen 557 SIRVVDVVTR--KVVREFWGH-GNRITDMTFSPDGRWLISASMD---STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGD 630 (910)
T ss_pred eEEEEEchhh--hhhHHhhcc-ccceeeeEeCCCCcEEEEeecC---CcEEEEeccCcceeeeEecCCcceeeEECCCCC
Confidence 4667777663 233334322 1223367899999999876553 347788888876222222222223345899998
Q ss_pred EEEEEEcC
Q 010654 89 HFFITRRS 96 (505)
Q Consensus 89 ~l~~~~~~ 96 (505)
.|+-....
T Consensus 631 ~LAT~Hvd 638 (910)
T KOG1539|consen 631 FLATVHVD 638 (910)
T ss_pred EEEEEEec
Confidence 88776643
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.18 E-value=40 Score=30.71 Aligned_cols=137 Identities=9% Similarity=0.125 Sum_probs=73.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
+.+|-+||+.+........|+..... ...+.+.-|||+++ +.+....-.|| |+.... ..++......+. .-..|
T Consensus 60 ~qhvRlyD~~S~np~Pv~t~e~h~kN-VtaVgF~~dgrWMy-TgseDgt~kIW--dlR~~~-~qR~~~~~spVn~vvlhp 134 (311)
T KOG0315|consen 60 NQHVRLYDLNSNNPNPVATFEGHTKN-VTAVGFQCDGRWMY-TGSEDGTVKIW--DLRSLS-CQRNYQHNSPVNTVVLHP 134 (311)
T ss_pred CCeeEEEEccCCCCCceeEEeccCCc-eEEEEEeecCeEEE-ecCCCceEEEE--eccCcc-cchhccCCCCcceEEecC
Confidence 56788999988755566667654322 22445678999864 33333333444 444443 333332221211 22455
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEE-EecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~-~~~~~~~~l~~~~~~~ 156 (505)
.-..|+ ..+. .+++.+.|+.+-.-.. .+.+..+..+.++....|+-.++ .+.. ...+++++-.
T Consensus 135 nQteLi-s~dq----sg~irvWDl~~~~c~~-~liPe~~~~i~sl~v~~dgsml~a~nnk--G~cyvW~l~~ 198 (311)
T KOG0315|consen 135 NQTELI-SGDQ----SGNIRVWDLGENSCTH-ELIPEDDTSIQSLTVMPDGSMLAAANNK--GNCYVWRLLN 198 (311)
T ss_pred CcceEE-eecC----CCcEEEEEccCCcccc-ccCCCCCcceeeEEEcCCCcEEEEecCC--ccEEEEEccC
Confidence 544444 3322 2478888886511122 33344456788888877754444 3433 4567888753
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=81.94 E-value=2.4 Score=41.73 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
..+.+.+.+..|+++.--..-+|.|+|||.||.++..+|.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3455666677776652211237999999999999888775
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=81.94 E-value=5.6 Score=43.11 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=57.5
Q ss_pred EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCc
Q 010654 24 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNS 102 (505)
Q Consensus 24 ~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~ 102 (505)
.++.+.+.+ ..++.||||+++++-.+ ..+.+.+.|..+.+..+.+-.+..-+ -..|.|-|++|+-.+++.
T Consensus 123 ~~l~~H~~D-V~Dv~Wsp~~~~lvS~s---~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr----- 193 (942)
T KOG0973|consen 123 SILRGHDSD-VLDVNWSPDDSLLVSVS---LDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR----- 193 (942)
T ss_pred EEEecCCCc-cceeccCCCccEEEEec---ccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCc-----
Confidence 455554332 34789999999875332 23457777777654233333222111 135999999888776541
Q ss_pred eEEEeeCCCCCCceEEEcCCCC-----ceeeEEEEeCCEEEEEE
Q 010654 103 ELLACPVDNTSETTVLIPHRES-----VKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~d~l~~~~ 141 (505)
.|.+....+.+... .++..++ ..+..++|++|+-+++.
T Consensus 194 tikvwrt~dw~i~k-~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973|consen 194 TLKVWRTSDWGIEK-SITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred eEEEEEcccceeeE-eeccchhhCCCcceeeecccCCCcCeecc
Confidence 23333322222222 3333322 23456788888655543
|
|
| >KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=81.57 E-value=98 Score=34.87 Aligned_cols=60 Identities=10% Similarity=0.079 Sum_probs=39.4
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRS 96 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~ 96 (505)
..+++..--|+..|++... ..++.++|.++.. +..+..-..|+.. +||||++.+++.+..
T Consensus 70 ~i~s~~fl~d~~~i~v~~~---~G~iilvd~et~~-~eivg~vd~GI~aaswS~Dee~l~liT~~ 130 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITA---LGDIILVDPETLE-LEIVGNVDNGISAASWSPDEELLALITGR 130 (1265)
T ss_pred ceEEEEEecccceEEEEec---CCcEEEEcccccc-eeeeeeccCceEEEeecCCCcEEEEEeCC
Confidence 3344455555555554433 2357777887775 6666666667664 499999999999875
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=80.94 E-value=2.7 Score=42.41 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
-+++.+.+..+++...-..-+|.|+|||+||.++..++..
T Consensus 311 reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 311 SESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3556666666665422112479999999999998877653
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=80.84 E-value=3.1 Score=36.21 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=39.2
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHh
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS-KSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++|-|-|+.|+++.+.|+....+... |.+......-..++.||.+ ..+..-+.+-+-.+.+|+.++
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~--glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCT--GLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhc--CCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 49999999999999999876544322 2232222233334899954 333322233345577787653
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4 | Back alignment and domain information |
|---|
Probab=80.51 E-value=12 Score=28.20 Aligned_cols=54 Identities=9% Similarity=0.106 Sum_probs=33.4
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 64 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~ 64 (505)
...-+|+.||..|+ +.+.+.++ -.|--+++.|||+++|++.-.. ..+|..+-++
T Consensus 34 ~~~GRll~ydp~t~--~~~vl~~~--L~fpNGVals~d~~~vlv~Et~--~~Ri~rywl~ 87 (89)
T PF03088_consen 34 RPTGRLLRYDPSTK--ETTVLLDG--LYFPNGVALSPDESFVLVAETG--RYRILRYWLK 87 (89)
T ss_dssp ---EEEEEEETTTT--EEEEEEEE--ESSEEEEEE-TTSSEEEEEEGG--GTEEEEEESS
T ss_pred CCCcCEEEEECCCC--eEEEehhC--CCccCeEEEcCCCCEEEEEecc--CceEEEEEEe
Confidence 34568999999885 34455543 3355588999999999887543 3445555444
|
3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=80.24 E-value=44 Score=32.21 Aligned_cols=129 Identities=12% Similarity=0.074 Sum_probs=65.9
Q ss_pred CcEEEEEecc--ccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcC----CCCCC-ceEEEeeCCCCC-C
Q 010654 43 KKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS----DELFN-SELLACPVDNTS-E 114 (505)
Q Consensus 43 g~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~----~~~~~-~~l~~~~~~~~~-~ 114 (505)
-+++++.-.. +-.+++|++|.++++ ..=..+..-......||||+.+|..+.- ..+.. .-|-.+|..+.. .
T Consensus 2 ~~rvyV~D~~~~~~~~rv~viD~d~~k-~lGmi~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~ 80 (342)
T PF06433_consen 2 AHRVYVQDPVFFHMTSRVYVIDADSGK-LLGMIDTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPT 80 (342)
T ss_dssp TTEEEEEE-GGGGSSEEEEEEETTTTE-EEEEEEEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred CcEEEEECCccccccceEEEEECCCCc-EEEEeecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCccc
Confidence 3455555332 234689999999875 3222221111123489999999876542 11122 345567776632 1
Q ss_pred ceEEEcCCCCc----eeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeee
Q 010654 115 TTVLIPHRESV----KLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179 (505)
Q Consensus 115 ~~~~~~~~~~~----~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (505)
.+..++..... ....+..+.| +.+++.+..-...+.++|+.. ++.+ .++..|+|...+
T Consensus 81 ~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~-~kvv------~ei~~PGC~~iy 143 (342)
T PF06433_consen 81 GEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAA-KKVV------GEIDTPGCWLIY 143 (342)
T ss_dssp EEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTT-TEEE------EEEEGTSEEEEE
T ss_pred ceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCC-Ccee------eeecCCCEEEEE
Confidence 12255543111 1123455544 455566666566788898863 2211 456777776543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.21 E-value=51 Score=30.74 Aligned_cols=152 Identities=8% Similarity=0.016 Sum_probs=0.0
Q ss_pred CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE-eeeeCCEEEEEEcCCCC
Q 010654 21 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDEL 99 (505)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~~~~ 99 (505)
..++++.+...-.+ ...|++|+|+|+ +......|.+.|.-+..+...+.-....+-.. ++|.|+.++--.-+
T Consensus 46 ~~rr~LkGH~~Ki~-~~~ws~Dsr~iv---SaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLd--- 118 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIY-AMDWSTDSRRIV---SASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLD--- 118 (343)
T ss_pred eeEEEeccccccee-eeEecCCcCeEE---eeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcC---
Q ss_pred CCceEEEeeCC--CCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCC
Q 010654 100 FNSELLACPVD--NTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDP 175 (505)
Q Consensus 100 ~~~~l~~~~~~--~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (505)
+.--+|.+... + +..+. .++..... ++.....+|.-+++..-+ ..-.+|++++ |. ....|.+.
T Consensus 119 N~Csiy~ls~~d~~-g~~~v~r~l~gHtgy-lScC~f~dD~~ilT~SGD--~TCalWDie~-g~--------~~~~f~GH 185 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAE-GNVRVSRELAGHTGY-LSCCRFLDDNHILTGSGD--MTCALWDIET-GQ--------QTQVFHGH 185 (343)
T ss_pred ceeEEEeccccccc-ccceeeeeecCccce-eEEEEEcCCCceEecCCC--ceEEEEEccc-ce--------EEEEecCC
Q ss_pred eeeecCCCCcc-cCCEEE
Q 010654 176 VYSIDPSESVF-SSRILR 192 (505)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~ 192 (505)
..++-+++++| ++++++
T Consensus 186 ~gDV~slsl~p~~~ntFv 203 (343)
T KOG0286|consen 186 TGDVMSLSLSPSDGNTFV 203 (343)
T ss_pred cccEEEEecCCCCCCeEE
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 505 | ||||
| 2xe4_A | 751 | Structure Of Oligopeptidase B From Leishmania Major | 1e-114 | ||
| 3mun_A | 693 | Appep_pepclose Closed State Length = 693 | 1e-49 | ||
| 3iun_A | 693 | Appep_d622n Opened State Length = 693 | 2e-48 | ||
| 3ivm_A | 693 | Appep_wt+pp Closed State Length = 693 | 9e-48 | ||
| 3iuj_A | 693 | Appep_wt2 Opened State Length = 693 | 9e-48 | ||
| 2bkl_A | 695 | Structural And Mechanistic Analysis Of Two Prolyl E | 2e-46 | ||
| 1yr2_A | 741 | Structural And Mechanistic Analysis Of Two Prolyl E | 6e-44 | ||
| 3ddu_A | 709 | Prolyl Oligopeptidase With Gsk552 Length = 709 | 3e-42 | ||
| 1qfm_A | 710 | Prolyl Oligopeptidase From Porcine Muscle Length = | 9e-42 | ||
| 1qfs_A | 710 | Prolyl Oligopeptidase From Porcine Muscle With Cova | 2e-41 | ||
| 1vz2_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Y73c/v427 | 3e-41 | ||
| 1vz3_A | 710 | Prolyl Oligopeptidase From Porcine Brain, T597c Mut | 3e-41 | ||
| 1e8m_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Mutant, C | 4e-41 | ||
| 1h2x_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Y473f Mut | 5e-41 | ||
| 1o6g_A | 710 | Prolyl Oligopeptidase From Porcine Brain, D641n Mut | 6e-41 | ||
| 1e5t_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Mutant Le | 6e-41 | ||
| 1o6f_A | 710 | Prolyl Oligopeptidase From Porcine Brain, D641a Mut | 1e-40 | ||
| 4ax4_A | 710 | Prolyl Oligopeptidase From Porcine Brain, H680a Mut | 3e-40 | ||
| 4hvt_A | 711 | Structure Of A Post-Proline Cleaving Enzyme From Ri | 9e-36 | ||
| 1ve6_A | 582 | Crystal Structure Of An Acylpeptide HydrolaseESTERA | 2e-04 | ||
| 3o4h_A | 582 | Structure And Catalysis Of Acylaminoacyl Peptidase | 2e-04 | ||
| 3o4j_A | 582 | Structure And Catalysis Of Acylaminoacyl Peptidase | 2e-04 | ||
| 2qzp_A | 562 | Crystal Structure Of Mutation Of An Acylptide Hydro | 3e-04 | ||
| 2hu8_A | 582 | Binding Of Inhibitors By Acylaminoacyl Peptidase Le | 4e-04 | ||
| 2qr5_A | 582 | Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mut | 6e-04 |
| >pdb|2XE4|A Chain A, Structure Of Oligopeptidase B From Leishmania Major Length = 751 | Back alignment and structure |
|
| >pdb|3MUN|A Chain A, Appep_pepclose Closed State Length = 693 | Back alignment and structure |
|
| >pdb|3IUN|A Chain A, Appep_d622n Opened State Length = 693 | Back alignment and structure |
|
| >pdb|3IVM|A Chain A, Appep_wt+pp Closed State Length = 693 | Back alignment and structure |
|
| >pdb|3IUJ|A Chain A, Appep_wt2 Opened State Length = 693 | Back alignment and structure |
|
| >pdb|2BKL|A Chain A, Structural And Mechanistic Analysis Of Two Prolyl Endopeptidases: Role Of Inter-Domain Dynamics In Catalysis And Specificity Length = 695 | Back alignment and structure |
|
| >pdb|1YR2|A Chain A, Structural And Mechanistic Analysis Of Two Prolyl Endopeptidases: Role Of Inter-Domain Dynamics In Catalysis And Specificity Length = 741 | Back alignment and structure |
|
| >pdb|3DDU|A Chain A, Prolyl Oligopeptidase With Gsk552 Length = 709 | Back alignment and structure |
|
| >pdb|1QFM|A Chain A, Prolyl Oligopeptidase From Porcine Muscle Length = 710 | Back alignment and structure |
|
| >pdb|1QFS|A Chain A, Prolyl Oligopeptidase From Porcine Muscle With Covalently Bound Inhibitor Z-Pro-Prolinal Length = 710 | Back alignment and structure |
|
| >pdb|1VZ2|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Y73c/v427c/c255t Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1VZ3|A Chain A, Prolyl Oligopeptidase From Porcine Brain, T597c Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1E8M|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Mutant, Complexed With Inhibitor Length = 710 | Back alignment and structure |
|
| >pdb|1H2X|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Y473f Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1O6G|A Chain A, Prolyl Oligopeptidase From Porcine Brain, D641n Mutant With Bound Peptide Ligand Suc-Gly-Pro Length = 710 | Back alignment and structure |
|
| >pdb|1E5T|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1O6F|A Chain A, Prolyl Oligopeptidase From Porcine Brain, D641a Mutant With Bound Peptide Ligand Suc-Gly-Pro Length = 710 | Back alignment and structure |
|
| >pdb|4AX4|A Chain A, Prolyl Oligopeptidase From Porcine Brain, H680a Mutant Length = 710 | Back alignment and structure |
|
| >pdb|4HVT|A Chain A, Structure Of A Post-Proline Cleaving Enzyme From Rickettsia Typhi Length = 711 | Back alignment and structure |
|
| >pdb|1VE6|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM Aeropyrum Pernix K1 Length = 582 | Back alignment and structure |
|
| >pdb|3O4H|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|3O4J|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|2QZP|A Chain A, Crystal Structure Of Mutation Of An Acylptide HydrolaseESTERASE FROM AEROPYRUM PERNIX K1 Length = 562 | Back alignment and structure |
|
| >pdb|2HU8|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|2QR5|A Chain A, Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mutant Length = 582 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 505 | |||
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 0.0 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 0.0 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 0.0 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 0.0 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 0.0 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 7e-27 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 1e-23 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 3e-13 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 9e-13 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 7e-12 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 9e-11 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 5e-10 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 7e-10 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 1e-08 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 3e-08 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 3e-08 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 5e-08 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 1e-07 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 3e-07 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 3e-07 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 4e-05 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 3e-04 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 3e-04 |
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} Length = 751 | Back alignment and structure |
|---|
Score = 716 bits (1850), Expect = 0.0
Identities = 223/512 (43%), Positives = 303/512 (59%), Gaps = 10/512 (1%)
Query: 2 DEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL 61
DE LR +K W H + QS D+CLY E + ++S + + L I S+S T V L
Sbjct: 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLL 300
Query: 62 DVSKPE---ELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE-TT 116
D+ K L ++ PR GV H +H I N +LL P S+ +
Sbjct: 301 DLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSH 360
Query: 117 VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 176
VL+ H E V ++ I + ++L V R GL +I T + K+ G + V +P+
Sbjct: 361 VLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPI 420
Query: 177 YSIDPSESV---FSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFT 233
+++ ES + R YSSL TP + +D K+ V GGFD NY
Sbjct: 421 FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAANYKV 480
Query: 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF 293
ER++A+A D T+IP+ +VY K+L + P +LYGYGSY + DP F+ L DRG
Sbjct: 481 ERRFATAPDQTKIPLSVVYHKDL-DMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGM 539
Query: 294 IFAIAQIRGGGELGRQWYENG-KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAG 352
IFAIA IRGG ELGR WYE G K+L K+NTF+DFIA AE+L+ T +L EGRSAG
Sbjct: 540 IFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAG 599
Query: 353 GLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKS 412
GLL+GAVLNMRPDLFK A+A VPFVDV+TTM DP+IPLTT EWEEWG+P + ++Y YM S
Sbjct: 600 GLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLS 659
Query: 413 YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472
YSP+DNV+AQ YP+I+V GL+DPRV Y EPAK+V+KLRE KTD+N +L ++ +GHFS
Sbjct: 660 YSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFS 719
Query: 473 KSGRFERLREAAFTYTFLMRALSMLPSVGSEQ 504
R++ +E+A F+ + L + +
Sbjct: 720 AKDRYKFWKESAIQQAFVCKHLKSTVRLLVRR 751
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Length = 695 | Back alignment and structure |
|---|
Score = 646 bits (1669), Expect = 0.0
Identities = 132/509 (25%), Positives = 227/509 (44%), Gaps = 21/509 (4%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESKITRFVF 59
+DE H L + S D ++ D L S K+LF+ +
Sbjct: 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDV 254
Query: 60 YLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET--TV 117
Y ++ R+L + VG + F++ + + +
Sbjct: 255 YWKRPGEKDFRLL-VKGVGAKYEVHAWKDRFYV-LTDEGAPRQRVFEVDPAKPARASWKE 312
Query: 118 LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177
++P S L + + HL++ + ++ L G+P+++ V+
Sbjct: 313 IVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK--GKPVRT------VQLPGVGA 364
Query: 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKW 237
+ + + ++S TP +Y + G S L V + Y E+ +
Sbjct: 365 ASNLMGL-EDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDV--PMNPEQYQVEQVF 421
Query: 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAI 297
++ DGT++P+ +V+RK+L K DG+ P LLYGYG + + + F SS L LD G ++A+
Sbjct: 422 YASKDGTKVPMFVVHRKDL-KRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAV 480
Query: 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357
A +RGGGE G+ W++ G+ KK+N F DF A AEYL++ Y ++L I G S GGLL+G
Sbjct: 481 ANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVG 540
Query: 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417
A + RP+L+ A V AVP +D++ L + E+ P E + + +YSP
Sbjct: 541 AAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKP---EDFKTLHAYSPYH 597
Query: 418 NVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476
+V+ YP +L+ A +D RV KFVA ++ + L + E AGH
Sbjct: 598 HVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQV 657
Query: 477 FERLREAAFTYTFLMRALSMLPSVGSEQS 505
+ + + Y+FL + L + + G +
Sbjct: 658 AKAIESSVDLYSFLFQVLDVQGAQGGVAA 686
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* Length = 693 | Back alignment and structure |
|---|
Score = 639 bits (1650), Expect = 0.0
Identities = 136/502 (27%), Positives = 232/502 (46%), Gaps = 28/502 (5%)
Query: 2 DEILRPDKAWLHKLEADQSNDICLYHEKDDIY--SLGLQASESKKFLFIASESKITRF-V 58
K + H+L Q +D ++ + +G +E +FL I++ + + +
Sbjct: 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL 261
Query: 59 FYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET-- 115
+ D+S+ L + + + ++G+ ++ D N L+ N
Sbjct: 262 YVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDA-PNRRLVTVDAANPGPAHW 320
Query: 116 TVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDP 175
LIP R+ V + +L ++ + +G + E P
Sbjct: 321 RDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF----------DYEGKRVREVALP 368
Query: 176 -VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTE 234
+ S+ L F + + PP++Y ++ G L + F +Y +E
Sbjct: 369 GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAA--PFKPEDYVSE 426
Query: 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI 294
+++ + DGT++P+ I YRK L KLDGS+P +LYGYG +++ P+F+ S + LD G +
Sbjct: 427 QRFYQSKDGTRVPLIISYRKGL-KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGV 485
Query: 295 FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGL 354
+A+A +RGGGE G+ W+ G K+N F DFIA AEYL Y ++L I G S GGL
Sbjct: 486 YAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGL 545
Query: 355 LIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW-KEEFYFYMKSY 413
L+GAV+ RPDL + A+P V VL + T T ++G E + Y+K Y
Sbjct: 546 LVGAVMTQRPDLMR---VALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDYLKGY 602
Query: 414 SPVDNVK-AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472
SP+ NV+ +YP +VT +D RV+ + KF A L+ + L + E AGH +
Sbjct: 603 SPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGA 662
Query: 473 KSGRFERLREAAFTYTFLMRAL 494
+ + + ++A Y F + +
Sbjct: 663 GTPVAKLIEQSADIYAFTLYEM 684
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* Length = 710 | Back alignment and structure |
|---|
Score = 628 bits (1621), Expect = 0.0
Identities = 134/520 (25%), Positives = 228/520 (43%), Gaps = 40/520 (7%)
Query: 2 DEILRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESKITR--FV 58
K + H L DQS DI D+ + G + S+ +++ ++ +
Sbjct: 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRL 261
Query: 59 FYLDVSKPE-ELRVLTPRVVGVDT------AASHRGNHFFITRRSDELFNSELLACPVDN 111
+Y D+ + + + V +D ++ G F N L+ +
Sbjct: 262 WYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSP-NYRLINIDFTD 320
Query: 112 TSET--TVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGK 168
E+ VL+P E L+ + + L + + + L G
Sbjct: 321 PEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH----------DLATGA 370
Query: 169 SVE-FIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKI-ETVLGGF 226
++ F V S+ + + ++S +P +Y D+ + E + G
Sbjct: 371 LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGI 430
Query: 227 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRL 286
D ++Y T + + + DGT+IP+ IV++K + KLDGS P LYGYG + I P ++ SRL
Sbjct: 431 DASDYQTVQIFYPSKDGTKIPMFIVHKKGI-KLDGSHPAFLYGYGGFNISITPNYSVSRL 489
Query: 287 SLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 345
+ G + A+A IRGGGE G W++ G K+N F DF AEYLIK Y + ++L
Sbjct: 490 IFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLT 549
Query: 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 405
I G S GGLL+ N RPDLF +A V +D+L + A ++G ++
Sbjct: 550 INGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFH---KYTIGHAWTTDYGCSDSKQ 606
Query: 406 FYFYMKSYSPVDNVKAQ-----NYPHILVTAGLNDPRVMYSEPAKFVAKLREM----KTD 456
+ ++ YSP+ NVK YP +L+ +D RV+ KF+A L+ + +
Sbjct: 607 HFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQ 666
Query: 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496
+N LL + AGH + + + E + + F+ R L++
Sbjct: 667 NNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} Length = 741 | Back alignment and structure |
|---|
Score = 612 bits (1580), Expect = 0.0
Identities = 133/505 (26%), Positives = 213/505 (42%), Gaps = 26/505 (5%)
Query: 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESKITRF-- 57
+ WLH+L QS D ++ + G S +++ I S
Sbjct: 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNT 295
Query: 58 VFYLDVSKPE--ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE- 114
V V+ + + L P + G+ + D +++ + ++
Sbjct: 296 VHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWF-VSGDGAPLKKIVRVDLSGSTPR 354
Query: 115 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID 174
++P + L+ + + + L ++ + L G+P + V
Sbjct: 355 FDTVVPESKDN-LESVGIAGNRLFASYIHDAKSQVLAFDLD--GKPAGA------VSLPG 405
Query: 175 PVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTE 234
+ S +SS P +V D + + V FD ++ E
Sbjct: 406 IGSASGLSGRPGDRH-AYLSFSSFTQPATVLALDPATAKTTPWE--PVHLTFDPADFRVE 462
Query: 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI 294
+ + + DGT++P+ IV RK+ G P LLYGYG + + P F++ ++ +D G
Sbjct: 463 QVFYPSKDGTKVPMFIVRRKDA---KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGA 519
Query: 295 FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGL 354
FA+A +RGGGE G W++ G+ KK+N F DFIA E+LI N + L IEG S GGL
Sbjct: 520 FALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGL 579
Query: 355 LIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYS 414
LIGAV N RPDLF AA AV +D + +++G P KE + ++ YS
Sbjct: 580 LIGAVTNQRPDLFAAASPAVGVMD---MLRFDQFTAGRYWVDDYGYPEKEADWRVLRRYS 636
Query: 415 PVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473
P NV++ +YP ILVT D RV+ K+ A L+ L + E AGH S
Sbjct: 637 PYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSG 696
Query: 474 SGRFERLREAAFTYTFLMRALSMLP 498
+++ E A FL + P
Sbjct: 697 KPIDKQIEETADVQAFLAHFTGLTP 721
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 7e-27
Identities = 64/345 (18%), Positives = 112/345 (32%), Gaps = 33/345 (9%)
Query: 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVL 223
+ G+ V+ P + +V +R + +S RT V + D G
Sbjct: 323 PESGELVDAAGPWTEWAATLTVSGTRAV-GVAASPRTAYEVVELDTVTG-RARTIGARHT 380
Query: 224 GGFDTNNYFT-ERKWASASDGTQIPICIVYRKNLVKLDGSD----PLLLYGYGSYEICND 278
D Y + + +A DG +I +Y + G P ++ +G
Sbjct: 381 DPVDPAYYPEPQIRTFTAPDGREIH-AHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP 439
Query: 279 PAFNSSRLSLLDRGFIFAIAQI--RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 336
+ RG +A + G GR + E + D A A L +
Sbjct: 440 AVLDLDVAYFTSRGI--GVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEE 497
Query: 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396
+ +L + G SAGG + L + D++ P +D+L T + +
Sbjct: 498 GTADRARLAVRGGSAGGWTAASSL-VSTDVYACGTVLYPVLDLLGWADGGTHDFESRYLD 556
Query: 397 EW-GDPWKE-EFYFYMKSYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451
G + E Y + +P D V+ P L+ GL DP + +F+ +
Sbjct: 557 FLIGSFEEFPERY---RDRAPLTRADRVRV---P-FLLLQGLEDPVCPPEQCDRFLEAVA 609
Query: 452 EMKTDDNILLFKCELGAGH-FSKSG-RFERLREAAFTYTFLMRAL 494
L F+ G GH F + L + +
Sbjct: 610 GCGVPHAYLSFE---GEGHGFRRKETMVRALEA---ELSLYAQVF 648
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 82/452 (18%), Positives = 139/452 (30%), Gaps = 64/452 (14%)
Query: 58 VFYLDVSKPEELRVLTPRVVGVDTAA-SHRGNHFFITRRSDELFNSELLACPVDNTSETT 116
+F ++ LRV +A+ S + E + L+ + S
Sbjct: 177 LFTSNL-SSGGLRVFDSGEGSFSSASISPGMKVTAGLETARE---ARLVTVDPRDGSVED 232
Query: 117 VLIPHRESVKLQDIQLFI------DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 170
+ +P ++ + + LAV R G + GE +++ QG
Sbjct: 233 LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-----GERVEAPQG---- 283
Query: 171 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNN 230
+ V L ++SL TPP + +E L +
Sbjct: 284 ---------NHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE-----PLLEGGLPEDLRRS 329
Query: 231 YFT-ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL 289
W + DG+++P V + P ++ +G + ++++ SL
Sbjct: 330 IAGSRLVWVESFDGSRVP-TYVLESG--RAPTPGPTVVLVHGGPFAEDSDSWDTFAASLA 386
Query: 290 DRGFIFAIAQI--RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE 347
GF + RG G +W D A A + ++ +L I
Sbjct: 387 AAGF--HVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGL--ASELYIM 442
Query: 348 GRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFY 407
G S GG + L M+P LFKA VA VD + G E
Sbjct: 443 GYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSR--EIM 500
Query: 408 FYMKSYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464
+S SP VD +K P + + N R + + +L +
Sbjct: 501 ---RSRSPINHVDRIKE---P-LALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIP- 552
Query: 465 ELGAGH-FSKSG-RFERLREAAFTYTFLMRAL 494
AGH + + L A FL
Sbjct: 553 --DAGHAINTMEDAVKILLPAV---FFLATQR 579
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 3e-13
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 40/243 (16%)
Query: 264 PLLLY--GYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRG-GGELGRQWYENGKFLKK- 319
P ++ GY + + ++ G+ +RG +G L
Sbjct: 83 PAIVKYHGYNA----SYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWM 138
Query: 320 ------------KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLF 367
+ + D + E + + ++ + G S GG L A +
Sbjct: 139 TKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-P 197
Query: 368 KAAVAAVPFVDVLTTMLDPTIPLTTAE----WEEWGDPWKEEFYFYMKSY-SP---VDNV 419
KAAVA P++ +D + E + G P E SY D V
Sbjct: 198 KAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRV 257
Query: 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH-FSKSGRFE 478
K P +L++ GL D S L K + +++ GH + + + E
Sbjct: 258 KV---P-VLMSIGLIDKVTPPSTVFAAYNHLETKKE---LKVYR---YFGHEYIPAFQTE 307
Query: 479 RLR 481
+L
Sbjct: 308 KLA 310
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 9e-13
Identities = 43/260 (16%), Positives = 85/260 (32%), Gaps = 50/260 (19%)
Query: 264 PLLLY--GYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRG----------------GGE 305
P L+ GY S + +L+ + GF +RG G
Sbjct: 109 PALIRFHGYSSN-----SGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGH 163
Query: 306 LGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD 365
+ R ++ + ++ F D A ++ ++++ + G S GG L A + P
Sbjct: 164 IIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR 223
Query: 366 LFKAAVAAVPFVDVLTTMLDPTIPLTT----AEWEEWGDPWKE---EFYFYMKSYSPV-- 416
+ V+ PF+ + D + ++ DP E E + +
Sbjct: 224 -VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNL 282
Query: 417 -DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG 475
+K +L+ GL D S A +++ +I ++ GH G
Sbjct: 283 AKRIKG----DVLMCVGLMDQVCPPST---VFAAYNNIQSKKDIKVYP---DYGHEPMRG 332
Query: 476 RFERLREAAFTYTFLMRALS 495
+ + F++ S
Sbjct: 333 FGDLAMQ------FMLELYS 346
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 7e-12
Identities = 27/208 (12%), Positives = 53/208 (25%), Gaps = 18/208 (8%)
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE 347
+ G I +RG + D A + L Y + +
Sbjct: 51 AVGLGCICMTFDLRGHEGYASMRQSVTRA----QNLDDIKAAYDQLASLPYVDAHSIAVV 106
Query: 348 GRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFY 407
G S GG L + RP + A + + D ++ +
Sbjct: 107 GLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSL------NADPDLMDYRRRA 160
Query: 408 FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467
+ +L+ ND V + + ++ + ++ G
Sbjct: 161 LAPGDNLALAACAQYKGD-VLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIA----G 215
Query: 468 AGH-FSKSGRFERLREAAFTYTFLMRAL 494
A H S + A +L +
Sbjct: 216 ADHALSVKEHQQEYTRA--LIDWLTEMV 241
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 9e-11
Identities = 35/197 (17%), Positives = 62/197 (31%), Gaps = 14/197 (7%)
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE 347
+LDRG A G GE+ G + A + L K + + +
Sbjct: 175 VLDRGMATATFDGPGQGEMFEYKRIAG------DYEKYTSAVVDLLTKLEAIRNDAIGVL 228
Query: 348 GRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFY 407
GRS GG P A ++ F D+ L+ + + ++ D +E
Sbjct: 229 GRSLGGNYALKSAACEPR-LAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARL 287
Query: 408 FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467
+ D + P + G++D V S + + N+++ K
Sbjct: 288 HVHAALETRDVLSQIACP-TYILHGVHD-EVPLSFVDTVLELVP--AEHLNLVVEK---D 340
Query: 468 AGHFSKSGRFERLREAA 484
H + E A
Sbjct: 341 GDHCCHNLGIRPRLEMA 357
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 5e-10
Identities = 37/180 (20%), Positives = 56/180 (31%), Gaps = 18/180 (10%)
Query: 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 379
+ FTD + E +E++ I G S GG + AV + KA + VPF+
Sbjct: 170 RRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK-AKALLCDVPFLCH 228
Query: 380 LTTMLDPTIPLTTAEWEEW--GDPWKEEFYF----YMKSYSPVDNVKAQNYPHILVTAGL 433
+ AE + KEE F Y + K P L + GL
Sbjct: 229 FRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKI---P-ALFSVGL 284
Query: 434 NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493
D S A I ++ H G F+ + + F +
Sbjct: 285 MDNICPPST---VFAAYNYYAGPKEIRIYP---YNNHEG-GGSFQAVEQVKFLKKLFEKG 337
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 58.6 bits (141), Expect = 7e-10
Identities = 32/210 (15%), Positives = 57/210 (27%), Gaps = 24/210 (11%)
Query: 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL--GRQWYENGKFLK--KK 320
L L+G + +RGF+ GE ++ ++++ +
Sbjct: 28 LALHGLQGSKEHILALLPG----YAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYR 83
Query: 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 380
+ L + G S G + +L
Sbjct: 84 VALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLA--------- 134
Query: 381 TTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMY 440
+ P+ + + DP Y P +A +L G D V
Sbjct: 135 --FIGSGFPMKLPQGQVVEDPGVLALY----QAPPATRGEAYGGVPLLHLHGSRDHIVPL 188
Query: 441 SEPAKFVAKLREMKTDDNILLFKCELGAGH 470
+ K + LR + + F E GAGH
Sbjct: 189 ARMEKTLEALRPHYPEGRLARFVEE-GAGH 217
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 34/232 (14%), Positives = 66/232 (28%), Gaps = 23/232 (9%)
Query: 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRF------HYSSLRTPPSVYDYDMDMGISVL 216
S+ + + +++ + P S
Sbjct: 390 SIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTD----- 444
Query: 217 KKIETVLGGFDTNNYFTERKWAS------ASDGTQIPICIVYRKNLVKLDGSDPLLLYGY 270
++I+ + + N + D + ++ + PLL+ Y
Sbjct: 445 QEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQFDR-SKKYPLLIQVY 503
Query: 271 G---SYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK-KKNTFTDF 326
G S + + A N G + A+ RG G + + K D
Sbjct: 504 GGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKL-LYAVYRKLGVYEVEDQ 562
Query: 327 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378
I I+ + ++++ I G S GG + L LFK +A P
Sbjct: 563 ITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSS 614
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 27/197 (13%)
Query: 194 HYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDG-TQIPICIVY 252
+ S P V ++ G L + + G+ T A+DG T + +
Sbjct: 418 IFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAMPEIRTGT--IMAADGQTPLYYKLTM 475
Query: 253 RKNLVKLDGSD--PLLLYGYG---SYEICNDPAFNSSRL----SLLDRGFIFAIAQI--R 301
+ D + P+++Y YG + + + SS + +G+ + + R
Sbjct: 476 PLHF---DPAKKYPVIVYVYGGPHAQLVTK--TWRSSVGGWDIYMAQKGYA--VFTVDSR 528
Query: 302 GGGELGRQWYENGKFLKKK---NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358
G G + + + ++ D + ++L + +++ + G S GG +
Sbjct: 529 GSANRGAAFE---QVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTN 585
Query: 359 VLNMRPDLFKAAVAAVP 375
++ D+FK VA P
Sbjct: 586 LMLTHGDVFKVGVAGGP 602
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 54/352 (15%), Positives = 108/352 (30%), Gaps = 76/352 (21%)
Query: 87 GNHFFIT---RRSDELFNSELLACPVDNTSETTVLIPHRES----VKLQDIQLFID---- 135
H R +L +L+ + + + + E+ V L + F+D
Sbjct: 297 PQHLSFQRQSRDQKKL---DLVEVTLASNQQRVL---AHETSPTWVPLHNSLRFLDDGSI 350
Query: 136 ----------HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFI----DP----VY 177
HL + +G +T V E L + F +Y
Sbjct: 351 LWSSERTGFQHLYRIDSKGKAAALTHGNWS-VDELLAVDEKAGLAYFRAGIESARESQIY 409
Query: 178 SIDPSES--------------VFSS--RILRFHYSSLRTPPSVYDYDMDMGISV------ 215
++ F+ + +S+ TPP + + +
Sbjct: 410 AVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVEND 469
Query: 216 LKKIETVLGGFDTNNYFTERKWASASDG-TQIPICIVYRKNLVKLDGSD--PLLLYGYG- 271
L + + E +A+DG T + ++ D + P+ +Y YG
Sbjct: 470 LADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGF---DPAKRYPVAVYVYGG 526
Query: 272 --SYEICNDPAFNSSRL---SLLDRGFIFAIAQI--RGGGELGRQWYENGKFLK-KKNTF 323
S + + L L +G++ + + RG GR + + K
Sbjct: 527 PASQTVTDSWPGRGDHLFNQYLAQQGYV--VFSLDNRGTPRRGRDF-GGALYGKQGTVEV 583
Query: 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375
D + +L + + ++ ++G S GG + +L D + VA P
Sbjct: 584 ADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAP 635
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 5e-08
Identities = 35/228 (15%), Positives = 65/228 (28%), Gaps = 32/228 (14%)
Query: 258 KLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGRQWYENGKF 316
G P ++ +G+ R SLL +GF +L +
Sbjct: 169 PEPGPFPGIVDMFGT-----GGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLH-- 221
Query: 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376
F YL+ + + + G S GG L ++ + + A V
Sbjct: 222 ------LEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSV 275
Query: 377 VDVLTTML-----DPTIPLTTAEWEEWGDPWKEEFYFY--------MKSYSPVDNVKAQN 423
+V T+ P + + + D + + KS+ PV+ ++
Sbjct: 276 ANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAES-- 333
Query: 424 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471
L G +D A K + + GH+
Sbjct: 334 --TFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYP-ETGHY 378
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 30/145 (20%), Positives = 48/145 (33%), Gaps = 10/145 (6%)
Query: 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYG---SYEICNDPAFNSSRLSLLDRGFIFA 296
+ T+ ++ + K PLLL Y S + N + I A
Sbjct: 480 ILNETKFWYQMILPPHFDK-SKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVA 538
Query: 297 IAQIRGGGELGRQWYENGKFLKKK---NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGG 353
RG G G + + ++ D I A K + +++ I G S GG
Sbjct: 539 SFDGRGSGYQGDKIM---HAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGG 595
Query: 354 LLIGAVLNMRPDLFKAAVAAVPFVD 378
+ VL +FK +A P
Sbjct: 596 YVTSMVLGSGSGVFKCGIAVAPVSR 620
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 34/214 (15%), Positives = 64/214 (29%), Gaps = 31/214 (14%)
Query: 185 VFSSRILRF--HYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWAS--- 239
FS + F P D KK+ + +R+
Sbjct: 416 SFSHSMDFFLLKCEGPGVPMVTVHNTTDK-----KKMFDLETNEHVKKAINDRQMPKVEY 470
Query: 240 ---ASDGTQIPICIVYRKNLVKLDGSD--PLLLYGYG---SYEICNDPAFNSSRLSLLDR 291
D +P+ I+ + PLLL G S + + + +
Sbjct: 471 RDIEIDDYNLPMQILKPATF---TDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSH 527
Query: 292 GFIFAIAQIRGGGELGRQWYENGKFLKKK---NTFTDFIACAEYLIKNCYCTKEKLCIEG 348
G + RG G G + ++++ D + ++K Y + ++ + G
Sbjct: 528 GAVVVKCDGRGSGFQGTKLL---HEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFG 584
Query: 349 RSAGGLLIGAVLNMRPD----LFKAAVAAVPFVD 378
+ GG L +L + + F A P D
Sbjct: 585 KDYGGYLSTYILPAKGENQGQTFTCGSALSPITD 618
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 3e-07
Identities = 32/236 (13%), Positives = 66/236 (27%), Gaps = 32/236 (13%)
Query: 250 IVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGR 308
+ L G P ++ +G R SLL GF +L
Sbjct: 145 VRATLFLPPGPGPFPGIIDIFGI-----GGGLLEYRASLLAGHGFATLALAYYNFEDLPN 199
Query: 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 368
F Y++++ + + G S G + ++ + ++
Sbjct: 200 NMDNIS--------LEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSA 251
Query: 369 AAVAAVPFVDVLT--TMLDPTIP-----LTTAEWEEWGDPWKEEFY------FYMKSYSP 415
+ T +IP L + G + + S P
Sbjct: 252 TVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIP 311
Query: 416 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471
++ + IL+ G +D A+ V++ + + + G GH+
Sbjct: 312 IEKAQG----PILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYP-GTGHY 362
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 3e-07
Identities = 38/253 (15%), Positives = 67/253 (26%), Gaps = 48/253 (18%)
Query: 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLL--LYGYGSYEICNDPAFNSSR 285
+ F + G +IP + K++ D PL+ L+G G N +R
Sbjct: 140 IIDDFLAFTFKDPETGVEIPYRLFVPKDVNP-DRKYPLVVFLHGAGERGTDNYLQVAGNR 198
Query: 286 LSLL--------DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337
+++ Q + + + I L+
Sbjct: 199 GAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEY 258
Query: 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 397
+ ++ I G S GG + P+LF AA+
Sbjct: 259 NIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICG---------------------- 296
Query: 398 WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457
GD ++ + I V +DP V V KL E+
Sbjct: 297 GGDV------SKVERIKDI---------PIWVFHAEDDPVVPVENSRVLVKKLAEIGGKV 341
Query: 458 NILLFKCELGAGH 470
++ H
Sbjct: 342 RYTEYEKGFMEKH 354
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 8e-07
Identities = 66/515 (12%), Positives = 153/515 (29%), Gaps = 164/515 (31%)
Query: 1 MDEILRPDKAWL----HKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKIT 55
++E+LR + +L + S +Y E +D +Y ++++ F ++ ++
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY------NDNQVF----AKYNVS 132
Query: 56 RFVFYLDVSKP-EELRVLTPRVV--G----------VDTAASHR------GNHFFIT--- 93
R YL + + ELR V+ G +D S++ F++
Sbjct: 133 RLQPYLKLRQALLELRP-AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 94 -RRSDELFN-----SELLACPVDNTSETTVLIPHR-ESVKLQDIQLF-----------ID 135
+ + + + S+ + I R S++ + +L +
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251
Query: 136 HLAVYERE------GGLQKITTYRLPAVGEPLKSLQGGK-SVEFIDPVYSIDPSESVFSS 188
+ V + + + T R V + L + S++ + D +S+
Sbjct: 252 N--VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 189 --------------RILRFHYS----SLRTPPSVYDYDMDMGISVLKK-IETVLGGFDTN 229
S S+R + +D + L IE+ L +
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 230 ---NYFTERKWASASDGTQIP---ICIV----------------YRKNLVKLDGSDPLLL 267
F + + IP + ++ ++ +LV+ +
Sbjct: 370 EYRKMF--DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ-PKESTI 426
Query: 268 YGYGSY-----EICNDPA--------------FNSSRLSLL-DRGFIFA-----IAQIRG 302
Y ++ N+ A F+S L + ++ + I
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486
Query: 303 GGE--LGRQWYENGKFLKKK---------------NTFTDFIACAEYLIKNCYCTKEKLC 345
L R + + +FL++K NT Y+ N + +
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546
Query: 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 380
++ + + +L + + D+L
Sbjct: 547 --------AILDFLPKIEENLICS-----KYTDLL 568
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 1e-06
Identities = 95/572 (16%), Positives = 157/572 (27%), Gaps = 175/572 (30%)
Query: 12 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV 71
L E ++ +D S+ L E + T +F+ +SK EE
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSI-LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE--- 77
Query: 72 LTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQ-DI 130
+ + V R N+ F+ +E + T + I R+ +L D
Sbjct: 78 MVQKFVE----EVLRINYKFLMSP----IKTE----QRQPSMMTRMYIEQRD--RLYNDN 123
Query: 131 QLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ--------G----GKSVEFIDPVYS 178
Q+F + V R Q R + L L+ G GK+ +D V
Sbjct: 124 QVFAKY-NVS-RL---QPYLKLR-----QALLELRPAKNVLIDGVLGSGKTWVALD-VCL 172
Query: 179 IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWA 238
+ +I + + +P +VL+ ++ +L D N W
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPE-----------TVLEMLQKLLYQIDPN-------WT 214
Query: 239 SASDGTQ-IPICI--------------VYRKNLVKLDG-SDPLLLYGYGSYEICNDPAFN 282
S SD + I + I Y L+ L + + N AFN
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA---------KAWN--AFN 263
Query: 283 -SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341
S ++ L R + + T T L+K C
Sbjct: 264 LSCKILLTTRF--KQVTDFLSAATTTHISLD-----HHSMTLTPDEV-KSLLLKYLDCRP 315
Query: 342 EKLCIEGRSAGGL---LIGAVL---NMRPDLFKAAVAAVPFVDVLTTM-------LDPT- 387
+ L E + +I + D +K D LTT+ L+P
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH-----VNCDKLTTIIESSLNVLEPAE 370
Query: 388 ----------------IPLTTAE--WEE--WGDP----------------WKEEFYF--- 408
IP W + D KE
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
Query: 409 -YMKSYSPVDNVKAQNYPH-ILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN-ILLFKCE 465
Y++ ++N A H +V Y+ P F + D
Sbjct: 431 IYLELKVKLENEYAL---HRSIVDH--------YNIPKTFDSDDLIPPYLDQYFYSH--- 476
Query: 466 LGAGHFSK---SGRFERLREAAFTYTFLMRAL 494
+G H R R + FL + +
Sbjct: 477 IGH-HLKNIEHPERMTLFRMVFLDFRFLEQKI 507
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 4e-05
Identities = 36/257 (14%), Positives = 64/257 (24%), Gaps = 49/257 (19%)
Query: 260 DGSDPLLLY--GYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317
D + L+ G + + F S + + + + G G+ Q
Sbjct: 156 DKAQDTLIVVGGGDTS---REDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGL------ 206
Query: 318 KKKNTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376
F A ++ EK+ I G S GG + KA +A+ P
Sbjct: 207 ----HFEVDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDKR-IKAWIASTPI 261
Query: 377 VDVLTTML-------------------DPTIPLTTAEWEEWGDPWK------EEFYFYMK 411
DV T AE W+ +
Sbjct: 262 YDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVL 321
Query: 412 SYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468
+ + + L G + + + ++ D + F E GA
Sbjct: 322 EQAQIVDYNKIDVP----SLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGA 377
Query: 469 GHFSKSGRFERLREAAF 485
+ F + F
Sbjct: 378 DAHCQVNNFRLMHYQVF 394
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 24/178 (13%), Positives = 47/178 (26%), Gaps = 19/178 (10%)
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIE 347
L + G + + A L Y ++ +
Sbjct: 217 LAKHDIAMLTVDMPSVGYSSKYPLTE-------DYSRLHQAVLNELFSIPYVDHHRVGLI 269
Query: 348 GRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD--PTIPLTTAEW--EEWGDPWK 403
G GG + + + + KA V + + +P + G
Sbjct: 270 GFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVV 329
Query: 404 EEFYFY--MKSYS----PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT 455
+ + M ++S + + P IL + DP YS+ + VA
Sbjct: 330 DIYSLSGQMAAWSLKVQGFLSSRKTKVP-ILAMSLEGDPVSPYSD-NQMVAFFSTYGK 385
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 Length = 615 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 18/165 (10%)
Query: 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLL----YGYGSYEICNDPAFNS 283
+N+Y DG ++ ++ K + P++L Y
Sbjct: 20 SNDYIKREVMIPMRDGVKL-HTVIVLP---KGAKNAPIVLTRTPYDASGRTERLASPHMK 75
Query: 284 SRLS-----LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF-----TDFIACAEYL 333
LS ++ G+I +RG + N TD ++L
Sbjct: 76 DLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWL 135
Query: 334 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378
+KN + K+ + G S G + L K AV P +D
Sbjct: 136 VKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 505 | |||
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 100.0 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 100.0 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 100.0 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 100.0 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 100.0 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 100.0 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 100.0 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 100.0 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 100.0 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 100.0 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 100.0 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 100.0 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 100.0 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.95 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.94 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.94 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.93 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.93 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.93 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.93 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.92 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.92 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.92 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.92 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.91 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.91 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.91 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.91 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.91 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.9 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.9 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.9 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.9 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.9 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.9 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.9 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.9 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.9 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.89 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.89 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.89 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.89 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.89 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.89 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.89 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.88 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.88 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.88 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.88 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.88 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.88 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.88 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.88 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.88 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.88 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.87 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.87 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.87 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.87 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.87 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.86 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.86 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.85 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.85 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.85 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.85 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.85 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.85 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.85 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.85 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.84 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.84 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.84 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.84 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.83 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.82 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.82 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.82 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.82 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.82 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.82 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.82 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.81 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.81 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.8 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.8 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.8 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.8 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.8 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.8 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.8 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.79 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.79 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.79 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.79 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.79 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.78 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.78 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.78 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.77 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.77 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.77 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.77 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.77 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.76 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.74 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.74 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.74 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.74 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.73 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.73 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.73 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.73 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.73 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.73 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.73 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.72 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.72 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.72 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.72 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.72 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.72 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.72 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.71 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.71 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.71 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.71 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.7 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.7 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.7 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.7 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.7 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.7 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.7 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.69 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.69 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.69 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.68 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.68 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.68 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.68 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.67 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.67 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.67 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.67 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.67 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.67 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.66 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.66 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.66 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.65 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.65 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.64 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.64 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.64 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.64 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.64 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.64 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.63 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.63 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.62 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.62 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.62 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.62 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.61 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.61 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.61 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.61 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.61 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.6 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.6 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.6 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.59 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.59 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.59 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.59 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.59 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.58 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.58 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.58 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.57 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.57 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.57 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.56 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.56 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.56 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.55 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.55 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.55 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.54 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.54 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.54 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.53 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.53 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.51 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.49 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.21 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.46 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.46 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.4 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 99.39 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.38 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.36 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.34 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.31 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.31 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 99.29 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 99.28 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.23 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.23 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.2 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.2 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.19 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 99.19 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.18 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.16 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.16 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 99.14 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.14 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.12 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 99.1 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.1 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 99.09 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 99.06 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 99.04 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.03 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.98 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.98 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.96 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.93 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.92 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.91 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 98.9 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 98.9 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.88 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.86 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 98.86 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 98.86 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.85 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.85 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.83 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 98.82 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.81 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.75 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.74 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.73 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 98.71 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.68 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.68 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.65 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.65 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.65 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.64 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.64 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.62 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.57 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.56 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 98.55 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 98.52 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.52 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 98.51 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.5 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 98.5 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 98.4 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 98.38 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 98.38 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.28 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.26 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 98.26 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.25 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.2 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.2 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.18 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.17 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 98.17 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.14 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.13 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.98 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 97.94 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 97.94 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.93 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 97.88 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.85 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.85 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 97.8 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 97.79 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 97.72 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.71 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.71 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 97.7 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 97.63 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.59 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.58 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.56 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 97.55 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 97.53 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 97.52 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 97.51 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 97.5 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 97.48 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 97.43 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.42 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 97.42 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 97.41 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 97.36 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.34 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 97.32 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 97.29 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 97.21 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 97.21 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.15 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 97.15 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.06 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 96.91 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 96.89 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.89 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 96.89 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 96.88 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 96.88 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 96.87 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 96.87 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 96.84 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.82 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 96.82 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 96.82 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.82 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 96.81 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 96.8 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.78 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 96.78 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.77 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 96.76 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 96.71 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 96.71 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 96.7 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.69 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 96.67 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.66 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.65 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 96.6 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 96.59 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 96.56 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 96.55 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 96.52 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 96.49 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 96.45 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 96.42 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 96.41 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 96.38 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.34 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 96.32 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.32 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 96.29 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 96.24 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 96.23 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.22 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 96.21 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 96.19 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.15 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 96.12 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 96.11 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 96.11 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 96.1 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 96.09 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 96.08 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 96.04 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.04 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.03 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 96.03 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.03 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 96.02 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 95.99 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 95.98 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 95.98 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 95.94 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.91 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 95.89 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 95.89 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 95.84 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 95.84 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 95.82 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 95.81 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 95.78 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 95.74 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 95.73 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 95.69 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 95.68 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 95.62 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 95.62 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 95.55 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 95.53 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 95.53 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 95.51 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 95.48 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.42 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 95.41 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 95.4 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 95.4 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 95.38 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 95.34 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 95.31 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 95.31 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 95.28 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 95.21 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 95.19 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 95.16 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 95.13 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 95.11 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 95.1 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 95.1 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 95.04 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 95.03 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 95.02 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 95.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 94.98 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 94.95 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 94.95 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 94.87 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 94.87 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 94.85 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 94.82 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 94.72 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 94.72 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 94.66 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 94.57 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 94.5 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 94.41 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 94.28 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 94.25 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 94.24 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 94.24 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 94.1 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 94.09 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 93.98 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 93.98 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 93.97 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 93.76 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 93.68 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 93.64 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 93.63 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 93.51 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 93.5 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 93.48 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 93.43 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 93.41 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 93.11 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 93.11 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 93.09 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 93.07 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 93.0 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 92.65 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 92.44 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 92.42 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 92.39 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 92.27 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 92.27 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 92.26 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 92.13 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 91.97 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 91.89 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 91.77 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 91.6 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 91.57 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 91.04 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 90.99 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 90.98 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 90.84 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 90.75 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 90.67 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 90.43 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 90.29 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 90.25 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 89.89 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 89.85 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 89.83 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 89.63 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 89.6 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 89.55 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 88.82 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 88.52 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 87.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 87.93 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 87.84 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 87.77 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 87.41 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 87.25 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 87.01 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 86.65 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 86.61 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 85.47 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 84.56 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 84.26 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 84.17 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 84.01 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 83.89 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 83.65 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 83.64 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 83.56 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 83.26 |
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-60 Score=512.44 Aligned_cols=490 Identities=44% Similarity=0.749 Sum_probs=400.6
Q ss_pred CCCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ce--eeeeccccc
Q 010654 2 DEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL--RVLTPRVVG 78 (505)
Q Consensus 2 ~~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~--~~l~~~~~~ 78 (505)
|+..|+.+||+|++++++.++++++++++..|..++.|||||++|++..++...++||++|++++. ++ +.++++..+
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~ 320 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG 320 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC
Confidence 345788899999999987778899987777788899999999999999887788999999999863 36 777766544
Q ss_pred eeEEee-eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE-EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 79 VDTAAS-HRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 79 ~~~~~s-~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+... ++|+.|+|.++.++..+.+|+++++++.+..+. ++++.++..+.++.++++.+++....++..+++++++..
T Consensus 321 ~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~ 400 (751)
T 2xe4_A 321 VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADS 400 (751)
T ss_dssp CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECCT
T ss_pred ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEeccc
Confidence 433333 349999999987535678999999875223333 678888878889999999999999999999999998621
Q ss_pred -----CCCc-ccccCCCceeeccCCeeeecCC--CC--cccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCC
Q 010654 157 -----VGEP-LKSLQGGKSVEFIDPVYSIDPS--ES--VFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGF 226 (505)
Q Consensus 157 -----~~~~-~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (505)
+++. . +.+.++...+.+ .+ +. +++++.++|+++++++|+++|.+++.+++.++.+.....+.+
T Consensus 401 ~~~~~~~g~~~------~~l~l~~~~~~~-~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~ 473 (751)
T 2xe4_A 401 QDGVFKAGTGL------REVVMEEPIFTV-HLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGF 473 (751)
T ss_dssp TTSCCCTTTCC------EECCCCCSSCEE-EECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTC
T ss_pred ccccccCCccc------eEECCCCceeEE-EeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCC
Confidence 1222 2 233444432221 12 11 457888999999999999999999988774433322221246
Q ss_pred CCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC
Q 010654 227 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL 306 (505)
Q Consensus 227 ~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 306 (505)
++..+.++.+++++.||.+|++++++|++. +.+++.|+||++|||++....+.|....+.|+++||+|+.+|+||+|++
T Consensus 474 ~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~-~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~ 552 (751)
T 2xe4_A 474 DAANYKVERRFATAPDQTKIPLSVVYHKDL-DMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSEL 552 (751)
T ss_dssp CGGGEEEEEEEEECTTCCEEEEEEEEETTS-CTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTT
T ss_pred CccceEEEEEEEECCCCcEEEEEEEcCCCC-CCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCc
Confidence 666778999999999999999999999986 5667899999999999888777888888899999999999999999999
Q ss_pred chhHHH-cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC
Q 010654 307 GRQWYE-NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 385 (505)
Q Consensus 307 g~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 385 (505)
|..|.. .+...++...++|+.+++++|++++++|++||+|+|+|+||++++++++++|++|+++|+.+|+.|+..++..
T Consensus 553 G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~ 632 (751)
T 2xe4_A 553 GRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCD 632 (751)
T ss_dssp CTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTC
T ss_pred CcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcc
Confidence 999998 8888888899999999999999999999999999999999999999999999999999999999999887655
Q ss_pred CCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEec
Q 010654 386 PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 465 (505)
Q Consensus 386 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~ 465 (505)
...++....|.++|.|.+++.++.+..+||+.++.++++||+||+||++|.+||+.++.+++++|++++++.+.+++...
T Consensus 633 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~ 712 (751)
T 2xe4_A 633 PSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNID 712 (751)
T ss_dssp TTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEE
T ss_pred cCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEEC
Confidence 55555555566788887787788888999999999999988999999999999999999999999999776665555433
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 466 LGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 466 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
+++||++........+..+.+++||.++|+..+.
T Consensus 713 ~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~~~ 746 (751)
T 2xe4_A 713 MESGHFSAKDRYKFWKESAIQQAFVCKHLKSTVR 746 (751)
T ss_dssp TTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred CCCCCCCcCChhHHHHHHHHHHHHHHHHhCCCch
Confidence 3889988766656677777899999999987654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-60 Score=510.06 Aligned_cols=473 Identities=28% Similarity=0.484 Sum_probs=388.8
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecC--CceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCC-ceeeeecccccee
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKD--DIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPE-ELRVLTPRVVGVD 80 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~--~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~-~~~~l~~~~~~~~ 80 (505)
.|+++||+|+++|++.++++|+++++ +.+..++.|||||++|++..... ..++||++|++++. ++++|+...+...
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 78999999999999888999998765 55778899999999999987654 45799999998874 4788887765555
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
+.|+++|++|+|.++.+ .++.+|+++++++.....| ++++..+ .+ .++++++.+++...+++..++++++++ |
T Consensus 285 ~~~~~~g~~l~~~t~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~--g 359 (693)
T 3iuj_A 285 SLVDNKGSTLYLLTNRD-APNRRLVTVDAANPGPAHWRDLIPERQQ-VL-TVHSGSGYLFAEYMVDATARVEQFDYE--G 359 (693)
T ss_dssp EEEEEETTEEEEEECTT-CTTCEEEEEETTSCCGGGCEEEECCCSS-CE-EEEEETTEEEEEEEETTEEEEEEECTT--S
T ss_pred EEEeccCCEEEEEECCC-CCCCEEEEEeCCCCCccccEEEecCCCC-EE-EEEEECCEEEEEEEECCeeEEEEEECC--C
Confidence 56999999999999874 4678999999987444344 4555444 46 889999999999999999999999876 4
Q ss_pred CcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEE
Q 010654 159 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWA 238 (505)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (505)
+.. +.+.+|.... +..++.+++++.++|.++++++|+++|.+++.+++.+. +......+++..+.++++++
T Consensus 360 ~~~------~~l~~p~~~~-~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~--l~~~~~~~~~~~~~~~~~~~ 430 (693)
T 3iuj_A 360 KRV------REVALPGLGS-VSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL--YRASAAPFKPEDYVSEQRFY 430 (693)
T ss_dssp CEE------EEECCSSSSE-EEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE--EECCCSSCCGGGEEEEEEEE
T ss_pred Cee------EEeecCCCce-EEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE--EEeCCCCcChhhCeeEEEEE
Confidence 322 2344444322 33355678899999999999999999999998887433 33332346666789999999
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
++.||.+|++++++|++. ..+++.|+||++|||++....+.|....+.|+++||+|+++|+||+|++|..|+..+....
T Consensus 431 ~~~dg~~i~~~l~~p~~~-~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 509 (693)
T 3iuj_A 431 QSKDGTRVPLIISYRKGL-KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQN 509 (693)
T ss_dssp ECTTSCEEEEEEEEESSC-CCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred ecCCCcEEEEEEEecCCC-CCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhc
Confidence 999999999999999987 6678899999999999988888898888899999999999999999999999999888888
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccccc
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 398 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 398 (505)
+...++|+.+++++|++++++|++||+|+|+|+||++++++++++|++|+++|+.+|+.|+..+.. .......+.++
T Consensus 510 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~~~~~~~~~ 586 (693)
T 3iuj_A 510 KQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT---FTAGTGWAYDY 586 (693)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG---SGGGGGCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc---CCCchhHHHHc
Confidence 888999999999999999999999999999999999999999999999999999999999876542 11111223568
Q ss_pred CCCCCHHH-HHHHHhCChhhcccC-CCCCeEEEEccCCCCCCCCChHHHHHHHHHhc---CCCCCeEEEEecCCCCCCCC
Q 010654 399 GDPWKEEF-YFYMKSYSPVDNVKA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREM---KTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 399 g~~~~~~~-~~~~~~~sp~~~~~~-~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~---~~~~~~~~~~~~~~~gH~~~ 473 (505)
|.|.+++. ++.+.++||+.++.+ +++||+||+||++|.+||+.++.+++++|+++ ++++++++++ ++||++.
T Consensus 587 g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~gH~~~ 663 (693)
T 3iuj_A 587 GTSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIET---NAGHGAG 663 (693)
T ss_dssp CCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC----------
T ss_pred CCccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeC---CCCCCCc
Confidence 88866555 788889999999999 89988999999999999999999999999998 4788888888 7899876
Q ss_pred CChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 474 SGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 474 ~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
.......+..+.+++||.++|+...
T Consensus 664 ~~~~~~~~~~~~~~~fl~~~l~~~~ 688 (693)
T 3iuj_A 664 TPVAKLIEQSADIYAFTLYEMGYRE 688 (693)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 5445667777889999999998764
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-58 Score=484.73 Aligned_cols=473 Identities=26% Similarity=0.376 Sum_probs=387.0
Q ss_pred CCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcE----EEEEec-cccceEEEEEeCCCCC-ceeeee-cc
Q 010654 3 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKF----LFIASE-SKITRFVFYLDVSKPE-ELRVLT-PR 75 (505)
Q Consensus 3 ~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~----i~~~~~-~~~~~~l~~~d~~~~~-~~~~l~-~~ 75 (505)
+..+|++||+|++||++.++++||++++.++.+++..++|+++ +++... +..++++|++|++... ++..|. +.
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 4578999999999999999999999988888888889999984 555544 4567999999987533 345543 33
Q ss_pred ccceeEEeeeeCCEEEEEEcCC------CCCCceEEEeeCCCC--C---CceE--EEcCCCCceeeEEEEeCCEEEEEEe
Q 010654 76 VVGVDTAASHRGNHFFITRRSD------ELFNSELLACPVDNT--S---ETTV--LIPHRESVKLQDIQLFIDHLAVYER 142 (505)
Q Consensus 76 ~~~~~~~~s~dg~~l~~~~~~~------~~~~~~l~~~~~~~~--~---~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~ 142 (505)
... . ....++++++.+..+ ..++++|++++++++ + ...| ++++..+..+.++.|+++.+++...
T Consensus 291 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 367 (711)
T 4hvt_A 291 DAT--L-QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATY 367 (711)
T ss_dssp TCE--E-EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEE
T ss_pred cce--E-eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEE
Confidence 211 1 334566888876543 236789999999763 1 2345 6889999999999999999999999
Q ss_pred cCCeeEEEEEEcCCCCC-cccccCCCce-eeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEe
Q 010654 143 EGGLQKITTYRLPAVGE-PLKSLQGGKS-VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIE 220 (505)
Q Consensus 143 ~~~~~~l~~~~~~~~~~-~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 220 (505)
+++..++.++++.. +. .. +. +.+|... .+...+.+++++.++++++++++|+++|.+++. ++. ..+.
T Consensus 368 ~~~~~~l~~~~~~~-g~~~~------~~~i~lp~~~-~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~--~~l~ 436 (711)
T 4hvt_A 368 DNVVAKVVTFTLEN-EQWTK------PVVLKLPYQN-AIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HEL--KIIR 436 (711)
T ss_dssp ETTEEEEEEECEET-TEECC------CEEECCCSTT-CEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCE--EEEE
T ss_pred ECCEEEEEEEECCC-CceEE------EeccCCCCCe-EEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcE--EEEe
Confidence 99999999998753 21 11 23 4555321 222233456788899999999999999999987 653 3333
Q ss_pred eecCCCCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhH-HHHHHCCcEEEEEc
Q 010654 221 TVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQ 299 (505)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~d 299 (505)
.....+++..+.++++++++.||.+|++++++|++. ++++++|+||++|||++....+.|.... +.|+++||+|+.+|
T Consensus 437 ~~~~~~~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~-~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d 515 (711)
T 4hvt_A 437 KALYSFDSENYVLEQKEATSFDGVKIPYFLVYKKGI-KFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLAN 515 (711)
T ss_dssp CCSSCCCGGGEEEEEEEEECTTSCEEEEEEEEETTC-CCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEEC
T ss_pred cCCcccCcccCeeEEEEEECCCCeEEEEEEEecCCC-CCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEe
Confidence 444456666778999999999999999999999987 6678899999999999988888888766 58999999999999
Q ss_pred ccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh
Q 010654 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 379 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~ 379 (505)
+||+|++|..|+..+...++...++|+.++++||++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+
T Consensus 516 ~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~ 595 (711)
T 4hvt_A 516 IRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDM 595 (711)
T ss_dssp CTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT
T ss_pred CCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccch
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCCC-CeEEEEccCCCCCCCCChHHHHHHHH-HhcCCC
Q 010654 380 LTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNY-PHILVTAGLNDPRVMYSEPAKFVAKL-REMKTD 456 (505)
Q Consensus 380 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~-Pp~Li~~G~~D~~vp~~~~~~~~~~L-~~~~~~ 456 (505)
..+... . ....| .+||.|.+++.++.+.++||+.++++++. ||+||+||++|.+||+.++.+++++| +++|++
T Consensus 596 ~~~~~~---~-~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~p 671 (711)
T 4hvt_A 596 IRYKEF---G-AGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTK 671 (711)
T ss_dssp TTGGGS---T-TGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCC
T ss_pred hhhhcc---c-cchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCC
Confidence 765421 1 12234 66899988888888899999999999865 67999999999999999999999999 999999
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+++++|+ ++||++...........+.+++||.++|+..
T Consensus 672 v~l~~~p---~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~~ 709 (711)
T 4hvt_A 672 TYFLESK---DSGHGSGSDLKESANYFINLYTFFANALKLK 709 (711)
T ss_dssp EEEEEES---SCCSSSCSSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEC---CCCCcCcCCcchHHHHHHHHHHHHHHHhCCc
Confidence 9999998 8899986666666777778999999999864
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-57 Score=487.98 Aligned_cols=475 Identities=28% Similarity=0.428 Sum_probs=389.9
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEeccc-c-ceEEEEEeCCC------CC-ceeeeec
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESK-I-TRFVFYLDVSK------PE-ELRVLTP 74 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~~~~-~-~~~l~~~d~~~------~~-~~~~l~~ 74 (505)
+++.+||+|++++++.++++++++.+ +.+..++.|||||++|++.+... + .++||++|+++ +. +++.|+.
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 77899999999998777788888654 55777899999999999987644 2 68999999987 53 3777877
Q ss_pred cccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEe-CCEEEEEEecCCeeEEEE
Q 010654 75 RVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLF-IDHLAVYEREGGLQKITT 151 (505)
Q Consensus 75 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~-~d~l~~~~~~~~~~~l~~ 151 (505)
......+.|+|||++|+|.++.+ .++.+|+++++++.....| ++++.....+.++.|+ ++.+++....++..++++
T Consensus 285 ~~~~~~~~~s~dg~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 285 NFEGEYDYVTNEGTVFTFKTNRH-SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp SSSSCEEEEEEETTEEEEEECTT-CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CCCcEEEEEeccCCEEEEEECCC-CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 66555566999999999999863 4678999999987332233 5665554568889999 678999999999999999
Q ss_pred EEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc--EEEEEEeeecCCCCCC
Q 010654 152 YRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI--SVLKKIETVLGGFDTN 229 (505)
Q Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (505)
+++.. |...+ .+.++.. .+..++++++++.++|+++++++|+++|++++.+++ .++.+.... ..++..
T Consensus 364 ~~~~~-g~~~~------~l~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~-~~~~~~ 433 (710)
T 2xdw_A 364 HDLAT-GALLK------IFPLEVG--SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTV-KGIDAS 433 (710)
T ss_dssp EETTT-CCEEE------EECCCSS--EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCC-TTCCGG
T ss_pred EECCC-CCEEE------ecCCCCc--eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeeccc-CCcCcc
Confidence 98743 33222 2333321 233345567888999999999999999999998876 444433222 246666
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCch
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~ 308 (505)
.+..+++++++.||.+|++++++|++. ...++.|+||++|||++....+.|....+.|++ +||+|+++|+||+|++|.
T Consensus 434 ~~~~~~~~~~~~dg~~i~~~~~~p~~~-~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~ 512 (710)
T 2xdw_A 434 DYQTVQIFYPSKDGTKIPMFIVHKKGI-KLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGE 512 (710)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTC-CCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHH
T ss_pred ccEEEEEEEEcCCCCEEEEEEEecCCC-CCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCCh
Confidence 788999999999999999999999986 566789999999999988888888877778888 999999999999999999
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCC
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
.|+..+...++...++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.|+..++.. .
T Consensus 513 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-~- 590 (710)
T 2xdw_A 513 TWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY-T- 590 (710)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS-T-
T ss_pred HHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc-C-
Confidence 99988887888889999999999999999999999999999999999999999999999999999999998765432 1
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhccc-----CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc-------CCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVK-----AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM-------KTD 456 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~-----~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~-------~~~ 456 (505)
.....+.++|.|.+++.++.+..+||+.++. ++++||+||+||++|.+||+.++.+++++|+.+ +.+
T Consensus 591 -~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 669 (710)
T 2xdw_A 591 -IGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNP 669 (710)
T ss_dssp -TGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSC
T ss_pred -CChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcC
Confidence 1111225678887778788888999999999 789877999999999999999999999999998 889
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+++++++ ++||++........+..+.+++||.++|+..
T Consensus 670 ~~~~~~~---~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 707 (710)
T 2xdw_A 670 LLIHVDT---KAGHGAGKPTAKVIEEVSDMFAFIARCLNID 707 (710)
T ss_dssp EEEEEES---SCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEeC---CCCcCCCCCHHHHHHHHHHHHHHHHHHcCCc
Confidence 8888888 8899886655555667778999999999865
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-57 Score=483.46 Aligned_cols=475 Identities=27% Similarity=0.435 Sum_probs=388.7
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCC-ceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeeccccceeEE
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVDTA 82 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~-~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 82 (505)
.++.+||+|+++|++.++++++++++. .+..++.|||||++|++.+... ..++||+++..++. ++.|+.......+.
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEV 277 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEE
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEE
Confidence 678999999999987778889987554 4777899999999999988766 67899999887775 88888766555555
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
+++||+ |++.++. +.++.+|+++++++.....| ++.+..+..+.++.++++.+++....++..++++++++ |+.
T Consensus 278 ~~~~g~-l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~--g~~ 353 (695)
T 2bkl_A 278 HAWKDR-FYVLTDE-GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK--GKP 353 (695)
T ss_dssp EEETTE-EEEEECT-TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT--CCE
T ss_pred EecCCc-EEEEECC-CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC--CCe
Confidence 668999 9998876 34568999999976333223 66666566788899999999999999999999998865 432
Q ss_pred ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEEC
Q 010654 161 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASA 240 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 240 (505)
. +.+.++... .+..++++++++.++|+++++++|+++|++++.+++.++.+ .....+++..+..+.+++++
T Consensus 354 ~------~~l~~~~~~-~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~--~~~~~~~~~~~~~~~~~~~~ 424 (695)
T 2bkl_A 354 V------RTVQLPGVG-AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA--KVDVPMNPEQYQVEQVFYAS 424 (695)
T ss_dssp E------EECCCSSSS-EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE--ECCCSSCGGGEEEEEEEEEC
T ss_pred e------EEecCCCCe-EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe--cCCCCCCHHHCeEEEEEEEC
Confidence 2 223343222 23446677889999999999999999999999888744433 22223566677899999999
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.||.+|++++++|++. ...++.|+||++|||++....+.|....+.|+++||+|+++|+||+|++|..|+..+...++.
T Consensus 425 ~dg~~i~~~~~~p~~~-~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~ 503 (695)
T 2bkl_A 425 KDGTKVPMFVVHRKDL-KRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQ 503 (695)
T ss_dssp TTSCEEEEEEEEETTC-CCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTH
T ss_pred CCCCEEEEEEEECCCC-CCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCC
Confidence 9999999999999986 566789999999999988887788888888999999999999999999999999888777888
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
..++|+.+++++|++++++|++||+|+|+|+||++++++++++|++|+++|+.+|+.|+..+. ..+.....+.++|.
T Consensus 504 ~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---~~~~~~~~~~~~g~ 580 (695)
T 2bkl_A 504 NVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---LFGSGRTWIPEYGT 580 (695)
T ss_dssp HHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---GSTTGGGGHHHHCC
T ss_pred CcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc---ccCCCcchHHHhCC
Confidence 899999999999999999999999999999999999999999999999999999999987543 22222233366788
Q ss_pred CCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHh---cCCCCCeEEEEecCCCCCCCCCCh
Q 010654 401 PWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLRE---MKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 401 ~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
|.+++.++.+..+||+.++++++ .||+||+||++|.+||+.++.+++++|++ .+.++++++++ ++||++....
T Consensus 581 ~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~gH~~~~~~ 657 (695)
T 2bkl_A 581 AEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEA---NAGHGGADQV 657 (695)
T ss_dssp TTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEET---TCBTTBCSCH
T ss_pred CCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeC---CCCcCCCCCH
Confidence 88888888889999999999875 36799999999999999999999999998 67888888887 8899875545
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCC
Q 010654 477 FERLREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~~~~~~ 500 (505)
....+..+.+++||.++|+..+.+
T Consensus 658 ~~~~~~~~~~~~fl~~~l~~~~~~ 681 (695)
T 2bkl_A 658 AKAIESSVDLYSFLFQVLDVQGAQ 681 (695)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCC
Confidence 556667778999999999876543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-57 Score=486.23 Aligned_cols=473 Identities=28% Similarity=0.418 Sum_probs=380.8
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCC-ceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-c-eeeeeccccce
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE-E-LRVLTPRVVGV 79 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~-~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-~-~~~l~~~~~~~ 79 (505)
.++.+||+|+++|++.++++++++++. .+..++.|||||++|++.+... ..++||++|++++. + ++.|+......
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 468899999999987778889987653 4678899999999999988654 47899999998874 4 67777666555
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
.+.++|||++|+|.++. +.++.+|++++++++. ..| +++.. +..+.++.|+++.+++....++..++++++++
T Consensus 320 ~~~~~~dg~~l~~~s~~-~~~~~~l~~~d~~~~~-~~~~~l~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-- 394 (741)
T 1yr2_A 320 WDFVDGVGDQLWFVSGD-GAPLKKIVRVDLSGST-PRFDTVVPES-KDNLESVGIAGNRLFASYIHDAKSQVLAFDLD-- 394 (741)
T ss_dssp EEEEEEETTEEEEEECT-TCTTCEEEEEECSSSS-CEEEEEECCC-SSEEEEEEEEBTEEEEEEEETTEEEEEEEETT--
T ss_pred EEEEeccCCEEEEEECC-CCCCCEEEEEeCCCCc-cccEEEecCC-CCeEEEEEEECCEEEEEEEECCEEEEEEEeCC--
Confidence 56688999999999987 4567899999987632 234 55544 44578899999999999999999999998864
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKW 237 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (505)
|+.. +.+.+|.... +..++++++++.++|+++++++|+++|++++.+++.++ +......+++..+..++++
T Consensus 395 g~~~------~~l~~~~~~~-v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~--l~~~~~~~~~~~~~~~~~~ 465 (741)
T 1yr2_A 395 GKPA------GAVSLPGIGS-ASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTP--WEPVHLTFDPADFRVEQVF 465 (741)
T ss_dssp SCEE------EECBCSSSCE-EEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEE--CSCCCCSSCGGGEEEEEEE
T ss_pred CCce------eeccCCCCeE-EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE--EecCCCCCChhHCEEEEEE
Confidence 4322 2233433222 23345678889999999999999999999998887333 2222224566677899999
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+++.||.+|++++++|++. .++.|+||++|||++....+.|....+.|+++||+|+++|+||+|++|..|...+...
T Consensus 466 ~~~~dg~~i~~~~~~p~~~---~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 542 (741)
T 1yr2_A 466 YPSKDGTKVPMFIVRRKDA---KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRD 542 (741)
T ss_dssp EECTTSCEEEEEEEEETTC---CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEcCCCCEEEEEEEecCCC---CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhh
Confidence 9999999999999999874 3678999999999988887888888889999999999999999999999999887777
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccc
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 397 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 397 (505)
++...++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.|+..+. ..+.....+.+
T Consensus 543 ~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---~~~~~~~~~~~ 619 (741)
T 1yr2_A 543 KKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD---QFTAGRYWVDD 619 (741)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG---GSTTGGGGHHH
T ss_pred cCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccccccc---CCCCCchhHHH
Confidence 778889999999999999999999999999999999999999999999999999999999987643 22222223366
Q ss_pred cCCCCCHHHHHHHHhCChhhcccC-CCCCeEEEEccCCCCCCCCChHHHHHHHHHh---cCCCCCeEEEEecCCCCCCCC
Q 010654 398 WGDPWKEEFYFYMKSYSPVDNVKA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLRE---MKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 398 ~g~~~~~~~~~~~~~~sp~~~~~~-~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~gH~~~ 473 (505)
+|.|.+++.++.+..+||+.++++ +++||+||+||++|.+||+.++.+++++|+. .|+++++++++ ++||++.
T Consensus 620 ~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~---~~gH~~~ 696 (741)
T 1yr2_A 620 YGYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIET---RAGHGSG 696 (741)
T ss_dssp HCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC-----------
T ss_pred cCCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeC---CCCcCCC
Confidence 788877888888999999999998 8887799999999999999999999999999 88898888888 7899876
Q ss_pred CChHHHHHHHHHHHHHHHHhhCCCCCC
Q 010654 474 SGRFERLREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 474 ~~~~~~~~~~~~~~~fl~~~l~~~~~~ 500 (505)
.......+..+.+++||.++|+..+.+
T Consensus 697 ~~~~~~~~~~~~~~~fl~~~l~~~~~~ 723 (741)
T 1yr2_A 697 KPIDKQIEETADVQAFLAHFTGLTPRP 723 (741)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 555555667778999999999877654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=399.55 Aligned_cols=465 Identities=16% Similarity=0.114 Sum_probs=343.5
Q ss_pred CCCceEEEEECCCCC----CCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-----cceEEEEEeCC-CCC--ceeee
Q 010654 5 LRPDKAWLHKLEADQ----SNDICLYHEKDDIYSLGLQASESKKFLFIASESK-----ITRFVFYLDVS-KPE--ELRVL 72 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~----~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-----~~~~l~~~d~~-~~~--~~~~l 72 (505)
.+..+||+|++.++. .+.+.+.+ ....+...++|||||++|++..+.. ..++||++|++ ++. +.+.+
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSAVRELSD-DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGGSEESSC-SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred CceeEEEEEECCCCccccCCceeEEEe-cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 344689999997621 23444541 2244666889999999999987654 35799999999 562 26666
Q ss_pred eccccc-ee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCc-------eeeEEEEeC-CEEEEEEe
Q 010654 73 TPRVVG-VD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV-------KLQDIQLFI-DHLAVYER 142 (505)
Q Consensus 73 ~~~~~~-~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~i~~~~~~~-d~l~~~~~ 142 (505)
+....+ .. ..|||||+ ++|.++.++ ..+|+++++++ +....++....+. .+..+.+++ +.+++...
T Consensus 237 ~~~~~~~~~~~~~spdg~-l~~~~~~~~--~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGS-LIVATDRTG--WWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EEETTBCEEEEEECTTSC-EEEEECTTS--SCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred CCCCCceEcceEECCCCe-EEEEECCCC--CeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 654222 22 34999999 888887643 35899999865 3333122221111 134566664 57777777
Q ss_pred cCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeee
Q 010654 143 EGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETV 222 (505)
Q Consensus 143 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 222 (505)
. +..+++.++++ ++.++.|+ .+.. .+..+ ++++++.+++..++...|.++|++++.+++. ..++..
T Consensus 313 ~-~~~~l~~~d~~--~~~~~~l~------~~~~--~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~l~~~ 378 (662)
T 3azo_A 313 K-GAAVLGILDPE--SGELVDAA------GPWT--EWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRA--RTIGAR 378 (662)
T ss_dssp S-SSCEEEEEETT--TTEEEECC------SSCC--EEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCE--EEEESC
T ss_pred c-CccEEEEEECC--CCcEEEec------CCCC--eEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCce--EEeecC
Confidence 7 77788877765 33333332 1111 12211 1577889999999999999999999988873 333322
Q ss_pred c-CCCCCCCc-eEEEEEEECCCCceeeEEEEEeCCccC----CCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEE
Q 010654 223 L-GGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVK----LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFA 296 (505)
Q Consensus 223 ~-~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~~----~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~ 296 (505)
. ..+....+ ..+.+.+++.||..|+++++.|++. + +++++|+||++||+++......|....+.|+++||+|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~-~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~ 457 (662)
T 3azo_A 379 HTDPVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSP-DFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVA 457 (662)
T ss_dssp CCCSSCGGGSCCCEEEEEECTTSCEEEEEEECCCCS-SEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEE
T ss_pred CcccCCccccCcceEEEEEcCCCCEEEEEEECCCCc-cccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEE
Confidence 2 23333334 5788999999999999999999875 3 45678999999999987776778888899999999999
Q ss_pred EEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 297 IAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 297 ~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.+|+||++++|..|.......++...++|+.++++++++++.+|++||+|+|+|+||+++++++.+ |++|+++|+.+|+
T Consensus 458 ~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~ 536 (662)
T 3azo_A 458 DVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPV 536 (662)
T ss_dssp EEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCC
T ss_pred EECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCc
Confidence 999999999999998776667777889999999999999999999999999999999999999886 9999999999999
Q ss_pred hhhhhhccCCCCCCCcccc--cccCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 377 VDVLTTMLDPTIPLTTAEW--EEWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 377 ~d~~~~~~~~~~~~~~~~~--~~~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
.|+........... ...+ ..++.+ .+.+ .+...+|+.++.++++| +|++||++|.+||+.++++++++|+++
T Consensus 537 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~sp~~~~~~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~ 611 (662)
T 3azo_A 537 LDLLGWADGGTHDF-ESRYLDFLIGSFEEFPE---RYRDRAPLTRADRVRVP-FLLLQGLEDPVCPPEQCDRFLEAVAGC 611 (662)
T ss_dssp CCHHHHHTTCSCGG-GTTHHHHHTCCTTTCHH---HHHHTCGGGGGGGCCSC-EEEEEETTCSSSCTHHHHHHHHHHTTS
T ss_pred cCHHHHhcccccch-hhHhHHHHhCCCccchh---HHHhhChHhHhccCCCC-EEEEeeCCCCCCCHHHHHHHHHHHHHc
Confidence 99876543111111 1112 123443 3443 34678999999999998 999999999999999999999999999
Q ss_pred CCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 454 KTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 454 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
|+++++++|+ ++||++.. .....+....+++||.++|+..++
T Consensus 612 g~~~~~~~~~---~~gH~~~~-~~~~~~~~~~~~~fl~~~l~~~~~ 653 (662)
T 3azo_A 612 GVPHAYLSFE---GEGHGFRR-KETMVRALEAELSLYAQVFGVEVA 653 (662)
T ss_dssp CCCEEEEEET---TCCSSCCS-HHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEC---CCCCCCCC-hHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999998 88998643 223345566789999999987654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=392.36 Aligned_cols=466 Identities=15% Similarity=0.109 Sum_probs=329.5
Q ss_pred eEEEEECCC---CCC-CCeEEEEe----cCCceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCC------ceeeee
Q 010654 9 KAWLHKLEA---DQS-NDICLYHE----KDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPE------ELRVLT 73 (505)
Q Consensus 9 ~l~~~~lgt---~~~-~~~~~~~~----~~~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~------~~~~l~ 73 (505)
+|++|++.+ +.. +...+... ....+...++|||||+.+++..++. ....|+++|+++++ ..+.+.
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 699999977 521 12222211 1344566899999999877776654 45689999998874 122231
Q ss_pred -ccccc-e------eEEeeeeCCEEE-EEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEec-
Q 010654 74 -PRVVG-V------DTAASHRGNHFF-ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYERE- 143 (505)
Q Consensus 74 -~~~~~-~------~~~~s~dg~~l~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~- 143 (505)
....+ . ...|||||+.|+ +.+++++ ..+||++++++ +..+ .++........-+.++++.++|..+.
T Consensus 309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G--~~~l~~~~~~~-~~~~-~lT~g~~~v~~~~~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG--YRHICYFQIDK-KDCT-FITKGTWEVIGIEALTSDYLYYISNEY 384 (740)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS--CEEEEEEETTC-SSCE-ESCCSSSCEEEEEEECSSEEEEEESCG
T ss_pred eccCCceEccCcCCCceEcCCCCEEEEEEEcCCC--ceEEEEEECCC-CceE-ecccCCEEEEEEEEEeCCEEEEEEecC
Confidence 11111 1 234999999998 6665543 46999999986 5555 55654333333344677789998876
Q ss_pred -C--CeeEEEEEEcCCCCCcc-cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE-EEEE
Q 010654 144 -G--GLQKITTYRLPAVGEPL-KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS-VLKK 218 (505)
Q Consensus 144 -~--~~~~l~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~ 218 (505)
+ +..+|+.++++ +... ++|++.. .-..+. ...++++++++.+++.++++. |+.+++++..+++. ++..
T Consensus 385 ~~~~~~~~ly~v~~~--g~~~~~~lt~~~--~~~~~~--~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLI--DYTKVTCLSCEL--NPERCQ--YYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp GGCTTCBEEEEEETT--EEEEEEESSTTT--STTTBC--BEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEE
T ss_pred CCCCceeEEEEEECC--CCCcceeecccc--CCCCCc--eEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEec
Confidence 3 44456555554 4322 2444210 000111 122467889999999999988 88999999877653 2222
Q ss_pred Eeee-cCCCCCCCc-eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCCc-hhHHHHH-HCCc
Q 010654 219 IETV-LGGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAFN-SSRLSLL-DRGF 293 (505)
Q Consensus 219 ~~~~-~~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~~-~~~~~l~-~~G~ 293 (505)
.+.. ...+....+ ..+.+.+ +.||..++++++.|+++ ++.+++|+||++|||++.+. ...|. .....|+ ++||
T Consensus 458 ~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~-~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~ 535 (740)
T 4a5s_A 458 DNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHF-DKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535 (740)
T ss_dssp CCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTC-CTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCC
T ss_pred cChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCC-CCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCe
Confidence 1111 111222233 4566677 78999999999999987 66788999999999987743 23333 2234555 5899
Q ss_pred EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 294 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 294 ~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
+|+.+|+||+|++|..|.......++...++|+.+++++|++++.+|++||+|+|+||||++++.++.++|++|+++++.
T Consensus 536 ~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~ 615 (740)
T 4a5s_A 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAV 615 (740)
T ss_dssp EEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEE
T ss_pred EEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEc
Confidence 99999999999999999888778888889999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhccCCCCCCCcccc-c-ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 374 VPFVDVLTTMLDPTIPLTTAEW-E-EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 374 ~~~~d~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
+|+.|+..+. ..| . .++.|...+..+.+...+|+.++.+++.||+||+||+.|.+||+.++++++++|+
T Consensus 616 ~p~~~~~~~~---------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~ 686 (740)
T 4a5s_A 616 APVSRWEYYD---------SVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALV 686 (740)
T ss_dssp SCCCCGGGSB---------HHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHH
T ss_pred CCccchHHhh---------hHHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHH
Confidence 9999875321 112 1 1354411112233467899999999987559999999999999999999999999
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCCC
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 500 (505)
++++++++++|+ +++|++.. ..........+.+||.++|+..+++
T Consensus 687 ~~g~~~~~~~~~---~~~H~~~~-~~~~~~~~~~i~~fl~~~l~~~~~~ 731 (740)
T 4a5s_A 687 DVGVDFQAMWYT---DEDHGIAS-STAHQHIYTHMSHFIKQCFSLPAAA 731 (740)
T ss_dssp HTTCCCEEEEET---TCCTTCCS-HHHHHHHHHHHHHHHHHHTTCC---
T ss_pred HCCCCeEEEEEC---CCCCcCCC-CccHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999998 88998732 2233444567899999999865433
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=377.15 Aligned_cols=432 Identities=18% Similarity=0.169 Sum_probs=323.7
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
.+++|++.++ +.+.+...+. .++.|||||++|++..... ....||++|+++++ .+.|+....... ..||||
T Consensus 133 ~~~l~d~~~g--~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~~~~~~~~~SpD 205 (582)
T 3o4h_A 133 RVALYALDGG--GLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-LRVFDSGEGSFSSASISPG 205 (582)
T ss_dssp CEEEEEEETT--EEEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-CEEECCSSCEEEEEEECTT
T ss_pred CceEEEccCC--cEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-ceEeecCCCccccceECCC
Confidence 3457788664 3445554432 5678999999999876653 33679999999997 888876543332 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE--------EeCC-EEEEEEecCCeeEEEEEEcCCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ--------LFID-HLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~d-~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
|+.|+ .++.++ ..+|+++|+++ +... +++. .+..+..+. |++| .+++....++. +.+|.+
T Consensus 206 G~~l~-~~~~~~--~~~i~~~d~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~--~~l~~~--- 274 (582)
T 3o4h_A 206 MKVTA-GLETAR--EARLVTVDPRD-GSVE-DLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARREGR--SAVFID--- 274 (582)
T ss_dssp SCEEE-EEECSS--CEEEEEECTTT-CCEE-ECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE--EEEEET---
T ss_pred CCEEE-EccCCC--eeEEEEEcCCC-CcEE-EccC-CCcChhhhhhccccceeEcCCCcEEEEEEcCCc--EEEEEE---
Confidence 99999 443322 35899999986 5444 4443 232344444 8887 56677777775 455665
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCC----CCceE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDT----NNYFT 233 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 233 (505)
|.... .+.. .+..++++ ++.++++.++..+|+++|+++..+ + +.++ .+.+ .....
T Consensus 275 g~~~~---------~~~~--~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~~~-~--~~~l-----~~~~~~~~~~~~~ 333 (582)
T 3o4h_A 275 GERVE---------APQG--NHGRVVLW--RGKLVTSHTSLSTPPRIVSLPSGE-P--LLEG-----GLPEDLRRSIAGS 333 (582)
T ss_dssp TEEEC---------CCSS--EEEEEEEE--TTEEEEEEEETTEEEEEEEETTCC-E--EECC-----CCCHHHHHTEEEE
T ss_pred CCeec---------cCCC--ceEEEEec--CCEEEEEEcCCCCCCeEEEEcCCC-c--eEEE-----ecCCccccccCcc
Confidence 32111 1111 12223445 456778999999999999998764 3 3222 2222 23377
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
+.+++++.||.+++++++.|++. . .+.|+||++||+++......|....+.|+++||+|+.+|+||++++|..|...
T Consensus 334 ~~~~~~~~~g~~i~~~~~~p~~~-~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~ 410 (582)
T 3o4h_A 334 RLVWVESFDGSRVPTYVLESGRA-P--TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 410 (582)
T ss_dssp EEEEEECTTSCEEEEEEEEETTS-C--SSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred eEEEEECCCCCEEEEEEEcCCCC-C--CCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhh
Confidence 99999999999999999999876 3 37899999999988766777888889999999999999999999999999887
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcc
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTA 393 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~ 393 (505)
....++...++|+.++++++.+++.+| ||+|+|+|+||++++.++.++|++|+++|+.+|+.++...+...... ..
T Consensus 411 ~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~--~~ 486 (582)
T 3o4h_A 411 IIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAA--FR 486 (582)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHH--HH
T ss_pred hhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccch--hH
Confidence 777888889999999999999998887 99999999999999999999999999999999999987654321110 00
Q ss_pred ccc--ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 394 EWE--EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 394 ~~~--~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
.+. .++ .+++ .+...+|+.++.++++| +|++||++|.+||+.++++++++|+++|+++++++|+ ++||.
T Consensus 487 ~~~~~~~~--~~~~---~~~~~sp~~~~~~i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~---~~gH~ 557 (582)
T 3o4h_A 487 NFIEQLTG--GSRE---IMRSRSPINHVDRIKEP-LALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIP---DAGHA 557 (582)
T ss_dssp HHHHHHTT--TCHH---HHHHTCGGGGGGGCCSC-EEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEET---TCCSS
T ss_pred HHHHHHcC--cCHH---HHHhcCHHHHHhcCCCC-EEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEEC---CCCCC
Confidence 121 123 3333 34778999999999987 9999999999999999999999999999999999998 88998
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 472 SKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 472 ~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+.. .....+....+.+||.++|+.
T Consensus 558 ~~~-~~~~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 558 INT-MEDAVKILLPAVFFLATQRER 581 (582)
T ss_dssp CCB-HHHHHHHHHHHHHHHHHHHTC
T ss_pred CCC-hHHHHHHHHHHHHHHHHHcCC
Confidence 752 233344566789999999863
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=363.88 Aligned_cols=447 Identities=14% Similarity=0.161 Sum_probs=323.8
Q ss_pred CceEEEEECCCCCCCCeEEEEe-cCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccc-----
Q 010654 7 PDKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVG----- 78 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~----- 78 (505)
..+|++|++.++. .+.+... ....+...+.|||||++|++..... ....|+++|+++++..+.+......
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTE--EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCc--eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 3679999997652 3333322 1233556889999999998876443 3568999999998325555432211
Q ss_pred -eeEEeee--eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeE-EEEeCC--EEEEEEecCC--eeEEE
Q 010654 79 -VDTAASH--RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD-IQLFID--HLAVYEREGG--LQKIT 150 (505)
Q Consensus 79 -~~~~~s~--dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~d--~l~~~~~~~~--~~~l~ 150 (505)
....||| ||+ +++.++.++ ..+|+.++..+ +..+ .++.... .+.. +.|++| .+++....++ ..+++
T Consensus 312 ~~~~~~sp~~dg~-~l~~~~~~g--~~~l~~~~~~~-~~~~-~l~~~~~-~v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 312 LHPLTFLPGSNNQ-FIWQSRRDG--WNHLYLYDTTG-RLIR-QVTKGEW-EVTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp CSCCEECTTCSSE-EEEEECTTS--SCEEEEEETTS-CEEE-ECCCSSS-CEEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred cCCceeecCCCCE-EEEEEccCC--ccEEEEEECCC-CEEE-ecCCCCe-EEEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 1235999 997 445555433 36899999654 3333 4444333 2333 678775 5777766655 34677
Q ss_pred EEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCC
Q 010654 151 TYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNN 230 (505)
Q Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (505)
.+++. ++..++|+.. .. +..+.+++|++.+++.+++...|++++++++.+++. ..++... .+....
T Consensus 386 ~~d~~--~~~~~~l~~~------~~---~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~--~~~~~~~-~~~~~~ 451 (706)
T 2z3z_A 386 CIDIK--GGKTKDLTPE------SG---MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH--TLLEAKN-PDTGYA 451 (706)
T ss_dssp EEETT--CCCCEESCCS------SS---EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE--EEEECC-------C
T ss_pred EEEcC--CCCceeccCC------Cc---eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE--eeccccc-hhhhcC
Confidence 77665 3333333211 11 223467899999999999999999999999987762 2222221 222222
Q ss_pred c-eEEEEEEECCCC-ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCch----hHHHHHHCCcEEEEEcccCC
Q 010654 231 Y-FTERKWASASDG-TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNS----SRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 231 ~-~~~~~~~~s~dG-~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~----~~~~l~~~G~~v~~~d~rG~ 303 (505)
+ ..+.+.+++.|| ..++++++.|+++ ++++++|+||++|||++.... ..|.. ..+.|+++||+|+.+|+||+
T Consensus 452 ~~~~~~~~~~~~~g~~~~~~~~~~P~~~-~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~ 530 (706)
T 2z3z_A 452 MPEIRTGTIMAADGQTPLYYKLTMPLHF-DPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGS 530 (706)
T ss_dssp CCCEEEEEEECTTSSSEEEEEEECCTTC-CTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTC
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEeCCCC-CCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCC
Confidence 3 578889999999 8999999999886 566788999999999876532 33543 46789999999999999999
Q ss_pred CCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 304 GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
|+++..+.......++...++|+.+++++|.+++.+|++|++|+|+|+||++++.++.++|++|+++|+.+|+.++..+.
T Consensus 531 g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 610 (706)
T 2z3z_A 531 ANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYA 610 (706)
T ss_dssp SSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSB
T ss_pred cccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHH
Confidence 99999888766667777889999999999999988999999999999999999999999999999999999998864321
Q ss_pred cCCCCCCCcccc-c-ccCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 384 LDPTIPLTTAEW-E-EWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 384 ~~~~~~~~~~~~-~-~~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
..+ . .++.| .+++.+ ...+|...+.++++| +|++||++|.+||++++++++++|+.++++++++
T Consensus 611 ---------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 677 (706)
T 2z3z_A 611 ---------IMYGERYFDAPQENPEGY---DAANLLKRAGDLKGR-LMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYY 677 (706)
T ss_dssp ---------HHHHHHHHCCTTTCHHHH---HHHCGGGGGGGCCSE-EEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEE
T ss_pred ---------hhhhhhhcCCcccChhhh---hhCCHhHhHHhCCCC-EEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 112 1 12555 344443 556899999999987 9999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+|+ ++||.+... ........+.+||.++|
T Consensus 678 ~~~---~~gH~~~~~--~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 678 VYP---SHEHNVMGP--DRVHLYETITRYFTDHL 706 (706)
T ss_dssp EET---TCCSSCCTT--HHHHHHHHHHHHHHHHC
T ss_pred EeC---CCCCCCCcc--cHHHHHHHHHHHHHHhC
Confidence 998 889987544 23334556899999875
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=365.34 Aligned_cols=446 Identities=14% Similarity=0.173 Sum_probs=326.6
Q ss_pred eEEEEECCC-CCCCCeEEEEe-cCCceEEEEEEeCCCcEEEEEecc--ccceEEEEEeCCCCCceeeeeccccc------
Q 010654 9 KAWLHKLEA-DQSNDICLYHE-KDDIYSLGLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVG------ 78 (505)
Q Consensus 9 ~l~~~~lgt-~~~~~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~~~~~~------ 78 (505)
+||+|++.+ +. .+.+... ....+...+.| |||++|++.... .....|+++|+++++ .+.+......
T Consensus 264 ~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 264 KLGVISPAEQAQ--TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-QRVLAHETSPTWVPLH 339 (741)
T ss_dssp EEEEECSSTTCC--CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC-EEEEEEEECSSCCCCC
T ss_pred EEEEEECCCCCc--eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc-eEEEEEcCCCCcCCcC
Confidence 899999976 53 3333322 12345568899 999999988653 246789999999987 6665543321
Q ss_pred eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEE-EEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 79 VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDI-QLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 79 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
....|||||+ +++.++.++ ..+|+.+++.+ + .. .++.... .+..+ .|++| .+++....++...+.+|+++
T Consensus 340 ~~~~~spdg~-~~~~~~~~g--~~~l~~~~~~~-~-~~-~l~~~~~-~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 340 NSLRFLDDGS-ILWSSERTG--FQHLYRIDSKG-K-AA-ALTHGNW-SVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp SCCEECTTSC-EEEEECTTS--SCEEEEECSSS-C-EE-ESCCSSS-CEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CceEECCCCe-EEEEecCCC--ccEEEEEcCCC-C-ee-eeeecce-EEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 1245999999 667766543 36999999875 3 33 4554333 34454 47765 57777776663344455554
Q ss_pred CCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecC-----CCCCC-
Q 010654 156 AVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLG-----GFDTN- 229 (505)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 229 (505)
.++...++|+. ... +..+.+++|++.+++.++++..|+++++++..++. +..++.... .+...
T Consensus 413 ~~g~~~~~l~~------~~~---~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~--~~~l~~~~~~~~~~~~~~~~ 481 (741)
T 2ecf_A 413 LQGGQPQRLSK------APG---MHSASFARNASVYVDSWSNNSTPPQIELFRANGEK--IATLVENDLADPKHPYARYR 481 (741)
T ss_dssp TTCCCCEECCC------SCS---EEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE--EECSSCCCSSSTTSTTHHHH
T ss_pred cCCCCeeeccc------CCC---ceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe--EEEeccCcccccccchhhhh
Confidence 43543444432 111 12246789999999999999999999999986554 222222111 11111
Q ss_pred -Cc-eEEEEEEECCCC-ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCCc-----hhHHHHHHCCcEEEEEcc
Q 010654 230 -NY-FTERKWASASDG-TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAFN-----SSRLSLLDRGFIFAIAQI 300 (505)
Q Consensus 230 -~~-~~~~~~~~s~dG-~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~~-----~~~~~l~~~G~~v~~~d~ 300 (505)
.+ ..+.+.+++.|| ..|+++++.|++. .+.++.|+||++||+++... ...|. ...+.|+++||+|+.+|+
T Consensus 482 ~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~-~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 560 (741)
T 2ecf_A 482 EAQRPVEFGTLTAADGKTPLNYSVIKPAGF-DPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDN 560 (741)
T ss_dssp TTCCCEEEEEEECTTSSCEEEEEEECCSSC-CTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCcEEEEEEcCCCCEEEEEEEEeCCCC-CCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEec
Confidence 33 689999999999 9999999999876 55567899999999987642 22344 456789999999999999
Q ss_pred cCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh
Q 010654 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 380 (505)
Q Consensus 301 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~ 380 (505)
||+|+++..|.......++...++|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++.
T Consensus 561 rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 640 (741)
T 2ecf_A 561 RGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWG 640 (741)
T ss_dssp TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGG
T ss_pred CCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchh
Confidence 99999999888766667777889999999999999988999999999999999999999999999999999999998864
Q ss_pred hhccCCCCCCCcccc-cc-cCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 381 TTMLDPTIPLTTAEW-EE-WGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 381 ~~~~~~~~~~~~~~~-~~-~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
.+. ..+ .. ++.+ ..++. +...+|+..+.++++| +|++||+.|.+||+.++++++++|+.+++++
T Consensus 641 ~~~---------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~ 707 (741)
T 2ecf_A 641 LYD---------SHYTERYMDLPARNDAG---YREARVLTHIEGLRSP-LLLIHGMADDNVLFTNSTSLMSALQKRGQPF 707 (741)
T ss_dssp GSB---------HHHHHHHHCCTGGGHHH---HHHHCSGGGGGGCCSC-EEEEEETTCSSSCTHHHHHHHHHHHHTTCCC
T ss_pred hhc---------cccchhhcCCcccChhh---hhhcCHHHHHhhCCCC-EEEEccCCCCCCCHHHHHHHHHHHHHCCCce
Confidence 210 111 11 2444 23333 3557999999999997 9999999999999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 458 NILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++++|+ ++||.+..... .+....+.+||.++|+
T Consensus 708 ~~~~~~---~~~H~~~~~~~--~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 708 ELMTYP---GAKHGLSGADA--LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp EEEEET---TCCSSCCHHHH--HHHHHHHHHHHHHHHC
T ss_pred EEEEEC---CCCCCCCCCch--hHHHHHHHHHHHHhcC
Confidence 999998 88998753222 3445568999999986
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=360.45 Aligned_cols=461 Identities=13% Similarity=0.065 Sum_probs=318.4
Q ss_pred eEEEEECCCCCCC-CeEEEE----ecCCceEEEEEEeCCCcEEEEEecc-ccceEEEEEe----CCCCCceeeeec----
Q 010654 9 KAWLHKLEADQSN-DICLYH----EKDDIYSLGLQASESKKFLFIASES-KITRFVFYLD----VSKPEELRVLTP---- 74 (505)
Q Consensus 9 ~l~~~~lgt~~~~-~~~~~~----~~~~~~~~~~~~SpDg~~i~~~~~~-~~~~~l~~~d----~~~~~~~~~l~~---- 74 (505)
+|++|++.++... ...+.. .....+...++|||||+.++...++ .....||++| +++++ .+.++.
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~ 303 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEE 303 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEE
T ss_pred EEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccc
Confidence 7999999765210 011211 0123355688999998754443333 2457899999 88775 555542
Q ss_pred cccc-e------eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeE-EEEeCCEEEEEEec---
Q 010654 75 RVVG-V------DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD-IQLFIDHLAVYERE--- 143 (505)
Q Consensus 75 ~~~~-~------~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~d~l~~~~~~--- 143 (505)
...+ . ...|||||+.|++.+.... ...+|+++++++ +... .++..... +.. ..|.++.+++....
T Consensus 304 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-g~~~l~~~~~~~-~~~~-~lt~~~~~-v~~~~~~d~~~i~~~~~~~~~ 379 (719)
T 1z68_A 304 SRTGWAGGFFVSTPVFSYDAISYYKIFSDKD-GYKHIHYIKDTV-ENAI-QITSGKWE-AINIFRVTQDSLFYSSNEFEE 379 (719)
T ss_dssp CSSSCSSSSSCCCCEECTTSSCEEEEEECTT-SCEEEEEESSCS-TTCE-ECSCSSSC-EEEEEEECSSEEEEEESCGGG
T ss_pred cCCceEccccCCccEECCCCCeEEEEEEccC-CceEEEEEECCC-CceE-ecccCceE-EEEEEEEeCCEEEEEEecCCC
Confidence 2222 1 2349999999988654322 346999999876 4444 45543322 333 33444577777766
Q ss_pred -CCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE-EEEEEee
Q 010654 144 -GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS-VLKKIET 221 (505)
Q Consensus 144 -~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~ 221 (505)
.+..+++.++++.+....++|++. ++.....+..++++++++.+++.+++++.| .++++++.+++. ++...+.
T Consensus 380 ~~~~~~l~~~~~~~g~~~~~~l~~~----~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~ 454 (719)
T 1z68_A 380 YPGRRNIYRISIGSYPPSKKCVTCH----LRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENK 454 (719)
T ss_dssp CTTCBEEEEEECSSSSCCEEESSTT----TTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCH
T ss_pred CCceEEEEEEeCCCCCCCceeccCc----cCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecch
Confidence 455566666553211122333311 110000111235678899999999999888 588888877762 2333222
Q ss_pred ec-CCCCCCCc-eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCCch-hHHHH-HHCCcEEE
Q 010654 222 VL-GGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAFNS-SRLSL-LDRGFIFA 296 (505)
Q Consensus 222 ~~-~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~~~-~~~~l-~~~G~~v~ 296 (505)
.. ..+....+ .++.+++++.| .+|+++++.|++. ++.+++|+||++||+++... ...|.. ....| +++||+|+
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~-~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~ 532 (719)
T 1z68_A 455 ELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQF-DRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIA 532 (719)
T ss_dssp HHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTC-CSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEE
T ss_pred hhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCC-CCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEE
Confidence 11 12333334 67889999888 8999999999986 56678999999999987653 233432 23444 47899999
Q ss_pred EEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 297 IAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 297 ~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.+|+||+|+++..|.......++...++|+.++++++.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+
T Consensus 533 ~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 612 (719)
T 1z68_A 533 LVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPV 612 (719)
T ss_dssp EEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCC
T ss_pred EEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCc
Confidence 99999999999998877777777788999999999999998899999999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCCCcccc--cccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC
Q 010654 377 VDVLTTMLDPTIPLTTAEW--EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK 454 (505)
Q Consensus 377 ~d~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~ 454 (505)
.++..+. ..+ ..+|.|...+..+.+...+|+.++.++++||+|++||++|.+||+.++.+++++|++++
T Consensus 613 ~~~~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~ 683 (719)
T 1z68_A 613 SSWEYYA---------SVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQ 683 (719)
T ss_dssp CCTTTSB---------HHHHHHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTT
T ss_pred cChHHhc---------cccchhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCC
Confidence 8864320 112 11344421111223466899999999998569999999999999999999999999999
Q ss_pred CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 455 TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 455 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+++++++|+ ++||.+.. .........+.+||.++|+
T Consensus 684 ~~~~~~~~~---~~gH~~~~--~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 684 VDFQAMWYS---DQNHGLSG--LSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp CCCEEEEET---TCCTTCCT--HHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEEC---cCCCCCCc--ccHHHHHHHHHHHHHHhhC
Confidence 999999998 88998732 2233445568999999884
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=366.32 Aligned_cols=458 Identities=13% Similarity=0.125 Sum_probs=315.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecC-----CceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeeccc-cce-
Q 010654 8 DKAWLHKLEADQSNDICLYHEKD-----DIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRV-VGV- 79 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~-----~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~-~~~- 79 (505)
.+|++|++.++.. ...+ .... ......+.|||||++|++..... ....|+++|+++++ ...+.... .+.
T Consensus 228 ~~l~~~d~~~~~~-~~~l-~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 228 ISLHVIGLNGPTH-DLEM-MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV-CTKKHEDESEAWL 304 (723)
T ss_dssp EEEEEEESSSSCC-CEEC-CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC-EEEEEEEECSSCC
T ss_pred eEEEEEECCCCce-eEEe-eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEeccCCEE
Confidence 3799999977531 2222 2211 23445789999999886665543 46789999999986 55544221 121
Q ss_pred -----eEEeeeeCCEEEEE-EcCCC--CCCceEEEee-CCCCCC---ceEEEcCCCCceeeEEEEeCC--EEEEEEecCC
Q 010654 80 -----DTAASHRGNHFFIT-RRSDE--LFNSELLACP-VDNTSE---TTVLIPHRESVKLQDIQLFID--HLAVYEREGG 145 (505)
Q Consensus 80 -----~~~~s~dg~~l~~~-~~~~~--~~~~~l~~~~-~~~~~~---~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~ 145 (505)
...|||||++|++. +..++ ....+|++++ ..+ +. .. .++.........+.|++| .|++....++
T Consensus 305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~ 382 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN-SSNDNIQ-SITSGDWDVTKILAYDEKGNKIYFLSTEDL 382 (723)
T ss_dssp CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC-SSSCCCC-BSCCSSSCEEEEEEEETTTTEEEEEESSSC
T ss_pred eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC-CCcccee-EeecCCeEEEeeeEEcCCCCEEEEEEcCCC
Confidence 34599999999998 44432 1245899999 444 43 33 444322222333578775 6777776652
Q ss_pred eeEEEEEEcCCCCC-cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeee--
Q 010654 146 LQKITTYRLPAVGE-PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETV-- 222 (505)
Q Consensus 146 ~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-- 222 (505)
...+.+|+++.++. ...+|+.. +. ....+..+++++|++.+++.+++++.|..++. +..++.. +..+...
T Consensus 383 ~~~~~l~~~~~~~~~~~~~l~~~----~~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~-~~~~~~~~~ 455 (723)
T 1xfd_A 383 PRRRQLYSANTVGNFNRQCLSCD----LV-ENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKK-MFDLETNEH 455 (723)
T ss_dssp TTCCEEEEECSSTTCCCBCSSTT----SS-SSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTCCE-EEEEECCHH
T ss_pred CcceEEEEEeCCCCCCcceeccc----cc-CCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCCCE-EEEeccChh
Confidence 23344555554343 23333211 00 01112234678999999999999999987654 6544442 2222211
Q ss_pred c-CCCCCCCc-eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCC--chhHHHHHHCCcEEEE
Q 010654 223 L-GGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAF--NSSRLSLLDRGFIFAI 297 (505)
Q Consensus 223 ~-~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~--~~~~~~l~~~G~~v~~ 297 (505)
. ..+....+ ..+.+.+++.|| +++++++.|++. .+.+++|+||++||+++... ...| ....+.|+++||+|+.
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~ 533 (723)
T 1xfd_A 456 VKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATF-TDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 533 (723)
T ss_dssp HHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSC-CSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEC
T ss_pred hhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCC-CCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEE
Confidence 0 01122223 567788899999 999999999986 56678999999999987642 2233 3444567779999999
Q ss_pred EcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC----CCceeEEEec
Q 010654 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR----PDLFKAAVAA 373 (505)
Q Consensus 298 ~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~ 373 (505)
+|+||+|++|..|.......++...++|+.++++++.+++.+|++||+|+|+|+||++++.++.++ |++|+++|+.
T Consensus 534 ~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~ 613 (723)
T 1xfd_A 534 CDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSAL 613 (723)
T ss_dssp CCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEE
T ss_pred ECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEc
Confidence 999999999999887666666667899999999999999889999999999999999999999998 9999999999
Q ss_pred CCchhhhhhccCCCCCCCcccc--cccCCCC-CHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHH
Q 010654 374 VPFVDVLTTMLDPTIPLTTAEW--EEWGDPW-KEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAK 449 (505)
Q Consensus 374 ~~~~d~~~~~~~~~~~~~~~~~--~~~g~~~-~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~ 449 (505)
+|+.++..+. ..+ ..++.|. ..+. +...+|...+.+++ +| +||+||++|.+||+.++++++++
T Consensus 614 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P-~lii~G~~D~~v~~~~~~~~~~~ 680 (723)
T 1xfd_A 614 SPITDFKLYA---------SAFSERYLGLHGLDNRA---YEMTKVAHRVSALEEQQ-FLIIHPTADEKIHFQHTAELITQ 680 (723)
T ss_dssp SCCCCTTSSB---------HHHHHHHHCCCSSCCSS---TTTTCTHHHHTSCCSCE-EEEEEETTCSSSCHHHHHHHHHH
T ss_pred cCCcchHHhh---------hhccHhhcCCccCChhH---HHhcChhhHHhhcCCCC-EEEEEeCCCCCcCHhHHHHHHHH
Confidence 9988764210 111 1123331 2222 24567778888888 56 99999999999999999999999
Q ss_pred HHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 450 LREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 450 L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|+++++++++++|+ ++||.+.. ..........+.+||.++|+.
T Consensus 681 l~~~~~~~~~~~~~---~~~H~~~~-~~~~~~~~~~i~~fl~~~l~~ 723 (723)
T 1xfd_A 681 LIRGKANYSLQIYP---DESHYFTS-SSLKQHLYRSIINFFVECFRI 723 (723)
T ss_dssp HHHTTCCCEEEEET---TCCSSCCC-HHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHCCCCeEEEEEC---CCCccccc-CcchHHHHHHHHHHHHHHhcC
Confidence 99999999999998 88998632 222334455689999998863
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=230.40 Aligned_cols=279 Identities=16% Similarity=0.042 Sum_probs=195.1
Q ss_pred EEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEc
Q 010654 191 LRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGY 270 (505)
Q Consensus 191 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~h 270 (505)
+++..++..+|.++|..+..+........+.....+.......+++++++ ||.+|+++++.|++. ++.|+||++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-dg~~i~~~l~~p~~~----~~~P~vl~~h 159 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDERRQKGQARKVELYQKAAPLLSPPAERHELVV-DGIPMPVYVRIPEGP----GPHPAVIMLG 159 (386)
T ss_dssp HHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHHHHHGGGSSSCEEEEEEEE-TTEEEEEEEECCSSS----CCEEEEEEEC
T ss_pred HHHHHHHhhceeeeeccCCCCCHHHHHHHHHHHHHHhhcCCCeEEEEEEe-CCEEEEEEEEcCCCC----CCCCEEEEeC
Confidence 45566666677776665432100000001111112222235788888888 899999999988764 6789999998
Q ss_pred CCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeC
Q 010654 271 GSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRS 350 (505)
Q Consensus 271 Gg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S 350 (505)
|+.+.... +....+.|+++||+|+.+|+||+|.+. ..........+++.+++++|.+++.+|++||+|+|+|
T Consensus 160 G~~~~~~~--~~~~~~~l~~~G~~v~~~d~rG~G~s~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S 231 (386)
T 2jbw_A 160 GLESTKEE--SFQMENLVLDRGMATATFDGPGQGEMF------EYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRS 231 (386)
T ss_dssp CSSCCTTT--THHHHHHHHHTTCEEEEECCTTSGGGT------TTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEET
T ss_pred CCCccHHH--HHHHHHHHHhCCCEEEEECCCCCCCCC------CCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEC
Confidence 87654332 233377889999999999999987651 1112233445678899999999998999999999999
Q ss_pred hHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc--ccccccCCCCCHHHH-HHHHhCChhhcccCCCCCeE
Q 010654 351 AGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT--AEWEEWGDPWKEEFY-FYMKSYSPVDNVKAQNYPHI 427 (505)
Q Consensus 351 ~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~-~~~~~~sp~~~~~~~~~Pp~ 427 (505)
+||++++.++.+ |++|+++|+. |+.++..... ..+... .....+|.+...+.+ ..+..++|...+.++++| +
T Consensus 232 ~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P-~ 306 (386)
T 2jbw_A 232 LGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD--LETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACP-T 306 (386)
T ss_dssp HHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG--GSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSC-E
T ss_pred hHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH--hccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCC-E
Confidence 999999999998 8899999999 9988654331 110000 000224544334444 567788999889999998 9
Q ss_pred EEEccCCCCCCCCChHHHHHHHH-HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 428 LVTAGLNDPRVMYSEPAKFVAKL-REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 428 Li~~G~~D~~vp~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
|++||++|. ||+.++.+++++| +. ++++++++ ++||...... .+....+.+||.++|+..
T Consensus 307 Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~---~~gH~~~~~~---~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 307 YILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEK---DGDHCCHNLG---IRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEET---TCCGGGGGGT---THHHHHHHHHHHHHHTSS
T ss_pred EEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeC---CCCcCCccch---HHHHHHHHHHHHHhcCCc
Confidence 999999999 9999999999998 54 56778888 7899653222 233446899999999754
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=214.72 Aligned_cols=216 Identities=18% Similarity=0.111 Sum_probs=143.9
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
..|+......||.+|+++++.|++. ++.|+||++||+++......+....+.|+++||+|+.+|+||+|.++....
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~~----~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 104 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAEG----SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQA 104 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESSS----CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC---------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCCC----CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccc
Confidence 4444444457999999999999865 567999999999876655556667789999999999999999987654432
Q ss_pred HcccccC---------------CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 312 ENGKFLK---------------KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 312 ~~~~~~~---------------~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
....... ....+.|..++++++... +|++||+++|+|+||++++.+++..| ++++++...+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~ 181 (259)
T 4ao6_A 105 GREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMG 181 (259)
T ss_dssp ----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCC
T ss_pred ccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEeccc
Confidence 1111100 012356777888888654 68899999999999999999999887 56666654332
Q ss_pred hhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 377 VDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 377 ~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
.+. ... .++...+.++++| +|++||++|++||++++++++++|... +
T Consensus 182 ~~~----------------------~~~--------~~~~~~a~~i~~P-~Li~hG~~D~~vp~~~~~~l~~al~~~--~ 228 (259)
T 4ao6_A 182 VEG----------------------VNG--------EDLVRLAPQVTCP-VRYLLQWDDELVSLQSGLELFGKLGTK--Q 228 (259)
T ss_dssp TTS----------------------TTH--------HHHHHHGGGCCSC-EEEEEETTCSSSCHHHHHHHHHHCCCS--S
T ss_pred ccc----------------------ccc--------cchhhhhccCCCC-EEEEecCCCCCCCHHHHHHHHHHhCCC--C
Confidence 110 000 1345567788898 999999999999999999999998543 3
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.++++|+ + +|... ... +....+++||+++|+
T Consensus 229 k~l~~~~---G-~H~~~-p~~---e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 229 KTLHVNP---G-KHSAV-PTW---EMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEEEES---S-CTTCC-CHH---HHTHHHHHHHHHHCC
T ss_pred eEEEEeC---C-CCCCc-CHH---HHHHHHHHHHHHhcC
Confidence 3566665 3 67532 222 234458899999985
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=220.44 Aligned_cols=246 Identities=19% Similarity=0.141 Sum_probs=179.4
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+..+.+++++.||.+|+++++.|++. .++.|+||++||+.+... +......|+++||+|+.+|+||+|+++.
T Consensus 64 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~---~~~~p~vv~~HG~g~~~~---~~~~~~~l~~~G~~v~~~d~rG~g~s~~ 137 (337)
T 1vlq_A 64 KTVEAYDVTFSGYRGQRIKGWLLVPKLE---EEKLPCVVQYIGYNGGRG---FPHDWLFWPSMGYICFVMDTRGQGSGWL 137 (337)
T ss_dssp SSEEEEEEEEECGGGCEEEEEEEEECCS---CSSEEEEEECCCTTCCCC---CGGGGCHHHHTTCEEEEECCTTCCCSSS
T ss_pred CCeEEEEEEEEcCCCCEEEEEEEecCCC---CCCccEEEEEcCCCCCCC---CchhhcchhhCCCEEEEecCCCCCCccc
Confidence 4567899999999999999999999863 356899999999876532 3334467889999999999999996543
Q ss_pred hHHHcc-----------------cccCC----cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCce
Q 010654 309 QWYENG-----------------KFLKK----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLF 367 (505)
Q Consensus 309 ~~~~~~-----------------~~~~~----~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~ 367 (505)
...... ..... ...++|+.++++++.+++.+|++||+|+|+|+||++++.++.++| .+
T Consensus 138 ~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v 216 (337)
T 1vlq_A 138 KGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KA 216 (337)
T ss_dssp CCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SC
T ss_pred CCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-Cc
Confidence 200000 00000 146899999999999998899999999999999999999999988 58
Q ss_pred eEEEecCCchh-hhhhcc-CCCCCCCccccccc--CCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCCh
Q 010654 368 KAAVAAVPFVD-VLTTML-DPTIPLTTAEWEEW--GDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSE 442 (505)
Q Consensus 368 ~a~v~~~~~~d-~~~~~~-~~~~~~~~~~~~~~--g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~ 442 (505)
+++++.+|+.+ +..... ....+. ..+..+ ..+ ...+.+..+..++|...+.++++| +|++||+.|..||+.+
T Consensus 217 ~~~vl~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G~~D~~~p~~~ 293 (337)
T 1vlq_A 217 KALLCDVPFLCHFRRAVQLVDTHPY--AEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIP-ALFSVGLMDNICPPST 293 (337)
T ss_dssp CEEEEESCCSCCHHHHHHHCCCTTH--HHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSC-EEEEEETTCSSSCHHH
T ss_pred cEEEECCCcccCHHHHHhcCCCcch--HHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCC-EEEEeeCCCCCCCchh
Confidence 88888888543 222210 111110 011111 223 334455566778899889999987 9999999999999999
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 443 PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 443 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+.+++++|+. ++++++++ ++||.+. .. +....+.+||.++|+
T Consensus 294 ~~~~~~~l~~---~~~~~~~~---~~gH~~~--~~---~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 294 VFAAYNYYAG---PKEIRIYP---YNNHEGG--GS---FQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHHHHHCCS---SEEEEEET---TCCTTTT--HH---HHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCC---CcEEEEcC---CCCCCCc--ch---hhHHHHHHHHHHHHh
Confidence 9999988864 46788888 8899753 12 233468899999885
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=233.60 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=181.0
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC----CC-CCCch-hH---HHHHHCCcEEEEEc
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC----ND-PAFNS-SR---LSLLDRGFIFAIAQ 299 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~----~~-~~~~~-~~---~~l~~~G~~v~~~d 299 (505)
..+..+.+.+++.||.+|.++++.|++. +++|+||++||..... .. ..|.. .. +.|+++||+|+.+|
T Consensus 21 ~~~~~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 21 NDYIKREVMIPMRDGVKLHTVIVLPKGA----KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEEeCCCC----CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 3567788999999999999999999764 5789999999744321 11 11111 11 78999999999999
Q ss_pred ccCCCCCchhHHHcc-----cccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 300 IRGGGELGRQWYENG-----KFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
+||+|+++..+.... ...++..+++|+.++++||.++ ++.| .||+++|+||||++++++++.+|+.++|+|+.
T Consensus 97 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~ 175 (615)
T 1mpx_A 97 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPE 175 (615)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred CCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEec
Confidence 999999887654321 1222237899999999999998 7877 59999999999999999998889999999999
Q ss_pred CCchhhhh--hccCCCC-CCC----------------------cccccc-------------c------------CCCCC
Q 010654 374 VPFVDVLT--TMLDPTI-PLT----------------------TAEWEE-------------W------------GDPWK 403 (505)
Q Consensus 374 ~~~~d~~~--~~~~~~~-~~~----------------------~~~~~~-------------~------------g~~~~ 403 (505)
+|+.|+.. .+..... .+. ...|.. + ..+..
T Consensus 176 ~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 255 (615)
T 1mpx_A 176 SPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAY 255 (615)
T ss_dssp SCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSS
T ss_pred CCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCc
Confidence 99998432 1100000 000 000000 0 01110
Q ss_pred HHHHHHHHhCChhhcccC--CCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC---CCeEEEEecCCCCCCCCC----
Q 010654 404 EEFYFYMKSYSPVDNVKA--QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD---DNILLFKCELGAGHFSKS---- 474 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~--~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~---~~~~~~~~~~~~gH~~~~---- 474 (505)
-+++++.||+.++++ |++| +|++||..|.+ ++.++.+++++|+++|++ ++++++| . +|+...
T Consensus 256 ---d~~w~~~Sp~~~~~~~~I~~P-~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp---~-~H~~~~~~~~ 326 (615)
T 1mpx_A 256 ---DAFWQEQALDKVMARTPLKVP-TMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGP---W-RHSQVNYDGS 326 (615)
T ss_dssp ---CHHHHTTCHHHHHHTSCCCSC-EEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEES---C-CTTGGGSCCS
T ss_pred ---ChhhhhcChhhhhhccCCCCC-EEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECC---C-CCCCcccccc
Confidence 123567899999999 9998 99999999998 889999999999999754 6777776 3 575310
Q ss_pred --------ChHHHHHHHHHHHHHHHHhhCCC
Q 010654 475 --------GRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 475 --------~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
...........+++||+++|+..
T Consensus 327 ~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 327 ALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp EETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred ccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 00111112345799999999754
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=203.63 Aligned_cols=226 Identities=15% Similarity=0.148 Sum_probs=168.1
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+.+++++ +|..+.++++.|++. .++.|+||++||..+.. ..+......|+++||.|+.+|+||.|+....
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~---~~~~p~vv~~HG~~g~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~ 76 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA---DGPLPIVIVVQEIFGVH--EHIRDLCRRLAQEGYLAIAPELYFRQGDPNE 76 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC---CSCEEEEEEECCTTCSC--HHHHHHHHHHHHTTCEEEEECTTTTTCCGGG
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC---CCCCCEEEEEcCcCccC--HHHHHHHHHHHHCCcEEEEecccccCCCCCc
Confidence 45678888888 889999999999864 35689999999976543 2344556788999999999999998765443
Q ss_pred HHHcc-------cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 310 WYENG-------KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 310 ~~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
+.... .........+|+.++++++.+++ +|+++|+++|+|+||.+++.++.++|+ ++++++..+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~--- 151 (241)
T 3f67_A 77 YHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVG--- 151 (241)
T ss_dssp CCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSC---
T ss_pred hhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccC---
Confidence 22100 01112246899999999999988 888999999999999999999999887 6666665553210
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 383 MLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 383 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
.. ..+ ...+|...+.+++.| +|++||++|..+|+.++.+++++|++.+.+++++++
T Consensus 152 ----~~-------~~~------------~~~~~~~~~~~~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (241)
T 3f67_A 152 ----EK-------SLN------------SPKHPVDIAVDLNAP-VLGLYGAKDASIPQDTVETMRQALRAANATAEIVVY 207 (241)
T ss_dssp ----CC-------CSS------------SCCCHHHHGGGCCSC-EEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ----CC-------ccC------------CccCHHHhhhhcCCC-EEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 00 000 123566667777887 999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCC------ChHHHHHHHHHHHHHHHHh
Q 010654 463 KCELGAGHFSKS------GRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 463 ~~~~~~gH~~~~------~~~~~~~~~~~~~~fl~~~ 493 (505)
+ +.+|++.. ......+.+..+.+||.++
T Consensus 208 ~---~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 208 P---EADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp T---TCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred C---CCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8 88997642 1222334455688898753
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=231.39 Aligned_cols=254 Identities=16% Similarity=0.163 Sum_probs=181.4
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc-----CCCC-CCc---hhH-HHHHHCCcEEEEEc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI-----CNDP-AFN---SSR-LSLLDRGFIFAIAQ 299 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~-----~~~~-~~~---~~~-~~l~~~G~~v~~~d 299 (505)
.+..+.+.+++.||.+|.++++.|++. +++|+||++||.... .... .|. ... +.|+++||+|+.+|
T Consensus 34 ~~~~~~v~i~~~DG~~L~~~l~~P~~~----~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D 109 (652)
T 2b9v_A 34 DYIKREVMVPMRDGVKLYTVIVIPKNA----RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQD 109 (652)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CcEEEEEEEECCCCcEEEEEEEecCCC----CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEe
Confidence 467788999999999999999999764 578999999863321 1110 111 112 88999999999999
Q ss_pred ccCCCCCchhHHHcc-----cccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 300 IRGGGELGRQWYENG-----KFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
+||+|+++..+.... ...++..+++|+.++++||.++ +++| .||+++|+||||++++.+++++|+.++|+|+.
T Consensus 110 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~ 188 (652)
T 2b9v_A 110 IRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 188 (652)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEec
Confidence 999999988765321 1122247899999999999999 8887 59999999999999999998889999999999
Q ss_pred CCchhhhh--hcc-CCCCCCCc----------------------cccc------------------------c-cCCCCC
Q 010654 374 VPFVDVLT--TML-DPTIPLTT----------------------AEWE------------------------E-WGDPWK 403 (505)
Q Consensus 374 ~~~~d~~~--~~~-~~~~~~~~----------------------~~~~------------------------~-~g~~~~ 403 (505)
+|++|+.. .+. .....+.. ..|. + .+.|..
T Consensus 189 ~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (652)
T 2b9v_A 189 SPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAY 268 (652)
T ss_dssp EECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSS
T ss_pred ccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCC
Confidence 99988643 110 00000000 0000 0 011110
Q ss_pred HHHHHHHHhCChhhcccC--CCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC--CCCCeEEEEecCCCCCCCCC-----
Q 010654 404 EEFYFYMKSYSPVDNVKA--QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK--TDDNILLFKCELGAGHFSKS----- 474 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~--~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~--~~~~~~~~~~~~~~gH~~~~----- 474 (505)
-++++..||..++++ |++| +|++||..|.+ +..++.+++++|++++ +++++++.| .+|+...
T Consensus 269 ---d~yw~~~Sp~~~~~~~~I~~P-vLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp----~~H~~~~~~~~~ 339 (652)
T 2b9v_A 269 ---DAFWQGQALDKILAQRKPTVP-MLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGP----WRHSGVNYNGST 339 (652)
T ss_dssp ---SHHHHTTCHHHHHHHHCCCSC-EEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEES----CCTTGGGSCCSE
T ss_pred ---ChHHhcCChhhhhhcCCCCCC-EEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECC----CCCCCccccccc
Confidence 023467899999999 9998 99999999998 7789999999999998 888887776 3675410
Q ss_pred -------ChHHHHHHHHHHHHHHHHhhCCC
Q 010654 475 -------GRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 475 -------~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
...........+++||+++|+..
T Consensus 340 ~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 340 LGPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp ETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CCccccccccchhhhhhHHHHHHHHHhCCC
Confidence 00111122345799999999754
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=208.35 Aligned_cols=239 Identities=13% Similarity=0.090 Sum_probs=171.1
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
..+.+.+|..+.+++..|... ...++.|+||++|||+.. .....+......|+++||.|+.+|+||+|.....
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~-~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~----- 90 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQ-NENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNY----- 90 (276)
T ss_dssp EECCCBTTBEEEEECCCC-------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCS-----
T ss_pred ccccCCCCeEEEEEEeCCccc-ccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCC-----
Confidence 345667888887765444332 234678999999997533 2233455566788999999999999998763210
Q ss_pred cccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhh-CCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
......+.|+.++++++.++. .+|+++|+|+|+|+||++++.++.+ .+.+++++++.+|+.++...+.. ..
T Consensus 91 --~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~-~~-- 165 (276)
T 3hxk_A 91 --NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPS-DL-- 165 (276)
T ss_dssp --CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSS-SS--
T ss_pred --CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCc-ch--
Confidence 111256789999999998864 3788999999999999999999987 68899999999998875443211 10
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.+..+-.... ...+|...+.+++.| +|++||++|..||+.++.+++++|++.+.++++++++ +++|
T Consensus 166 ---~~~~~~~~~~-------~~~~~~~~~~~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~---~~~H 231 (276)
T 3hxk_A 166 ---SHFNFEIENI-------SEYNISEKVTSSTPP-TFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFE---SGPH 231 (276)
T ss_dssp ---SSSCCCCSCC-------GGGBTTTTCCTTSCC-EEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEES---CCCT
T ss_pred ---hhhhcCchhh-------hhCChhhccccCCCC-EEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEEC---CCCC
Confidence 1111111111 235777778888887 9999999999999999999999999999999999998 8899
Q ss_pred CCCCChH-----------HHHHHHHHHHHHHHHhhCCCCC
Q 010654 471 FSKSGRF-----------ERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 471 ~~~~~~~-----------~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
++..... ........+.+||.++.+..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 271 (276)
T 3hxk_A 232 GVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLEH 271 (276)
T ss_dssp TCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC-
T ss_pred CccccCccccccccccCchHHHHHHHHHHHHHhCcccccc
Confidence 7643222 2334455678999998865443
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-24 Score=200.67 Aligned_cols=236 Identities=11% Similarity=0.080 Sum_probs=165.5
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCcc--CCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLV--KLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~--~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
+..+.+.+ ..+|..+.+.+++|+... ...++.|+||++|||... .....|......|+++||.|+.+|+||+|..+
T Consensus 2 m~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 2 MQVEQRTL-NTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEEEEE-CSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred cceEEEEe-ccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 34566666 357778999999997310 234678999999997532 22334555667888999999999999976322
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhC--------------CCceeEE
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMR--------------PDLFKAA 370 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~--------------p~~~~a~ 370 (505)
. .....+.|+.++++++.+.. .+|++||+|+|+|+||++++.++.++ +.+++++
T Consensus 81 ~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T 3bxp_A 81 S---------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAI 151 (277)
T ss_dssp C---------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEE
T ss_pred c---------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEE
Confidence 1 22356789999999998763 26788999999999999999999875 6789999
Q ss_pred EecCCchhhhhhccCCCCCCCccccc-ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHH
Q 010654 371 VAAVPFVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAK 449 (505)
Q Consensus 371 v~~~~~~d~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~ 449 (505)
|+.+|+.++...+. .. ..+. .+-. .....+|...+.++..| +|++||++|..||+.++.+++++
T Consensus 152 v~~~p~~~~~~~~~-----~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~P-~lii~G~~D~~vp~~~~~~~~~~ 216 (277)
T 3bxp_A 152 ILGYPVIDLTAGFP-----TT-SAARNQITT--------DARLWAAQRLVTPASKP-AFVWQTATDESVPPINSLKYVQA 216 (277)
T ss_dssp EEESCCCBTTSSSS-----SS-HHHHHHHCS--------CGGGSBGGGGCCTTSCC-EEEEECTTCCCSCTHHHHHHHHH
T ss_pred EEeCCcccCCCCCC-----Cc-cccchhccc--------hhhhcCHhhccccCCCC-EEEEeeCCCCccChHHHHHHHHH
Confidence 99999877432110 00 0000 0000 11346777777777776 99999999999999999999999
Q ss_pred HHhcCCCCCeEEEEecCCCCCCCCCCh-------------HHHHHHHHHHHHHHHHhh
Q 010654 450 LREMKTDDNILLFKCELGAGHFSKSGR-------------FERLREAAFTYTFLMRAL 494 (505)
Q Consensus 450 L~~~~~~~~~~~~~~~~~~gH~~~~~~-------------~~~~~~~~~~~~fl~~~l 494 (505)
|++.+.++++++|+ +++|.+.... ....+....+.+||.++.
T Consensus 217 l~~~~~~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 217 MLQHQVATAYHLFG---SGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHTTCCEEEEECC---CC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCeEEEEEeC---CCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 99999999999998 8899653221 122344556889998764
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-24 Score=207.55 Aligned_cols=250 Identities=11% Similarity=0.076 Sum_probs=166.8
Q ss_pred CCceEEEEEEECCCCceeeEEEEE-eCCc-------------------cCCCCCCcEEEEEcCCCCcCCCCC---CchhH
Q 010654 229 NNYFTERKWASASDGTQIPICIVY-RKNL-------------------VKLDGSDPLLLYGYGSYEICNDPA---FNSSR 285 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~-p~~~-------------------~~~~~~~P~iv~~hGg~~~~~~~~---~~~~~ 285 (505)
..+..+.+.+.+.+| +.+.++. |+.. ....++.|+||++|||+....... |....
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~ 137 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLC 137 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHH
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHH
Confidence 356788899999898 6666676 7642 013457899999999865433322 34455
Q ss_pred HHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC----CCCCC-cEEEEeeChHHHHHHHH
Q 010654 286 LSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC----YCTKE-KLCIEGRSAGGLLIGAV 359 (505)
Q Consensus 286 ~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-rv~i~G~S~GG~~~~~~ 359 (505)
+.|+++ ||+|+.+|||++++.. ....++|+.++++|+.++. .+|++ ||+|+|+|+||++++.+
T Consensus 138 ~~la~~~g~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~ 206 (365)
T 3ebl_A 138 RRFVKLSKGVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHV 206 (365)
T ss_dssp HHHHHHHTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHH
Confidence 778876 9999999999876532 2356899999999999765 58999 99999999999999999
Q ss_pred HhhCCC---ceeEEEecCCchhhhhhccC----CCCCCCcc-----ccccc-CCCCCHHHHHHHHhCChhh----cccCC
Q 010654 360 LNMRPD---LFKAAVAAVPFVDVLTTMLD----PTIPLTTA-----EWEEW-GDPWKEEFYFYMKSYSPVD----NVKAQ 422 (505)
Q Consensus 360 ~~~~p~---~~~a~v~~~~~~d~~~~~~~----~~~~~~~~-----~~~~~-g~~~~~~~~~~~~~~sp~~----~~~~~ 422 (505)
+.+.++ .++++|+.+|+++....... ...+.... .|..+ ........ ...+|+. .+..+
T Consensus 207 a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~l~~~ 282 (365)
T 3ebl_A 207 AVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDH----PACNPFGPNGRRLGGL 282 (365)
T ss_dssp HHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTS----TTTCTTSTTCCCCTTS
T ss_pred HHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCC----cccCCCCCcchhhccC
Confidence 987665 79999999998874321100 00000000 00001 00000000 1123432 23333
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHhhCCCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK--SGRFERLREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~~fl~~~l~~~~~~ 500 (505)
.+||+||+||+.|..+ .++.+++++|+++|+++++++|+ +++|++. .......+.+..+.+||.++++.+...
T Consensus 283 ~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~---g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~~~ 357 (365)
T 3ebl_A 283 PFAKSLIIVSGLDLTC--DRQLAYADALREDGHHVKVVQCE---NATVGFYLLPNTVHYHEVMEEISDFLNANLYYGSHH 357 (365)
T ss_dssp CCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEET---TCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC-----
T ss_pred CCCCEEEEEcCcccch--hHHHHHHHHHHHCCCCEEEEEEC---CCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcccch
Confidence 4577999999999766 56799999999999999999998 8899753 112344455667899999999766543
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=202.97 Aligned_cols=234 Identities=15% Similarity=0.082 Sum_probs=167.0
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCchhHHHHHH-CCcEEEEEcccCCCCCc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFNSSRLSLLD-RGFIFAIAQIRGGGELG 307 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g 307 (505)
.+..+.+++++.|| .|++++++|++. +.|+||++|||+... ....+......|++ .||+|+.+|||+++++.
T Consensus 60 ~~~~~~~~~~~~~g-~i~~~~~~p~~~-----~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~ 133 (326)
T 3ga7_A 60 SMTTRTCAVPTPYG-DVTTRLYSPQPT-----SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR 133 (326)
T ss_dssp CCEEEEEEECCTTS-CEEEEEEESSSS-----CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred CcceEEEEeecCCC-CeEEEEEeCCCC-----CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 45668999999999 799999998754 239999999987332 23345556677877 79999999999887642
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCCc------eeEEEecCCchh
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPDL------FKAAVAAVPFVD 378 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~~------~~a~v~~~~~~d 378 (505)
....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.++++. ++++++.+|+.+
T Consensus 134 -----------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 134 -----------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred -----------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 2356799999999999874 57999999999999999999999887764 899999999876
Q ss_pred hhhhccCCCCCCCcccccccCC---CCCHHHHHH-HH--------hCChhh-----cccCCCCCeEEEEccCCCCCCCCC
Q 010654 379 VLTTMLDPTIPLTTAEWEEWGD---PWKEEFYFY-MK--------SYSPVD-----NVKAQNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~-~~--------~~sp~~-----~~~~~~~Pp~Li~~G~~D~~vp~~ 441 (505)
...... ...++. ....+...+ +. ..+|+. .+.+ ..||+||+||+.|+.+ .
T Consensus 203 ~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~li~~G~~D~~~--~ 269 (326)
T 3ga7_A 203 LQDSVS----------RRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTR-DVPPCFIASAEFDPLI--D 269 (326)
T ss_dssp CSCCHH----------HHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSS-CCCCEEEEEETTCTTH--H
T ss_pred cCCChh----------HhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhc-CCCCEEEEecCcCcCH--H
Confidence 432110 000000 000110000 00 112321 1222 3445999999999999 5
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC---ChHHHHHHHHHHHHHHHHhhCC
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSKS---GRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
++.+++++|+++|+++++++|+ +.+|++.. ......+....+.+||.++|+.
T Consensus 270 ~~~~~~~~l~~~g~~~~~~~~~---g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 270 DSRLLHQTLQAHQQPCEYKMYP---GTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHTTCCEEEEEET---TCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCcEEEEEeC---CCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999998 88997631 1123344566789999999864
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-24 Score=209.78 Aligned_cols=219 Identities=17% Similarity=0.151 Sum_probs=167.8
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC--------Cch--hHHHHHHCCcEEEEEcc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA--------FNS--SRLSLLDRGFIFAIAQI 300 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~--------~~~--~~~~l~~~G~~v~~~d~ 300 (505)
..+.+.+.+. ||..++++++.|+++ .+.+++|+||++||+++...... +.. ........|+.|+.+|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~-~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~ 221 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDV-NPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQC 221 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSC-CTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECC
T ss_pred cccceeeccCCCCcEEEEEEEcCCCC-CCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecC
Confidence 4567788998 999999999999986 56678999999999875432211 100 11234567899999999
Q ss_pred cCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh
Q 010654 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 380 (505)
Q Consensus 301 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~ 380 (505)
||.++++..|............+.|+.+++++++++..+|++||+|+|+|+||++++.++.++|++|+++++.+|..+.
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~- 300 (380)
T 3doh_A 222 PPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV- 300 (380)
T ss_dssp CTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-
T ss_pred CCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-
Confidence 9999998888754444455678899999999999987799999999999999999999999999999999999987421
Q ss_pred hhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 381 TTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
..+.+++ .| +|++||+.|..||+.++.+++++|+++|.++++
T Consensus 301 ------------------------------------~~~~~~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 343 (380)
T 3doh_A 301 ------------------------------------SKVERIKDIP-IWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRY 343 (380)
T ss_dssp ------------------------------------GGGGGGTTSC-EEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEE
T ss_pred ------------------------------------hhhhhccCCC-EEEEecCCCCccCHHHHHHHHHHHHHCCCceEE
Confidence 0111222 45 999999999999999999999999999999999
Q ss_pred EEEEecCCC---CCCCCCChHHHHHHHH--HHHHHHHHh
Q 010654 460 LLFKCELGA---GHFSKSGRFERLREAA--FTYTFLMRA 493 (505)
Q Consensus 460 ~~~~~~~~~---gH~~~~~~~~~~~~~~--~~~~fl~~~ 493 (505)
++|+ ++ +|++.... .....+. .+++||.++
T Consensus 344 ~~~~---~~~h~~h~~~~H~-~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 344 TEYE---KGFMEKHGWDPHG-SWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp EEEC---TTHHHHTTCCTTC-THHHHHTCHHHHHHHHTC
T ss_pred EEec---CCcccCCCCCCch-hHHHhcCCHHHHHHHHhh
Confidence 9998 66 33221111 1111222 578899765
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-24 Score=202.97 Aligned_cols=246 Identities=15% Similarity=0.120 Sum_probs=173.6
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
..+..+.+.+++.||..|+++++.|++. ++.|+||++||+.+. .. .+. ....|+++||.|+.+|+||.|++.
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~~----~~~p~vv~~HG~~~~~~~--~~~-~~~~l~~~g~~v~~~d~rg~g~s~ 124 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDKE----GPHPAIVKYHGYNASYDG--EIH-EMVNWALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESSC----SCEEEEEEECCTTCCSGG--GHH-HHHHHHHTTCEEEEECCTTTSSSC
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCCC----CCccEEEEEcCCCCCCCC--Ccc-cccchhhCCcEEEEecCCCCCCCC
Confidence 3457788899999999999999988753 568999999998765 32 122 334788899999999999999876
Q ss_pred hhHHHcccc-----cCC---------cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 308 RQWYENGKF-----LKK---------KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 308 ~~~~~~~~~-----~~~---------~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
..+...+.. ..+ ...++|+.++++++.++..+|++||+++|+|+||.+++.++..+|+ ++++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~ 203 (318)
T 1l7a_A 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEE
T ss_pred CcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEec
Confidence 543210000 000 2458999999999999988899999999999999999999999886 6677777
Q ss_pred CCchh-hhhhcc-CCCCCCCcc-cc-cccCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHH
Q 010654 374 VPFVD-VLTTML-DPTIPLTTA-EW-EEWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVA 448 (505)
Q Consensus 374 ~~~~d-~~~~~~-~~~~~~~~~-~~-~~~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~ 448 (505)
+|+.. +..... ....+.... .+ ...+.+ ...+.+..+..+++...+.++++| +|++||+.|..+|+.++.++++
T Consensus 204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~li~~g~~D~~~~~~~~~~~~~ 282 (318)
T 1l7a_A 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVP-VLMSIGLIDKVTPPSTVFAAYN 282 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSC-EEEEEETTCSSSCHHHHHHHHH
T ss_pred CCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCC-EEEEeccCCCCCCcccHHHHHh
Confidence 77543 222210 111111100 11 111112 122334445566788888888887 9999999999999999999988
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++.. ++++++++ +.||... .. ....+.+||.++|+
T Consensus 283 ~l~~---~~~~~~~~---~~~H~~~---~~---~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 283 HLET---KKELKVYR---YFGHEYI---PA---FQTEKLAFFKQILK 317 (318)
T ss_dssp HCCS---SEEEEEET---TCCSSCC---HH---HHHHHHHHHHHHHC
T ss_pred hcCC---CeeEEEcc---CCCCCCc---ch---hHHHHHHHHHHHhC
Confidence 8764 36778887 8899832 22 23458899999885
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=205.68 Aligned_cols=235 Identities=12% Similarity=0.067 Sum_probs=165.7
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCcc--CCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLV--KLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~--~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+.+.+.+.+|..+.+.++ |+... ...++.|+||++|||+.. .....|......|+++||.|+.+|+||++..+
T Consensus 18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~- 95 (283)
T 3bjr_A 18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ- 95 (283)
T ss_dssp CSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS-
T ss_pred CCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc-
Confidence 44567778889988888877 76520 134678999999997632 22223445567888999999999999987643
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCCc-------------eeEEEe
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPDL-------------FKAAVA 372 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~~-------------~~a~v~ 372 (505)
........|+.++++++.+.. .+|+++++|+|+|+||++++.++.++|++ ++++++
T Consensus 96 --------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 167 (283)
T 3bjr_A 96 --------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVL 167 (283)
T ss_dssp --------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEE
T ss_pred --------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEE
Confidence 112245788999999998763 37788999999999999999999999987 899999
Q ss_pred cCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHh
Q 010654 373 AVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 452 (505)
Q Consensus 373 ~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~ 452 (505)
.+|..++...+... ...+..+- . .+...+|...+.++++| +|++||++|..+|+.++.+++++|+.
T Consensus 168 ~~p~~~~~~~~~~~-----~~~~~~~~--~------~~~~~~~~~~~~~~~~P-~lii~G~~D~~~p~~~~~~~~~~l~~ 233 (283)
T 3bjr_A 168 GYPVISPLLGFPKD-----DATLATWT--P------TPNELAADQHVNSDNQP-TFIWTTADDPIVPATNTLAYATALAT 233 (283)
T ss_dssp ESCCCCTTSBC-------------CCC--C------CGGGGCGGGSCCTTCCC-EEEEEESCCTTSCTHHHHHHHHHHHH
T ss_pred cCCccccccccccc-----cchHHHHH--H------HhHhcCHHHhccCCCCC-EEEEEcCCCCCCChHHHHHHHHHHHH
Confidence 99987643221100 00011100 0 01335777777777887 99999999999999999999999999
Q ss_pred cCCCCCeEEEEecCCCCCCCCCChH-----------HHHHHHHHHHHHHHHh
Q 010654 453 MKTDDNILLFKCELGAGHFSKSGRF-----------ERLREAAFTYTFLMRA 493 (505)
Q Consensus 453 ~~~~~~~~~~~~~~~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~ 493 (505)
.+.++++++++ ++||.+..... ...+....+.+||.++
T Consensus 234 ~g~~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 234 AKIPYELHVFK---HGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp TTCCEEEEEEC---CCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCCCeEEEEeC---CCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 99999999998 88996432111 0122344578888763
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=208.22 Aligned_cols=243 Identities=18% Similarity=0.240 Sum_probs=173.8
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+..+.+.+.+.||.+|+++++.|++. ++.|+||++||+++.... |.. ...++++||.|+.+|+||.|++..
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~----~~~p~vv~~HG~g~~~~~--~~~-~~~~~~~G~~v~~~D~rG~g~s~~ 150 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKTE----GKHPALIRFHGYSSNSGD--WND-KLNYVAAGFTVVAMDVRGQGGQSQ 150 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESCS----SCEEEEEEECCTTCCSCC--SGG-GHHHHTTTCEEEEECCTTSSSSCC
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCCC----CCcCEEEEECCCCCCCCC--hhh-hhHHHhCCcEEEEEcCCCCCCCCC
Confidence 3567889999999999999999999753 678999999998766543 333 346789999999999999997655
Q ss_pred hHHHc------ccccC----------CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 309 QWYEN------GKFLK----------KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 309 ~~~~~------~~~~~----------~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
..... +.... ....++|+.++++++..+..+|++||+|+|+|+||.+++.++.++|+ ++++++
T Consensus 151 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl 229 (346)
T 3fcy_A 151 DVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVS 229 (346)
T ss_dssp CCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEE
T ss_pred CCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEE
Confidence 32110 00000 01246999999999999988899999999999999999999999997 999999
Q ss_pred cCCchhhhhhccCCCCCCC-cc---cccccCCC---CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 373 AVPFVDVLTTMLDPTIPLT-TA---EWEEWGDP---WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 373 ~~~~~d~~~~~~~~~~~~~-~~---~~~~~g~~---~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
.+|+.+............. .. .+..+..+ .....+..+...++...+.++++| +|+++|+.|..||+.++.+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P-~lii~G~~D~~~~~~~~~~ 308 (346)
T 3fcy_A 230 EYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGD-VLMCVGLMDQVCPPSTVFA 308 (346)
T ss_dssp ESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSE-EEEEEETTCSSSCHHHHHH
T ss_pred CCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCC-EEEEeeCCCCcCCHHHHHH
Confidence 9987542221111010000 00 11111111 234445555666777888888887 9999999999999998888
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+++++.. ++++++++ +.||.... . ....+.+||.+
T Consensus 309 ~~~~~~~---~~~~~~~~---~~gH~~~~---~---~~~~i~~fl~~ 343 (346)
T 3fcy_A 309 AYNNIQS---KKDIKVYP---DYGHEPMR---G---FGDLAMQFMLE 343 (346)
T ss_dssp HHTTCCS---SEEEEEET---TCCSSCCT---T---HHHHHHHHHHT
T ss_pred HHHhcCC---CcEEEEeC---CCCCcCHH---H---HHHHHHHHHHH
Confidence 8877654 66788888 88998752 1 12347888875
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-23 Score=206.30 Aligned_cols=227 Identities=12% Similarity=0.097 Sum_probs=160.8
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT 324 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 324 (505)
.+.+.++.|++. ++.|+||++||+.+.. +......|+++||+|+.+|+||+++.... .....++
T Consensus 144 ~l~~~l~~P~~~----~~~P~Vv~~hG~~~~~----~~~~a~~La~~Gy~V~a~D~rG~g~~~~~--------~~~~~~~ 207 (422)
T 3k2i_A 144 RVRATLFLPPGP----GPFPGIIDIFGIGGGL----LEYRASLLAGHGFATLALAYYNFEDLPNN--------MDNISLE 207 (422)
T ss_dssp TEEEEEEECSSS----CCBCEEEEECCTTCSC----CCHHHHHHHTTTCEEEEEECSSSTTSCSS--------CSCEETH
T ss_pred cEEEEEEcCCCC----CCcCEEEEEcCCCcch----hHHHHHHHHhCCCEEEEEccCCCCCCCCC--------cccCCHH
Confidence 688999999764 6789999999986542 34456789999999999999998765432 2224579
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc---cC---CCCCCCcc-----
Q 010654 325 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---LD---PTIPLTTA----- 393 (505)
Q Consensus 325 D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~---~~---~~~~~~~~----- 393 (505)
|+.+++++|.++..+|+++|+|+|+|+||++++.++.++|+ ++++|+.+|........ .. ...+....
T Consensus 208 d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (422)
T 3k2i_A 208 YFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVA 286 (422)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccC
Confidence 99999999999988899999999999999999999999997 89999888765321100 00 00000000
Q ss_pred -----cc-cccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChH-HHHHHHHHhcCCC-CCeEEEEec
Q 010654 394 -----EW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AKFVAKLREMKTD-DNILLFKCE 465 (505)
Q Consensus 394 -----~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~-~~~~~~L~~~~~~-~~~~~~~~~ 465 (505)
.+ ..+..+... ...+....+.++++| +|++||++|..+|..+. .+++++|++++++ +++++|+
T Consensus 287 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~P-~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~-- 357 (422)
T 3k2i_A 287 FSGLVDIVDIRNALVGG------YKNPSMIPIEKAQGP-ILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYP-- 357 (422)
T ss_dssp TTSCEECTTCBCCCTTG------GGSTTBCCGGGCCSC-EEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEET--
T ss_pred cchhHHHHHHHhhhhhc------ccccccccHHHCCCC-EEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEC--
Confidence 00 011111110 112333346677887 99999999999998866 6899999999988 8999998
Q ss_pred CCCCCCCCCC--------------------------hHHHHHHHHHHHHHHHHhhCCCC
Q 010654 466 LGAGHFSKSG--------------------------RFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 466 ~~~gH~~~~~--------------------------~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
++||.+... .....+....+.+||.++|+...
T Consensus 358 -gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~~ 415 (422)
T 3k2i_A 358 -GTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQ 415 (422)
T ss_dssp -TCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred -CCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 889986211 12234456678999999997643
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=198.96 Aligned_cols=235 Identities=18% Similarity=0.162 Sum_probs=168.5
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHH-CCcEEEEEcccCCCCCc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELG 307 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g 307 (505)
.+..+.+++++.||..|+++++.|.+ ++.|+||++|||... .....+......|++ .||+|+.+|||+++++.
T Consensus 57 ~~~~~~~~i~~~~G~~i~~~~~~P~~-----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 57 GVAVADDVVTGEAGRPVPVRIYRAAP-----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEECSC-----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred cceEEEEEecCCCCCeEEEEEEecCC-----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 56788899999999999999888864 467999999997632 223345556677774 59999999999887642
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhh
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVL 380 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~ 380 (505)
....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.++++ .+++.++.+|+++..
T Consensus 132 -----------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 -----------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred -----------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 235689999999999886 35789999999999999999999887655 489999999988753
Q ss_pred hhccCCCCCCCcccccccC-CC-CCHH----HHHHHH-------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHH
Q 010654 381 TTMLDPTIPLTTAEWEEWG-DP-WKEE----FYFYMK-------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFV 447 (505)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~g-~~-~~~~----~~~~~~-------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~ 447 (505)
... .+.++. .+ .... .+..+. ..+|.....-...||+||+||+.|..++ ++.+++
T Consensus 201 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~--~~~~~a 268 (317)
T 3qh4_A 201 PTA----------SRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRD--EVLDYA 268 (317)
T ss_dssp CCH----------HHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHH--HHHHHH
T ss_pred CCc----------CHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCch--hHHHHH
Confidence 100 000000 00 0111 111111 1244333222245679999999999985 899999
Q ss_pred HHHHhcCCCCCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHhhC
Q 010654 448 AKLREMKTDDNILLFKCELGAGHFSK---SGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 448 ~~L~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++|+++|+++++++|+ +.+|++. .......+....+.+||.++|+
T Consensus 269 ~~l~~~g~~~~l~~~~---g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 269 QRLLGAGVSTELHIFP---RACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHTTCCEEEEEEE---EEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEEEeC---CCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999 7799742 1122334455678999999885
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=203.17 Aligned_cols=287 Identities=13% Similarity=0.072 Sum_probs=169.4
Q ss_pred CCEEEEEEecCCCCceEEEEECCCCcEEEEEEe--e-ecCCCCC---CCceEEEEEEECCCCceeeEEEEEeCCccCCCC
Q 010654 188 SRILRFHYSSLRTPPSVYDYDMDMGISVLKKIE--T-VLGGFDT---NNYFTERKWASASDGTQIPICIVYRKNLVKLDG 261 (505)
Q Consensus 188 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~---~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~ 261 (505)
...+.|...+...|...+++.. +|+ +.+.. . ......+ ..+..+.+.+.+ +..+.+.++.|++....++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~g~--~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~ 81 (338)
T 2o7r_A 7 ETTGSSDPNTNLLKYLPIVLNP-DRT--ITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYNSA 81 (338)
T ss_dssp -----------CTTTCSCEECT-TSC--EECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGSSC
T ss_pred CCceeeccCcccccccceEECC-CCe--EEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcCCC
Confidence 3445666666556655555554 343 22111 1 1111222 346778888876 4557778888875201346
Q ss_pred CCcEEEEEcCCCCcCCCCC---CchhHHHHH-HCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 262 SDPLLLYGYGSYEICNDPA---FNSSRLSLL-DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~---~~~~~~~l~-~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
+.|+||++|||+....... |......|+ ++||+|+.+|+||+++.. ....++|+.++++|+.++.
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-----------~~~~~~d~~~~~~~l~~~~ 150 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR-----------LPAAYDDAMEALQWIKDSR 150 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------TTHHHHHHHHHHHHHHTCC
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------CchHHHHHHHHHHHHHhCC
Confidence 7899999999875433322 455567787 789999999999977532 2356899999999999863
Q ss_pred ------CCCCCcEEEEeeChHHHHHHHHHhhCCC--------ceeEEEecCCchhhhhhcc----CCCCCCCcc-----c
Q 010654 338 ------YCTKEKLCIEGRSAGGLLIGAVLNMRPD--------LFKAAVAAVPFVDVLTTML----DPTIPLTTA-----E 394 (505)
Q Consensus 338 ------~~d~~rv~i~G~S~GG~~~~~~~~~~p~--------~~~a~v~~~~~~d~~~~~~----~~~~~~~~~-----~ 394 (505)
.+|++|++|+|+|+||++++.++.++|+ +++++|+.+|+.+...... ....+.... .
T Consensus 151 ~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T 2o7r_A 151 DEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLI 230 (338)
T ss_dssp CHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCHHHHHHH
T ss_pred cchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCHHHHHHH
Confidence 2677999999999999999999998888 8999999999865422100 000000000 0
Q ss_pred cccc---CCCCCHHHHHHHHhCCh---hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 395 WEEW---GDPWKEEFYFYMKSYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 395 ~~~~---g~~~~~~~~~~~~~~sp---~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
|..+ +...+......+...+| +..+.++.+| +|++||++|..++ ++.+++++|++.+.++++++++ ++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P-~Lvi~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~---g~ 304 (338)
T 2o7r_A 231 WELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWR-VMVVGCHGDPMID--RQMELAERLEKKGVDVVAQFDV---GG 304 (338)
T ss_dssp HHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCE-EEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEES---SC
T ss_pred HHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCC-EEEEECCCCcchH--HHHHHHHHHHHCCCcEEEEEEC---CC
Confidence 0000 00000000000000011 1112223344 9999999999997 6788999999999999999998 88
Q ss_pred CCCCCCChH-HHHHHHHHHHHHHHHhhCC
Q 010654 469 GHFSKSGRF-ERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 469 gH~~~~~~~-~~~~~~~~~~~fl~~~l~~ 496 (505)
||.+....+ ...+....+.+||.++++.
T Consensus 305 gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 305 YHAVKLEDPEKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp CTTGGGTCHHHHHHHHHHHHHHHC-----
T ss_pred ceEEeccChHHHHHHHHHHHHHHHhhccc
Confidence 997643222 2233455689999988754
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=196.96 Aligned_cols=240 Identities=10% Similarity=0.051 Sum_probs=163.2
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccC--------------CCCCCcEEEEEcCCCCcCCCCC---CchhHHHHH-HC
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVK--------------LDGSDPLLLYGYGSYEICNDPA---FNSSRLSLL-DR 291 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~--------------~~~~~P~iv~~hGg~~~~~~~~---~~~~~~~l~-~~ 291 (505)
.+..+.+.+.+ +..+.+.++.|++. . ..++.|+||++|||+....... |......|+ ++
T Consensus 69 ~v~~~dv~~~~--~~~l~~~~~~P~~~-~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~ 145 (351)
T 2zsh_A 69 GVFSFDVLIDR--RINLLSRVYRPAYA-DQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLC 145 (351)
T ss_dssp TEEEEEEEEET--TTTEEEEEEEECCT-TCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH
T ss_pred CceEEEEEecC--CCCeEEEEEecCCc-cccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHc
Confidence 45667777765 45578888888764 2 2467899999999865333222 455567788 78
Q ss_pred CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC----CCCCC-cEEEEeeChHHHHHHHHHhhCCC-
Q 010654 292 GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC----YCTKE-KLCIEGRSAGGLLIGAVLNMRPD- 365 (505)
Q Consensus 292 G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-rv~i~G~S~GG~~~~~~~~~~p~- 365 (505)
||+|+.+|+||++++. ....++|+.++++|+.++. .+|++ ||+|+|+|+||.+++.++.++++
T Consensus 146 g~~vv~~d~rg~~~~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~ 214 (351)
T 2zsh_A 146 KCVVVSVNYRRAPENP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES 214 (351)
T ss_dssp TSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCCCCCC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc
Confidence 9999999999977542 2256799999999999865 47899 99999999999999999998888
Q ss_pred --ceeEEEecCCchhhhhhccC----CCCCCCcc-----cccccC-CCCCHHHHHHHHhCChh----hcccCCCCCeEEE
Q 010654 366 --LFKAAVAAVPFVDVLTTMLD----PTIPLTTA-----EWEEWG-DPWKEEFYFYMKSYSPV----DNVKAQNYPHILV 429 (505)
Q Consensus 366 --~~~a~v~~~~~~d~~~~~~~----~~~~~~~~-----~~~~~g-~~~~~~~~~~~~~~sp~----~~~~~~~~Pp~Li 429 (505)
+++++|+.+|+.+....... ...+.... .|..+. ....... ...+|+ ..+.++++||+|+
T Consensus 215 ~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~i~~pP~Li 290 (351)
T 2zsh_A 215 GIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREH----PACNPFSPRGKSLEGVSFPKSLV 290 (351)
T ss_dssp TCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTS----TTTCTTSTTSCCCTTCCCCEEEE
T ss_pred CCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCC----cccCCCCCCccchhhCCCCCEEE
Confidence 89999999998763211000 00000000 000000 0000000 011232 3445556767999
Q ss_pred EccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHH
Q 010654 430 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMR 492 (505)
Q Consensus 430 ~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~ 492 (505)
+||++|..++ ++.+++++|++.+.++++++++ ++||.+.. ......+....+.+||.+
T Consensus 291 i~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~---g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 291 VVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLE---KATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEETTSTTHH--HHHHHHHHHHHTTCCEEEEEET---TCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEcCCCcchH--HHHHHHHHHHHcCCCEEEEEEC---CCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 9999999986 7889999999999999999998 88997643 112223344567888864
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=186.63 Aligned_cols=211 Identities=14% Similarity=0.100 Sum_probs=158.2
Q ss_pred eEE--EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC---CCCchhHHHHHHCCcEEEEEcccCCCCC
Q 010654 232 FTE--RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND---PAFNSSRLSLLDRGFIFAIAQIRGGGEL 306 (505)
Q Consensus 232 ~~~--~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 306 (505)
..| .+.+++.|| ++.++++.|++ ++.|+||++||.++.... ..|......|+++||.|+.+|+||.|..
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 93 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE-----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRS 93 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS-----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTC
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC-----CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCC
Confidence 345 888999999 89888665543 457999999996432211 2234456788999999999999998865
Q ss_pred chhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC
Q 010654 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP 386 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 386 (505)
...+ ......++|+.++++++.+++. ++++++++|+|+||.+++.++.++|+ ++++|+.+|..+...
T Consensus 94 ~~~~------~~~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~----- 160 (249)
T 2i3d_A 94 QGEF------DHGAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD----- 160 (249)
T ss_dssp CSCC------CSSHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-----
T ss_pred CCCC------CCccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-----
Confidence 4322 1223456999999999998854 77899999999999999999999998 999999988765210
Q ss_pred CCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHh-cCCCCCeEEEEec
Q 010654 387 TIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE-MKTDDNILLFKCE 465 (505)
Q Consensus 387 ~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~-~~~~~~~~~~~~~ 465 (505)
...+.++++| +|+++|+.|..+|+.++.++++.+.. .+.++++++++
T Consensus 161 -----------------------------~~~~~~~~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (249)
T 2i3d_A 161 -----------------------------FSFLAPCPSS-GLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLP-- 208 (249)
T ss_dssp -----------------------------CTTCTTCCSC-EEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEET--
T ss_pred -----------------------------hhhhcccCCC-EEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEEC--
Confidence 0113345677 99999999999999999999999986 45677888888
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 466 LGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 466 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+++|.... .... ....+.+||.+++...
T Consensus 209 -g~~H~~~~-~~~~--~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 209 -GANHFFNG-KVDE--LMGECEDYLDRRLNGE 236 (249)
T ss_dssp -TCCTTCTT-CHHH--HHHHHHHHHHHHHTTC
T ss_pred -CCCccccc-CHHH--HHHHHHHHHHHhcCCC
Confidence 88998763 2332 2335889999998654
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-23 Score=191.88 Aligned_cols=238 Identities=18% Similarity=0.270 Sum_probs=161.5
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
++. .||.+|+++++.|++. .++.|+||++||.++......|......|+++||.|+.+|+||+|.+......
T Consensus 5 ~~~-~~g~~l~~~~~~p~~~---~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~---- 76 (251)
T 2wtm_A 5 YID-CDGIKLNAYLDMPKNN---PEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFED---- 76 (251)
T ss_dssp EEE-ETTEEEEEEEECCTTC---CSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG----
T ss_pred EEe-cCCcEEEEEEEccCCC---CCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCcccc----
Confidence 344 4889999988877642 24578999999987653233455566788899999999999999876432210
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC----C-CC-CC
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD----P-TI-PL 390 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~----~-~~-~~ 390 (505)
.......+|+.++++++.+...+ +++.++|||+||.+++.++.++|++++++|+.+|.......... . .. +.
T Consensus 77 ~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T 2wtm_A 77 HTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPE 154 (251)
T ss_dssp CCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTT
T ss_pred CCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCch
Confidence 11123468888889998766434 48999999999999999999999999999999987543221100 0 00 00
Q ss_pred Cccccc-cc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 391 TTAEWE-EW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 391 ~~~~~~-~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
....+. .+ +.......+..+...++...+.++++| +|++||++|..+|++.+.++++.+. +.++++++ ++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~---~~ 226 (251)
T 2wtm_A 155 NIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKP-VLIVHGDQDEAVPYEASVAFSKQYK----NCKLVTIP---GD 226 (251)
T ss_dssp BCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSC-EEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEET---TC
T ss_pred hcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCC-EEEEEeCCCCCcChHHHHHHHHhCC----CcEEEEEC---CC
Confidence 000000 11 100111223333345566667778888 9999999999999999988877663 45677887 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 469 GHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
||.. ...++.+ ...+.+||.+++.
T Consensus 227 gH~~-~~~~~~~--~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 227 THCY-DHHLELV--TEAVKEFMLEQIA 250 (251)
T ss_dssp CTTC-TTTHHHH--HHHHHHHHHHHHC
T ss_pred Cccc-chhHHHH--HHHHHHHHHHhcc
Confidence 9987 5554433 3368899998874
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=192.46 Aligned_cols=214 Identities=15% Similarity=0.105 Sum_probs=156.7
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc-
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN- 313 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~- 313 (505)
.+++++.||..+.++++.|++ ++.|+||++||..+... .|......|+++||.|+.+|+||.|..+..+...
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~~-----~~~p~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 77 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPAK-----APAPVIVIAQDIFGVNA--FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQD 77 (236)
T ss_dssp TCCEECTTSCEECEEEECCSS-----CSEEEEEEECCTTBSCH--HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTC
T ss_pred eEEEecCCCCeEEEEEECCCC-----CCCCEEEEEcCCCCCCH--HHHHHHHHHHhCCcEEEeccccccCCCcccccccc
Confidence 345778899999999877753 46799999999876532 3555567888999999999999988664311000
Q ss_pred ----------ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 314 ----------GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 314 ----------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
..........+|+.++++++.++..++ ++++++|+|+||.+++.++..+| ++++++.+|....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~---- 150 (236)
T 1zi8_A 78 ERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE---- 150 (236)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG----
T ss_pred hhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc----
Confidence 001122345789999999998886655 69999999999999999999887 7888877663210
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
++...+.+++.| +|+++|++|..+|++++.++++.+++.+ ++++++++
T Consensus 151 ------------------------------~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 198 (236)
T 1zi8_A 151 ------------------------------KQLNKVPEVKHP-ALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYE 198 (236)
T ss_dssp ------------------------------GCGGGGGGCCSC-EEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEET
T ss_pred ------------------------------cchhhhhhcCCC-EEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEEC
Confidence 122334556677 9999999999999999999999998766 77888887
Q ss_pred ecCCCCCCCCCChH------HHHHHHHHHHHHHHHhhCCC
Q 010654 464 CELGAGHFSKSGRF------ERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 464 ~~~~~gH~~~~~~~------~~~~~~~~~~~fl~~~l~~~ 497 (505)
+++|.+..... ...+....+.+||.++++..
T Consensus 199 ---~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 235 (236)
T 1zi8_A 199 ---EAGHSFARTGSSGYVASAAALANERTLDFLVPLQSRK 235 (236)
T ss_dssp ---TCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC--
T ss_pred ---CCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 78997643211 12233456899999998653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=200.90 Aligned_cols=228 Identities=17% Similarity=0.128 Sum_probs=156.5
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcch
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 322 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~ 322 (505)
.|+++++.|++. ++.|+||++|||+..... ..+......|++ .||+|+.+|||++++.. ....
T Consensus 66 ~i~~~~~~p~~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~~~~ 130 (322)
T 3fak_A 66 GCAAEWVRAPGC----QAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------FPAA 130 (322)
T ss_dssp TEEEEEEECTTC----CTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHH
T ss_pred CeEEEEEeCCCC----CCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------CCcH
Confidence 488888888754 568999999998643322 223334456666 59999999999887542 2356
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc----eeEEEecCCchhhhhhcc-----CCCCCC-Cc
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL----FKAAVAAVPFVDVLTTML-----DPTIPL-TT 392 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~~-----~~~~~~-~~ 392 (505)
++|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++++.+|++++..... ....+. ..
T Consensus 131 ~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~ 209 (322)
T 3fak_A 131 VEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAP 209 (322)
T ss_dssp HHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCCSCCS
T ss_pred HHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCcccCH
Confidence 79999999999998 57999999999999999999998876664 899999999988532110 000000 00
Q ss_pred ccc----ccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 393 AEW----EEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 393 ~~~----~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
..+ ..| +.... . ....+|+....+ ..||+||+||+.|..+ .++.+++++|+++|+++++++|+ +
T Consensus 210 ~~~~~~~~~~~~~~~~-~----~~~~sp~~~~~~-~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~---g 278 (322)
T 3fak_A 210 GGINKMAARYLNGADA-K----HPYASPNFANLK-GLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWD---D 278 (322)
T ss_dssp SHHHHHHHHHHTTSCT-T----CTTTCGGGSCCT-TCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEET---T
T ss_pred HHHHHHHHHhcCCCCC-C----CcccCCCccccc-CCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeC---C
Confidence 000 001 11000 0 012456633222 4556999999999885 68999999999999999999998 8
Q ss_pred CCCCCCC---ChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 468 AGHFSKS---GRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 468 ~gH~~~~---~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
.+|++.. ......+....+.+||.++|+....
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 313 (322)
T 3fak_A 279 MIHVWHAFHPMLPEGKQAIVRVGEFMREQWAALAA 313 (322)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC---
T ss_pred ceeehhhccCCCHHHHHHHHHHHHHHHHHHhcchh
Confidence 8997531 1223344566789999999975433
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=195.00 Aligned_cols=239 Identities=13% Similarity=0.070 Sum_probs=167.5
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHHC-CcEEEEEcccCCCCCc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELG 307 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g 307 (505)
....+.+++++.+| .++++++.|++. .++.|+||++|||+.. .....|......|+++ ||.|+.+|+||++++.
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~ 120 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGV---EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK 120 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTC---CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCC---CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 45778889998888 899999988763 3567999999997532 2334466667788885 9999999999988643
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhh
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVL 380 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~ 380 (505)
. ...++|+.++++|+.++. .+|+++++|+|+|+||.+++.++.++|+ .++++++.+|..+..
T Consensus 121 ~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~ 189 (310)
T 2hm7_A 121 F-----------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYD 189 (310)
T ss_dssp T-----------THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCC
T ss_pred C-----------CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCC
Confidence 2 245789999999998874 3688999999999999999999988776 689999999987753
Q ss_pred hhccCCCCCCCcccccccC-CC-CCHHHHHHH-------------HhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 381 TTMLDPTIPLTTAEWEEWG-DP-WKEEFYFYM-------------KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~-------------~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
... . ...+..+. .+ .......++ ...+|.....-...||+||+||++|..+ .++.+
T Consensus 190 ~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~P~lii~G~~D~~~--~~~~~ 260 (310)
T 2hm7_A 190 PAH---P----PASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKL 260 (310)
T ss_dssp TTS---C----CHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHH
T ss_pred ccc---C----CcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCCCCEEEEEecCCCch--HHHHH
Confidence 110 0 00000000 00 011110000 1234543222123446999999999988 68999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCC---ChHHHHHHHHHHHHHHHHhhC
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKS---GRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++++|+++|+++++++|+ +.+|++.. ......+....+.+||.++|+
T Consensus 261 ~~~~l~~~g~~~~~~~~~---g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 261 YAEALNKAGVKVEIENFE---DLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHHHHTTCCEEEEEEE---EEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCEEEEEeC---CCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999 67896531 112223345568999998874
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=203.62 Aligned_cols=226 Identities=15% Similarity=0.148 Sum_probs=158.4
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT 324 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 324 (505)
.+.++++.|++. ++.|+||++||+.+.. +......|+++||+|+.+|+||.++..... ....++
T Consensus 160 ~l~~~l~~P~~~----~~~P~Vv~lhG~~~~~----~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~--------~~~~~~ 223 (446)
T 3hlk_A 160 RVRGTLFLPPEP----GPFPGIVDMFGTGGGL----LEYRASLLAGKGFAVMALAYYNYEDLPKTM--------ETLHLE 223 (446)
T ss_dssp TEEEEEEECSSS----CCBCEEEEECCSSCSC----CCHHHHHHHTTTCEEEEECCSSSTTSCSCC--------SEEEHH
T ss_pred eEEEEEEeCCCC----CCCCEEEEECCCCcch----hhHHHHHHHhCCCEEEEeccCCCCCCCcch--------hhCCHH
Confidence 688999998754 6789999999986542 334467899999999999999987654322 224589
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc---cC---CCCCCCc------
Q 010654 325 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---LD---PTIPLTT------ 392 (505)
Q Consensus 325 D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~---~~---~~~~~~~------ 392 (505)
|+.++++++.++..+|+++|+|+|+|+||++++.++.++|+ ++++|+.+|........ .. ...+...
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVT 302 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhccccc
Confidence 99999999999988999999999999999999999999997 88988888865321100 00 0000000
Q ss_pred ----ccc-cccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChH-HHHHHHHHhcCCC-CCeEEEEec
Q 010654 393 ----AEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AKFVAKLREMKTD-DNILLFKCE 465 (505)
Q Consensus 393 ----~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~-~~~~~~L~~~~~~-~~~~~~~~~ 465 (505)
..+ ..+..+.... ..+....+.++++| +|++||++|..+|+.+. .+++++|++++++ +++++|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~P-vLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~p-- 373 (446)
T 3hlk_A 303 KDGYADIVDVLNSPLEGP------DQKSFIPVERAEST-FLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYP-- 373 (446)
T ss_dssp SSSCEECTTCBCCTTSGG------GGGGBCCGGGCCSE-EEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEET--
T ss_pred cchHHHHHHHHhchhhcc------ccccccCHHHCCCC-EEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEEC--
Confidence 000 0111111110 01122235566776 99999999999999555 7999999999998 8999998
Q ss_pred CCCCCCCCC--------------------------ChHHHHHHHHHHHHHHHHhhCCC
Q 010654 466 LGAGHFSKS--------------------------GRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 466 ~~~gH~~~~--------------------------~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
++||.+.. +.....+.+..+.+||.++|+..
T Consensus 374 -gagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 374 -ETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp -TBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred -CCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 88997620 11123445667899999999753
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=183.45 Aligned_cols=215 Identities=15% Similarity=0.115 Sum_probs=156.6
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+.+.+++ ||.++.++++.|++ +.|+||++||+.+....+.+......|+++||.|+.+|+||.|.....
T Consensus 9 ~~~~~~~~~~~-~g~~l~~~~~~p~~------~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 81 (223)
T 2o2g_A 9 QPQEYAVSVSV-GEVKLKGNLVIPNG------ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEID 81 (223)
T ss_dssp CCCEEEEEEEE-TTEEEEEEEECCTT------CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHH
T ss_pred CceeeEEEEec-CCeEEEEEEecCCC------CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCcc
Confidence 45677888886 89999998777653 479999999987655443344556788899999999999987654332
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 389 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 389 (505)
..............+|+.++++++..++.+|+++++++|+|+||.+++.++.++|++++++++.+|..++..
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-------- 153 (223)
T 2o2g_A 82 LRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP-------- 153 (223)
T ss_dssp HHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT--------
T ss_pred chhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH--------
Confidence 211000011224468899999999999888999999999999999999999999999999999998654210
Q ss_pred CCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 390 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 390 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
..+.++++| +|+++|+.|..+|. ...+.+++.+.+++++.++ +++
T Consensus 154 ---------------------------~~~~~~~~P-~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~~---~~~ 198 (223)
T 2o2g_A 154 ---------------------------SALPHVKAP-TLLIVGGYDLPVIA----MNEDALEQLQTSKRLVIIP---RAS 198 (223)
T ss_dssp ---------------------------TTGGGCCSC-EEEEEETTCHHHHH----HHHHHHHHCCSSEEEEEET---TCC
T ss_pred ---------------------------HHHhcCCCC-EEEEEccccCCCCH----HHHHHHHhhCCCeEEEEeC---CCC
Confidence 123344566 99999999999973 2345556667778888887 789
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
|.+.... ........+.+||.++|+
T Consensus 199 H~~~~~~-~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 199 HLFEEPG-ALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TTCCSTT-HHHHHHHHHHHHHHHHCC
T ss_pred cccCChH-HHHHHHHHHHHHHHHhcC
Confidence 9864321 112234468899999874
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-22 Score=190.44 Aligned_cols=241 Identities=16% Similarity=0.083 Sum_probs=167.0
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCC-cCCCCCCchhHHHHHHC-CcEEEEEcccCCCCC
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE-ICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGEL 306 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~-~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~ 306 (505)
..+..+.+++++.+| .|++.++.|++. ++.|+||++|||+. ......|......|+++ ||.|+.+||||++++
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~ 135 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKTQ----GPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPEN 135 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSSC----SCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCCC----CCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCC
Confidence 456788999998888 799998888753 56899999999763 22334466666788764 999999999998864
Q ss_pred chhHHHcccccCCcchHHHHHHHHHHHHHcCC-C-CCCcEEEEeeChHHHHHHHHHhhCCCce---eEEEecCCchhhhh
Q 010654 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNCY-C-TKEKLCIEGRSAGGLLIGAVLNMRPDLF---KAAVAAVPFVDVLT 381 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~-d~~rv~i~G~S~GG~~~~~~~~~~p~~~---~a~v~~~~~~d~~~ 381 (505)
. ....++|+.++++|+.+... . |++||+|+|+|+||.+++.++.+++++. +++++.+|+++...
T Consensus 136 ~-----------~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~ 204 (323)
T 3ain_A 136 K-----------FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDL 204 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCS
T ss_pred C-----------CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCC
Confidence 2 22467899999999988631 1 7899999999999999999998887765 88999999876421
Q ss_pred hc-----cCCCCCCCccc----cccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 382 TM-----LDPTIPLTTAE----WEEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 382 ~~-----~~~~~~~~~~~----~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
.. ......+.... +..| +.+..... ...+|+.. .-...||+||++|+.|..+ .++.+++++|+
T Consensus 205 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~sp~~~-~l~~l~P~lii~G~~D~l~--~~~~~~a~~l~ 277 (323)
T 3ain_A 205 ITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLD----FRFSPILA-DLNDLPPALIITAEHDPLR--DQGEAYANKLL 277 (323)
T ss_dssp CCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGC----TTTCGGGS-CCTTCCCEEEEEETTCTTH--HHHHHHHHHHH
T ss_pred CCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCC----cccCcccC-cccCCCHHHEEECCCCccH--HHHHHHHHHHH
Confidence 10 00000000000 0001 11000000 12355543 2123456999999999988 58899999999
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCC---hHHHHHHHHHHHHHHHHhhC
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSG---RFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 495 (505)
++|+++++++|+ +.+|++... .....+....+.+||.++|+
T Consensus 278 ~ag~~~~~~~~~---g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 278 QSGVQVTSVGFN---NVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HTTCCEEEEEET---TCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEEC---CCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 999999999998 889976421 12233445568999999875
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=192.69 Aligned_cols=247 Identities=19% Similarity=0.192 Sum_probs=168.5
Q ss_pred CCceEEEEEEECCCCc-eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCchhHHHHHH-CCcEEEEEcccCCCC
Q 010654 229 NNYFTERKWASASDGT-QIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFNSSRLSLLD-RGFIFAIAQIRGGGE 305 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~-~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~ 305 (505)
..+..+.+++++.||. .|+++++.|++. .++.|+||++|||+... ....|......|++ .||.|+.+||||+++
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~ 123 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT---AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPE 123 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC---CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTT
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC---CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCC
Confidence 3567889999999997 899999998753 35679999999986322 22335555667777 599999999999886
Q ss_pred CchhHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchh
Q 010654 306 LGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVD 378 (505)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d 378 (505)
.. ....++|+.++++|+.+. ..+|++||+|+|+|+||++++.++.++++ .++++++.+|+++
T Consensus 124 ~~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (323)
T 1lzl_A 124 TT-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELD 192 (323)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCC
T ss_pred CC-----------CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccC
Confidence 42 224578999999999874 23688999999999999999999887665 4899999999877
Q ss_pred hhhhc-----cCCCCCCCccc----cccc-CCCCC----HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHH
Q 010654 379 VLTTM-----LDPTIPLTTAE----WEEW-GDPWK----EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 379 ~~~~~-----~~~~~~~~~~~----~~~~-g~~~~----~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
..... ......+.... +..+ +.+.. ... ....+|+........||+||+||++|..+ .++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~sp~~~~~~~~~~P~li~~G~~D~~~--~~~~ 267 (323)
T 1lzl_A 193 DRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDV---SIYAAPSRATDLTGLPPTYLSTMELDPLR--DEGI 267 (323)
T ss_dssp TTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCC---CTTTCGGGCSCCTTCCCEEEEEETTCTTH--HHHH
T ss_pred CCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCC---CcccCcccCcccCCCChhheEECCcCCch--HHHH
Confidence 53210 00000000000 0001 11100 000 01134543322223356999999999988 5889
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHHhhCCC
Q 010654 445 KFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+++++|+++|+++++++|+ +.+|++.. ......+....+.+||.++++..
T Consensus 268 ~~~~~l~~~g~~~~~~~~~---g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 268 EYALRLLQAGVSVELHSFP---GTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp HHHHHHHHTTCCEEEEEET---TCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHcCCCEEEEEeC---cCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999998 88997531 11223344556899999998654
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=197.64 Aligned_cols=238 Identities=12% Similarity=0.081 Sum_probs=165.7
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
..+.+.+++ +|.++.++++.|+ +.|+||++||+++... .|......|+++||.|+.+|+||.|.+.....
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~-------~~p~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~ 74 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT-------GMPGVLFVHGWGGSQH--HSLVRAREAVGLGCICMTFDLRGHEGYASMRQ 74 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE-------SEEEEEEECCTTCCTT--TTHHHHHHHHTTTCEEECCCCTTSGGGGGGTT
T ss_pred ceeeEEecC-CCeEEEEEEecCC-------CCcEEEEeCCCCCCcC--cHHHHHHHHHHCCCEEEEeecCCCCCCCCCcc
Confidence 456677776 7889999988875 4699999999876533 46666778999999999999999987655321
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCC
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLT 391 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 391 (505)
. .......+|+.++++++.+++.+|+++|+++|+|+||++++.++.++| ++++++.+|.......+........
T Consensus 75 ~----~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~ 148 (290)
T 3ksr_A 75 S----VTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLN 148 (290)
T ss_dssp T----CBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHH
T ss_pred c----ccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccccccc
Confidence 1 122345799999999999998888999999999999999999999887 6777777776542211100000000
Q ss_pred -ccccccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 392 -TAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 392 -~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
...+..+ ...... ...++...+.++++| +|++||+.|..||+.++.++++.++..+ ++++++++ ++|
T Consensus 149 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~P-~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~---~~g 217 (290)
T 3ksr_A 149 ADPDLMDYRRRALAP------GDNLALAACAQYKGD-VLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIA---GAD 217 (290)
T ss_dssp HSTTHHHHTTSCCCG------GGCHHHHHHHHCCSE-EEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEET---TCC
T ss_pred CChhhhhhhhhhhhh------ccccHHHHHHhcCCC-eEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcC---CCC
Confidence 0000001 111110 112333445566776 9999999999999999999999998776 67788888 889
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
|.+... .........+.+||.++++..
T Consensus 218 H~~~~~-~~~~~~~~~i~~fl~~~~~~~ 244 (290)
T 3ksr_A 218 HALSVK-EHQQEYTRALIDWLTEMVVGR 244 (290)
T ss_dssp TTCCSH-HHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcc-hHHHHHHHHHHHHHHHHhcCC
Confidence 976432 122233446799999998543
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.5e-23 Score=192.92 Aligned_cols=244 Identities=15% Similarity=0.126 Sum_probs=158.8
Q ss_pred eEEEEEEEC-CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCCC----
Q 010654 232 FTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGE---- 305 (505)
Q Consensus 232 ~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~---- 305 (505)
..+.+.+.+ .+|..+++.++.|++. ...+++|+||++||+.+...... +....+.+.++|++|+.+|.++.|.
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~-~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~ 92 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGA-SESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPN 92 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTC-BTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCC
T ss_pred eEEEEEEechhcCCceEEEEEcCCCC-CCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCccccccccc
Confidence 445566655 5788999999999987 55678999999999865432210 0112356677899999999765442
Q ss_pred -------CchhHHHcccc-cC-Cc-chHHHHH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 306 -------LGRQWYENGKF-LK-KK-NTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 306 -------~g~~~~~~~~~-~~-~~-~~~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
.|..|...... .+ .. ....++. +.+.++.+...+ ++|++|+|+|+||++++.++.++|++|+++++.+
T Consensus 93 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s 171 (280)
T 3ls2_A 93 EDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFS 171 (280)
T ss_dssp CSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEES
T ss_pred ccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEec
Confidence 12222111000 00 01 1123332 334444444333 5899999999999999999999999999999999
Q ss_pred CchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCC---CCeEEEEccCCCCCCCCCh-HHHHHHH
Q 010654 375 PFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQN---YPHILVTAGLNDPRVMYSE-PAKFVAK 449 (505)
Q Consensus 375 ~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~---~Pp~Li~~G~~D~~vp~~~-~~~~~~~ 449 (505)
|+.+..... .....+ ..+|.. .+. +...+|...+.+++ .+|+|++||+.|..||.+. +++++++
T Consensus 172 ~~~~~~~~~------~~~~~~~~~~g~~--~~~---~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~ 240 (280)
T 3ls2_A 172 PIVNPINCP------WGVKAFTGYLGAD--KTT---WAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAV 240 (280)
T ss_dssp CCSCGGGSH------HHHHHHHHHHCSC--GGG---TGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHH
T ss_pred CccCcccCc------chhhHHHhhcCch--HHH---HHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHH
Confidence 987753211 000001 111211 111 13456666665553 2349999999999999855 9999999
Q ss_pred HHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 450 LREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 450 L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
|+++|+++++.+|+ +.+|.+. .....+...++|+.++|.
T Consensus 241 l~~~g~~~~~~~~~---g~~H~~~----~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 241 AKQKDYPLTLEMQT---GYDHSYF----FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHTCCEEEEEET---TCCSSHH----HHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCceEEEeC---CCCCchh----hHHHHHHHHHHHHHHHhc
Confidence 99999999999998 8899642 112234457899999875
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=211.08 Aligned_cols=239 Identities=14% Similarity=0.091 Sum_probs=166.0
Q ss_pred ECCCCce--eeEEEEEeCCccCCCCCCcEEEEEcC--CCCcC------------------C-------------------
Q 010654 239 SASDGTQ--IPICIVYRKNLVKLDGSDPLLLYGYG--SYEIC------------------N------------------- 277 (505)
Q Consensus 239 ~s~dG~~--i~~~l~~p~~~~~~~~~~P~iv~~hG--g~~~~------------------~------------------- 277 (505)
+..||.+ |.+.+++|++. +++|+||..|+ +.+.. .
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~----~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 254 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST----EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE 254 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS----SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCCC----CcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence 4689999 99999999864 68999997654 22110 0
Q ss_pred -------CCCCc-----hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---------
Q 010654 278 -------DPAFN-----SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--------- 336 (505)
Q Consensus 278 -------~~~~~-----~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------- 336 (505)
...|. ...+.|+++||+|+.+|+||+|+++..+ ......+.+|+.++++||..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~-----~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~ 329 (763)
T 1lns_A 255 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQ-----TSGDYQQIYSMTAVIDWLNGRARAYTSRKK 329 (763)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCC-----CTTSHHHHHHHHHHHHHHTTSSCEESSTTC
T ss_pred ccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcC-----CCCCHHHHHHHHHHHHHHhhcccccccccc
Confidence 01121 1247899999999999999999876542 123336789999999999853
Q ss_pred ------CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCC---CCCCccc----------ccc
Q 010654 337 ------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT---IPLTTAE----------WEE 397 (505)
Q Consensus 337 ------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~---~~~~~~~----------~~~ 397 (505)
++ +.+||+++|+||||++++.+|+++|+.++|+|+.+|+.|+...+.... .+..... +..
T Consensus 330 ~~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~ 408 (763)
T 1lns_A 330 THEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSR 408 (763)
T ss_dssp CCEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGG
T ss_pred cccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhh
Confidence 33 357999999999999999999999999999999999987665432211 0000000 000
Q ss_pred c--------------------------CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 398 W--------------------------GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 398 ~--------------------------g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
+ ..+... ..+...+|..++.++++| +|++||..|.+||+.++.+++++|+
T Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~w~~~s~~~~l~~I~~P-vLii~G~~D~~vp~~~a~~l~~al~ 484 (763)
T 1lns_A 409 NLDGADFLKGNAEYEKRLAEMTAALDRKSGDYN---QFWHDRNYLINTDKVKAD-VLIVHGLQDWNVTPEQAYNFWKALP 484 (763)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCC---HHHHTTBGGGGGGGCCSE-EEEEEETTCCSSCTHHHHHHHHHSC
T ss_pred hcCcchhhhHHHHHHHHHHHHHhhhhhccCchh---HHhhccChhhHhhcCCCC-EEEEEECCCCCCChHHHHHHHHhhc
Confidence 0 001000 123456788889999997 9999999999999999999999998
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
. +++..++ ++ ++||....+. ........+.+||+++|+..
T Consensus 485 ~-~~~~~l~-i~---~~gH~~~~~~-~~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 485 E-GHAKHAF-LH---RGAHIYMNSW-QSIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp T-TCCEEEE-EE---SCSSCCCTTB-SSCCHHHHHHHHHHHHHTTC
T ss_pred c-CCCeEEE-Ee---CCcccCcccc-chHHHHHHHHHHHHHHhcCC
Confidence 7 6666544 44 5689753221 11112345899999999754
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=195.52 Aligned_cols=240 Identities=16% Similarity=0.138 Sum_probs=156.4
Q ss_pred EEEEEEE-CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcc--cCCCCC
Q 010654 233 TERKWAS-ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQI--RGGGEL 306 (505)
Q Consensus 233 ~~~~~~~-s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~--rG~~~~ 306 (505)
.+.+.+. ..+|..+++.++.|++. . .+++|+||++||+.+.... |.. ..+.++++||+|+.+|+ ||.++.
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~ 91 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKA-E-TGKCPALYWLSGLTCTEQN--FISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGG-G-TSCEEEEEEECCTTCCSHH--HHHHSCCHHHHHHHTCEEEEECSCSSCCCC-
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCC-C-CCCCCEEEEEcCCCCCccc--hhhcchHHHHhhcCCeEEEEeccccCccccc
Confidence 3444444 45788999999999875 3 3679999999998765432 221 13677889999999999 888876
Q ss_pred chhHHH-cc-----cccCCc-------chHHHHH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 307 GRQWYE-NG-----KFLKKK-------NTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 307 g~~~~~-~~-----~~~~~~-------~~~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
|..... .+ ...... ....++. ++++++.++..+|++||+|+|+|+||++++.++.++|++|+++++
T Consensus 92 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 171 (282)
T 3fcx_A 92 GEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSA 171 (282)
T ss_dssp -------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEE
T ss_pred cccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEE
Confidence 543100 00 001110 2233344 444555545458899999999999999999999999999999999
Q ss_pred cCCchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCC---CCCeEEEEccCCCCCCCCCh--HHHH
Q 010654 373 AVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQ---NYPHILVTAGLNDPRVMYSE--PAKF 446 (505)
Q Consensus 373 ~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~---~~Pp~Li~~G~~D~~vp~~~--~~~~ 446 (505)
.+|+.+..... .....+ ..++.. ... +...+|...+.++ +.| +|++||+.|..||..+ ++++
T Consensus 172 ~s~~~~~~~~~------~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~p-~li~~G~~D~~v~~~~~~~~~~ 239 (282)
T 3fcx_A 172 FAPICNPVLCP------WGKKAFSGYLGTD--QSK---WKAYDATHLVKSYPGSQLD-ILIDQGKDDQFLLDGQLLPDNF 239 (282)
T ss_dssp ESCCCCGGGSH------HHHHHHHHHHC-----CC---GGGGCHHHHHTTCC---CC-EEEEEETTCHHHHTTSSCHHHH
T ss_pred eCCccCcccCc------hhHHHHHHhcCCc--hhh---hhhcCHHHHHHhcccCCCc-EEEEcCCCCcccccchhhHHHH
Confidence 99987743210 000001 011221 000 1234555444443 565 9999999999997766 6699
Q ss_pred HHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 447 VAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 447 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+++|+++|+++++.+|+ +.+|.+. .....+...+.|+.++|.
T Consensus 240 ~~~l~~~g~~~~~~~~~---g~~H~~~----~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 240 IAACTEKKIPVVFRLQE---DYDHSYY----FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHTTCCEEEEEET---TCCSSHH----HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCceEEEECC---CCCcCHH----HHHhhhHHHHHHHHHhhc
Confidence 99999999999999998 8899642 112234457889988875
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=198.91 Aligned_cols=246 Identities=16% Similarity=0.152 Sum_probs=168.0
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCCCch
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
.+..+.+.+.+.||..+.++++.|++. +.++.|+||++||+.+... .|.. ....|+++||.|+.+|+||.|....
T Consensus 65 ~~~~~~~~~~~~~g~~~~~~~~~p~~~--~~~~~p~vv~~hG~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 65 KVEHRKVTFANRYGITLAADLYLPKNR--GGDRLPAIVIGGPFGAVKE--QSSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEESSC--CSSCEEEEEEECCTTCCTT--SHHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CceeEEEEEecCCCCEEEEEEEeCCCC--CCCCCCEEEEECCCCCcch--hhHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 457788999999999999999999762 2467899999999875432 2332 4578899999999999999886543
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC---
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD--- 385 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~--- 385 (505)
... ........++|+.++++++.++..+|++|++++|+|+||.+++.++.++| .++++|+.+|+.. ......
T Consensus 141 ~~~---~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~-~~~~~~~~~ 215 (367)
T 2hdw_A 141 QPR---NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDM-TRVMSKGYN 215 (367)
T ss_dssp SSS---SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCH-HHHHHHTTT
T ss_pred cCc---cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccc-cHHHhhhhc
Confidence 221 01112357899999999999998888999999999999999999999988 5899998887632 110000
Q ss_pred C-------------------------------CCC---CCcc----c-cccc----C-CC--------CCHHHHHHHHhC
Q 010654 386 P-------------------------------TIP---LTTA----E-WEEW----G-DP--------WKEEFYFYMKSY 413 (505)
Q Consensus 386 ~-------------------------------~~~---~~~~----~-~~~~----g-~~--------~~~~~~~~~~~~ 413 (505)
. ..+ .... . +..+ + .| ........+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (367)
T 2hdw_A 216 DSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNM 295 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTS
T ss_pred cccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCC
Confidence 0 000 0000 0 0000 0 00 000112234456
Q ss_pred ChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 414 SPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 414 sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+|...+.+++ +| +|++||++|. |+.++++++++ .+.++++++++ +.||......+... ....+.+||.+
T Consensus 296 ~~~~~~~~i~~~P-vLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~---g~gH~~~~~~~~~~-~~~~i~~fl~~ 365 (367)
T 2hdw_A 296 PILTYIKEISPRP-ILLIHGERAH--SRYFSETAYAA---AAEPKELLIVP---GASHVDLYDRLDRI-PFDRIAGFFDE 365 (367)
T ss_dssp CSCTTGGGGTTSC-EEEEEETTCT--THHHHHHHHHH---SCSSEEEEEET---TCCTTHHHHCTTTS-CHHHHHHHHHH
T ss_pred ChhHhHHhhcCCc-eEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeC---CCCeeeeecCchhH-HHHHHHHHHHh
Confidence 7778888888 87 9999999998 77777777765 56778888898 88996321111111 23357899988
Q ss_pred hh
Q 010654 493 AL 494 (505)
Q Consensus 493 ~l 494 (505)
+|
T Consensus 366 ~l 367 (367)
T 2hdw_A 366 HL 367 (367)
T ss_dssp HC
T ss_pred hC
Confidence 75
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=201.18 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=165.0
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchh-HHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS-RLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
..+.+.++. +|..++++++ |++. ++.|+||++||+.+.... |... ...++++||.|+.+|+||.|......
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~-~~~~----~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~ 205 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAI-ISED----KAQDTLIVVGGGDTSRED--LFYMLGYSGWEHDYNVLMVDLPGQGKNPNQG 205 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEE-CCSS----SCCCEEEEECCSSCCHHH--HHHHTHHHHHHTTCEEEEECCTTSTTGGGGT
T ss_pred CcEEEEEeE-CCeEEEEEEE-cCCC----CCCCEEEEECCCCCCHHH--HHHHHHHHHHhCCcEEEEEcCCCCcCCCCCC
Confidence 456677776 6788998855 4432 456999999997543221 2222 23567899999999999998763221
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc---CCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPT 387 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~ 387 (505)
.........|+.++++++..++ ++|+|+|+|+||++++.++.++| +++++|+.+|+.++..... ...
T Consensus 206 -----~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~ 275 (405)
T 3fnb_A 206 -----LHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTA 275 (405)
T ss_dssp -----CCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC--
T ss_pred -----CCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhh
Confidence 1223355789999999987765 78999999999999999999988 8999999999988654331 000
Q ss_pred --CCCCc-cccc-------------------ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 388 --IPLTT-AEWE-------------------EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 388 --~~~~~-~~~~-------------------~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
.+... ..+. .++..........+...++...+.++++| +|++||++|..||+.++.+
T Consensus 276 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~v~~~~~~~ 354 (405)
T 3fnb_A 276 LKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVP-SLFLVGAGEDSELMRQSQV 354 (405)
T ss_dssp ----------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSC-EEEEEETTSCHHHHHHHHH
T ss_pred hhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCC-EEEEecCCCcCCChHHHHH
Confidence 00000 0000 01111111112222333444446778887 9999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
++++|+..+.++++++|+...++||....+.... ....+.+||.++|+.
T Consensus 355 l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~--~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 355 LYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRL--MHYQVFEWLNHIFKK 403 (405)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHH--HHHHHHHHHHHHHC-
T ss_pred HHHHhccCCCCceEEEEcCCccchhccccchHHH--HHHHHHHHHHHHhCc
Confidence 9999999999999999985545556554333333 334689999999974
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.8e-22 Score=177.50 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=141.0
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC---CcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~---~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+.+.+.+.|| +++++++.|++. ++.|+||++||++ +......|......|+++||.|+.+|+||.|.....
T Consensus 6 ~~~~~~~~~~g-~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 6 NEDFLIQGPVG-QLEVMITRPKGI----EKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp SSCEEEECSSS-EEEEEEECCSSC----CCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred cceEEEECCCc-eEEEEEEcCCCC----CCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 46678899999 999987766542 4689999999964 222222244456788899999999999998876443
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 389 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 389 (505)
+ .......+|+.++++++.++ .+.++++++|+|+||.+++.++ .+| +++++|+.+|..+...
T Consensus 81 ~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~-------- 142 (208)
T 3trd_A 81 Y------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEG-------- 142 (208)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGG--------
T ss_pred c------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCC--------
Confidence 2 22345689999999999987 3458999999999999999999 567 8899998888652110
Q ss_pred CCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 390 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 390 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
...+..+++| +|++||++|..+|+.+++++++++... +++++++ ++|
T Consensus 143 --------------------------~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~ 189 (208)
T 3trd_A 143 --------------------------FASLTQMASP-WLIVQGDQDEVVPFEQVKAFVNQISSP---VEFVVMS---GAS 189 (208)
T ss_dssp --------------------------GTTCCSCCSC-EEEEEETTCSSSCHHHHHHHHHHSSSC---CEEEEET---TCC
T ss_pred --------------------------chhhhhcCCC-EEEEECCCCCCCCHHHHHHHHHHccCc---eEEEEeC---CCC
Confidence 0112233566 999999999999999988888776543 6788887 889
Q ss_pred CCCCCC
Q 010654 470 HFSKSG 475 (505)
Q Consensus 470 H~~~~~ 475 (505)
|.+...
T Consensus 190 H~~~~~ 195 (208)
T 3trd_A 190 HFFHGR 195 (208)
T ss_dssp SSCTTC
T ss_pred Cccccc
Confidence 987654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=189.56 Aligned_cols=236 Identities=15% Similarity=0.095 Sum_probs=155.7
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCCchhHHHHHHC-CcEEEEEcccCCCCCc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAFNSSRLSLLDR-GFIFAIAQIRGGGELG 307 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g 307 (505)
....+.+.+ +|..+ ++|++. ..+.|+||++|||..... ...|......|+++ ||+|+.+|||++++..
T Consensus 57 ~~~~~~~~~---~g~~~----~~p~~~---~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 126 (322)
T 3k6k_A 57 GVELTLTDL---GGVPC----IRQATD---GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP 126 (322)
T ss_dssp TCEEEEEEE---TTEEE----EEEECT---TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC
T ss_pred CceEEEEEE---CCEeE----EecCCC---CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC
Confidence 445555554 66544 567653 233455999999863222 22244445667764 9999999999887542
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc----eeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL----FKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~ 383 (505)
....++|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++|+.+|++|+....
T Consensus 127 -----------~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 194 (322)
T 3k6k_A 127 -----------FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR 194 (322)
T ss_dssp -----------TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS
T ss_pred -----------CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc
Confidence 235679999999999988 46899999999999999999999887765 89999999988753210
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHH------------HhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYM------------KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
.. . ................++ ...+|+....+ ..||+||+||++|..+ .++.+++++|+
T Consensus 195 ~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-~~pP~li~~G~~D~~~--~~~~~~~~~l~ 265 (322)
T 3k6k_A 195 WS--N----SNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLS-GLPEMLIHVGSEEALL--SDSTTLAERAG 265 (322)
T ss_dssp HH--H----HHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCT-TCCCEEEEEESSCTTH--HHHHHHHHHHH
T ss_pred cc--h----hhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCccccccc-CCCcEEEEECCcCccH--HHHHHHHHHHH
Confidence 00 0 000000000011111000 12356544333 3456999999999885 68999999999
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCC---hHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSG---RFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
++|+++++++|+ +.+|.+... .....+....+.+||.++|+....
T Consensus 266 ~~g~~~~l~~~~---g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 313 (322)
T 3k6k_A 266 AAGVSVELKIWP---DMPHVFQMYGKFVNAADISIKEICHWISARISKLAA 313 (322)
T ss_dssp HTTCCEEEEEET---TCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC----
T ss_pred HCCCCEEEEEEC---CCccccccccccChHHHHHHHHHHHHHHHHHhccch
Confidence 999999999998 889975321 123344556789999999976543
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-21 Score=190.30 Aligned_cols=242 Identities=16% Similarity=0.127 Sum_probs=164.9
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-C--CCchhHHHHHHCCcEEEEEcccCCCCC
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-P--AFNSSRLSLLDRGFIFAIAQIRGGGEL 306 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~--~~~~~~~~l~~~G~~v~~~d~rG~~~~ 306 (505)
.+..+.+.+.+.+|..+.+.++.|.+. .++.|+||++|||...... . .|......|+++||+|+.+||||++++
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~---~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~ 155 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGV---EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTA 155 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC---CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEET
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCC---CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCC
Confidence 456778888889998899999999764 2368999999998632222 2 344456788889999999999999754
Q ss_pred chhHHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhh-----CCCceeEEEecCCchh
Q 010654 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNM-----RPDLFKAAVAAVPFVD 378 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~-----~p~~~~a~v~~~~~~d 378 (505)
.. .......+.|+.++++|+.++. .+| +|+|+|+|+||.+++.++.. +|++++++|+.+|+.+
T Consensus 156 ~~-------~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~ 226 (361)
T 1jkm_A 156 EG-------HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 226 (361)
T ss_dssp TE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred CC-------CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccc
Confidence 21 1234467899999999998762 233 99999999999999999988 7889999999999887
Q ss_pred h---------hhhc---cC-CCCCCCccc----cccc-CCCCCHHHHHHHHhCChh----hcccCCCCCeEEEEccCCCC
Q 010654 379 V---------LTTM---LD-PTIPLTTAE----WEEW-GDPWKEEFYFYMKSYSPV----DNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 379 ~---------~~~~---~~-~~~~~~~~~----~~~~-g~~~~~~~~~~~~~~sp~----~~~~~~~~Pp~Li~~G~~D~ 436 (505)
. .... .. ....+.... +..+ +....... ...+|+ ..+.++. |+||+||++|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~l~~l~--P~Lii~G~~D~ 300 (361)
T 1jkm_A 227 GGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAED----PIAWPYFASEDELRGLP--PFVVAVNELDP 300 (361)
T ss_dssp CCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTC----TTTCGGGCCHHHHTTCC--CEEEEEETTCT
T ss_pred cccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCC----cccCccccChhhHcCCC--ceEEEEcCcCc
Confidence 5 1100 00 000000000 0001 00000000 013444 1233433 49999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC-CC---hHHH-HHHHHHHHHHHHHhh
Q 010654 437 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK-SG---RFER-LREAAFTYTFLMRAL 494 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~-~~---~~~~-~~~~~~~~~fl~~~l 494 (505)
.++ ++.+++++|+++|+++++++|+ +++|.+. .. .... .+....+.+||.++.
T Consensus 301 ~~~--~~~~~~~~l~~~g~~~~l~~~~---g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 301 LRD--EGIAFARRLARAGVDVAARVNI---GLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp THH--HHHHHHHHHHHTTCCEEEEEET---TCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred chh--hHHHHHHHHHHcCCCEEEEEeC---CCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 998 8999999999999999999998 8899754 11 1222 333456889998764
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=187.52 Aligned_cols=241 Identities=18% Similarity=0.148 Sum_probs=164.7
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc-CCCCCCchhHHHHHHC-CcEEEEEcccCCCCCc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI-CNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELG 307 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~-~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g 307 (505)
....+.+++++.+| .|++.+++|++. ++.|+||++|||... .....|......|+++ ||.|+.+|+||++++.
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~ 119 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKKA----AGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK 119 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSSC----SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC
T ss_pred cceEEEEEecCCCC-cEEEEEEecCCC----CCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC
Confidence 45788889999888 899998888753 357999999998622 1223355556778876 9999999999988642
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhh
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVL 380 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~ 380 (505)
. ....+|+.++++|+.+.. .+|++|++|+|+|+||++++.++.++|+ +++++++.+|++++.
T Consensus 120 ~-----------~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 188 (311)
T 2c7b_A 120 F-----------PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMT 188 (311)
T ss_dssp T-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCS
T ss_pred C-----------CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCc
Confidence 2 245789999999998762 3688999999999999999999987765 589999999988731
Q ss_pred hhc--------cCCCCCCCccc--c--ccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHH
Q 010654 381 TTM--------LDPTIPLTTAE--W--EEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFV 447 (505)
Q Consensus 381 ~~~--------~~~~~~~~~~~--~--~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~ 447 (505)
... ......+.... + ..+ +.+..... ...+|+...-+ ..||+|++||++|+.++ ++..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~l~-~~~P~lii~G~~D~~~~--~~~~~~ 261 (311)
T 2c7b_A 189 GVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYD----FKASPLLADLG-GLPPALVVTAEYDPLRD--EGELYA 261 (311)
T ss_dssp SCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGS----TTTCGGGSCCT-TCCCEEEEEETTCTTHH--HHHHHH
T ss_pred cccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccC----cccCccccccc-CCCcceEEEcCCCCchH--HHHHHH
Confidence 100 00000000000 0 011 11111000 12345433111 23459999999999985 778899
Q ss_pred HHHHhcCCCCCeEEEEecCCCCCCCCC---ChHHHHHHHHHHHHHHHHhhCC
Q 010654 448 AKLREMKTDDNILLFKCELGAGHFSKS---GRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 448 ~~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
++|+..+.++++++|+ +.+|++.. ......+....+.+||.++++.
T Consensus 262 ~~l~~~g~~~~~~~~~---g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (311)
T 2c7b_A 262 YKMKASGSRAVAVRFA---GMVHGFVSFYPFVDAGREALDLAAASIRSGLQP 310 (311)
T ss_dssp HHHHHTTCCEEEEEET---TCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHCCCCEEEEEeC---CCccccccccccCHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999998 88997631 1123334455689999998853
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=190.58 Aligned_cols=242 Identities=14% Similarity=0.128 Sum_probs=160.4
Q ss_pred eEEEEEEEC-CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCC-
Q 010654 232 FTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGEL- 306 (505)
Q Consensus 232 ~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~- 306 (505)
..+.+++.+ .+|..+++.++.|++. ...+++|+||++||+.+.... |.. ..+.+.++|++|+.+|.++.|..
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~-~~~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~ 92 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQA-STGAKVPVLYWLSGLTCSDEN--FMQKAGAQRLAAELGIAIVAPDTSPRGEGV 92 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGG-GTTCCEEEEEEECCTTCCSSH--HHHHSCCHHHHHHHTCEEEEECSSCCSTTC
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCC-CCCCCccEEEEecCCCCChhH--HhhcccHHHHHhhCCeEEEEeCCccccccc
Confidence 455566654 5788999999999987 556789999999998765432 222 23566678999999998765431
Q ss_pred ----------chhHHHcc-cccC--CcchHHHHH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 307 ----------GRQWYENG-KFLK--KKNTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 307 ----------g~~~~~~~-~~~~--~~~~~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
|..|.... ...+ .......+. +.+.++.+...+ ++|++|+|+|+||++++.++.++|++|+++++
T Consensus 93 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 171 (280)
T 3i6y_A 93 ADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSA 171 (280)
T ss_dssp CCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEE
T ss_pred CcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEE
Confidence 11111000 0000 001123332 444555454334 68999999999999999999999999999999
Q ss_pred cCCchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCCh-HHHHHHH
Q 010654 373 AVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSE-PAKFVAK 449 (505)
Q Consensus 373 ~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~-~~~~~~~ 449 (505)
.+|+.+..... .....+ ..++.. ...+ ...+|...+.+++ .+|+|++||+.|..+|... +++++++
T Consensus 172 ~s~~~~~~~~~------~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 240 (280)
T 3i6y_A 172 FSPINNPVNCP------WGQKAFTAYLGKD--TDTW---REYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAA 240 (280)
T ss_dssp ESCCCCGGGSH------HHHHHHHHHHCSC--GGGT---GGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHH
T ss_pred eCCccccccCc------hHHHHHHHhcCCc--hHHH---HhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHH
Confidence 99987743210 000001 111221 1111 3456666666654 2349999999999998755 8999999
Q ss_pred HHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 450 LREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 450 L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
|+++|+++++++|+ +++|.+. .........++|+.++|+
T Consensus 241 l~~~g~~~~~~~~~---g~~H~~~----~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 241 ASSNNYPLELRSHE---GYDHSYY----FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHTTCCEEEEEET---TCCSSHH----HHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCceEEEeC---CCCccHH----HHHHhHHHHHHHHHhhcc
Confidence 99999999999998 8899642 122334567899999885
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=181.79 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=165.2
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
..+.+.+. .||.+|.++++.|++ .+.|+||++||+++......|......|+++||.|+.+|+||.|.......
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 94 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG-----EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFE 94 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS-----SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG
T ss_pred cceEEEec-cCCEEEEEEEEcCCC-----CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCC
Confidence 34444454 589999999777653 347999999998766433335556678899999999999999987654321
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCC---
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI--- 388 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~--- 388 (505)
. .......+|+.++++++.++... ++++++|+|+||++++.++.++|++++++|+.+|..+..........
T Consensus 95 ~----~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 168 (270)
T 3pfb_A 95 N----MTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGV 168 (270)
T ss_dssp G----CCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTE
T ss_pred c----cCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhcc
Confidence 1 11224578999999999876433 59999999999999999999999999999999998765432111000
Q ss_pred ---CCCccccccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 389 ---PLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 389 ---~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
+........+ ...........+...++...+.++++| +|+++|+.|..+|+..+.++++.+. ..++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~- 242 (270)
T 3pfb_A 169 TYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKP-VCLIHGTDDTVVSPNASKKYDQIYQ----NSTLHLIE- 242 (270)
T ss_dssp ECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSC-EEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEET-
T ss_pred ccCcccccccccccccccchhHhhcccccCHHHHHhhCCcc-EEEEEcCCCCCCCHHHHHHHHHhCC----CCeEEEcC-
Confidence 0000000001 111123344455667777888888998 9999999999999999888877753 45777887
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 465 ELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 465 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++||......+.. ....+.+||.++
T Consensus 243 --~~gH~~~~~~~~~--~~~~i~~fl~~~ 267 (270)
T 3pfb_A 243 --GADHCFSDSYQKN--AVNLTTDFLQNN 267 (270)
T ss_dssp --TCCTTCCTHHHHH--HHHHHHHHHC--
T ss_pred --CCCcccCccchHH--HHHHHHHHHhhc
Confidence 8899875333332 233577888764
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=190.27 Aligned_cols=242 Identities=12% Similarity=0.133 Sum_probs=161.2
Q ss_pred eEEEEEEE-CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCCc
Q 010654 232 FTERKWAS-ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 232 ~~~~~~~~-s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
..+.+.+. ..+|..+++.++.|++. . .+++|+||++||+.+.... |.. ....+.+.||+|+.+|+||.|...
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~-~-~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~ 89 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKA-I-HEPCPVVWYLSGLTCTHAN--VMEKGEYRRMASELGLVVVCPDTSPRGNDV 89 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGG-G-TSCEEEEEEECCTTCCSHH--HHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred cEEEEEEeccccCCcceEEEEcCCCC-C-CCCCCEEEEEcCCCCCccc--hhhcccHHHHHhhCCeEEEecCCcccCccc
Confidence 44555554 45788999999999875 3 5779999999998765432 222 223455569999999999887542
Q ss_pred hh----H--------HHcccc-c-CCc-chHHHHH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEE
Q 010654 308 RQ----W--------YENGKF-L-KKK-NTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 371 (505)
Q Consensus 308 ~~----~--------~~~~~~-~-~~~-~~~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v 371 (505)
.. | ...... . ... .....+. ++++++.+...+|++|++|+|+|+||++++.++.++|++|++++
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 169 (278)
T 3e4d_A 90 PDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCS 169 (278)
T ss_dssp CCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEE
T ss_pred ccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEE
Confidence 21 1 100000 0 011 1122332 36667776656788999999999999999999999999999999
Q ss_pred ecCCchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCCh-HHHHHH
Q 010654 372 AAVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSE-PAKFVA 448 (505)
Q Consensus 372 ~~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~-~~~~~~ 448 (505)
+.+|+.+.... +.....+ ..++.. ...+ ...+|...+.+++ .||+|++||+.|..+|... +.++++
T Consensus 170 ~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 238 (278)
T 3e4d_A 170 AFAPIVAPSSA------DWSEPALEKYLGAD--RAAW---RRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEE 238 (278)
T ss_dssp EESCCSCGGGC------TTTHHHHHHHHCSC--GGGG---GGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHH
T ss_pred EeCCcccccCC------ccchhhHHHhcCCc--HHHH---HhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHH
Confidence 99998875421 1111111 112221 1111 3456665555553 3469999999999998522 799999
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+|+++|+++++.+|+ +++|.+. .........+.|+.++|+
T Consensus 239 ~l~~~g~~~~~~~~~---g~~H~~~----~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 239 AIKGTDIGLTLRMHD---RYDHSYY----FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp HHTTSSCEEEEEEET---TCCSSHH----HHHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCceEEEeC---CCCcCHH----HHHHHHHHHHHHHHHhcC
Confidence 999999999999998 7899642 111234457889998875
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=191.35 Aligned_cols=209 Identities=18% Similarity=0.210 Sum_probs=151.8
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
...+.|. +..+.+.+++|++. .++.|+||++|||+... ....+......|+++||+|+.+||||+++...
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~---~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~--- 128 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT---TNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL--- 128 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC---CTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCH---
T ss_pred eeeeccC---CCCcEEEEEecCCC---CCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCCh---
Confidence 3444444 44456677778643 46789999999986432 22335556688999999999999999876432
Q ss_pred HcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCC-------CceeEEEecCCchhhhhhc
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRP-------DLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p-------~~~~a~v~~~~~~d~~~~~ 383 (505)
...+.|+.++++|+.+. ...+++||+|+|+|+||++++.++.+.. ++++++|+.+|++|+....
T Consensus 129 --------~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~ 200 (303)
T 4e15_A 129 --------EQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS 200 (303)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH
T ss_pred --------hHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh
Confidence 14578999999999873 2345789999999999999999987543 3799999999999876543
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChh-hcccCC----CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCC
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPV-DNVKAQ----NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 458 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~-~~~~~~----~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~ 458 (505)
..... . .. ..++.. ++. +...+|+ ..+..+ +.| +|++||++|..||+.++.+++++|+++|.+++
T Consensus 201 ~~~~~-~-~~--~~~~~~--~~~---~~~~sp~~~~~~~~~~~~~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 270 (303)
T 4e15_A 201 NLESV-N-PK--NILGLN--ERN---IESVSPMLWEYTDVTVWNSTK-IYVVAAEHDSTTFIEQSRHYADVLRKKGYKAS 270 (303)
T ss_dssp TCTTT-S-GG--GTTCCC--TTT---TTTTCGGGCCCCCGGGGTTSE-EEEEEEEESCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ccccc-c-hh--hhhcCC--HHH---HHHcCchhhcccccccCCCCC-EEEEEeCCCCCCchHHHHHHHHHHHHCCCceE
Confidence 21000 0 00 112221 111 1456787 556554 565 99999999999999999999999999999999
Q ss_pred eEEEEecCCCCCC
Q 010654 459 ILLFKCELGAGHF 471 (505)
Q Consensus 459 ~~~~~~~~~~gH~ 471 (505)
+++++ +.+|.
T Consensus 271 ~~~~~---g~~H~ 280 (303)
T 4e15_A 271 FTLFK---GYDHF 280 (303)
T ss_dssp EEEEE---EEETT
T ss_pred EEEeC---CCCch
Confidence 99999 77994
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=179.37 Aligned_cols=206 Identities=18% Similarity=0.184 Sum_probs=154.1
Q ss_pred CceEEEEEEECC--CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 230 NYFTERKWASAS--DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 230 ~~~~~~~~~~s~--dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
.+..+.+.+++. +|. ..+.+++|... ..++.|+||++||..+... .|......|+++||.|+.+|+||.+...
T Consensus 22 ~~~~~~~~~~~~~~~~~-~~~~l~~p~~~--~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 96 (262)
T 1jfr_A 22 PYATSQTSVSSLVASGF-GGGTIYYPTST--ADGTFGAVVISPGFTAYQS--SIAWLGPRLASQGFVVFTIDTNTTLDQP 96 (262)
T ss_dssp SSCEEEEEECTTTCSSS-CCEEEEEESCC--TTCCEEEEEEECCTTCCGG--GTTTHHHHHHTTTCEEEEECCSSTTCCH
T ss_pred CCCccceEecceeccCC-CceeEEecCCC--CCCCCCEEEEeCCcCCCch--hHHHHHHHHHhCCCEEEEeCCCCCCCCC
Confidence 455666666665 443 24677888753 2467899999999865543 3555677889999999999999987653
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIK----NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
. ....|+.++++++.+ ...++.++++++|+|+||++++.++.++|+ ++++|+.+|...
T Consensus 97 ~------------~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~----- 158 (262)
T 1jfr_A 97 D------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT----- 158 (262)
T ss_dssp H------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----
T ss_pred c------------hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-----
Confidence 3 234688889999988 445677899999999999999999999987 788888776321
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCCh-HHHHHHHHHhcCCCCCeEEE
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~-~~~~~~~L~~~~~~~~~~~~ 462 (505)
...+.+++.| +|++||++|..+|+.+ +.++++.++. +.+++++++
T Consensus 159 --------------------------------~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 204 (262)
T 1jfr_A 159 --------------------------------DKTWPELRTP-TLVVGADGDTVAPVATHSKPFYESLPG-SLDKAYLEL 204 (262)
T ss_dssp --------------------------------CCCCTTCCSC-EEEEEETTCSSSCTTTTHHHHHHHSCT-TSCEEEEEE
T ss_pred --------------------------------cccccccCCC-EEEEecCccccCCchhhHHHHHHHhhc-CCCceEEEe
Confidence 1123344666 9999999999999998 9999999853 556788888
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 463 KCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+ +.||......... ....+.+||.++++..
T Consensus 205 ~---~~~H~~~~~~~~~--~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 205 R---GASHFTPNTSDTT--IAKYSISWLKRFIDSD 234 (262)
T ss_dssp T---TCCTTGGGSCCHH--HHHHHHHHHHHHHSCC
T ss_pred C---CCCcCCcccchHH--HHHHHHHHHHHHhcCc
Confidence 7 8899764433332 2346899999998754
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-20 Score=176.93 Aligned_cols=216 Identities=14% Similarity=0.038 Sum_probs=150.8
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC-----chhHHHHHHC----CcEEEEEccc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-----NSSRLSLLDR----GFIFAIAQIR 301 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~-----~~~~~~l~~~----G~~v~~~d~r 301 (505)
..+.+.+.+. +|..+.+.++.|++. ...+++|+||++||+.+....+.. ......|+++ ||+|+.+|+|
T Consensus 31 ~~~~~~~~s~~~~~~~~~~v~~P~~~-~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~ 109 (268)
T 1jjf_A 31 QVVNISYFSTATNSTRPARVYLPPGY-SKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTN 109 (268)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTC-CTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCC
T ss_pred eEEEEEEeccccCCceEEEEEeCCCC-CCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCC
Confidence 5667777654 678899999999986 556789999999998765432211 1124567776 5999999999
Q ss_pred CCCCC-chhHHHcccccCCcchHHH-HHHHHHHHHHcCCC--CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 302 GGGEL-GRQWYENGKFLKKKNTFTD-FIACAEYLIKNCYC--TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 302 G~~~~-g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
+.+.. ...|. ...++ +.++++++.++..+ |++|++|+|+|+||++++.++.++|++|+++++.+|..
T Consensus 110 ~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 110 AAGPGIADGYE---------NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp CCCTTCSCHHH---------HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCccccccHH---------HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 86532 11111 11233 34566677655434 88999999999999999999999999999999999976
Q ss_pred hhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 378 DVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 378 d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
++.... ..+.... .. ...+.||+|++||+.|..+| .+++++++|+++|+++
T Consensus 181 ~~~~~~------------~~~~~~~-~~--------------~~~~~pp~li~~G~~D~~v~--~~~~~~~~l~~~g~~~ 231 (268)
T 1jjf_A 181 NTYPNE------------RLFPDGG-KA--------------AREKLKLLFIACGTNDSLIG--FGQRVHEYCVANNINH 231 (268)
T ss_dssp TSCCHH------------HHCTTTT-HH--------------HHHHCSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCC
T ss_pred CCCchh------------hhcCcch-hh--------------hhhcCceEEEEecCCCCCcc--HHHHHHHHHHHCCCce
Confidence 532100 0011110 00 01134569999999999998 4888999999999999
Q ss_pred CeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 458 NILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++.+|+ +++|.+. .....+...+.||.++
T Consensus 232 ~~~~~~---g~~H~~~----~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 232 VYWLIQ---GGGHDFN----VWKPGLWNFLQMADEA 260 (268)
T ss_dssp EEEEET---TCCSSHH----HHHHHHHHHHHHHHHH
T ss_pred EEEEcC---CCCcCHh----HHHHHHHHHHHHHHhc
Confidence 999998 8899752 1123345578899876
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=174.15 Aligned_cols=207 Identities=13% Similarity=0.057 Sum_probs=153.2
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc---CCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI---CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~---~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+.+.+++.|| .+.++++.|++. . .++.|+||++||++.. .....|......|+++||.|+.+|+||.|....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~-~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 85 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPD-V-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 85 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTT-S-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCC-C-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCC
Confidence 457788899999 899998887642 1 1458999999996421 122223445578888999999999999887644
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCC
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
.+ .......+|+.++++++.++. +.++++++|+|+||.+++.++.++ .++++|+.+|..+...
T Consensus 86 ~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------- 148 (220)
T 2fuk_A 86 SF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------- 148 (220)
T ss_dssp CC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------
T ss_pred Cc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-------
Confidence 32 223457899999999999874 667999999999999999999876 7899999988765321
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
+.. +. ...| +|++||++|..+|+.++.+++++++ .++++++++ ++
T Consensus 149 ------------------------~~~---~~-~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~---~~ 193 (220)
T 2fuk_A 149 ------------------------FSD---VQ-PPAQ-WLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMP---DT 193 (220)
T ss_dssp ------------------------CTT---CC-CCSS-EEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEET---TC
T ss_pred ------------------------hhh---cc-cCCc-EEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeC---CC
Confidence 000 11 1355 9999999999999999888887774 356788887 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 469 GHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+|.+... ... ....+.+||.+++..
T Consensus 194 ~H~~~~~-~~~--~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 194 SHFFHRK-LID--LRGALQHGVRRWLPA 218 (220)
T ss_dssp CTTCTTC-HHH--HHHHHHHHHGGGCSS
T ss_pred Cceehhh-HHH--HHHHHHHHHHHHhhc
Confidence 9987553 222 233578999998864
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=184.49 Aligned_cols=193 Identities=17% Similarity=0.219 Sum_probs=149.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.. .+.+++|... .+.|+||++||+.+... .|......|+++||.|+.+|+||.|.....
T Consensus 79 ~~g~~-~~~~~~p~~~----~~~p~vv~~HG~~~~~~--~~~~~~~~la~~G~~vv~~d~~g~g~s~~~----------- 140 (306)
T 3vis_A 79 ADGFG-GGTIYYPREN----NTYGAIAISPGYTGTQS--SIAWLGERIASHGFVVIAIDTNTTLDQPDS----------- 140 (306)
T ss_dssp CSSSC-CEEEEEESSC----SCEEEEEEECCTTCCHH--HHHHHHHHHHTTTEEEEEECCSSTTCCHHH-----------
T ss_pred cCCCc-ceEEEeeCCC----CCCCEEEEeCCCcCCHH--HHHHHHHHHHhCCCEEEEecCCCCCCCcch-----------
Confidence 56654 3677888765 36899999999765432 355556788999999999999998765432
Q ss_pred chHHHHHHHHHHHHHc------CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccc
Q 010654 321 NTFTDFIACAEYLIKN------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE 394 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~ 394 (505)
..+|+.++++++.+. ..+|++|++++|+|+||.+++.++.++|+ ++++++.+|...
T Consensus 141 -~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~---------------- 202 (306)
T 3vis_A 141 -RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL---------------- 202 (306)
T ss_dssp -HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----------------
T ss_pred -HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC----------------
Confidence 237889999999987 67888999999999999999999999887 888888777322
Q ss_pred ccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCC-hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 395 WEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-EPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 395 ~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
...+.+++.| +|++||++|..+|+. ++++++++++..+ ++++++++ +.||...
T Consensus 203 ---------------------~~~~~~~~~P-~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~---g~gH~~~ 256 (306)
T 3vis_A 203 ---------------------NKSWRDITVP-TLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELD---GASHFAP 256 (306)
T ss_dssp ---------------------CCCCTTCCSC-EEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEET---TCCTTGG
T ss_pred ---------------------ccccccCCCC-EEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEEC---CCCccch
Confidence 0112344566 999999999999999 7999999998876 77888888 8899764
Q ss_pred CChHHHHHHHHHHHHHHHHhhCCC
Q 010654 474 SGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 474 ~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
......+ ...+.+||.++++..
T Consensus 257 ~~~~~~~--~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 257 NITNKTI--GMYSVAWLKRFVDED 278 (306)
T ss_dssp GSCCHHH--HHHHHHHHHHHHSCC
T ss_pred hhchhHH--HHHHHHHHHHHccCc
Confidence 4333322 336899999998654
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-21 Score=185.90 Aligned_cols=246 Identities=13% Similarity=0.082 Sum_probs=166.1
Q ss_pred ceEEEE-EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 231 YFTERK-WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 231 ~~~~~~-~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
+..+.+ .+.+.||.+|.+.++.|.+ ++.|+||++||+++... .|......|+++||.|+.+|+||.|.....
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 104 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTG-----TPKALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDHVGHGQSEGE 104 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCGG--GGHHHHHHHHTTTEEEEEECCTTSTTSCSS
T ss_pred cccccCceEEccCCeEEEEEEeCCCC-----CCCcEEEEECCCCcccc--hHHHHHHHHHhCCCeEEEEcCCCCcCCCCc
Confidence 333444 6788999999988776653 45799999999876543 466667788889999999999999876532
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc-----
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML----- 384 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----- 384 (505)
.. ........++|+.++++++..+ .+.++++|+|+|+||++++.++.++|++++++|+.+|..+......
T Consensus 105 ~~---~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 179 (342)
T 3hju_A 105 RM---VVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKV 179 (342)
T ss_dssp TT---CCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHH
T ss_pred CC---CcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHH
Confidence 11 1122234578999999999887 4557999999999999999999999999999999998755321100
Q ss_pred ---------CCCCCCCcccccccCCCCCHHHHHHHHh---------------------CChhhcccCCCCCeEEEEccCC
Q 010654 385 ---------DPTIPLTTAEWEEWGDPWKEEFYFYMKS---------------------YSPVDNVKAQNYPHILVTAGLN 434 (505)
Q Consensus 385 ---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------------~sp~~~~~~~~~Pp~Li~~G~~ 434 (505)
.......... ..+ ...+.+....+.. .+....+.++++| +|+++|+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vlii~G~~ 256 (342)
T 3hju_A 180 LAAKVLNLVLPNLSLGPID-SSV-LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP-FLLLQGSA 256 (342)
T ss_dssp HHHHHHHHHCTTCBCCCCC-GGG-SCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSC-EEEEEETT
T ss_pred HHHHHHHHhccccccCccc-ccc-cccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcC-EEEEEeCC
Confidence 0000000000 000 0011111111110 0112456777888 99999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH-HHHHHHHHHHHHHhhCC
Q 010654 435 DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-LREAAFTYTFLMRALSM 496 (505)
Q Consensus 435 D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~~~~~~fl~~~l~~ 496 (505)
|..+|+..+.++++.+... .+++++++ ++||......++. .+.+..+++||.+++..
T Consensus 257 D~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 257 DRLCDSKGAYLLMELAKSQ--DKTLKIYE---GAYHVLHKELPEVTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp CSSSCHHHHHHHHHHCCCS--SEEEEEET---TCCSCGGGSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcccChHHHHHHHHHcCCC--CceEEEEC---CCCchhhcCChHHHHHHHHHHHHHHhcccCC
Confidence 9999999999988887642 45678887 8899875544443 33455689999998854
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-22 Score=184.03 Aligned_cols=245 Identities=15% Similarity=0.063 Sum_probs=157.8
Q ss_pred ceEEEEEEEC-CCCceeeEEEEEeCCccC----CCCCCcEEEEEcCCCCcCCCCCCch--hHHHHH-HCCcEEEEEcccC
Q 010654 231 YFTERKWASA-SDGTQIPICIVYRKNLVK----LDGSDPLLLYGYGSYEICNDPAFNS--SRLSLL-DRGFIFAIAQIRG 302 (505)
Q Consensus 231 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~~----~~~~~P~iv~~hGg~~~~~~~~~~~--~~~~l~-~~G~~v~~~d~rG 302 (505)
+..+.+++.+ .+|..+++.++.|++. . +.++.|+||++||+.+... .|.. ....++ +.|++|+.+|+++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~-~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~ 81 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDAN-RVEEPECEDIPVLYLLHGMSGNHN--SWLKRTNVERLLRGTNLIVVMPNTSN 81 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC----------CCBCEEEEECCTTCCTT--HHHHHSCHHHHTTTCCCEEEECCCTT
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCc-cccCCcCCCCCEEEEECCCCCCHH--HHHhccCHHHHHhcCCeEEEEECCCC
Confidence 4566777765 4678999999999874 2 3467899999999876543 2333 234454 4799999999998
Q ss_pred CCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 303 GGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 303 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
++...... . ........+|+...++.+..+..+|+++++|+|+|+||++++.++. +|++|+++++.+|..++...
T Consensus 82 ~~~~~~~~---~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~ 156 (263)
T 2uz0_A 82 GWYTDTQY---G-FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNF 156 (263)
T ss_dssp STTSBCTT---S-CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSC
T ss_pred CccccCCC---c-ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhc
Confidence 75432110 0 0000122344445555443324568899999999999999999999 89999999999998875431
Q ss_pred ccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCCC-CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 383 MLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNY-PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 383 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~-Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
............+ ..++.+... .+...+|...+.+++. +|+|++||+.|..++ ++.+++++|++.|.+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~ 230 (263)
T 2uz0_A 157 SPESQNLGSPAYWRGVFGEIRDW----TTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYS 230 (263)
T ss_dssp CGGGTTCSCHHHHHHHHCCCSCT----TTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEE
T ss_pred cccccccccchhHHHHcCChhhh----ccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEE
Confidence 1000000000001 112222111 1134567766766642 459999999999984 6899999999999999988
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+++ | +|.+. ...+....+++||.++|+.+
T Consensus 231 ~~~---g-~H~~~----~~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 231 HSA---G-THEWY----YWEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp EES---C-CSSHH----HHHHHHHHHHHHSSSCCCCC
T ss_pred ECC---C-CcCHH----HHHHHHHHHHHHHHhhccch
Confidence 887 7 99642 11234456899999988755
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=197.54 Aligned_cols=243 Identities=13% Similarity=0.127 Sum_probs=168.3
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-C----------------CCC----chhHHHHH
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-D----------------PAF----NSSRLSLL 289 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~----------------~~~----~~~~~~l~ 289 (505)
+..+.+.++++||.+|.+.++.|++. ++.|+||..||...... . ..+ ....+.|+
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~~----~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 114 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNKD----GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWV 114 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSSS----SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHG
T ss_pred EEEEEEEEECCCCcEEEEEEEecCCC----CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHH
Confidence 35678899999999999999999763 68999999987433211 0 011 12357899
Q ss_pred HCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeE
Q 010654 290 DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA 369 (505)
Q Consensus 290 ~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a 369 (505)
++||+|+.+|+||+|+++..+. ..+....+|+.++++||.+++++| .||+++|+||||++++.+++.+|+.++|
T Consensus 115 ~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~a 188 (560)
T 3iii_A 115 PNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKA 188 (560)
T ss_dssp GGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEE
T ss_pred hCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEE
Confidence 9999999999999999887653 234578999999999999998887 8999999999999999999988999999
Q ss_pred EEecCCchhhhhhc-cCCCCC-CCc-ccc-c-----------------c-cCCCCCHHHHHHHHhCChhhcccCCCCCeE
Q 010654 370 AVAAVPFVDVLTTM-LDPTIP-LTT-AEW-E-----------------E-WGDPWKEEFYFYMKSYSPVDNVKAQNYPHI 427 (505)
Q Consensus 370 ~v~~~~~~d~~~~~-~~~~~~-~~~-~~~-~-----------------~-~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~ 427 (505)
+|+.+|+.|+.... ...... ... ..| . + ...|... ++++..++ .+.+|++| +
T Consensus 189 iv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d---~~W~~~~~--~~~~I~vP-v 262 (560)
T 3iii_A 189 MIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD---DFWKQRQV--PLSQIKTP-L 262 (560)
T ss_dssp EEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC---HHHHTTBC--CGGGCCSC-E
T ss_pred EEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc---hHhhccCC--chhhCCCC-E
Confidence 99999999976421 111110 000 001 0 0 0122111 13344555 57888998 9
Q ss_pred EEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 428 LVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 428 Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
|+++|-.|..+...++.+.+++|+..++ .+.+. +.+|.. ...........++||+++|+...
T Consensus 263 l~v~Gw~D~~~~~~g~l~~y~~l~~~~k---~l~ih---~~~~~~---~~~~~~~~~~~~~wfD~~LkG~~ 324 (560)
T 3iii_A 263 LTCASWSTQGLHNRGSFEGFKQAASEEK---WLYVH---GRKEWE---SYYARENLERQKSFFDFYLKEEN 324 (560)
T ss_dssp EEEEEGGGTTTTHHHHHHHHHHCCCSSE---EEEEE---SSCHHH---HHHSHHHHHHHHHHHHHHTSCCC
T ss_pred EEeCCcCCCcccchhHHHHHHhccccCc---EEEEC---CCCCcC---cccChhHHHHHHHHHHHHhCCCC
Confidence 9999999986666778888887765432 33332 223321 00011233457899999997543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=185.37 Aligned_cols=243 Identities=12% Similarity=0.086 Sum_probs=154.1
Q ss_pred eEEEEEEE-CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcc--cCCCCC-
Q 010654 232 FTERKWAS-ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQI--RGGGEL- 306 (505)
Q Consensus 232 ~~~~~~~~-s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~--rG~~~~- 306 (505)
..+.+.+. ..+|..+.+.++.|++. . .+++|+||++||+++...... .......+.++|++|+.+|. ||.+..
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~ 98 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNP-E-NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPN 98 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCT-T-CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCC
T ss_pred cEEEEEEechhhCCceEEEEEeCCCC-C-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccc
Confidence 34444444 45788999999999886 3 577999999999876543210 01123566778999999996 444321
Q ss_pred --------chhHHHcc-cccC-Ccch-HHHHH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 307 --------GRQWYENG-KFLK-KKNT-FTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 307 --------g~~~~~~~-~~~~-~~~~-~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
|..|.... ...+ .... ...+. +.+.++.+. +.+++|++|+|+|+||++++.++.++|++|+++++.+
T Consensus 99 ~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s 177 (283)
T 4b6g_A 99 DDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKH-FPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFS 177 (283)
T ss_dssp CSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHH-SCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEES
T ss_pred cccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHh-CCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEEC
Confidence 22211100 0000 0011 22222 333444433 3356899999999999999999999999999999999
Q ss_pred CchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCC-ChHHHHHHHHH
Q 010654 375 PFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMY-SEPAKFVAKLR 451 (505)
Q Consensus 375 ~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~-~~~~~~~~~L~ 451 (505)
|+.+..... .....+ ..+|.. ...+ ...+|...+.+++ .||+|++||+.|..++. .++.+++++|+
T Consensus 178 ~~~~~~~~~------~~~~~~~~~~g~~--~~~~---~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~ 246 (283)
T 4b6g_A 178 PILSPSLVP------WGEKAFTAYLGKD--REKW---QQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCR 246 (283)
T ss_dssp CCCCGGGSH------HHHHHHHHHHCSC--GGGG---GGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHH
T ss_pred CccccccCc------chhhhHHhhcCCc--hHHH---HhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHH
Confidence 987743210 000001 111221 1111 2345655555442 33599999999999986 34899999999
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++|+++++.+|+ +.+|.+. .....+...+.|+.++|+
T Consensus 247 ~~g~~~~~~~~~---g~~H~~~----~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 247 AANQPVDVRFHK---GYDHSYY----FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHTCCCEEEEET---TCCSSHH----HHHHHHHHHHHHHHTTCC
T ss_pred HcCCCceEEEeC---CCCcCHh----HHHHHHHHHHHHHHHhcC
Confidence 999999999998 8899642 112234467889988774
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=9.7e-21 Score=181.71 Aligned_cols=232 Identities=18% Similarity=0.134 Sum_probs=156.8
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCchhHHHHH-HCCcEEEEEcccCCCCCchh
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~g~~ 309 (505)
..+.+.+++.|| .+++.++ +. .++.|+||++|||.... ....+......|+ +.||.|+.+||||+++..
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~-----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~-- 125 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ-----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-- 125 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES-----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC--
T ss_pred eEEEEEecCCCC-cEEEEEE-cC-----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC--
Confidence 578888988888 7888866 42 24679999999987322 1233555566777 579999999999988642
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCCc----eeEEEecCCchhhhhh
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPDL----FKAAVAAVPFVDVLTT 382 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~ 382 (505)
.....+|+.++++|+.+.. .+|++||+|+|+|+||++++.++.++++. ++++++.+|+++....
T Consensus 126 ---------~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 196 (311)
T 1jji_A 126 ---------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAP 196 (311)
T ss_dssp ---------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSC
T ss_pred ---------CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCC
Confidence 1245789999999998752 46888999999999999999998887765 9999999998874321
Q ss_pred cc----CCCCC--CCccc----cccc-CCCCCHHHHHHHHhCChhhcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHH
Q 010654 383 ML----DPTIP--LTTAE----WEEW-GDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKL 450 (505)
Q Consensus 383 ~~----~~~~~--~~~~~----~~~~-g~~~~~~~~~~~~~~sp~~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L 450 (505)
.. ....+ +.... +..| +.+.... -...+|+. ..+ ..||+||+||+.|..+ .++.+++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~--~~l~~~~P~li~~G~~D~l~--~~~~~~~~~l 268 (311)
T 1jji_A 197 TPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKF----NPLASVIF--ADLENLPPALIITAEYDPLR--DEGEVFGQML 268 (311)
T ss_dssp CHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGG----CTTTSGGG--SCCTTCCCEEEEEEEECTTH--HHHHHHHHHH
T ss_pred CccHHHhcCCCccCCHHHHHHHHHHhCCCCccCC----CcccCccc--ccccCCChheEEEcCcCcch--HHHHHHHHHH
Confidence 00 00000 00000 0001 1100000 01234543 122 3456999999999998 4788999999
Q ss_pred HhcCCCCCeEEEEecCCCCCCCCCC---hHHHHHHHHHHHHHHHH
Q 010654 451 REMKTDDNILLFKCELGAGHFSKSG---RFERLREAAFTYTFLMR 492 (505)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~ 492 (505)
+++++++++++|+ +.+|++... .....+....+.+||.+
T Consensus 269 ~~~g~~~~~~~~~---g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 269 RRAGVEASIVRYR---GVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHTTCCEEEEEEE---EEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEEEC---CCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999999999999 678965321 12333345567888864
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-21 Score=179.24 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=141.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..+.||++||..++.. .|......|+++||.|+.+|+||+|.+..+... ......++|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s~~--~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~----~~~~~~~~d~~~~~~~l~~~---- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQ--SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAA----STASDWTADIVAAMRWLEER---- 118 (281)
T ss_dssp CSSEEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHT----CCHHHHHHHHHHHHHHHHHH----
T ss_pred CCCceEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEECCCCCCCCCccccC----CCHHHHHHHHHHHHHHHHhC----
Confidence 33467899999765432 366677899999999999999999987554321 11123468888899998764
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-----ccCCCCCCC---------cccccccCCCC----
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-----MLDPTIPLT---------TAEWEEWGDPW---- 402 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-----~~~~~~~~~---------~~~~~~~g~~~---- 402 (505)
.+++.|+|+|+||.+++.++.++|++++++|+.+|...+... ......+.. .....+...+.
T Consensus 119 ~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (281)
T 4fbl_A 119 CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVP 198 (281)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGG
T ss_pred CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchH
Confidence 368999999999999999999999999999999886543211 000010000 00001111110
Q ss_pred -CHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC-hHHHH
Q 010654 403 -KEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-RFERL 480 (505)
Q Consensus 403 -~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~ 480 (505)
..+...... .....+.++++| +|++||++|..||+++++++++++.. .++++++++ ++||....+ .++.+
T Consensus 199 ~~~~~~~~~~--~~~~~l~~i~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~--~~~~l~~~~---~~gH~~~~e~~~e~v 270 (281)
T 4fbl_A 199 AIKHLITIGA--VAEMLLPRVKCP-ALIIQSREDHVVPPHNGELIYNGIGS--TEKELLWLE---NSYHVATLDNDKELI 270 (281)
T ss_dssp GHHHHHHHHH--HHHHHGGGCCSC-EEEEEESSCSSSCTHHHHHHHHHCCC--SSEEEEEES---SCCSCGGGSTTHHHH
T ss_pred HHHHHHHhhh--hccccccccCCC-EEEEEeCCCCCcCHHHHHHHHHhCCC--CCcEEEEEC---CCCCcCccccCHHHH
Confidence 011111111 112346778898 99999999999999999999888754 345788888 889975432 23322
Q ss_pred HHHHHHHHHHHHh
Q 010654 481 REAAFTYTFLMRA 493 (505)
Q Consensus 481 ~~~~~~~~fl~~~ 493 (505)
...+.+||++|
T Consensus 271 --~~~i~~FL~~H 281 (281)
T 4fbl_A 271 --LERSLAFIRKH 281 (281)
T ss_dssp --HHHHHHHHHTC
T ss_pred --HHHHHHHHHhC
Confidence 33588999875
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=187.54 Aligned_cols=237 Identities=13% Similarity=0.086 Sum_probs=158.9
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
...+.+.++. +|..|+++++.|++. ++.|+||++||..+... ..+......|+++||.|+.+|+||.|.....
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~~----~~~P~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~- 238 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNTD----KPHPVVIVSAGLDSLQT-DMWRLFRDHLAKHDIAMLTVDMPSVGYSSKY- 238 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCSS----SCEEEEEEECCTTSCGG-GGHHHHHHTTGGGTCEEEEECCTTSGGGTTS-
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCCC----CCCCEEEEECCCCccHH-HHHHHHHHHHHhCCCEEEEECCCCCCCCCCC-
Confidence 4678888887 788999998888753 57899999999765422 1233334667889999999999998865321
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh---ccCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---MLDPT 387 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~---~~~~~ 387 (505)
...........++++++...+.+|++||+|+|+|+||++++.++..+|++++++|+.+|+.+.... +.. .
T Consensus 239 ------~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~-~ 311 (415)
T 3mve_A 239 ------PLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQ-Q 311 (415)
T ss_dssp ------CCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHT-T
T ss_pred ------CCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHH-H
Confidence 111112233457788888888889999999999999999999999889999999999998542211 001 1
Q ss_pred CCCCccc-c-cccCCC--CCHHHHHHHHhCChhhc----ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 388 IPLTTAE-W-EEWGDP--WKEEFYFYMKSYSPVDN----VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 388 ~~~~~~~-~-~~~g~~--~~~~~~~~~~~~sp~~~----~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
.+..... + ..++.. ........+..+++... +.++++| +|++||++|..+|+.++.++++ .+.+.++
T Consensus 312 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vLii~G~~D~~vp~~~~~~l~~----~~~~~~l 386 (415)
T 3mve_A 312 MPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVP-ILAMSLEGDPVSPYSDNQMVAF----FSTYGKA 386 (415)
T ss_dssp SCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSC-EEEEEETTCSSSCHHHHHHHHH----TBTTCEE
T ss_pred hHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCC-EEEEEeCCCCCCCHHHHHHHHH----hCCCceE
Confidence 1100000 0 112222 22222223334444332 4577887 9999999999999988877655 5667888
Q ss_pred EEEEecCC-CCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 460 LLFKCELG-AGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 460 ~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++|+ + .+|. ...+....+.+||.++|.
T Consensus 387 ~~i~---g~~~h~------~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 387 KKIS---SKTITQ------GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp EEEC---CCSHHH------HHHHHHHHHHHHHHHHHT
T ss_pred EEec---CCCccc------chHHHHHHHHHHHHHHhc
Confidence 8998 4 2221 222334568999999885
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=173.79 Aligned_cols=186 Identities=12% Similarity=0.084 Sum_probs=126.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH----HHHHHc
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA----EYLIKN 336 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~----~~l~~~ 336 (505)
+..|+||++||..+.. ..|....+.|...|+.|+.||.+|.+.|+..+...... ....+++..+.+ +.+.+.
T Consensus 20 ~a~~~Vv~lHG~G~~~--~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~ 95 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTA--ADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQ--NQPALDSALALVGEVVAEIEAQ 95 (210)
T ss_dssp TCSEEEEEECCTTCCH--HHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGG--GTTHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEEeCCCCCH--HHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCccc--chHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999954321 12333344566679999999999887665444321111 112334433333 344444
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChh
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPV 416 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~ 416 (505)
.+|++||+++|+|+||++++.++.++|++|+++++.+|..-.. .. ... ...+
T Consensus 96 -~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~------~~--------------~~~------~~~~- 147 (210)
T 4h0c_A 96 -GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQ------EL--------------AIG------NYKG- 147 (210)
T ss_dssp -TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSS------SC--------------CGG------GCCB-
T ss_pred -CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCCh------hh--------------hhh------hhhh-
Confidence 4799999999999999999999999999999999888742100 00 000 0000
Q ss_pred hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 417 DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 417 ~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
...++ |+|++||++|++||++++++++++|+++|.+++++.|| +.||+.. .+ ++..+.+||.
T Consensus 148 ---~~~~~-Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~yp---g~gH~i~---~~---el~~i~~wL~ 209 (210)
T 4h0c_A 148 ---DFKQT-PVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYP---GRPHTIS---GD---EIQLVNNTIL 209 (210)
T ss_dssp ---CCTTC-EEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEE---TCCSSCC---HH---HHHHHHHTTT
T ss_pred ---hccCC-ceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC---CCCCCcC---HH---HHHHHHHHHc
Confidence 01134 59999999999999999999999999999999999999 8899864 22 2334666764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-19 Score=170.07 Aligned_cols=233 Identities=13% Similarity=0.100 Sum_probs=150.9
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
+...+.+.||.++++.++.|.+. ++.|+||++||++... ....|. .....|++. |.|+.+|+||++....
T Consensus 4 ~~~~~~~~dg~~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~--- 75 (275)
T 3h04_A 4 IKYKVITKDAFALPYTIIKAKNQ----PTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSL--- 75 (275)
T ss_dssp EEEEEECTTSCEEEEEEECCSSS----SCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCH---
T ss_pred eEEEEecCCcEEEEEEEEccCCC----CCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcccc---
Confidence 45677889999999998877642 5689999999987322 122233 344566666 9999999998875422
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC--
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP-- 389 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-- 389 (505)
...++|+.++++++.++ .+.+++.|+|+|+||.+++.++.+ ++++++|+.+|..+...........
T Consensus 76 --------~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 76 --------DCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp --------HHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred --------chhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchh
Confidence 24578999999999987 567899999999999999999997 7899999999987652211100000
Q ss_pred ------CCccccc------cc-CCCC--CHHHHHH----------HHhCC--------hhhcccCCCCCeEEEEccCCCC
Q 010654 390 ------LTTAEWE------EW-GDPW--KEEFYFY----------MKSYS--------PVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 390 ------~~~~~~~------~~-g~~~--~~~~~~~----------~~~~s--------p~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
+...... .. ..+. ....+.. +.... ....+.+++ | +|++||++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P-~lii~G~~D~ 221 (275)
T 3h04_A 144 AKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-P-VFIAHCNGDY 221 (275)
T ss_dssp HHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-C-EEEEEETTCS
T ss_pred hcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-C-EEEEecCCCC
Confidence 0000000 00 0000 0000000 00000 011124445 5 9999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHH-HHHHHHHHHHHHHHhhC
Q 010654 437 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRALS 495 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~l~ 495 (505)
.||+.++.++++.+.. .++++++ ++||........ ..+....+.+||.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~----~~~~~~~---~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 222 DVPVEESEHIMNHVPH----STFERVN---KNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp SSCTHHHHHHHTTCSS----EEEEEEC---SSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCChHHHHHHHHhcCC----ceEEEeC---CCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999888776543 4577887 889976544332 12334568999999874
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=175.70 Aligned_cols=200 Identities=15% Similarity=0.193 Sum_probs=149.3
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCC-cCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE-ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~-~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
..++..+|..+.+.++.|++ ++.|+||++|||+. ......|......|+++||.|+.+|+||++.+..
T Consensus 41 ~~i~~~~~~~~~~~~~~p~~-----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~------ 109 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPEG-----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRI------ 109 (262)
T ss_dssp EEEESSSSTTCEEEEECCSS-----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCH------
T ss_pred cccccCCCCCceEEEEccCC-----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCCh------
Confidence 34444566667777776753 45799999999752 2233446666788899999999999999875321
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchhhhhhccCCCC
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
....+|+.++++++..+.. ++++++|+|+||++++.++.++ |++++++|+.+|+.++...... ..
T Consensus 110 -----~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~-~~ 180 (262)
T 2pbl_A 110 -----SEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT-SM 180 (262)
T ss_dssp -----HHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS-TT
T ss_pred -----HHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh-hh
Confidence 1457899999999988643 7899999999999999999887 8899999999998875433211 00
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
. ..+.. ..+ .+...+|...+.++++| +|++||++|..||+.++.++++++. +++++++ ++
T Consensus 181 ---~---~~~~~--~~~---~~~~~~~~~~~~~~~~P-~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~---~~ 240 (262)
T 2pbl_A 181 ---N---EKFKM--DAD---AAIAESPVEMQNRYDAK-VTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAF---EK 240 (262)
T ss_dssp ---H---HHHCC--CHH---HHHHTCGGGCCCCCSCE-EEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEET---TC
T ss_pred ---h---hhhCC--CHH---HHHhcCcccccCCCCCC-EEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeC---CC
Confidence 0 01111 222 23567888888888887 9999999999999999999999987 6778887 88
Q ss_pred CCCCCCC
Q 010654 469 GHFSKSG 475 (505)
Q Consensus 469 gH~~~~~ 475 (505)
||....+
T Consensus 241 ~H~~~~~ 247 (262)
T 2pbl_A 241 HHFNVIE 247 (262)
T ss_dssp CTTTTTG
T ss_pred CcchHHh
Confidence 9976544
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.5e-21 Score=197.22 Aligned_cols=245 Identities=15% Similarity=0.121 Sum_probs=170.2
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhH-HHHHHCCcEEEEEcccCCCCCchh
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSR-LSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~-~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
..+.+.+++.||.+|.+.++.|++. ++.|+||+.||....... ..|.... +.|+++||+|+.+|+||+|+++..
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~ 83 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDAD----GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGE 83 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECCS----SCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEEEEECCCCCEEEEEEEECCCC----CCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCc
Confidence 4577889999999999999988753 578999999864332110 0122223 789999999999999999998765
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc-hhhhhhc-cCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF-VDVLTTM-LDPT 387 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~-~d~~~~~-~~~~ 387 (505)
+.. ...+.+|+.++++||.++++.+ .||+++|+||||++++.+++++|+.++|+|+.++. .|+.... ....
T Consensus 84 ~~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG 156 (587)
T 3i2k_A 84 FVP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGG 156 (587)
T ss_dssp CCT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTC
T ss_pred ccc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCC
Confidence 532 2367899999999999988776 79999999999999999999889999999999998 7754321 1000
Q ss_pred CCCC--ccccc-------------------------------------------------------c--cCCCCCHHHHH
Q 010654 388 IPLT--TAEWE-------------------------------------------------------E--WGDPWKEEFYF 408 (505)
Q Consensus 388 ~~~~--~~~~~-------------------------------------------------------~--~g~~~~~~~~~ 408 (505)
.... ...|. + ...+.. -.
T Consensus 157 ~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~ 233 (587)
T 3i2k_A 157 ALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDN---DE 233 (587)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSC---CH
T ss_pred ccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCC---Ch
Confidence 1000 00010 0 011110 12
Q ss_pred HHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC--------CCh---H
Q 010654 409 YMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK--------SGR---F 477 (505)
Q Consensus 409 ~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~--------~~~---~ 477 (505)
+++..++...+.+|++| +|+++|..|..+ ..+.+++++|+..+.. .+++-|. .|+.. ... .
T Consensus 234 yw~~~s~~~~l~~I~vP-vL~v~Gw~D~~~--~~~~~~~~~l~~~~~~-~L~iGPw----~H~~~~~~~g~~~~g~~~~~ 305 (587)
T 3i2k_A 234 SWQSISLFERLGGLATP-ALITAGWYDGFV--GESLRTFVAVKDNADA-RLVVGPW----SHSNLTGRNADRKFGIAATY 305 (587)
T ss_dssp HHHTTCCHHHHTTCCCC-EEEEEEEECTTH--HHHHHHHHHHTTTSCE-EEEEEEE----ETTBCSSEETTEECCGGGSC
T ss_pred HHhcCChhhhhccCCCC-EEEEccCCCccc--hHHHHHHHHHhhcCCC-EEEECCc----cccCccccCCCcccCCcccc
Confidence 34566777888999998 999999999876 4688999999887753 5666664 24311 000 0
Q ss_pred HHHHHHHHHHHHHHHhhCCCC
Q 010654 478 ERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 478 ~~~~~~~~~~~fl~~~l~~~~ 498 (505)
...+....+++||+++|+..+
T Consensus 306 ~~~~~~~~~~~wFD~~Lkg~~ 326 (587)
T 3i2k_A 306 PIQEATTMHKAFFDRHLRGET 326 (587)
T ss_dssp CHHHHHHHHHHHHHHHHSCCT
T ss_pred ccchhhHHHHHHHHHHhcCCC
Confidence 111222468999999997543
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=182.06 Aligned_cols=254 Identities=15% Similarity=0.065 Sum_probs=157.3
Q ss_pred CceEEEEEEECCC--Cc--eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCc-----hhHHHHH-HCCcEEEEE
Q 010654 230 NYFTERKWASASD--GT--QIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFN-----SSRLSLL-DRGFIFAIA 298 (505)
Q Consensus 230 ~~~~~~~~~~s~d--G~--~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~-----~~~~~l~-~~G~~v~~~ 298 (505)
.....++.|.+.| |. .+.++++.|.+. .++.|+|++.||..... ..+.+. .....|+ ++||+|+.+
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~---~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~ 116 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP---VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMP 116 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC---SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEE
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC---CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEe
Confidence 4566777777665 53 577999999864 36789999999976421 112111 2235678 999999999
Q ss_pred cccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHH-cCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEe
Q 010654 299 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVA 372 (505)
Q Consensus 299 d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~ 372 (505)
|+||.|+++...+.-.........+.|...++..+.+ .+..+.+||+++|+|+||+++++++..+|+ .++++++
T Consensus 117 D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~ 196 (377)
T 4ezi_A 117 DYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAP 196 (377)
T ss_dssp CCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEE
T ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEe
Confidence 9999998764111000000111334454444444443 355567899999999999999999877543 5788898
Q ss_pred cCCchhhhhhcc----C--------------------CCCCCCcccc-c--------cc--C----------CCC-----
Q 010654 373 AVPFVDVLTTML----D--------------------PTIPLTTAEW-E--------EW--G----------DPW----- 402 (505)
Q Consensus 373 ~~~~~d~~~~~~----~--------------------~~~~~~~~~~-~--------~~--g----------~~~----- 402 (505)
.++..|+...+. . ...|. ...+ . .. + .+.
T Consensus 197 ~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 4ezi_A 197 GSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSG-FDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLI 275 (377)
T ss_dssp ESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSC-HHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGG
T ss_pred cCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccC-HHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHH
Confidence 888776543210 0 00110 0000 0 00 0 000
Q ss_pred -CHHHHHHHH-hCCh-hh------c--ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC--CC
Q 010654 403 -KEEFYFYMK-SYSP-VD------N--VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG--AG 469 (505)
Q Consensus 403 -~~~~~~~~~-~~sp-~~------~--~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~--~g 469 (505)
.+...+.+. ..+| +. . -.+++.| +||+||+.|..||+.++.+++++++++|. ++++.|+ + .+
T Consensus 276 ~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~P-vli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~---~~~~~ 350 (377)
T 4ezi_A 276 FQPKFSNGIISKTDRNTEILKINFNHYDFKPTAP-LLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSV---SDALD 350 (377)
T ss_dssp BCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSC-EEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEES---CSSCC
T ss_pred hchhhhhhcccccchHHHHHHHHhcccCCCCCCC-EEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcC---CCCCC
Confidence 011001111 0122 10 0 1134676 99999999999999999999999999999 9999998 6 68
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
|... ........++||.++++.+
T Consensus 351 H~~~-----~~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 351 HVQA-----HPFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp TTTT-----HHHHHHHHHHHHHHHHTSS
T ss_pred ccCh-----HHHHHHHHHHHHHHhhcch
Confidence 8643 1233456899999998754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-19 Score=171.15 Aligned_cols=241 Identities=13% Similarity=0.094 Sum_probs=161.2
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
.+.+.||.+|.+.++.|.+ ++.|+||++||..+... .|......|+++||.|+.+|+||.|....... ..
T Consensus 21 ~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~ 90 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG-----TPKALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDHVGHGQSEGERM---VV 90 (303)
T ss_dssp EEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTT---CC
T ss_pred eEecCCCeEEEEEEeccCC-----CCCeEEEEECCCCchhh--HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCC---CC
Confidence 5778899999988665543 45799999999865433 46666788999999999999999987653211 11
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc-----------cC
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-----------LD 385 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-----------~~ 385 (505)
......++|+.++++++..+. +.+++.++|+|+||.+++.++.++|++++++|+.+|........ ..
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 168 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLN 168 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHH
Confidence 222345789999999988762 35689999999999999999999999999999999875432110 00
Q ss_pred CCCCCCc-ccc-cccCCCCCHHHHHHHHh---------------------CChhhcccCCCCCeEEEEccCCCCCCCCCh
Q 010654 386 PTIPLTT-AEW-EEWGDPWKEEFYFYMKS---------------------YSPVDNVKAQNYPHILVTAGLNDPRVMYSE 442 (505)
Q Consensus 386 ~~~~~~~-~~~-~~~g~~~~~~~~~~~~~---------------------~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~ 442 (505)
...+... ... ..+. ..+......+.. ......+.++++| +|+++|++|..+|+..
T Consensus 169 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~ 246 (303)
T 3pe6_A 169 SVLPNLSSGPIDSSVL-SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP-FLLLQGSADRLCDSKG 246 (303)
T ss_dssp TTCCSCCCCCCCGGGT-CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSC-EEEEEETTCSSBCHHH
T ss_pred HhcccccCCccchhhh-hcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCC-EEEEeeCCCCCCChHH
Confidence 0000000 000 0000 011111111110 0112446677888 9999999999999999
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH-HHHHHHHHHHHHHhhCC
Q 010654 443 PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-LREAAFTYTFLMRALSM 496 (505)
Q Consensus 443 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~~~~~~fl~~~l~~ 496 (505)
++++++.+... .+++++++ ++||......++. .+....+++||.+++..
T Consensus 247 ~~~~~~~~~~~--~~~~~~~~---~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 247 AYLLMELAKSQ--DKTLKIYE---GAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp HHHHHHHCCCS--SEEEEEET---TCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHhcccC--CceEEEeC---CCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 99888877532 45677787 8899775544443 33355689999998864
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-20 Score=176.73 Aligned_cols=247 Identities=15% Similarity=0.082 Sum_probs=157.4
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchh---HHHHHHCCcEEEEEcccCCCCCc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS---RLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~---~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
.++.+++.|. .|.++.++ +|+.. +++|+||++||+++......|... .+.+++.|++|+++|.++++.|.
T Consensus 8 ~v~~~~~~S~~~~~~i~v~--~~p~~----~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~ 81 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ--FQSGG----ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS 81 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE--EECCS----TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC
T ss_pred eEEEEEEECccCCCceEEE--ECCCC----CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCcccc
Confidence 4456666665 46677665 45543 568999999998532222223321 25567789999999998765442
Q ss_pred hhHHHcccc--cCCcchHHHH--HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKF--LKKKNTFTDF--IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~--~~~~~~~~D~--~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
. |...... ......++++ .+++.++.++..+++++++|+|+||||++++.++.++|++|+++++.+|..++....
T Consensus 82 ~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 160 (304)
T 1sfr_A 82 D-WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAM 160 (304)
T ss_dssp B-CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTT
T ss_pred c-cCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccc
Confidence 1 1110000 0011233333 234445544334677899999999999999999999999999999999987643210
Q ss_pred cC--------CCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCC--------------CCC
Q 010654 384 LD--------PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDP--------------RVM 439 (505)
Q Consensus 384 ~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~--------------~vp 439 (505)
.. ...... ....+|.+... .+...+|...+.++ +.+|++++||+.|+ .++
T Consensus 161 ~~~~~~~~~~~~~~~~--~~~~~g~~~~~----~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~ 234 (304)
T 1sfr_A 161 GPTLIGLAMGDAGGYK--ASDMWGPKEDP----AWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFV 234 (304)
T ss_dssp HHHHHHHHHHHTTSCC--HHHHHCSTTST----HHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHH
T ss_pred hhhhhhHhhhhccccc--hHHhcCCcchh----hhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHH
Confidence 00 000000 00124444322 23567887666554 22359999999998 678
Q ss_pred CChHHHHHHHHHhcC-CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 440 YSEPAKFVAKLREMK-TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 440 ~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
..++++++++|+++| +++++.+|+ +++|... .....+...+.||.++|+.++
T Consensus 235 ~~~~~~~~~~L~~~G~~~v~~~~~~---~g~H~~~----~w~~~l~~~l~~l~~~l~~~~ 287 (304)
T 1sfr_A 235 RTSNIKFQDAYNAGGGHNGVFDFPD---SGTHSWE----YWGAQLNAMKPDLQRALGATP 287 (304)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCS---CCCSSHH----HHHHHHHHTHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCCCCceEEEecC---CCccCHH----HHHHHHHHHHHHHHHhcCCCc
Confidence 899999999999999 998877775 5589531 112334467899999998653
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.6e-20 Score=171.23 Aligned_cols=239 Identities=15% Similarity=0.163 Sum_probs=152.4
Q ss_pred eEEEEEE-ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 232 FTERKWA-SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 232 ~~~~~~~-~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
..+.+.+ .+.||.++.+....+.+ .+.|+||++||+.+......+......++++||.|+.+|+||.|......
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 84 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ-----DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAF 84 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS-----TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCG
T ss_pred CcceEEEeeccCcceEEEEeccCCC-----CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCcc
Confidence 3444554 56789888765433221 23699999999876543322333456677889999999999998765432
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh---CC---CceeEEEecCCchhhhhhcc
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RP---DLFKAAVAAVPFVDVLTTML 384 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~---~p---~~~~a~v~~~~~~d~~~~~~ 384 (505)
.. .......+|+.++++++. .+++.++|+|+||.+++.++.+ +| ++++++|+.+|..++.....
T Consensus 85 ~~----~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~ 154 (270)
T 3llc_A 85 RD----GTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI 154 (270)
T ss_dssp GG----CCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT
T ss_pred cc----ccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh
Confidence 11 111123556666666552 5789999999999999999999 99 99999999999877544221
Q ss_pred CCCCCCC------cc-cc---cccC-CC--CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 385 DPTIPLT------TA-EW---EEWG-DP--WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 385 ~~~~~~~------~~-~~---~~~g-~~--~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
....... .. .+ ..+. .+ .................+.++++| +|++||++|..||+.++.++++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~v~~~~~~~~~~~~~ 233 (270)
T 3llc_A 155 EPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCP-VHILQGMADPDVPYQHALKLVEHLP 233 (270)
T ss_dssp GGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSC-EEEEEETTCSSSCHHHHHHHHHTSC
T ss_pred hhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCC-EEEEecCCCCCCCHHHHHHHHHhcC
Confidence 1010000 00 00 0111 11 123344444555566777888898 9999999999999999988888775
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
. .++++++++ ++||.+... .........+.+||.+
T Consensus 234 ~--~~~~~~~~~---~~gH~~~~~-~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 234 A--DDVVLTLVR---DGDHRLSRP-QDIDRMRNAIRAMIEP 268 (270)
T ss_dssp S--SSEEEEEET---TCCSSCCSH-HHHHHHHHHHHHHHC-
T ss_pred C--CCeeEEEeC---CCccccccc-ccHHHHHHHHHHHhcC
Confidence 4 246778887 889965421 1122223345666654
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-20 Score=171.71 Aligned_cols=206 Identities=17% Similarity=0.101 Sum_probs=141.2
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEccc---CCCCCchhHHHccc-
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIR---GGGELGRQWYENGK- 315 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~r---G~~~~g~~~~~~~~- 315 (505)
.+.+...+...|+. ++++.|+||++||..... ..|......|..+ ++.++.|+-+ ...+.|..|.....
T Consensus 48 ~~~~~l~y~~~p~~---~~~~~plVI~LHG~G~~~--~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~ 122 (285)
T 4fhz_A 48 IMTRKLTFGRRGAA---PGEATSLVVFLHGYGADG--ADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWL 122 (285)
T ss_dssp CCCCCCCEEEEESC---TTCCSEEEEEECCTTBCH--HHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHH
T ss_pred cccccceeecCCCC---CCCCCcEEEEEcCCCCCH--HHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccc
Confidence 34444344455653 467889999999954322 1233334566654 8889988743 12234444431100
Q ss_pred -ccCC-------cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCC
Q 010654 316 -FLKK-------KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT 387 (505)
Q Consensus 316 -~~~~-------~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~ 387 (505)
.... .....++.+.++.+.++..+|++||+|+|+|+||++++.++.++|+.|+++|+.+|....
T Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~-------- 194 (285)
T 4fhz_A 123 DGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA-------- 194 (285)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC--------
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC--------
Confidence 0000 123456666777777776789999999999999999999999999999999988763210
Q ss_pred CCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 388 IPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 388 ~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
++.. . ...+.++| +|++||+.|++||++++++++++|+++|.++++.+|+ +
T Consensus 195 ----------------~~~~---~------~~~~~~~P-vl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~---g 245 (285)
T 4fhz_A 195 ----------------PERL---A------EEARSKPP-VLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMK---G 245 (285)
T ss_dssp ----------------HHHH---H------HHCCCCCC-EEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEET---T
T ss_pred ----------------chhh---h------hhhhhcCc-ccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEEC---C
Confidence 1110 0 01122455 9999999999999999999999999999999999998 8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.||+.. .+ ++..+.+||.++|.
T Consensus 246 ~gH~i~---~~---~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 246 TGHGIA---PD---GLSVALAFLKERLP 267 (285)
T ss_dssp CCSSCC---HH---HHHHHHHHHHHHCC
T ss_pred CCCCCC---HH---HHHHHHHHHHHHCc
Confidence 899863 22 34458899999984
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=186.23 Aligned_cols=147 Identities=16% Similarity=0.100 Sum_probs=112.2
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC------------CCCCc----hhHHHHHHCCc
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN------------DPAFN----SSRLSLLDRGF 293 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~------------~~~~~----~~~~~l~~~G~ 293 (505)
.+..+.+.+++.+|..++++++.|++. .++.|+||++||..+... ...|. ...+.|+++||
T Consensus 84 g~~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~ 160 (391)
T 3g8y_A 84 GYILEKWEFYPFPKSVSTFLVLKPEHL---KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGY 160 (391)
T ss_dssp TEEEEEEEECCSTTCCEEEEEEEETTC---CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTC
T ss_pred CEEEEEEEEEcCCCCEEEEEEEeCCCC---CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCC
Confidence 577888999999999999999999863 367899999999654321 01122 45678999999
Q ss_pred EEEEEcccCCCCCchhHHH----------cc------cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHH
Q 010654 294 IFAIAQIRGGGELGRQWYE----------NG------KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357 (505)
Q Consensus 294 ~v~~~d~rG~~~~g~~~~~----------~~------~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~ 357 (505)
+|+.+|+||+|+.+..-.. .. ........+.|+.+++++|.+++.+|++||+|+|+|+||++++
T Consensus 161 ~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al 240 (391)
T 3g8y_A 161 VAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMM 240 (391)
T ss_dssp EEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHH
Confidence 9999999999876643110 00 0001112348999999999999999999999999999999999
Q ss_pred HHHhhCCCceeEEEecCCchhhh
Q 010654 358 AVLNMRPDLFKAAVAAVPFVDVL 380 (505)
Q Consensus 358 ~~~~~~p~~~~a~v~~~~~~d~~ 380 (505)
.+++. +++++++|+.+++..+.
T Consensus 241 ~~a~~-~~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 241 VLGVL-DKDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHH-CTTCCEEEEESCBCCHH
T ss_pred HHHHc-CCceeEEEEccCCCCcc
Confidence 99886 56889999887777653
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=177.24 Aligned_cols=189 Identities=12% Similarity=0.078 Sum_probs=133.4
Q ss_pred CCCCcEEEEEcCCCCcC---CCCCCchhHHHH----HHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHH
Q 010654 260 DGSDPLLLYGYGSYEIC---NDPAFNSSRLSL----LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEY 332 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~---~~~~~~~~~~~l----~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~ 332 (505)
.++.|+||++|||+... ....|......| +++||.|+.+|+|++++.. ....++|+.+++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----------~~~~~~d~~~~~~~ 106 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNITR 106 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-----------CCcHHHHHHHHHHH
Confidence 35689999999976432 223455555666 5789999999999876421 22567899999999
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-----------------CCceeEEEecCCchhhhhhccCCCCCCCcccc
Q 010654 333 LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-----------------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW 395 (505)
Q Consensus 333 l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-----------------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~ 395 (505)
+.++ +++++++|+|+|+||++++.++.++ |++++++++.+|+.++....... +......
T Consensus 107 l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~--~~~~~~~ 182 (273)
T 1vkh_A 107 LVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY--PEYDCFT 182 (273)
T ss_dssp HHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC--GGGHHHH
T ss_pred HHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhc--ccHHHHH
Confidence 9887 5778999999999999999999875 78899999999987754332110 0000000
Q ss_pred -cccCC-CC----CHHHHHHHHhCChhh--cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 396 -EEWGD-PW----KEEFYFYMKSYSPVD--NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 396 -~~~g~-~~----~~~~~~~~~~~sp~~--~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
..++. +. ... ..+|.. ....+++| +|++||++|..||+.++.+++++|++.+.++++++++ +
T Consensus 183 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~---~ 252 (273)
T 1vkh_A 183 RLAFPDGIQMYEEEPS------RVMPYVKKALSRFSID-MHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDD---L 252 (273)
T ss_dssp HHHCTTCGGGCCCCHH------HHHHHHHHHHHHHTCE-EEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEEC---C
T ss_pred HHHhcccccchhhccc------ccChhhhhcccccCCC-EEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeC---C
Confidence 00111 00 111 112211 11224565 9999999999999999999999999999999999998 8
Q ss_pred CCCCCC
Q 010654 468 AGHFSK 473 (505)
Q Consensus 468 ~gH~~~ 473 (505)
+||...
T Consensus 253 ~gH~~~ 258 (273)
T 1vkh_A 253 GLHNDV 258 (273)
T ss_dssp CSGGGG
T ss_pred Cccccc
Confidence 899754
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.7e-20 Score=165.07 Aligned_cols=197 Identities=12% Similarity=-0.011 Sum_probs=133.8
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc------ccc
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN------GKF 316 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~------~~~ 316 (505)
|..+. +++.|+.. ++.| ||++||..+... .|......|+ .||.|+.+|.++....+..|... ...
T Consensus 2 G~~~~-~~~~~~~~----~~~p-vv~lHG~g~~~~--~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~ 72 (209)
T 3og9_A 2 GHMTD-YVFKAGRK----DLAP-LLLLHSTGGDEH--QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKE 72 (209)
T ss_dssp --CCC-EEEECCCT----TSCC-EEEECCTTCCTT--TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGG
T ss_pred CCcce-EEEeCCCC----CCCC-EEEEeCCCCCHH--HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccC
Confidence 44443 34555432 4578 999999765433 3555555665 79999999965333222223210 000
Q ss_pred ----cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 317 ----LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 317 ----~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
.......+++.+.++.+.++..+|++|++|+|+|+||.+++.++.++|++++++|+.+|..... ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------~~---- 142 (209)
T 3og9_A 73 NFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLED------FE---- 142 (209)
T ss_dssp GBCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCC------CC----
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCc------cc----
Confidence 0111345666677777766666799999999999999999999999999999999998854310 00
Q ss_pred ccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 393 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 393 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
......++| +|++||++|+.||+++++++++.|++.+.++++.+|+ .||.+
T Consensus 143 ------------------------~~~~~~~~p-~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~----~gH~~ 193 (209)
T 3og9_A 143 ------------------------QTVQLDDKH-VFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS----LGHQL 193 (209)
T ss_dssp ------------------------CCCCCTTCE-EEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS----STTSC
T ss_pred ------------------------ccccccCCC-EEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC----CCCcC
Confidence 001123454 9999999999999999999999999999988877764 58976
Q ss_pred CCChHHHHHHHHHHHHHHHHh
Q 010654 473 KSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 473 ~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.. + ....+.+||.++
T Consensus 194 ~~---~---~~~~~~~~l~~~ 208 (209)
T 3og9_A 194 TQ---E---EVLAAKKWLTET 208 (209)
T ss_dssp CH---H---HHHHHHHHHHHH
T ss_pred CH---H---HHHHHHHHHHhh
Confidence 41 2 234577898764
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-20 Score=180.70 Aligned_cols=147 Identities=12% Similarity=0.055 Sum_probs=112.5
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC------------CCCCc----hhHHHHHHCC
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN------------DPAFN----SSRLSLLDRG 292 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~------------~~~~~----~~~~~l~~~G 292 (505)
..+..+.+.+.+.||.+++++++.|++. .++.|+||++||+.+... ...|. ...+.|+++|
T Consensus 88 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~G 164 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPKCVSTFLVLIPDNI---NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEG 164 (398)
T ss_dssp SSEEEEEEEECCSTTBCEEEEEEEESSC---CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTT
T ss_pred CCEEEEEEEEEcCCCcEEEEEEEeCCCC---CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCC
Confidence 3578899999999999999999999863 367899999999765321 11222 3567899999
Q ss_pred cEEEEEcccCCCCCchhHHHc----------------ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHH
Q 010654 293 FIFAIAQIRGGGELGRQWYEN----------------GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLI 356 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~~~~~----------------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~ 356 (505)
|+|+.+|+||+|+.+...... .........+.|+.++++||.+++.+|++||+|+|+|+||+++
T Consensus 165 y~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a 244 (398)
T 3nuz_A 165 YIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244 (398)
T ss_dssp CEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHH
Confidence 999999999998775432100 0001112345899999999999999999999999999999999
Q ss_pred HHHHhhCCCceeEEEecCCchhh
Q 010654 357 GAVLNMRPDLFKAAVAAVPFVDV 379 (505)
Q Consensus 357 ~~~~~~~p~~~~a~v~~~~~~d~ 379 (505)
+.+++.. ++++++|+.+++..+
T Consensus 245 ~~~aa~~-~~i~a~v~~~~~~~~ 266 (398)
T 3nuz_A 245 MVLGTLD-TSIYAFVYNDFLCQT 266 (398)
T ss_dssp HHHHHHC-TTCCEEEEESCBCCH
T ss_pred HHHHhcC-CcEEEEEEecccccc
Confidence 9988864 578888886665543
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=171.54 Aligned_cols=213 Identities=14% Similarity=0.114 Sum_probs=140.6
Q ss_pred EEEEEEE---CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC-chhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 233 TERKWAS---ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-NSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 233 ~~~~~~~---s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
...++|. +.+|..+.++++.|++. ..+.|+||++||+.+... .| ......++++||.|+.+|+|+.+..+.
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~---~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~ 98 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGY---TPDRPVVVVQHGVLRNGA--DYRDFWIPAADRHKLLIVAPTFSDEIWPGV 98 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTC---CTTSCEEEEECCTTCCHH--HHHHHTHHHHHHHTCEEEEEECCTTTSCHH
T ss_pred CceEEecccCCCCCceEEEEEEeCCCC---CCCCcEEEEeCCCCCCHH--HHHHHHHHHHHHCCcEEEEeCCccccCCCc
Confidence 3445565 67888999998888764 246799999999876532 23 333567788999999999996532111
Q ss_pred hHHHccc--------ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-ceeEEEecC-Cchh
Q 010654 309 QWYENGK--------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAV-PFVD 378 (505)
Q Consensus 309 ~~~~~~~--------~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~-~~~d 378 (505)
.+...+. .......++|+.++++++.++..+|++||+|+|+|+||++++.++.++|+ +++++|+.. |+.+
T Consensus 99 ~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~ 178 (304)
T 3d0k_A 99 ESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYT 178 (304)
T ss_dssp HHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCC
T ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccc
Confidence 1111010 01112456889999999999877899999999999999999999999995 778777444 6654
Q ss_pred hhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCC-----------------CC
Q 010654 379 VLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVM-----------------YS 441 (505)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp-----------------~~ 441 (505)
+.... . .+ .++.... ..+|......++.| +|++||+.|..+. ..
T Consensus 179 ~~~~~----~-----~~-~~~~~~~--------~~~~~~~~~~~~~p-~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~ 239 (304)
T 3d0k_A 179 LPTFE----H-----RF-PEGLDGV--------GLTEDHLARLLAYP-MTILAGDQDIATDDPNLPSEPAALRQGPHRYA 239 (304)
T ss_dssp CSSTT----S-----BT-TTSSBTT--------TCCHHHHHHHHHSC-CEEEEETTCCCC--CCSCCSHHHHTTCSSHHH
T ss_pred cCCcc----c-----cC-ccccCCC--------CCCHHHHHhhhcCC-EEEEEeCCCCCccccccccChhhhccCccHHH
Confidence 32210 0 01 0111100 11333222333466 9999999999752 23
Q ss_pred hHHHHHHHHH----hcCCC--CCeEEEEecCCCCCCC
Q 010654 442 EPAKFVAKLR----EMKTD--DNILLFKCELGAGHFS 472 (505)
Q Consensus 442 ~~~~~~~~L~----~~~~~--~~~~~~~~~~~~gH~~ 472 (505)
.+.++++.++ +.+++ +++++|+ +.||.+
T Consensus 240 ~~~~~~~~l~~~a~~~g~~~~~~~~~~p---g~gH~~ 273 (304)
T 3d0k_A 240 RARHYYEAGQRAAAQRGLPFGWQLQVVP---GIGHDG 273 (304)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCEEEEET---TCCSCH
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEEEeC---CCCCch
Confidence 4667777776 77877 8899998 889964
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.5e-19 Score=167.14 Aligned_cols=241 Identities=14% Similarity=0.133 Sum_probs=152.7
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
+..+.+.+.+ +|..+....+.+... .++.|+||++||+++... .|......|+++||.|+.+|+||.|.....
T Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~p~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~- 90 (315)
T 4f0j_A 18 YPVHYLDFTS-QGQPLSMAYLDVAPK---KANGRTILLMHGKNFCAG--TWERTIDVLADAGYRVIAVDQVGFCKSSKP- 90 (315)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEEECCS---SCCSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCC-
T ss_pred ccceeEEEec-CCCCeeEEEeecCCC---CCCCCeEEEEcCCCCcch--HHHHHHHHHHHCCCeEEEeecCCCCCCCCC-
Confidence 3556666665 566666654444332 356799999999876543 366677889999999999999998875431
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC-
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP- 389 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~- 389 (505)
......++++.+.+..+++. ++.+++.++|||+||++++.++.++|++++++|+.+|..............
T Consensus 91 ------~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 162 (315)
T 4f0j_A 91 ------AHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRS 162 (315)
T ss_dssp ------SSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCC
T ss_pred ------CccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhh
Confidence 11234667777777776665 244689999999999999999999999999999998853210000000000
Q ss_pred ----------CCccc---c--ccc-CC---CCCHH-----------------------HHHHHHhCChhhcccCCCCCeE
Q 010654 390 ----------LTTAE---W--EEW-GD---PWKEE-----------------------FYFYMKSYSPVDNVKAQNYPHI 427 (505)
Q Consensus 390 ----------~~~~~---~--~~~-g~---~~~~~-----------------------~~~~~~~~sp~~~~~~~~~Pp~ 427 (505)
..... + ..+ .. +.... .+..+...+....+.++++| +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P-~ 241 (315)
T 4f0j_A 163 VDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMP-T 241 (315)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSC-E
T ss_pred hHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCC-e
Confidence 00000 0 000 00 00000 11112233444567788898 9
Q ss_pred EEEccCCCCCCCCChH------------HHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 428 LVTAGLNDPRVMYSEP------------AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 428 Li~~G~~D~~vp~~~~------------~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
|+++|++|..+|..+. .+..+.+.+....+++++++ ++||......++.+ ...+.+||.+
T Consensus 242 lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~gH~~~~~~p~~~--~~~i~~fl~~ 313 (315)
T 4f0j_A 242 LLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFP---DLGHTPQIQAPERF--HQALLEGLQT 313 (315)
T ss_dssp EEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEET---TCCSCHHHHSHHHH--HHHHHHHHCC
T ss_pred EEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeC---CCCcchhhhCHHHH--HHHHHHHhcc
Confidence 9999999999997665 66677777766677888887 88997543333322 2346677753
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.6e-20 Score=166.47 Aligned_cols=196 Identities=13% Similarity=0.068 Sum_probs=138.3
Q ss_pred EEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcc-------------------cCCCCCchhH
Q 010654 250 IVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQI-------------------RGGGELGRQW 310 (505)
Q Consensus 250 l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~-------------------rG~~~~g~~~ 310 (505)
++.|+.. ++.|+||++||..+... .|......|+++||.|+.+|. ||........
T Consensus 14 ~~~p~~~----~~~~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~ 87 (232)
T 1fj2_A 14 AIVPAAR----KATAAVIFLHGLGDTGH--GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQED 87 (232)
T ss_dssp EEECCSS----CCSEEEEEECCSSSCHH--HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBC
T ss_pred cccCCCC----CCCceEEEEecCCCccc--hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccc
Confidence 4666643 56899999999875432 244444566667999999954 4431100000
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
........+|+.++++++.+ ..+|+++++++|+|+||++++.++.++|++++++++.+|..+....+
T Consensus 88 -----~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------- 154 (232)
T 1fj2_A 88 -----ESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------- 154 (232)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-------
T ss_pred -----cHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-------
Confidence 00011345666677777766 45788999999999999999999999999999999999976543211
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC--CCeEEEEecCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD--DNILLFKCELGA 468 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~--~~~~~~~~~~~~ 468 (505)
+. ......++++| +|++||++|..+|+.+++++++.|++.+.+ +++++++ ++
T Consensus 155 ----------~~------------~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~ 208 (232)
T 1fj2_A 155 ----------PQ------------GPIGGANRDIS-ILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYE---GM 208 (232)
T ss_dssp ----------CS------------SCCCSTTTTCC-EEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEET---TC
T ss_pred ----------cc------------cccccccCCCC-EEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeC---CC
Confidence 00 01123445676 999999999999999999999999998865 8888887 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 469 GHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
||... .+. ...+.+||.++|..
T Consensus 209 ~H~~~---~~~---~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 209 MHSSC---QQE---MMDVKQFIDKLLPP 230 (232)
T ss_dssp CSSCC---HHH---HHHHHHHHHHHSCC
T ss_pred CcccC---HHH---HHHHHHHHHHhcCC
Confidence 99762 222 34689999998864
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-19 Score=168.78 Aligned_cols=239 Identities=14% Similarity=0.102 Sum_probs=152.5
Q ss_pred ceEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCC
Q 010654 231 YFTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGEL 306 (505)
Q Consensus 231 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~ 306 (505)
...+.+++.|. +|..++++ +.|++ .|+||++||+........|.. ..+.+++.|++|+.+|.++++.|
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~-------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~ 80 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG-------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMY 80 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS-------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTT
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC-------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCcc
Confidence 35567777765 78889888 66653 289999999853222222322 23567778999999999876544
Q ss_pred chhHHHcccccCCcchHHHH--HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc
Q 010654 307 GRQWYENGKFLKKKNTFTDF--IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 384 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~--~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~ 384 (505)
. +|... ..+ .+.+. .+.+.++.++..+|+++++|+|+||||++++.++.++|++|+++++.+|..++.....
T Consensus 81 ~-~~~~~---~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 154 (280)
T 1r88_A 81 T-NWEQD---GSK--QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTT 154 (280)
T ss_dssp S-BCSSC---TTC--BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHH
T ss_pred C-CCCCC---CCC--cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccc
Confidence 2 11110 001 22221 2344455553346888999999999999999999999999999999999876432110
Q ss_pred CC--------CCCCCcccccccCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEc----cCCCCC-------CCCChH
Q 010654 385 DP--------TIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTA----GLNDPR-------VMYSEP 443 (505)
Q Consensus 385 ~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~----G~~D~~-------vp~~~~ 443 (505)
.. ...+. ....+|.+... .+.+.+|+.+++++ +.+|+++.| |+.|.. ++..++
T Consensus 155 ~~~~~~~~~~~~~~~--~~~~~g~~~~~----~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~ 228 (280)
T 1r88_A 155 NGAIAAGMQQFGGVD--TNGMWGAPQLG----RWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNS 228 (280)
T ss_dssp HHHHHHHHHHHHCCC--THHHHCCGGGS----TTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHH
T ss_pred hhhHHHHhhhccccc--hhhhcCCCchh----hhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHH
Confidence 00 00000 00123433211 12456777666555 334599999 999984 688999
Q ss_pred HHHHHHHHhcC-CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 444 AKFVAKLREMK-TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 444 ~~~~~~L~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
++++++|+++| +++++.+|+ +++|... .....+...+.||.+.|..
T Consensus 229 ~~~~~~L~~~g~~~~~~~~~~---~g~H~~~----~w~~~l~~~l~~~~~~~~~ 275 (280)
T 1r88_A 229 RMFYNQYRSVGGHNGHFDFPA---SGDNGWG----SWAPQLGAMSGDIVGAIRH 275 (280)
T ss_dssp HHHHHHHHHTTCCSEEEECCS---SCCSSHH----HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCcceEEEecC---CCCcChh----HHHHHHHHHHHHHHHHHhh
Confidence 99999999999 888777765 6689532 1122344567888877643
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=172.68 Aligned_cols=221 Identities=11% Similarity=0.062 Sum_probs=145.4
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCchhHHHHH-HCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
+.++++.|.+ ++.|+||++|||+... ....|......|+ +.||.|+.+||||+++... ...+
T Consensus 84 ~~~~~~~p~~-----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~-----------~~~~ 147 (326)
T 3d7r_A 84 MQVFRFNFRH-----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI-----------DDTF 147 (326)
T ss_dssp EEEEEEESTT-----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH-----------HHHH
T ss_pred EEEEEEeeCC-----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc-----------hHHH
Confidence 5556666653 3569999999986432 2222334445666 4599999999999765322 1357
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc----eeEEEecCCchhhhhhccCCCCCCCcccccccC
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL----FKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWG 399 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g 399 (505)
+|+.++++++.++ +++++++|+|+|+||.+++.++.++|+. ++++|+.+|..+..... ... . .......
T Consensus 148 ~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~--~~~--~-~~~~~~~ 220 (326)
T 3d7r_A 148 QAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSN--KDI--S-DALIEQD 220 (326)
T ss_dssp HHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC--TTC--C-HHHHHHC
T ss_pred HHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCC--hhH--H-hhhcccC
Confidence 9999999999887 6889999999999999999999887776 99999999987753211 000 0 0000000
Q ss_pred CCCCHHHH----HHHH--------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 400 DPWKEEFY----FYMK--------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 400 ~~~~~~~~----~~~~--------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
........ ..+. ..+|+...-+ ..||+||+||++|.. ..++.+++++|++.+.++++++|+ +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~lii~G~~D~~--~~~~~~~~~~l~~~~~~~~~~~~~---g 294 (326)
T 3d7r_A 221 AVLSQFGVNEIMKKWANGLPLTDKRISPINGTIE-GLPPVYMFGGGREMT--HPDMKLFEQMMLQHHQYIEFYDYP---K 294 (326)
T ss_dssp SSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCT-TCCCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEET---T
T ss_pred cccCHHHHHHHHHHhcCCCCCCCCeECcccCCcc-cCCCEEEEEeCcccc--hHHHHHHHHHHHHCCCcEEEEEeC---C
Confidence 00000000 0100 1244432111 234699999999964 457889999999999999999998 8
Q ss_pred CCCCCCC-ChHHHHHHHHHHHHHHHHhhC
Q 010654 468 AGHFSKS-GRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 468 ~gH~~~~-~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.+|.+.. ...+..+....+.+||.+++.
T Consensus 295 ~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 295 MVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp CCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred CcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 8997642 112333345568899988775
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.80 E-value=7.9e-19 Score=161.85 Aligned_cols=216 Identities=12% Similarity=0.090 Sum_probs=143.3
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC-chhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~-g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
++.|+||++||..+... .|......|+++||.|+.+|+||.|.. +...... .......+|+.++++++..+
T Consensus 20 ~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~---~~~~~~~~d~~~~i~~l~~~--- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPN--DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK---GNPDIWWAESSAAVAHMTAK--- 91 (251)
T ss_dssp CSSEEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH---CCHHHHHHHHHHHHHHHHTT---
T ss_pred CCCceEEEeCCCCCCHH--HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc---ccHHHHHHHHHHHHHHHHHh---
Confidence 45689999999766543 466667889999999999999999877 3332211 01223468888899998876
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccc-cccCCCCCHHH--------HHHH
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEF--------YFYM 410 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~--------~~~~ 410 (505)
.++++++|||+||++++.++.++|+++++++..+|..............+ ...+ ...+....... ...+
T Consensus 92 -~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (251)
T 3dkr_A 92 -YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKY-AEYMNRLAGKSDESTQILAYLPGQLAAI 169 (251)
T ss_dssp -CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHH-HHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred -cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHH-HHHHHhhcccCcchhhHHhhhHHHHHHH
Confidence 57999999999999999999999999999999988765211000000000 0000 00011000000 0000
Q ss_pred Hh--CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh-HHHHHHHHHHH
Q 010654 411 KS--YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR-FERLREAAFTY 487 (505)
Q Consensus 411 ~~--~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~ 487 (505)
.. .++...+.++++| +|+++|++|..+|+.++.++++.+... .++++++++ ++||...... .+. ....+.
T Consensus 170 ~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~gH~~~~~~~~~~--~~~~i~ 242 (251)
T 3dkr_A 170 DQFATTVAADLNLVKQP-TFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYD---DAKHVITVNSAHHA--LEEDVI 242 (251)
T ss_dssp HHHHHHHHHTGGGCCSC-EEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEET---TCCSCTTTSTTHHH--HHHHHH
T ss_pred HHHHHHHhccccccCCC-EEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeC---CCCcccccccchhH--HHHHHH
Confidence 00 0134456777887 999999999999999999999988764 456778887 8899765432 332 234578
Q ss_pred HHHHHh
Q 010654 488 TFLMRA 493 (505)
Q Consensus 488 ~fl~~~ 493 (505)
+||.+.
T Consensus 243 ~fl~~~ 248 (251)
T 3dkr_A 243 AFMQQE 248 (251)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 898764
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-19 Score=164.56 Aligned_cols=196 Identities=13% Similarity=0.140 Sum_probs=133.2
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-----CcEEEEEcccCCC------CCchhHHHc-cc---ccCCcchHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-----GFIFAIAQIRGGG------ELGRQWYEN-GK---FLKKKNTFTD 325 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-----G~~v~~~d~rG~~------~~g~~~~~~-~~---~~~~~~~~~D 325 (505)
++.|+||++||..+... .|......|+++ ||.|+.++.++.. +.+..|... +. .......+++
T Consensus 21 ~~~p~vv~lHG~g~~~~--~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 98 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQ--GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDV 98 (239)
T ss_dssp CCCEEEEEECCTTCCHH--HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHH
T ss_pred CCCcEEEEEecCCCchh--hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHH
Confidence 56899999999765422 244445566654 7999999986431 222223210 00 0111134444
Q ss_pred HHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCC
Q 010654 326 FIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW 402 (505)
Q Consensus 326 ~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 402 (505)
+.+.+..+++. ..+|.++++|+|+|+||++++.++.++|++++++|+.+|..+....
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------- 158 (239)
T 3u0v_A 99 MCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA-------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH--------------------
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH--------------------
Confidence 44444444332 3468899999999999999999999999999999999886542110
Q ss_pred CHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHH
Q 010654 403 KEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLRE 482 (505)
Q Consensus 403 ~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 482 (505)
.+..+. ....++||+|++||++|..||++++.++++.|++.+.++++++|+ +++|.+. . +.
T Consensus 159 ---~~~~~~-------~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~---g~~H~~~---~---~~ 219 (239)
T 3u0v_A 159 ---VYQALQ-------KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFP---NVYHELS---K---TE 219 (239)
T ss_dssp ---HHHHHH-------HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEET---TCCSSCC---H---HH
T ss_pred ---HHHHHH-------hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeC---CCCCcCC---H---HH
Confidence 011111 123356669999999999999999999999999999999999998 8899865 2 23
Q ss_pred HHHHHHHHHHhhCCC
Q 010654 483 AAFTYTFLMRALSML 497 (505)
Q Consensus 483 ~~~~~~fl~~~l~~~ 497 (505)
...+.+||.++|...
T Consensus 220 ~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 220 LDILKLWILTKLPGE 234 (239)
T ss_dssp HHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHhCCCc
Confidence 445789999998643
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=161.76 Aligned_cols=219 Identities=16% Similarity=0.056 Sum_probs=152.1
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc----
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG---- 314 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~---- 314 (505)
...+|.. ..++.|.+ +.|+||++||..+... .|......|+++||.|+.+|+||.|..........
T Consensus 8 ~~~~g~~--~~~~~~~~------~~~~vv~~hG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~ 77 (238)
T 1ufo_A 8 LTLAGLS--VLARIPEA------PKALLLALHGLQGSKE--HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRY 77 (238)
T ss_dssp EEETTEE--EEEEEESS------CCEEEEEECCTTCCHH--HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTH
T ss_pred cccCCEE--EEEEecCC------CccEEEEECCCcccch--HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccch
Confidence 3345643 34455542 5799999999865432 23334457788899999999999886543211000
Q ss_pred ---cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCC
Q 010654 315 ---KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLT 391 (505)
Q Consensus 315 ---~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 391 (505)
.........+|+.++++++.+.+. ++++++|+|+||.+++.++.++|+++++++...+.... . ... .
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~-~-~~~-~---- 147 (238)
T 1ufo_A 78 VEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPM-K-LPQ-G---- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCC-C-CCT-T----
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccc-h-hhh-h----
Confidence 000012456788889999887654 78999999999999999999999988888877664321 0 000 0
Q ss_pred cccccccCCCCCHHHHHHHHhCChhhcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHHH-hcCC-CCCeEEEEecCCC
Q 010654 392 TAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLR-EMKT-DDNILLFKCELGA 468 (505)
Q Consensus 392 ~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~-~~~~-~~~~~~~~~~~~~ 468 (505)
.+..|.. ...+...++...+.++ ++| +|++||++|..+|+..+.++++.++ +.+. ++++++++ ++
T Consensus 148 -----~~~~~~~---~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 215 (238)
T 1ufo_A 148 -----QVVEDPG---VLALYQAPPATRGEAYGGVP-LLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEE---GA 215 (238)
T ss_dssp -----CCCCCHH---HHHHHHSCGGGCGGGGTTCC-EEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEET---TC
T ss_pred -----hccCCcc---cchhhcCChhhhhhhccCCc-EEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeC---CC
Confidence 0112211 3445667888888888 787 9999999999999999999999999 8887 78888887 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 469 GHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
||.... + ....+.+||.++|+
T Consensus 216 ~H~~~~---~---~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 216 GHTLTP---L---MARVGLAFLEHWLE 236 (238)
T ss_dssp CSSCCH---H---HHHHHHHHHHHHHH
T ss_pred CcccHH---H---HHHHHHHHHHHHHh
Confidence 997642 2 23357788888774
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.3e-20 Score=172.69 Aligned_cols=214 Identities=17% Similarity=0.096 Sum_probs=142.6
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHH-HHCC---cEEEEEcccCCCCC
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSL-LDRG---FIFAIAQIRGGGEL 306 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l-~~~G---~~v~~~d~rG~~~~ 306 (505)
..+.+++.+. +|..+.++++.|+++ ++++++|+|+++||++.......+......+ .+.| ++|+.+|+|+++.+
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~-~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~ 95 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQP-APDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAF 95 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSC-CCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSC
T ss_pred CceEEEEEecCCCCEEEEEEECCCCC-CCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcC
Confidence 5677888886 788999999999988 6667899999999985311000011011112 3457 99999999987554
Q ss_pred chhHH--Hcccc----------------cCC-cchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC
Q 010654 307 GRQWY--ENGKF----------------LKK-KNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 307 g~~~~--~~~~~----------------~~~-~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~ 365 (505)
+..-+ +.... ..+ ...+.+.. +.+.++.++..+|++|++|+|+|+||++++.++.++|+
T Consensus 96 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~ 175 (275)
T 2qm0_A 96 SGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLN 175 (275)
T ss_dssp CHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGG
T ss_pred cccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCch
Confidence 32111 10000 011 11333432 34455566555788999999999999999999999999
Q ss_pred ceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 366 LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 366 ~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
+|+++++.+|...|...... . .. ....... + ...... +++++||+.|..++..++++
T Consensus 176 ~f~~~~~~s~~~~~~~~~~~-----------~--~~--~~~~~~~---~----~~~~~~-~~~l~~G~~D~~~~~~~~~~ 232 (275)
T 2qm0_A 176 AFQNYFISSPSIWWNNKSVL-----------E--KE--ENLIIEL---N----NAKFET-GVFLTVGSLEREHMVVGANE 232 (275)
T ss_dssp GCSEEEEESCCTTHHHHGGG-----------G--GT--THHHHHH---H----TCSSCE-EEEEEEETTSCHHHHHHHHH
T ss_pred hhceeEEeCceeeeChHHHH-----------H--HH--HHHHhhh---c----ccCCCc-eEEEEeCCcccchhhHHHHH
Confidence 99999999998765332100 0 00 0111010 0 122234 59999999999999999999
Q ss_pred HHHHH---HhcCCCCCeEEEEecCCCCCCC
Q 010654 446 FVAKL---REMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 446 ~~~~L---~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
++++| +++|+++++.+|+ +++|+.
T Consensus 233 ~~~~L~~~~~~g~~~~~~~~~---g~~H~~ 259 (275)
T 2qm0_A 233 LSERLLQVNHDKLKFKFYEAE---GENHAS 259 (275)
T ss_dssp HHHHHHHCCCTTEEEEEEEET---TCCTTT
T ss_pred HHHHHHhcccCCceEEEEECC---CCCccc
Confidence 99999 6678888888887 778853
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=165.92 Aligned_cols=202 Identities=10% Similarity=0.069 Sum_probs=135.6
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-----CchhHHHHHHC----CcEEEEEccc
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-----FNSSRLSLLDR----GFIFAIAQIR 301 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-----~~~~~~~l~~~----G~~v~~~d~r 301 (505)
-..+.+++.+.+| .+.++++.|+++ .+++++|+||++||+++....+. +......|+++ +|+|+.+|++
T Consensus 39 g~~~~~~~~s~~~-~~~~~vy~P~~~-~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~ 116 (297)
T 1gkl_A 39 GRIVKETYTGING-TKSLNVYLPYGY-DPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFN 116 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTC-CTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSC
T ss_pred ceEEEEEEEcCCC-EEEEEEEeCCCC-CCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCc
Confidence 3567788888887 889999999987 55678999999999876543221 12234566666 4999999999
Q ss_pred CCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CC-----------CCCCcEEEEeeChHHHHHHHHHhhCCCceeE
Q 010654 302 GGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CY-----------CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA 369 (505)
Q Consensus 302 G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~-----------~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a 369 (505)
|+.+.+..|.. ...+|+ +.++.+. .. .|+++++|+|+||||++++.++.++|++|++
T Consensus 117 ~~~~~~~~~~~--------~~~~~l---~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~ 185 (297)
T 1gkl_A 117 GGNCTAQNFYQ--------EFRQNV---IPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAY 185 (297)
T ss_dssp STTCCTTTHHH--------HHHHTH---HHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCE
T ss_pred CCccchHHHHH--------HHHHHH---HHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhhe
Confidence 76543333321 112333 3444443 21 3778999999999999999999999999999
Q ss_pred EEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHH
Q 010654 370 AVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAK 449 (505)
Q Consensus 370 ~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~ 449 (505)
+++.+|...+.. . .+. ........+. ...+.....+ +++.+|+.|..+ .++++++++
T Consensus 186 ~v~~sg~~~~~~------~-----~~~-----~~~~~~~~~~----~~~~~~~~~~-l~~~~G~~D~~~--~~~~~l~~~ 242 (297)
T 1gkl_A 186 FMPLSGDYWYGN------S-----PQD-----KANSIAEAIN----RSGLSKREYF-VFAATGSEDIAY--ANMNPQIEA 242 (297)
T ss_dssp EEEESCCCCBSS------S-----HHH-----HHHHHHHHHH----HHTCCTTSCE-EEEEEETTCTTH--HHHHHHHHH
T ss_pred eeEeccccccCC------c-----cch-----hhhHHHHHHh----hccCCcCcEE-EEEEeCCCcccc--hhHHHHHHH
Confidence 999999653210 0 000 0001111111 1112222343 777899999875 588999999
Q ss_pred HHhcC----------CCCCeEEEEecCCCCCC
Q 010654 450 LREMK----------TDDNILLFKCELGAGHF 471 (505)
Q Consensus 450 L~~~~----------~~~~~~~~~~~~~~gH~ 471 (505)
|+++| +++++.+++ ++||.
T Consensus 243 L~~~g~~~~~~~~~~~~~~~~~~~---g~gH~ 271 (297)
T 1gkl_A 243 MKALPHFDYTSDFSKGNFYFLVAP---GATHW 271 (297)
T ss_dssp HHTSTTCCBBSCTTTCCEEEEEET---TCCSS
T ss_pred HHHcCCccccccccCCceEEEECC---CCCcC
Confidence 99998 578888887 77995
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=154.41 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=137.6
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch--hHHHHHHCCcEEEEEcccCCCCC---chhHHHccc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS--SRLSLLDRGFIFAIAQIRGGGEL---GRQWYENGK 315 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~--~~~~l~~~G~~v~~~d~rG~~~~---g~~~~~~~~ 315 (505)
.||.+++++++.|++ +.|+||++||+.+... .|.. ....|+++||.|+.+|+||.|.. ...
T Consensus 11 ~~g~~l~~~~~~~~~------~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~------ 76 (207)
T 3bdi_A 11 VNGTRVFQRKMVTDS------NRRSIALFHGYSFTSM--DWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKY------ 76 (207)
T ss_dssp ETTEEEEEEEECCTT------CCEEEEEECCTTCCGG--GGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTT------
T ss_pred eCCcEEEEEEEeccC------CCCeEEEECCCCCCcc--ccchHHHHHHHHhCCCeEEEEcCCcccccCcccCC------
Confidence 488999998777653 4689999999876543 4555 67889999999999999988765 221
Q ss_pred ccCCcc-hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccc
Q 010654 316 FLKKKN-TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE 394 (505)
Q Consensus 316 ~~~~~~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~ 394 (505)
.... .++++.+.+..++++- +.++++++|+|+||.+++.++.++|++++++++.+|.... .
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-~------------- 138 (207)
T 3bdi_A 77 --GIDRGDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-S------------- 138 (207)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-G-------------
T ss_pred --CCCcchHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-c-------------
Confidence 1122 5677777777776653 4579999999999999999999999999999999885210 0
Q ss_pred ccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 395 WEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 395 ~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
+ ...+.+++.| +|+++|++|..+|+..+.++++.+ .++++++++ +++|....
T Consensus 139 ~--------------------~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~---~~~H~~~~ 190 (207)
T 3bdi_A 139 L--------------------KGDMKKIRQK-TLLVWGSKDHVVPIALSKEYASII----SGSRLEIVE---GSGHPVYI 190 (207)
T ss_dssp G--------------------HHHHTTCCSC-EEEEEETTCTTTTHHHHHHHHHHS----TTCEEEEET---TCCSCHHH
T ss_pred h--------------------hHHHhhccCC-EEEEEECCCCccchHHHHHHHHhc----CCceEEEeC---CCCCCccc
Confidence 0 1123345566 999999999999998888887776 356777887 78997532
Q ss_pred ChHHHHHHHHHHHHHHHH
Q 010654 475 GRFERLREAAFTYTFLMR 492 (505)
Q Consensus 475 ~~~~~~~~~~~~~~fl~~ 492 (505)
...+. ....+.+||.+
T Consensus 191 ~~~~~--~~~~i~~fl~~ 206 (207)
T 3bdi_A 191 EKPEE--FVRITVDFLRN 206 (207)
T ss_dssp HSHHH--HHHHHHHHHHT
T ss_pred cCHHH--HHHHHHHHHhh
Confidence 22222 22346677753
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.80 E-value=8.5e-19 Score=164.10 Aligned_cols=215 Identities=11% Similarity=0.075 Sum_probs=142.6
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|+||++||.++... .|......|+++||.|+.+|+||.|........ .......+|+.++++++.++ .
T Consensus 39 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~----~~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTPH--SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMER----TTFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCCGG--GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHT----CCHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCChh--HHHHHHHHHHHCCCEEEEeCCCCCCCCcccccc----CCHHHHHHHHHHHHHHHHhh----C
Confidence 3599999999865433 366667889999999999999999887553321 12224578888999998876 5
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC-CCCCCCcccccccC------------CC-CCHHHH
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD-PTIPLTTAEWEEWG------------DP-WKEEFY 407 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~~~~~~~~~~~~~g------------~~-~~~~~~ 407 (505)
++++++|+|+||++++.++.++|+ ++++|+.+|..+....... .........+..++ .. .....+
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASL 187 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHH
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHH
Confidence 799999999999999999999999 9999999887654322100 00000000000000 00 001111
Q ss_pred HHH-Hh-CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 010654 408 FYM-KS-YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAF 485 (505)
Q Consensus 408 ~~~-~~-~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 485 (505)
..+ .. .+....+.++++| +|+++|++|..+|+.++.++++.+... ++++++++ ++||....... ..+....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~gH~~~~~~~-~~~~~~~ 260 (270)
T 3rm3_A 188 LQLARLMAQTKAKLDRIVCP-ALIFVSDEDHVVPPGNADIIFQGISST--EKEIVRLR---NSYHVATLDYD-QPMIIER 260 (270)
T ss_dssp HHHHHHHHHHHHTGGGCCSC-EEEEEETTCSSSCTTHHHHHHHHSCCS--SEEEEEES---SCCSCGGGSTT-HHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCC-EEEEECCCCcccCHHHHHHHHHhcCCC--cceEEEeC---CCCcccccCcc-HHHHHHH
Confidence 111 00 0223456677887 999999999999999999999887643 44778887 78997644322 1122345
Q ss_pred HHHHHHHhh
Q 010654 486 TYTFLMRAL 494 (505)
Q Consensus 486 ~~~fl~~~l 494 (505)
+.+||.++.
T Consensus 261 i~~fl~~~~ 269 (270)
T 3rm3_A 261 SLEFFAKHA 269 (270)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 889998865
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-19 Score=165.43 Aligned_cols=184 Identities=18% Similarity=0.158 Sum_probs=130.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEE--cccCCCCCchhHHHc-ccccC----CcchHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIA--QIRGGGELGRQWYEN-GKFLK----KKNTFTDFIACAEYL 333 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~--d~rG~~~~g~~~~~~-~~~~~----~~~~~~D~~~~~~~l 333 (505)
++.|+||++||+.+... .|......|++ +|.|+.+ |+||.|+++. ... ..... ....++|+.++++++
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFFDFGARLLP-QATILSPVGDVSEHGAARF--FRRTGEGVYDMVDLERATGKMADFIKAN 134 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHHHHHHHHST-TSEEEEECCSEEETTEEES--SCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh--HHHHHHHhcCC-CceEEEecCCcCCCCCccc--ccCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 46799999999875432 24444455655 5999999 7888875431 100 00111 113467888888887
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhC
Q 010654 334 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSY 413 (505)
Q Consensus 334 ~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 413 (505)
.++. +.++++|+|+|+||++++.++.++|++++++|+.+|..+...
T Consensus 135 ~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------------- 180 (251)
T 2r8b_A 135 REHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------------- 180 (251)
T ss_dssp HHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------------
T ss_pred Hhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc--------------------------------
Confidence 7664 678999999999999999999999999999999998754210
Q ss_pred ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 414 SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 414 sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
......+++| +|++||++|..+|+.++.+++++|++++.++++ .++ ++||.... + ....+.+||.++
T Consensus 181 --~~~~~~~~~P-~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~gH~~~~---~---~~~~~~~~l~~~ 247 (251)
T 2r8b_A 181 --KISPAKPTRR-VLITAGERDPICPVQLTKALEESLKAQGGTVET-VWH---PGGHEIRS---G---EIDAVRGFLAAY 247 (251)
T ss_dssp --CCCCCCTTCE-EEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEE---SSCSSCCH---H---HHHHHHHHHGGG
T ss_pred --cccccccCCc-EEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-Eec---CCCCccCH---H---HHHHHHHHHHHh
Confidence 0011223565 999999999999999999999999988877655 455 67997631 2 234578999998
Q ss_pred hCC
Q 010654 494 LSM 496 (505)
Q Consensus 494 l~~ 496 (505)
|+.
T Consensus 248 l~~ 250 (251)
T 2r8b_A 248 GGG 250 (251)
T ss_dssp C--
T ss_pred cCC
Confidence 863
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=165.43 Aligned_cols=226 Identities=15% Similarity=0.110 Sum_probs=140.2
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC-CCCchhHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQWY 311 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~g~~~~ 311 (505)
.+...+.+.||.+|+++...|+.. ..++.|+||++||..+... .|......|+++||.|+.+|+||+ |.+.....
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~--~~~~~~~VvllHG~g~~~~--~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~ 82 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN--VPFKNNTILIASGFARRMD--HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID 82 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT--SCCCSCEEEEECTTCGGGG--GGHHHHHHHHTTTCCEEEECCCBCC--------
T ss_pred ceEEEEEcCCCCEEEEEEecCccc--CCCCCCEEEEecCCccCch--HHHHHHHHHHHCCCEEEEeeCCCCCCCCCCccc
Confidence 345567788999998886655432 1235689999999765432 466667888899999999999998 65432211
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc---cCCCC
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---LDPTI 388 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~---~~~~~ 388 (505)
...-....+|+.++++++.+.+ .+++.++||||||.+++.++.+ | +++++|..+|..++.... .....
T Consensus 83 ----~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~ 153 (305)
T 1tht_A 83 ----EFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDY 153 (305)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCG
T ss_pred ----ceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhh
Confidence 0011134578888888887543 3689999999999999999887 7 788888887765432111 00000
Q ss_pred -CCCcccc---ccc-CCCCCHH-HHHHHHhC------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 389 -PLTTAEW---EEW-GDPWKEE-FYFYMKSY------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 389 -~~~~~~~---~~~-g~~~~~~-~~~~~~~~------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
....... ..+ +...... ........ +....+.++++| +|++||++|..+|+..+.++++.+... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~vp~~~~~~l~~~i~~~--~ 230 (305)
T 1tht_A 154 LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVP-LIAFTANNDDWVKQEEVYDMLAHIRTG--H 230 (305)
T ss_dssp GGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSC-EEEEEETTCTTSCHHHHHHHHTTCTTC--C
T ss_pred hhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCC-EEEEEeCCCCccCHHHHHHHHHhcCCC--C
Confidence 0000000 000 1000111 11111111 123456778898 999999999999998888877655322 3
Q ss_pred CCeEEEEecCCCCCCCCCChHH
Q 010654 457 DNILLFKCELGAGHFSKSGRFE 478 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~ 478 (505)
.++++++ ++||... ..++
T Consensus 231 ~~l~~i~---~agH~~~-e~p~ 248 (305)
T 1tht_A 231 CKLYSLL---GSSHDLG-ENLV 248 (305)
T ss_dssp EEEEEET---TCCSCTT-SSHH
T ss_pred cEEEEeC---CCCCchh-hCch
Confidence 5778888 8999875 3444
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-18 Score=155.93 Aligned_cols=185 Identities=15% Similarity=0.116 Sum_probs=133.7
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEE--cccCCCCCchhHHHcccccCC----cchHHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIA--QIRGGGELGRQWYENGKFLKK----KNTFTDFIACAEYLI 334 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~--d~rG~~~~g~~~~~~~~~~~~----~~~~~D~~~~~~~l~ 334 (505)
++.|+||++||+.+... .|......|++ ||.|+.+ |.||.|.... +......... ...+.++.+.++++.
T Consensus 36 ~~~~~vv~~HG~~~~~~--~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 111 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL--DLLPLAEIVDS-EASVLSVRGNVLENGMPRF-FRRLAEGIFDEEDLIFRTKELNEFLDEAA 111 (226)
T ss_dssp TTSCEEEEECCTTCCTT--TTHHHHHHHHT-TSCEEEECCSEEETTEEES-SCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh--HHHHHHHHhcc-CceEEEecCcccCCcchhh-ccccCccCcChhhHHHHHHHHHHHHHHHH
Confidence 46799999999876533 35555667776 9999999 8888774321 0000000001 134556667777777
Q ss_pred HcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCC
Q 010654 335 KNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYS 414 (505)
Q Consensus 335 ~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~s 414 (505)
++..+++++++++|+|+||++++.++.++|++++++++.+|..+...
T Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------------------- 158 (226)
T 2h1i_A 112 KEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------------------- 158 (226)
T ss_dssp HHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------------------
T ss_pred hhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------------------
Confidence 77777889999999999999999999999999999999998754210
Q ss_pred hhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 415 PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 415 p~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
......++.| +|+++|+.|..+|+.++.++++.+++.+.++++ +++ ++||... .+ ....+.+||.++|
T Consensus 159 -~~~~~~~~~p-~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~gH~~~---~~---~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 -MQLANLAGKS-VFIAAGTNDPICSSAESEELKVLLENANANVTM-HWE---NRGHQLT---MG---EVEKAKEWYDKAF 226 (226)
T ss_dssp -CCCCCCTTCE-EEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEE---SSTTSCC---HH---HHHHHHHHHHHHC
T ss_pred -cccccccCCc-EEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeC---CCCCCCC---HH---HHHHHHHHHHHhC
Confidence 0001122455 999999999999999999999999998888777 888 7899763 12 2345788998764
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=156.94 Aligned_cols=190 Identities=15% Similarity=0.070 Sum_probs=132.3
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHH--CCcEEEEEcccCC------CCCchhHHH-cccc---cCCc----chHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLD--RGFIFAIAQIRGG------GELGRQWYE-NGKF---LKKK----NTFT 324 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~------~~~g~~~~~-~~~~---~~~~----~~~~ 324 (505)
++.|+||++||..+... .|......|++ +||.|+.+|.+|. |..+..|.+ .+.. .... ...+
T Consensus 12 ~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~ 89 (218)
T 1auo_A 12 PADACVIWLHGLGADRY--DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp CCSEEEEEECCTTCCTT--TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh--hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHHH
Confidence 56899999999875433 36666778888 9999999987641 111111111 0000 0111 2245
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh-hCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCC
Q 010654 325 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWK 403 (505)
Q Consensus 325 D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~ 403 (505)
|+.+.++++.+ ..+|+++++++|+|+||++++.++. ++|++++++|+.+|..+. . ..+ ..
T Consensus 90 ~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~-----~-~~~----------~~-- 150 (218)
T 1auo_A 90 MVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT-----F-GDE----------LE-- 150 (218)
T ss_dssp HHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT-----C-CTT----------CC--
T ss_pred HHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC-----c-hhh----------hh--
Confidence 55555666555 3468899999999999999999999 899999999999997654 0 110 00
Q ss_pred HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHH
Q 010654 404 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREA 483 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 483 (505)
.. ..++++| +|++||++|..+|+++++++++.+++.+.++++++++ +||.... + ..
T Consensus 151 ---------~~----~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~----~gH~~~~---~---~~ 206 (218)
T 1auo_A 151 ---------LS----ASQQRIP-ALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP----MGHEVLP---Q---EI 206 (218)
T ss_dssp ---------CC----HHHHTCC-EEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES----CSSSCCH---H---HH
T ss_pred ---------hh----hcccCCC-EEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec----CCCccCH---H---HH
Confidence 00 1233566 9999999999999999999999999998888888886 4897632 2 23
Q ss_pred HHHHHHHHHhhC
Q 010654 484 AFTYTFLMRALS 495 (505)
Q Consensus 484 ~~~~~fl~~~l~ 495 (505)
..+.+||.++|+
T Consensus 207 ~~~~~~l~~~l~ 218 (218)
T 1auo_A 207 HDIGAWLAARLG 218 (218)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 357889988764
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=171.52 Aligned_cols=148 Identities=13% Similarity=0.095 Sum_probs=100.2
Q ss_pred eEEEEEEECCC--C--ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC---------CCCchhHHHHHHCCcEEEEE
Q 010654 232 FTERKWASASD--G--TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND---------PAFNSSRLSLLDRGFIFAIA 298 (505)
Q Consensus 232 ~~~~~~~~s~d--G--~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~---------~~~~~~~~~l~~~G~~v~~~ 298 (505)
...++.|.+.+ | ..+.++++.|.+. .+.++.|+||++||+.+.... ..+......|+++||+|+.+
T Consensus 45 ~~~~i~y~t~~~~g~~~~~~g~l~~P~~~-~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~ 123 (397)
T 3h2g_A 45 RVAEFTYATIGVEGEPATASGVLLIPGGE-RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGS 123 (397)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEECT-TCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEE
T ss_pred EEEEEEEEecCCCCCeEEEEEEEEeCCCC-CCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEe
Confidence 45556665543 4 3588999999876 556788999999998775432 22555667889999999999
Q ss_pred cccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHh-hCC----C-ceeEEE
Q 010654 299 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLN-MRP----D-LFKAAV 371 (505)
Q Consensus 299 d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~-~~p----~-~~~a~v 371 (505)
|+||+|.++...............+.|...++..+.++ +..|+++|+++|||+||+++++++. ..+ + .+.+++
T Consensus 124 D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~ 203 (397)
T 3h2g_A 124 DYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASA 203 (397)
T ss_dssp CCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEE
T ss_pred cCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEe
Confidence 99999876422110000000013456666666665544 6666789999999999999988762 222 1 578888
Q ss_pred ecCCchhhh
Q 010654 372 AAVPFVDVL 380 (505)
Q Consensus 372 ~~~~~~d~~ 380 (505)
..++..|+.
T Consensus 204 ~~~~~~~l~ 212 (397)
T 3h2g_A 204 PISGPYALE 212 (397)
T ss_dssp EESCCSSHH
T ss_pred cccccccHH
Confidence 887777754
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=158.88 Aligned_cols=200 Identities=18% Similarity=0.150 Sum_probs=138.0
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccc-c----
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-F---- 316 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~-~---- 316 (505)
++..+... ++|+.. .+.|+||++||+.+... .|......|++ ||.|+.+|.++..+.|..|..... .
T Consensus 14 ~~~~l~~~-~~~~~~----~~~p~vv~lHG~g~~~~--~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~ 85 (223)
T 3b5e_A 14 TDLAFPYR-LLGAGK----ESRECLFLLHGSGVDET--TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQ 85 (223)
T ss_dssp CSSSSCEE-EESTTS----SCCCEEEEECCTTBCTT--TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECH
T ss_pred cCCCceEE-EeCCCC----CCCCEEEEEecCCCCHH--HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccH
Confidence 44566554 555543 23499999999876543 35555566654 999999998764322333321110 0
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
.......+|+.+.++++.++..+|+++++++|+|+||.+++.++.++|++++++++.+|.....
T Consensus 86 ~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------------- 149 (223)
T 3b5e_A 86 KSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD---------------- 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc----------------
Confidence 0011345677777777777645788999999999999999999999999999999998864310
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
.+ + ....+++| +|++||++|..||+.+++ +++.|++++.++++++|+ .||....
T Consensus 150 ---~~-------------~--~~~~~~~P-~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~----~gH~~~~-- 203 (223)
T 3b5e_A 150 ---HV-------------P--ATDLAGIR-TLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP----SGHDIGD-- 203 (223)
T ss_dssp ---SC-------------C--CCCCTTCE-EEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES----CCSCCCH--
T ss_pred ---cc-------------c--cccccCCC-EEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec----CCCCcCH--
Confidence 00 0 11223555 999999999999999999 999999999888888886 4897642
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 010654 477 FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~ 495 (505)
+ ....+.+||.+.+.
T Consensus 204 -~---~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 204 -P---DAAIVRQWLAGPIA 218 (223)
T ss_dssp -H---HHHHHHHHHHCC--
T ss_pred -H---HHHHHHHHHHhhhh
Confidence 2 22357889987653
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=170.76 Aligned_cols=146 Identities=20% Similarity=0.195 Sum_probs=100.8
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccC--CCCCCcEEEEEcCCCCcCCCCC----CchhHHHHHHCCcEEEEEcccCC
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEICNDPA----FNSSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~--~~~~~P~iv~~hGg~~~~~~~~----~~~~~~~l~~~G~~v~~~d~rG~ 303 (505)
.+..+...+.+.||..+.++.+.|... . ..++.|+||++||.++....+. +......|+++||.|+.+|+||.
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~-~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRK-NSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSS-CCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCC-CccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 456678888999999998875544321 1 1136799999999876543221 11223488899999999999998
Q ss_pred CCCchhHHHcccc----cCC-cchHH-HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecC
Q 010654 304 GELGRQWYENGKF----LKK-KNTFT-DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAV 374 (505)
Q Consensus 304 ~~~g~~~~~~~~~----~~~-~~~~~-D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~ 374 (505)
|.....-...... ... ....+ |+.++++++.++- +.+++.++|||+||.+++.++.++|+ +++++|+.+
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 8764310000000 111 12234 8888898877652 34689999999999999999999998 899999888
Q ss_pred Cchh
Q 010654 375 PFVD 378 (505)
Q Consensus 375 ~~~d 378 (505)
|...
T Consensus 181 ~~~~ 184 (377)
T 1k8q_A 181 PVAT 184 (377)
T ss_dssp CCSC
T ss_pred Cchh
Confidence 8653
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.6e-18 Score=155.60 Aligned_cols=191 Identities=15% Similarity=0.116 Sum_probs=132.5
Q ss_pred CCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH--CCcEEEEEcccCCCC-----C-chhHHHc-ccc---cCCcch---
Q 010654 258 KLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD--RGFIFAIAQIRGGGE-----L-GRQWYEN-GKF---LKKKNT--- 322 (505)
Q Consensus 258 ~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~~-----~-g~~~~~~-~~~---~~~~~~--- 322 (505)
..+++.|+||++||+.+... .|......|++ +||.|+.+|++|.+. + +..|.+. +.+ ......
T Consensus 19 ~~~~~~~~vv~lHG~~~~~~--~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~ 96 (226)
T 3cn9_A 19 DAPNADACIIWLHGLGADRT--DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNA 96 (226)
T ss_dssp CCTTCCEEEEEECCTTCCGG--GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHH
T ss_pred cCCCCCCEEEEEecCCCChH--HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHH
Confidence 34467899999999875432 35666678887 999999998885321 0 1111100 000 111123
Q ss_pred -HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh-hCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 323 -FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 323 -~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
.+++..+++++.+ ..+|+++++++|+|+||.+++.++. ++|++++++++.+|..+....+ +
T Consensus 97 ~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~-------------~--- 159 (226)
T 3cn9_A 97 SADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL-------------A--- 159 (226)
T ss_dssp HHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC-------------C---
T ss_pred HHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh-------------h---
Confidence 3444444455444 2467889999999999999999999 8999999999999976543211 0
Q ss_pred CCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH
Q 010654 401 PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 480 (505)
Q Consensus 401 ~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 480 (505)
.. ..++++| +|+++|+.|..+|+++++++++.++..+.++++++++ +||.... +
T Consensus 160 ------------~~----~~~~~~P-~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~----~gH~~~~---~-- 213 (226)
T 3cn9_A 160 ------------LD----ERHKRIP-VLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP----MGHEVSL---E-- 213 (226)
T ss_dssp ------------CC----TGGGGCC-EEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES----CCSSCCH---H--
T ss_pred ------------hc----ccccCCC-EEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec----CCCCcch---h--
Confidence 01 1334566 9999999999999999999999999999888888886 4897632 2
Q ss_pred HHHHHHHHHHHHhh
Q 010654 481 REAAFTYTFLMRAL 494 (505)
Q Consensus 481 ~~~~~~~~fl~~~l 494 (505)
....+.+||.++|
T Consensus 214 -~~~~i~~~l~~~l 226 (226)
T 3cn9_A 214 -EIHDIGAWLRKRL 226 (226)
T ss_dssp -HHHHHHHHHHHHC
T ss_pred -hHHHHHHHHHhhC
Confidence 2335788998765
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-18 Score=157.66 Aligned_cols=185 Identities=15% Similarity=0.175 Sum_probs=129.8
Q ss_pred EEEEEeCCccCC-CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHH
Q 010654 248 ICIVYRKNLVKL-DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF 326 (505)
Q Consensus 248 ~~l~~p~~~~~~-~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~ 326 (505)
+.+++|... .. +++.|+||++||+.+.. ..|......|+++||.|+.+|+||+.. ..|+
T Consensus 34 ~~~~~p~~~-~~~g~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~~s~~-----------------~~~~ 93 (258)
T 2fx5_A 34 CRIYRPRDL-GQGGVRHPVILWGNGTGAGP--STYAGLLSHWASHGFVVAAAETSNAGT-----------------GREM 93 (258)
T ss_dssp EEEEEESST-TGGGCCEEEEEEECCTTCCG--GGGHHHHHHHHHHTCEEEEECCSCCTT-----------------SHHH
T ss_pred EEEEeCCCC-cccCCCceEEEEECCCCCCc--hhHHHHHHHHHhCCeEEEEecCCCCcc-----------------HHHH
Confidence 677888763 21 23789999999987643 345666678899999999999996411 1344
Q ss_pred HHHHHHHHHc---------CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccc
Q 010654 327 IACAEYLIKN---------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 397 (505)
Q Consensus 327 ~~~~~~l~~~---------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 397 (505)
..+++++.+. ..+|.++++++|||+||++++.++ .+.++++++...|.... .
T Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~--------~--------- 154 (258)
T 2fx5_A 94 LACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG--------L--------- 154 (258)
T ss_dssp HHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS--------T---------
T ss_pred HHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc--------c---------
Confidence 5555555542 346778999999999999998887 35688998887763220 0
Q ss_pred cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCCh-HHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 398 WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 398 ~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
+.. ...+.++++| +|++||++|..+|+.. +.++++. .+.++++++++ ++||......
T Consensus 155 ---~~~------------~~~~~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~---g~~H~~~~~~ 212 (258)
T 2fx5_A 155 ---GHD------------SASQRRQQGP-MFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERR---YVSHFEPVGS 212 (258)
T ss_dssp ---TCC------------GGGGGCCSSC-EEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEES---SCCTTSSTTT
T ss_pred ---ccc------------hhhhccCCCC-EEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEEC---CCCCccccch
Confidence 000 1134456777 9999999999999886 7777766 34567888888 8899765433
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 010654 477 FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~ 495 (505)
...+ ...+.+||.++|.
T Consensus 213 ~~~~--~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 213 GGAY--RGPSTAWFRFQLM 229 (258)
T ss_dssp CGGG--HHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHhc
Confidence 3322 3357899998874
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.9e-18 Score=148.12 Aligned_cols=174 Identities=13% Similarity=0.047 Sum_probs=121.3
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
++.|+||++||..+......+......|+++||.|+.+|+||.|..... .......+++.++++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~-------~~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDL-------GQLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGG-------CTTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-------CCCCCHHHHHHHHHHHHHhcC--C
Confidence 4579999999987654332233556788899999999999987654311 111233445555667776653 3
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhccc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVK 420 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~ 420 (505)
.++++++|+|+||.+++.++.++| ++++++.+|..+... +. . ..
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~-------------~~-----~----------------~~ 116 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP-------------LP-----A----------------LD 116 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT-------------BC-----C----------------CC
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc-------------cC-----c----------------cc
Confidence 579999999999999999999887 899998888654311 00 0 34
Q ss_pred CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 421 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 421 ~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+++.| +|++||++|..+|+.++.++++.+ +.+++++ ++||..... .+. ....+.+||.+
T Consensus 117 ~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~----~~~H~~~~~-~~~--~~~~i~~fl~~ 175 (176)
T 2qjw_A 117 AAAVP-ISIVHAWHDELIPAADVIAWAQAR-----SARLLLV----DDGHRLGAH-VQA--ASRAFAELLQS 175 (176)
T ss_dssp CCSSC-EEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE----SSCTTCTTC-HHH--HHHHHHHHHHT
T ss_pred ccCCC-EEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe----CCCcccccc-HHH--HHHHHHHHHHh
Confidence 55676 999999999999999999998887 3566666 358987432 222 22346677653
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-18 Score=160.11 Aligned_cols=242 Identities=12% Similarity=0.076 Sum_probs=149.8
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchh---HHHHHHCCcEEEEEcccCCCCCc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS---RLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~---~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
..+.+++.|. .|..+..+ .|+.. .|+||++||+++......|... .+.++++|++|+.+|.+|++.|.
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~------~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~ 76 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG------PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYT 76 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS------SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTS
T ss_pred eEEEEEEECcccCceeEEE--EcCCC------CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCcccc
Confidence 3455666554 56666654 45543 1589999998531112223221 24567789999999998655442
Q ss_pred hhHHHcccc--cCCcchHHHH--HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKF--LKKKNTFTDF--IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~--~~~~~~~~D~--~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
. +...... ......+.+. .+.+.++.++-.+++++++|+|+||||++++.++.++|++|+++++.+|..++....
T Consensus 77 ~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 155 (280)
T 1dqz_A 77 D-WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESW 155 (280)
T ss_dssp B-CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTT
T ss_pred C-CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcc
Confidence 1 1100000 0012233332 234445544334677899999999999999999999999999999999987643210
Q ss_pred ----cC----CCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCC--------------CCC
Q 010654 384 ----LD----PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDP--------------RVM 439 (505)
Q Consensus 384 ----~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~--------------~vp 439 (505)
.. ..... .....+|.+..+. +.+.+|..++.++ +.+|+++.||+.|. .++
T Consensus 156 ~~~~~~~~~~~~~~~--~~~~~~g~~~~~~----~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~ 229 (280)
T 1dqz_A 156 WPTLIGLAMNDSGGY--NANSMWGPSSDPA----WKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLT 229 (280)
T ss_dssp HHHHHHHHHHHTTSC--CHHHHHCSTTSHH----HHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHH
T ss_pred hhhhHHHHhhhccCc--CHHHhcCCCCchh----hhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHH
Confidence 00 00000 0012245543322 2567887666554 22359999999997 578
Q ss_pred CChHHHHHHHHHhcC-CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 440 YSEPAKFVAKLREMK-TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 440 ~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
..++++++++|+++| +++++.+|+ +++|... .....+...+.||.+.||
T Consensus 230 ~~~~~~~~~~L~~~g~~~~~~~~~~---~g~H~~~----~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 230 LRTNQTFRDTYAADGGRNGVFNFPP---NGTHSWP----YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCS---CCCSSHH----HHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEecC---CCccChH----HHHHHHHHHHHHHHHHhC
Confidence 899999999999999 988777665 6789531 112234456888888775
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=167.95 Aligned_cols=194 Identities=15% Similarity=0.212 Sum_probs=132.9
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch--------------hHHHc----cc------
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR--------------QWYEN----GK------ 315 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~--------------~~~~~----~~------ 315 (505)
+++.|+||++||+.+... .|....+.|+++||+|+.+|+||++.... .|... +.
T Consensus 95 ~~~~P~Vv~~HG~~~~~~--~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 172 (383)
T 3d59_A 95 GEKYPLVVFSHGLGAFRT--LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIR 172 (383)
T ss_dssp SSCEEEEEEECCTTCCTT--TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCCch--HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhh
Confidence 357899999999876543 36667789999999999999999876431 01000 00
Q ss_pred ccCCcchHHHHHHHHHHHHH--------------------cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 316 FLKKKNTFTDFIACAEYLIK--------------------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~--------------------~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
...-....+|+..+++++.+ .+.+|++||+++|||+||++++.++.+.+ +++++|+..|
T Consensus 173 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~ 251 (383)
T 3d59_A 173 NEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDA 251 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCC
Confidence 00001125788899999876 45678899999999999999999988755 7999998877
Q ss_pred chhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCC
Q 010654 376 FVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT 455 (505)
Q Consensus 376 ~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~ 455 (505)
... +. ..+ ...+++.| +|++||++|..+ ...+..++|.+.+.
T Consensus 252 ~~~----------p~------------~~~------------~~~~i~~P-~Lii~g~~D~~~---~~~~~~~~l~~~~~ 293 (383)
T 3d59_A 252 WMF----------PL------------GDE------------VYSRIPQP-LFFINSEYFQYP---ANIIKMKKCYSPDK 293 (383)
T ss_dssp CCT----------TC------------CGG------------GGGSCCSC-EEEEEETTTCCH---HHHHHHHTTCCTTS
T ss_pred ccC----------CC------------chh------------hhccCCCC-EEEEecccccch---hhHHHHHHHHhcCC
Confidence 311 00 000 12355676 999999999754 23344467777778
Q ss_pred CCCeEEEEecCCCCCCCCC--------------------ChHHHHHHH-HHHHHHHHHhhCCC
Q 010654 456 DDNILLFKCELGAGHFSKS--------------------GRFERLREA-AFTYTFLMRALSML 497 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~~--------------------~~~~~~~~~-~~~~~fl~~~l~~~ 497 (505)
+.++++|+ +++|.... +.....+.. ..+++||.++|+..
T Consensus 294 ~~~~~~~~---g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 294 ERKMITIR---GSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp CEEEEEET---TCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ceEEEEeC---CCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 88889998 88997521 122222232 35899999999754
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=153.29 Aligned_cols=190 Identities=14% Similarity=0.051 Sum_probs=119.9
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
|+||++||..++..........+++.++ ||.|+.+|++|+| .+ ..+.++.++.. .++
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g---~~----------------~~~~l~~~~~~--~~~ 61 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYP---AE----------------AAEMLESIVMD--KAG 61 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSH---HH----------------HHHHHHHHHHH--HTT
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCH---HH----------------HHHHHHHHHHh--cCC
Confidence 8999999965443221112223456665 5999999999764 22 12223333322 235
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCC--CCHHHHHHHHhCChhhcc
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP--WKEEFYFYMKSYSPVDNV 419 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~sp~~~~ 419 (505)
++|+|+|+|+||++++.++.++|+...+++...+..+.......... ....+.+ .......... +....+
T Consensus 62 ~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~ 133 (202)
T 4fle_A 62 QSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQ------NPYTGQKYVLESRHIYDLK--AMQIEK 133 (202)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEE------CTTTCCEEEECHHHHHHHH--TTCCSS
T ss_pred CcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhc------cccccccccchHHHHHHHH--hhhhhh
Confidence 79999999999999999999999988888877776654433211000 0001111 1222222222 444556
Q ss_pred cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 420 ~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.++++| +|++||++|.+||++++.++++ ++++++++ |+||.+.. ..+.+ ..+.+||.-..+++
T Consensus 134 ~~~~~P-~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~---g~~H~~~~-~~~~~---~~I~~FL~~a~~l~ 196 (202)
T 4fle_A 134 LESPDL-LWLLQQTGDEVLDYRQAVAYYT-------PCRQTVES---GGNHAFVG-FDHYF---SPIVTFLGLATALE 196 (202)
T ss_dssp CSCGGG-EEEEEETTCSSSCHHHHHHHTT-------TSEEEEES---SCCTTCTT-GGGGH---HHHHHHHTCCCCTT
T ss_pred hccCce-EEEEEeCCCCCCCHHHHHHHhh-------CCEEEEEC---CCCcCCCC-HHHHH---HHHHHHHhhhhhcc
Confidence 677887 9999999999999999988763 45788887 88997642 22323 34788997555544
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=155.42 Aligned_cols=223 Identities=19% Similarity=0.174 Sum_probs=130.0
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
++.+.||.+|..... ++.|.||++||.++... .|......|+++||.|+.+|+||.|.+..... .
T Consensus 2 ~~~~~~g~~l~y~~~---------G~g~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~ 66 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDW---------GSGKPVLFSHGWLLDAD--MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT----G 66 (271)
T ss_dssp EEECTTSCEEEEEEE---------SSSSEEEEECCTTCCGG--GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS----C
T ss_pred eEEcCCCCEEEEEcc---------CCCCeEEEECCCCCcHH--HHHHHHHHHHhCCceEEEecCCCCccCCCCCC----C
Confidence 357789988864421 12366899999876533 36666678888999999999999987643211 0
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh-CCCceeEEEecCCchhhhhhccCCCCCC--Ccc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPL--TTA 393 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~--~~~ 393 (505)
.......+|+.+.++.+ +.+++.++|||+||.+++.+++. .|++++++|..++........ ...+. ...
T Consensus 67 ~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~ 138 (271)
T 3ia2_A 67 NDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQK--PDYPQGVPLD 138 (271)
T ss_dssp CSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCB--TTBTTSBCHH
T ss_pred CCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCC--CCCcccccHH
Confidence 01112234444444443 34689999999999866665554 489999999876543211000 00000 000
Q ss_pred --------------cc-c-----cc----CCCCCHHH-------------------HHHHHhCChhhcccCCCCCeEEEE
Q 010654 394 --------------EW-E-----EW----GDPWKEEF-------------------YFYMKSYSPVDNVKAQNYPHILVT 430 (505)
Q Consensus 394 --------------~~-~-----~~----g~~~~~~~-------------------~~~~~~~sp~~~~~~~~~Pp~Li~ 430 (505)
.+ . .+ +....+.. ...+...+....+.++++| +|++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~Lvi 217 (271)
T 3ia2_A 139 VFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVP-TLVI 217 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSC-EEEE
T ss_pred HHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCC-EEEE
Confidence 00 0 00 00001100 0011112223345678898 9999
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 431 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 431 ~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
||++|..+|+..+.++++.+. ...++.+++ ++||....+.++.+ ...+.+||.
T Consensus 218 ~G~~D~~~p~~~~~~~~~~~~---~~~~~~~~~---~~gH~~~~e~p~~~--~~~i~~Fl~ 270 (271)
T 3ia2_A 218 HGDGDQIVPFETTGKVAAELI---KGAELKVYK---DAPHGFAVTHAQQL--NEDLLAFLK 270 (271)
T ss_dssp EETTCSSSCGGGTHHHHHHHS---TTCEEEEET---TCCTTHHHHTHHHH--HHHHHHHHT
T ss_pred EeCCCCcCChHHHHHHHHHhC---CCceEEEEc---CCCCcccccCHHHH--HHHHHHHhh
Confidence 999999999988666655442 246788888 88997643333333 235677874
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.74 E-value=8.6e-17 Score=150.76 Aligned_cols=224 Identities=18% Similarity=0.193 Sum_probs=130.0
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+++.||.++..... ++.|.||++||.++... .|......|+++||.|+.+|+||+|.+....
T Consensus 3 ~~~~~g~~l~y~~~---------g~~~~vvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~------- 64 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW---------GSGQPIVFSHGWPLNAD--SWESQMIFLAAQGYRVIAHDRRGHGRSSQPW------- 64 (273)
T ss_dssp EECTTSCEEEEEEE---------SCSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-------
T ss_pred EecCCCcEEEEEEc---------CCCCEEEEECCCCCcHH--HHhhHHhhHhhCCcEEEEECCCCCCCCCCCC-------
Confidence 56778888754311 13478999999865433 3666677899999999999999998764311
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCchhhhhhccCCCCCCCcc---
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVDVLTTMLDPTIPLTTA--- 393 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~--- 393 (505)
....++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|..++..................
T Consensus 65 -~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 141 (273)
T 1a8s_A 65 -SGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFD 141 (273)
T ss_dssp -SCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHH
Confidence 112334444333333332 2346899999999999998866665 899999888765321000000000000000
Q ss_pred -----------c-c------cccC-----CCCCHHHH----------------HH---HHhCChhhcccCCCCCeEEEEc
Q 010654 394 -----------E-W------EEWG-----DPWKEEFY----------------FY---MKSYSPVDNVKAQNYPHILVTA 431 (505)
Q Consensus 394 -----------~-~------~~~g-----~~~~~~~~----------------~~---~~~~sp~~~~~~~~~Pp~Li~~ 431 (505)
. + ..++ ....++.. .. +...+....+.++++| +|+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~ 220 (273)
T 1a8s_A 142 GIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVP-TLVVH 220 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSC-EEEEE
T ss_pred HHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCC-EEEEE
Confidence 0 0 0001 00011110 01 1112333445678898 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
|++|..+|+..+.+....+. ...++++++ ++||......++.+ ...+.+||.
T Consensus 221 G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~---~~gH~~~~e~p~~~--~~~i~~fl~ 272 (273)
T 1a8s_A 221 GDADQVVPIEASGIASAALV---KGSTLKIYS---GAPHGLTDTHKDQL--NADLLAFIK 272 (273)
T ss_dssp ETTCSSSCSTTTHHHHHHHS---TTCEEEEET---TCCSCHHHHTHHHH--HHHHHHHHH
T ss_pred CCCCccCChHHHHHHHHHhC---CCcEEEEeC---CCCCcchhhCHHHH--HHHHHHHHh
Confidence 99999999986555444332 246778887 88997543333332 234677874
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-17 Score=152.02 Aligned_cols=227 Identities=12% Similarity=0.095 Sum_probs=137.1
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCC-chhHHHHHHCCcEEEEEcccCCCCCchhHHHccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF-NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 315 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~-~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~ 315 (505)
+...+|..+ .++.|.+ ++.|+||++|||...... ..+ ......+++.||.|+.+|||+.++. .|
T Consensus 9 ~~~~~~~~~--~~y~p~~-----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~----- 74 (274)
T 2qru_A 9 QTLANGATV--TIYPTTT-----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--KI----- 74 (274)
T ss_dssp EECTTSCEE--EEECCSS-----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS--CH-----
T ss_pred ccccCCeeE--EEEcCCC-----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC--CC-----
Confidence 344567555 4455532 457999999998743322 223 2334567778999999999987643 12
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh---hCCCceeEEEecCCchhhhhhccCC--CCCC
Q 010654 316 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN---MRPDLFKAAVAAVPFVDVLTTMLDP--TIPL 390 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~---~~p~~~~a~v~~~~~~d~~~~~~~~--~~~~ 390 (505)
...++|+.++++|+.++.. +++||+|+|+|+||.+++.++. ..+.++++++..+|..|........ ..+.
T Consensus 75 ----p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~ 149 (274)
T 2qru_A 75 ----DHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQA 149 (274)
T ss_dssp ----HHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSC
T ss_pred ----cHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhcccc
Confidence 2568999999999998743 2789999999999999999887 3466788888888877621100000 0110
Q ss_pred Ccccc-ccc-------CCC-C-CHHH---------HHHHHhC-C-------hh--hcccCCCCCeEEEEccCCCCCCCCC
Q 010654 391 TTAEW-EEW-------GDP-W-KEEF---------YFYMKSY-S-------PV--DNVKAQNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 391 ~~~~~-~~~-------g~~-~-~~~~---------~~~~~~~-s-------p~--~~~~~~~~Pp~Li~~G~~D~~vp~~ 441 (505)
..... ... ... . .... +..+... . ++ .... +.||+||++|+.|+.++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~lpP~li~~G~~D~~~~~~ 227 (274)
T 2qru_A 150 ISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLK--TFPPCFSTASSSDEEVPFR 227 (274)
T ss_dssp CCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHH--TSCCEEEEEETTCSSSCTH
T ss_pred ccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhc--CCCCEEEEEecCCCCcCHH
Confidence 00000 000 000 0 0000 0000000 0 00 0112 3467999999999999987
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC--hHHHHHHHHHHHHHHHH
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG--RFERLREAAFTYTFLMR 492 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~ 492 (505)
+++++++++ .++++++|+ +.+|++... .+...+....+.+||.+
T Consensus 228 ~~~~l~~~~----~~~~l~~~~---g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 228 YSKKIGRTI----PESTFKAVY---YLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHHHHHHHS----TTCEEEEEC---SCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhC----CCcEEEEcC---CCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 776666554 467889998 889986321 12223335567888864
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-16 Score=146.61 Aligned_cols=224 Identities=15% Similarity=0.161 Sum_probs=131.7
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+++.||.+|..... ++.|.||++||.++... .|......|+++||.|+.+|+||+|.+....
T Consensus 3 ~~~~~g~~l~y~~~---------g~g~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------- 64 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW---------GQGRPVVFIHGWPLNGD--AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW------- 64 (274)
T ss_dssp EECTTSCEEEEEEE---------CSSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-------
T ss_pred EEccCCCEEEEEec---------CCCceEEEECCCcchHH--HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCC-------
Confidence 46778888754311 13478999999865433 3666667889999999999999998764311
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCchhhhhhccCCCCCCCcc---
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVDVLTTMLDPTIPLTTA--- 393 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~--- 393 (505)
....++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|..++..................
T Consensus 65 -~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 141 (274)
T 1a8q_A 65 -DGYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFD 141 (274)
T ss_dssp -SCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHH
Confidence 112334444333333332 1236899999999999998876665 999999988775321100000000000000
Q ss_pred ---------------cc--cccC-----CCCCHHH----------------HH---HHHhCChhhcccCCCCCeEEEEcc
Q 010654 394 ---------------EW--EEWG-----DPWKEEF----------------YF---YMKSYSPVDNVKAQNYPHILVTAG 432 (505)
Q Consensus 394 ---------------~~--~~~g-----~~~~~~~----------------~~---~~~~~sp~~~~~~~~~Pp~Li~~G 432 (505)
.+ ..++ ....++. +. .+...+....+.++++| +|+++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G 220 (274)
T 1a8q_A 142 ALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIP-TLVVHG 220 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSC-EEEEEE
T ss_pred HHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCC-EEEEec
Confidence 00 0001 0001111 00 11112333456778998 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC--hHHHHHHHHHHHHHHH
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG--RFERLREAAFTYTFLM 491 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~ 491 (505)
++|..+|+..+.+....+ ....++++++ ++||....+ .++.+. ..+.+||.
T Consensus 221 ~~D~~~~~~~~~~~~~~~---~~~~~~~~~~---~~gH~~~~e~~~p~~~~--~~i~~fl~ 273 (274)
T 1a8q_A 221 DDDQVVPIDATGRKSAQI---IPNAELKVYE---GSSHGIAMVPGDKEKFN--RDLLEFLN 273 (274)
T ss_dssp TTCSSSCGGGTHHHHHHH---STTCEEEEET---TCCTTTTTSTTHHHHHH--HHHHHHHT
T ss_pred CcCCCCCcHHHHHHHHhh---CCCceEEEEC---CCCCceecccCCHHHHH--HHHHHHhc
Confidence 999999988655444333 2246778887 889987655 554433 35677874
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.4e-17 Score=147.63 Aligned_cols=213 Identities=13% Similarity=0.114 Sum_probs=130.6
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH--CCcEEEEEcccCCC------
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD--RGFIFAIAQIRGGG------ 304 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~------ 304 (505)
.+.+.|.+ ..+...++.|+. ...++||++||...... .+......|.. .++.++.|+-+-..
T Consensus 15 ~~~~~~~~---~~l~y~ii~P~~-----~~~~~VI~LHG~G~~~~--dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~ 84 (246)
T 4f21_A 15 TENLYFQS---NAMNYELMEPAK-----QARFCVIWLHGLGADGH--DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMG 84 (246)
T ss_dssp -----------CCCCEEEECCSS-----CCCEEEEEEEC--CCCC--CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHH
T ss_pred cceEEEec---CCcCceEeCCCC-----cCCeEEEEEcCCCCCHH--HHHHHHHHhhhcCCCeEEEeCCCCccccccCCC
Confidence 34444444 346667677754 24579999999654332 23333333332 36788888753221
Q ss_pred CCchhHHHccccc-------CCcchHHH----HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 305 ELGRQWYENGKFL-------KKKNTFTD----FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 305 ~~g~~~~~~~~~~-------~~~~~~~D----~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
..+..|....... .-...+.. +...++...+. .+|++||+++|+|+||.+++.++.++|+.|+++++.
T Consensus 85 ~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~ 163 (246)
T 4f21_A 85 MQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMAL 163 (246)
T ss_dssp HHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEE
T ss_pred CCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceeh
Confidence 1122333211100 00111222 23333333344 489999999999999999999999999999999999
Q ss_pred CCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 374 VPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 374 ~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
+|.......+.. ..++ ...++| +|++||+.|++||++.++++++.|+++
T Consensus 164 sG~lp~~~~~~~--------------------------~~~~----~~~~~P-vl~~HG~~D~vVp~~~~~~~~~~L~~~ 212 (246)
T 4f21_A 164 STYLPAWDNFKG--------------------------KITS----INKGLP-ILVCHGTDDQVLPEVLGHDLSDKLKVS 212 (246)
T ss_dssp SCCCTTHHHHST--------------------------TCCG----GGTTCC-EEEEEETTCSSSCHHHHHHHHHHHHTT
T ss_pred hhccCccccccc--------------------------cccc----cccCCc-hhhcccCCCCccCHHHHHHHHHHHHHC
Confidence 885432111100 0011 012455 999999999999999999999999999
Q ss_pred CCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 454 KTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 454 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|.++++..|+ +.||... .+ ++..+.+||.+.|+.
T Consensus 213 g~~v~~~~y~---g~gH~i~---~~---~l~~~~~fL~k~l~l 246 (246)
T 4f21_A 213 GFANEYKHYV---GMQHSVC---ME---EIKDISNFIAKTFKI 246 (246)
T ss_dssp TCCEEEEEES---SCCSSCC---HH---HHHHHHHHHHHHTTC
T ss_pred CCCeEEEEEC---CCCCccC---HH---HHHHHHHHHHHHhCC
Confidence 9999999998 7899764 22 344588999999863
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=160.58 Aligned_cols=223 Identities=14% Similarity=0.133 Sum_probs=137.1
Q ss_pred CCcEEEEEcCCCCcCCCC-----------CCchhH---HHHHHCCcEEEEEcccC--CCCCchhHHHcc--c---ccCCc
Q 010654 262 SDPLLLYGYGSYEICNDP-----------AFNSSR---LSLLDRGFIFAIAQIRG--GGELGRQWYENG--K---FLKKK 320 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~-----------~~~~~~---~~l~~~G~~v~~~d~rG--~~~~g~~~~~~~--~---~~~~~ 320 (505)
+.|+||++||.++..... .|.... ..|+++||.|+.+|+|| .|..+..-.... . .....
T Consensus 45 ~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~ 124 (366)
T 2pl5_A 45 KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPF 124 (366)
T ss_dssp SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCC
T ss_pred CCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCc
Confidence 358999999987665421 344333 23567899999999999 565432110000 0 00012
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcE-EEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-----------cc----
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-----------ML---- 384 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-----------~~---- 384 (505)
..++++.+.+..+++.- +.+++ .++|||+||.+++.++.++|++++++|+.+|....... +.
T Consensus 125 ~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (366)
T 2pl5_A 125 VSIQDMVKAQKLLVESL--GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPN 202 (366)
T ss_dssp CCHHHHHHHHHHHHHHT--TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTT
T ss_pred ccHHHHHHHHHHHHHHc--CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcc
Confidence 35667666666666542 34688 79999999999999999999999999988875432100 00
Q ss_pred ------------------------------------CCCCC--------CCcccccc-----cCCCCCHHH----HHHHH
Q 010654 385 ------------------------------------DPTIP--------LTTAEWEE-----WGDPWKEEF----YFYMK 411 (505)
Q Consensus 385 ------------------------------------~~~~~--------~~~~~~~~-----~g~~~~~~~----~~~~~ 411 (505)
..... .....+.. +.....+.. +..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (366)
T 2pl5_A 203 WKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALD 282 (366)
T ss_dssp CGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHH
T ss_pred cccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhh
Confidence 00000 00000000 000011211 12222
Q ss_pred hCCh------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE-EecCCCCCCCCCChHHHHHHHH
Q 010654 412 SYSP------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF-KCELGAGHFSKSGRFERLREAA 484 (505)
Q Consensus 412 ~~sp------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~-~~~~~~gH~~~~~~~~~~~~~~ 484 (505)
..+. ...+.++++| +|+++|++|..+|+..+.++++.+...+...+++++ + ++||......++.+. .
T Consensus 283 ~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~gH~~~~e~p~~~~--~ 356 (366)
T 2pl5_A 283 HYSLGKGKELTAALSNATCR-FLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQS---GEGHDSFLLKNPKQI--E 356 (366)
T ss_dssp HCBCCSHHHHHHHHTTCCSE-EEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECC---CBSSGGGGSCCHHHH--H
T ss_pred hhccccccchhhhhccCCCC-EEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCC---CCCcchhhcChhHHH--H
Confidence 2222 2256777887 999999999999999999999999987766778888 7 789976544444332 3
Q ss_pred HHHHHHHH
Q 010654 485 FTYTFLMR 492 (505)
Q Consensus 485 ~~~~fl~~ 492 (505)
.+.+||.+
T Consensus 357 ~i~~fl~~ 364 (366)
T 2pl5_A 357 ILKGFLEN 364 (366)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcc
Confidence 57788865
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-17 Score=153.72 Aligned_cols=224 Identities=11% Similarity=0.050 Sum_probs=138.8
Q ss_pred eEEEEEEECCC-CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCC---
Q 010654 232 FTERKWASASD-GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGEL--- 306 (505)
Q Consensus 232 ~~~~~~~~s~d-G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~--- 306 (505)
..+.+++.|.+ |..+.++++.|+++ .+.+++|+|++.||+...... .....+.+++ .+.+|+.+++++...+
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y-~~~~~yPvly~l~G~~~~~~~--~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~ 88 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTT-APASGYPILYMLDGNAVMDRL--DDELLKQLSEKTPPVIVAVGYQTNLPFDLN 88 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSC-CCTTCEEEEEESSHHHHHHHC--CHHHHHHHTTSCCCEEEEEEESSSSSCCHH
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCC-CCCCCCCEEEEeeChhHHHHH--HHHHHHHhccCCCeEEEEEcCCCCCcCccc
Confidence 56778888876 67899999999998 666789988777775421100 1122345555 6888888888764321
Q ss_pred --chhHHHcc-c-----------ccCC-cchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeE
Q 010654 307 --GRQWYENG-K-----------FLKK-KNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA 369 (505)
Q Consensus 307 --g~~~~~~~-~-----------~~~~-~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a 369 (505)
+.++.... . ...+ ...+.+.+ ..+.++.++..+|++|++|+|+||||++++.++.+ |++|++
T Consensus 89 ~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~ 167 (278)
T 2gzs_A 89 SRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRS 167 (278)
T ss_dssp HHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSE
T ss_pred ccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCe
Confidence 11221100 0 0001 11222222 12233444455888999999999999999999999 999999
Q ss_pred EEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCC--------CCC
Q 010654 370 AVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRV--------MYS 441 (505)
Q Consensus 370 ~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~v--------p~~ 441 (505)
+++.+|...+... .....+..+.+. ..+.+++++.||+.|..+ +..
T Consensus 168 ~~~~s~~~~~~~~----------------------~~~~~~~~~~~~----~~~~~~i~l~~G~~d~~~~~~~~~~~~~~ 221 (278)
T 2gzs_A 168 YYSASPSLGRGYD----------------------ALLSRVTAVEPL----QFCTKHLAIMEGSATQGDNRETHAVGVLS 221 (278)
T ss_dssp EEEESGGGSTTHH----------------------HHHHHHHTSCTT----TTTTCEEEEEECCC-----------CHHH
T ss_pred EEEeCcchhcCcc----------------------hHHHHHHHhhcc----CCCCCcEEEEecCccccccccchhhhhHH
Confidence 9999996533210 011111212110 112336999999999874 478
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++++++++|+++|+++++.+|+ +++|+. ..+..+...+.||.++
T Consensus 222 ~~~~~~~~L~~~g~~~~~~~~~---g~~H~~-----~~~~~~~~~l~fl~~~ 265 (278)
T 2gzs_A 222 KIHTTLTILKDKGVNAVFWDFP---NLGHGP-----MFNASFRQALLDISGE 265 (278)
T ss_dssp HHHHHHHHHHHTTCCEEEEECT---TCCHHH-----HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCeeEEEEcC---CCCccc-----hhHHHHHHHHHHHhhC
Confidence 9999999999999999888887 778852 1222333456677653
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=164.06 Aligned_cols=224 Identities=13% Similarity=0.066 Sum_probs=145.8
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcE----EEEEcccCCCCC
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI----FAIAQIRGGGEL 306 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~----v~~~d~rG~~~~ 306 (505)
..+.+++.|. .|..+.++++.|++. . .+++|+|+++||+...... .+......|+++|++ |+.+|++|+.+.
T Consensus 167 ~v~~~~~~S~~~g~~~~~~vy~P~~~-~-~~~~PvlvllHG~~~~~~~-~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r 243 (403)
T 3c8d_A 167 PAKEIIWKSERLKNSRRVWIFTTGDV-T-AEERPLAVLLDGEFWAQSM-PVWPVLTSLTHRQQLPPAVYVLIDAIDTTHR 243 (403)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC-------CCCCEEEESSHHHHHHTS-CCHHHHHHHHHTTSSCSCEEEEECCCSHHHH
T ss_pred ceEEEEEEccccCCcEEEEEEeCCCC-C-CCCCCEEEEeCCHHHhhcC-cHHHHHHHHHHcCCCCCeEEEEECCCCCccc
Confidence 4566777664 677888999999875 3 5679999999996432111 233445788888875 999999863221
Q ss_pred chhHHHcccccCCcchHHHHH--HHHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 307 GRQWYENGKFLKKKNTFTDFI--ACAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~--~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
..++ .....+.+.. +++.++.++. ..|+++++|+|+||||++++.++.++|++|+++++.+|.+++...
T Consensus 244 ~~~~-------~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~ 316 (403)
T 3c8d_A 244 AHEL-------PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 316 (403)
T ss_dssp HHHS-------SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred cccC-------CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCC
Confidence 1111 1122334432 4666776642 368899999999999999999999999999999999998754221
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 383 MLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 383 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
. .+.+....+.+.. .+ ...... +++|+||+.|..+ ..++++++++|+++|+++++..|
T Consensus 317 ----~------------~~~~~~~~~~~~~-~~---~~~~~~-~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~ 374 (403)
T 3c8d_A 317 ----G------------GQQEGVLLEKLKA-GE---VSAEGL-RIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQV 374 (403)
T ss_dssp ----T------------SSSCCHHHHHHHT-TS---SCCCSC-EEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEE
T ss_pred ----C------------CCcHHHHHHHHHh-cc---ccCCCc-eEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEe
Confidence 0 0001111222221 11 122234 5999999998654 57899999999999999999888
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 463 KCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+ | +|.. ......+...+.||.+.+.
T Consensus 375 ~---G-gH~~----~~w~~~l~~~l~~l~~~~~ 399 (403)
T 3c8d_A 375 D---G-GHDA----LCWRGGLMQGLIDLWQPLF 399 (403)
T ss_dssp S---C-CSCH----HHHHHHHHHHHHHHHGGGT
T ss_pred C---C-CCCH----HHHHHHHHHHHHHHhcccc
Confidence 7 6 6863 1112334456788877653
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.4e-17 Score=156.18 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=134.8
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-------hhHHHHHHCCcEEEEEcccCCCCCchhHHHcc---
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-------SSRLSLLDRGFIFAIAQIRGGGELGRQWYENG--- 314 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-------~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~--- 314 (505)
.+.+..+.|.+. +.|.||++||+..... .|. .....|+++||.|+.+|+||.|..+.......
T Consensus 49 ~~~~~~~~p~~~-----~~~~vvl~HG~g~~~~--~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~ 121 (328)
T 1qlw_A 49 QMYVRYQIPQRA-----KRYPITLIHGCCLTGM--TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVK 121 (328)
T ss_dssp CEEEEEEEETTC-----CSSCEEEECCTTCCGG--GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHH
T ss_pred eEEEEEEccCCC-----CCccEEEEeCCCCCCC--ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccc
Confidence 354554556532 2367999999864432 233 35678899999999999999887653211100
Q ss_pred -------------------------cc-cCC---------cchHHH------------------HHHHHHHHHHcCCCCC
Q 010654 315 -------------------------KF-LKK---------KNTFTD------------------FIACAEYLIKNCYCTK 341 (505)
Q Consensus 315 -------------------------~~-~~~---------~~~~~D------------------~~~~~~~l~~~~~~d~ 341 (505)
.. .+. ...+++ +.+++..++++-
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---- 197 (328)
T 1qlw_A 122 LGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL---- 197 (328)
T ss_dssp TTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----
T ss_pred ccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----
Confidence 00 000 000222 445555555431
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
+++.++|||+||.+++.++.++|++++++|+..|... . ++......
T Consensus 198 ~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~---------~-------------------------~~~~~~~~ 243 (328)
T 1qlw_A 198 DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC---------P-------------------------KPEDVKPL 243 (328)
T ss_dssp TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC---------C-------------------------CGGGCGGG
T ss_pred CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC---------C-------------------------CHHHHhhc
Confidence 3899999999999999999999999999999887430 0 00111122
Q ss_pred CCCCeEEEEccCCCCCCCC-----ChHHHHHHHHHhcCCCCCeEEEEecC--CCCCCCCCCh-HHHHHHHHHHHHHHHHh
Q 010654 422 QNYPHILVTAGLNDPRVMY-----SEPAKFVAKLREMKTDDNILLFKCEL--GAGHFSKSGR-FERLREAAFTYTFLMRA 493 (505)
Q Consensus 422 ~~~Pp~Li~~G~~D~~vp~-----~~~~~~~~~L~~~~~~~~~~~~~~~~--~~gH~~~~~~-~~~~~~~~~~~~fl~~~ 493 (505)
+++| +|++||++|..+|+ .+++++++.++++|.+++++.++... |.+|....+. ... ....+.+||.++
T Consensus 244 ~~~P-vLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~--~~~~i~~fl~~~ 320 (328)
T 1qlw_A 244 TSIP-VLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQ--VADLILDWIGRN 320 (328)
T ss_dssp TTSC-EEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHH--HHHHHHHHHHHT
T ss_pred cCCC-EEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHH--HHHHHHHHHHhc
Confidence 3566 99999999999997 89999999999999899988888431 2238754333 332 334688999988
Q ss_pred hC
Q 010654 494 LS 495 (505)
Q Consensus 494 l~ 495 (505)
+.
T Consensus 321 ~~ 322 (328)
T 1qlw_A 321 TA 322 (328)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=148.92 Aligned_cols=226 Identities=20% Similarity=0.192 Sum_probs=129.5
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+.+.||.+|.....-| .+.|.||++||.+.... .|......|+++||.|+.+|+||+|.+.... ...
T Consensus 3 ~~~~~g~~l~y~~~g~-------~~~~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~ 69 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGP-------RDGLPVVFHHGWPLSAD--DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS----TGH 69 (275)
T ss_dssp EECTTSCEEEEEEESC-------TTSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCC
T ss_pred EEccCCCEEEEEEcCC-------CCCceEEEECCCCCchh--hHHHHHHHHHHCCceEEEEcCCcCCCCCCCC----CCC
Confidence 4677898886542211 13478999999765433 3666677899999999999999998764311 000
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCchhhhhhccC--CCCCCC---
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVDVLTTMLD--PTIPLT--- 391 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~--~~~~~~--- 391 (505)
......+|+.+.++.+ +.+++.++|||+||.+++.+++++ |++++++|..++.......... ...+..
T Consensus 70 ~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 1a88_A 70 DMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFD 143 (275)
T ss_dssp SHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHH
T ss_pred CHHHHHHHHHHHHHHc------CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHH
Confidence 1112234444444443 235899999999999998877766 9999999887753211000000 000000
Q ss_pred ---------c-ccc------cccC-----CCCCHHHHH----------------H---HHhCChhhcccCCCCCeEEEEc
Q 010654 392 ---------T-AEW------EEWG-----DPWKEEFYF----------------Y---MKSYSPVDNVKAQNYPHILVTA 431 (505)
Q Consensus 392 ---------~-~~~------~~~g-----~~~~~~~~~----------------~---~~~~sp~~~~~~~~~Pp~Li~~ 431 (505)
. ..+ ..++ ....++... . +...+....+.++++| +|+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~ 222 (275)
T 1a88_A 144 EFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP-VLVAH 222 (275)
T ss_dssp HHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSC-EEEEE
T ss_pred HHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCC-EEEEe
Confidence 0 000 0001 001111110 0 1112223345677898 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
|++|..+|+..+.+....+. ...++++++ ++||....+.++.+ ...+.+||.
T Consensus 223 G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~---~~gH~~~~e~p~~~--~~~i~~fl~ 274 (275)
T 1a88_A 223 GTDDQVVPYADAAPKSAELL---ANATLKSYE---GLPHGMLSTHPEVL--NPDLLAFVK 274 (275)
T ss_dssp ETTCSSSCSTTTHHHHHHHS---TTEEEEEET---TCCTTHHHHCHHHH--HHHHHHHHH
T ss_pred cCCCccCCcHHHHHHHHhhC---CCcEEEEcC---CCCccHHHhCHHHH--HHHHHHHhh
Confidence 99999999986554443332 245677887 88997543333332 234677874
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-16 Score=159.09 Aligned_cols=231 Identities=16% Similarity=0.102 Sum_probs=140.4
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
..+.+.+.||.++... .. ++.|+||++||+++... .|......|+++||.|+.+|+||.|.......
T Consensus 4 i~~~~~~~dG~~l~y~---~~------G~gp~VV~lHG~~~~~~--~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~-- 70 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYE---DH------GTGVPVVLIHGFPLSGH--SWERQSAALLDAGYRVITYDRRGFGQSSQPTT-- 70 (456)
T ss_dssp EEEEEETTEEEEEEEE---EE------SSSEEEEEECCTTCCGG--GGTTHHHHHHHHTEEEEEECCTTSTTSCCCSS--
T ss_pred EeecccccCCeEEEEE---Ee------CCCCEEEEECCCCCcHH--HHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC--
Confidence 3455677788777533 11 23589999999876543 35566788889999999999999987643210
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
........+|+.++++++ +.+++.++|+|+||++++.+++.+ |++++++|+.+|.................
T Consensus 71 --~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 142 (456)
T 3vdx_A 71 --GYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAP 142 (456)
T ss_dssp --CCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBC
T ss_pred --CCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccch
Confidence 011112344555555554 346899999999999888887776 89999999998865422110000000000
Q ss_pred c---------------c-----ccc-c------CCCCCHHHHHHH----H--------------hCChhhcccCCCCCeE
Q 010654 393 A---------------E-----WEE-W------GDPWKEEFYFYM----K--------------SYSPVDNVKAQNYPHI 427 (505)
Q Consensus 393 ~---------------~-----~~~-~------g~~~~~~~~~~~----~--------------~~sp~~~~~~~~~Pp~ 427 (505)
. . +.. + ......+..... . ..+....+.++++| +
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P-v 221 (456)
T 3vdx_A 143 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVP-A 221 (456)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSC-C
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCC-E
Confidence 0 0 000 0 001111111100 0 11233446677888 9
Q ss_pred EEEccCCCCCCCCCh-HHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 428 LVTAGLNDPRVMYSE-PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 428 Li~~G~~D~~vp~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
|+++|+.|..+|+.+ ...+.+.+ .++++++++ ++||......++.+ ...+.+||.++++
T Consensus 222 LiI~G~~D~~vp~~~~~~~l~~~~----~~~~~~~i~---gagH~~~~e~p~~v--~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 222 LILHGTGDRTLPIENTARVFHKAL----PSAEYVEVE---GAPHGLLWTHAEEV--NTALLAFLAKALE 281 (456)
T ss_dssp EEEEETTCSSSCGGGTHHHHHHHC----TTSEEEEET---TCCSCTTTTTHHHH--HHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHC----CCceEEEeC---CCCCcchhhCHHHH--HHHHHHHHHHhhc
Confidence 999999999999984 44443332 356788887 88998765555443 3357889988763
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-18 Score=157.50 Aligned_cols=212 Identities=12% Similarity=0.068 Sum_probs=129.0
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|+||++||.++... .|......|++ ||.|+.+|+||.|....... .......++++.+.+..+++.- +.
T Consensus 19 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQS--AWNRILPFFLR-DYRVVLYDLVCAGSVNPDFF----DFRRYTTLDPYVDDLLHILDAL--GI 89 (269)
T ss_dssp CSSEEEEECCTTCCGG--GGTTTGGGGTT-TCEEEEECCTTSTTSCGGGC----CTTTCSSSHHHHHHHHHHHHHT--TC
T ss_pred CCCEEEEEeCCCCcHH--HHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCC----CccccCcHHHHHHHHHHHHHhc--CC
Confidence 4589999999865433 34445566766 99999999999987644211 0111123445554444444432 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc--------------cccc------ccCCC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT--------------AEWE------EWGDP 401 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--------------~~~~------~~g~~ 401 (505)
+++.++|||+||++++.++.++|++++++|..+|.......... ...+.. ..+. ..+..
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDY-HGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGAD 168 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTB-CCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSS
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHh-ccccchHHHHHHHHhccccHHHHHHHhhhhhccCC
Confidence 68999999999999999999999999999999885432110000 000000 0000 00100
Q ss_pred CC------------------HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 402 WK------------------EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 402 ~~------------------~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
.. ......+...+....+.++++| +|+++|++|..+|+..+.++++.+... +++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~ 244 (269)
T 4dnp_A 169 VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVP-CHIFQTARDHSVPASVATYLKNHLGGK---NTVHWLN 244 (269)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSC-EEEEEEESBTTBCHHHHHHHHHHSSSC---EEEEEEE
T ss_pred ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCC-EEEEecCCCcccCHHHHHHHHHhCCCC---ceEEEeC
Confidence 00 0011112233445567778898 999999999999999888887776432 5778888
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 464 CELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 464 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++||......++.+ ...+.+||.+
T Consensus 245 ---~~gH~~~~~~p~~~--~~~i~~fl~~ 268 (269)
T 4dnp_A 245 ---IEGHLPHLSAPTLL--AQELRRALSH 268 (269)
T ss_dssp ---EESSCHHHHCHHHH--HHHHHHHHC-
T ss_pred ---CCCCCccccCHHHH--HHHHHHHHhh
Confidence 67997543333322 2246777754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-16 Score=155.76 Aligned_cols=248 Identities=13% Similarity=0.084 Sum_probs=152.2
Q ss_pred CceEEEEEEECCC--Cce--eeEEEEEeCCccCCCCCCcEEEEEcCCCCcC--CCCC----------------Cc-hhHH
Q 010654 230 NYFTERKWASASD--GTQ--IPICIVYRKNLVKLDGSDPLLLYGYGSYEIC--NDPA----------------FN-SSRL 286 (505)
Q Consensus 230 ~~~~~~~~~~s~d--G~~--i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~--~~~~----------------~~-~~~~ 286 (505)
.....++.|.|.| |.. +.+.++.|.+. . .+.|+|.+.||..+.. ..++ +. ....
T Consensus 72 ~~~a~ri~Y~std~~G~p~~~~gtv~~P~~~-~--~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~ 148 (462)
T 3guu_A 72 NAASFQLQYRTTNTQNEAVADVATVWIPAKP-A--SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIII 148 (462)
T ss_dssp TCEEEEEEEEEECTTSCEEEEEEEEEECSSC-C--SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHH
T ss_pred CceEEEEEEEEECCCCCEEEEEEEEEecCCC-C--CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHH
Confidence 3466777776654 543 66788999875 2 3589999999965321 1111 11 1235
Q ss_pred HH-HHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC-
Q 010654 287 SL-LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP- 364 (505)
Q Consensus 287 ~l-~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p- 364 (505)
.| +++||+|+.+||+|.|. .|.. .......+.|...++..+. +.-...|++++|+|+||..+++++...|
T Consensus 149 ~~~l~~G~~Vv~~Dy~G~G~---~y~~---~~~~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~ 220 (462)
T 3guu_A 149 GWALQQGYYVVSSDHEGFKA---AFIA---GYEEGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAES 220 (462)
T ss_dssp HHHHHTTCEEEEECTTTTTT---CTTC---HHHHHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEecCCCCCC---cccC---CcchhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChh
Confidence 67 89999999999999875 2211 0000122344444444443 3223479999999999999998877543
Q ss_pred ---C-ceeEEEecCCchhhhhhcc--CCCC----------------C-----------------------C--C------
Q 010654 365 ---D-LFKAAVAAVPFVDVLTTML--DPTI----------------P-----------------------L--T------ 391 (505)
Q Consensus 365 ---~-~~~a~v~~~~~~d~~~~~~--~~~~----------------~-----------------------~--~------ 391 (505)
+ .++++++.++..|+..... +... | . .
T Consensus 221 yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~ 300 (462)
T 3guu_A 221 YAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVL 300 (462)
T ss_dssp HCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHH
T ss_pred hcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHH
Confidence 3 4788888877666433210 0000 0 0 0
Q ss_pred ---ccccccc--C-CC-CCHHHHHHHHhCChhh-----cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 392 ---TAEWEEW--G-DP-WKEEFYFYMKSYSPVD-----NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 392 ---~~~~~~~--g-~~-~~~~~~~~~~~~sp~~-----~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
......+ + .+ .++...+.+.+.+.-. -..+.+.| +||+||.+|++||+.++++++++++++|.++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~P-vlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~ 379 (462)
T 3guu_A 301 TYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFP-RFIWHAIPDEIVPYQPAATYVKEQCAKGANINF 379 (462)
T ss_dssp HCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSE-EEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCC-EEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEE
Confidence 0000000 1 11 1233333344333211 12244665 999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
..|+ +.+|... ........++||.++|...
T Consensus 380 ~~y~---~~~H~~~-----~~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 380 SPYP---IAEHLTA-----EIFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp EEES---SCCHHHH-----HHHTHHHHHHHHHHHHHTC
T ss_pred EEEC---cCCccCc-----hhhhHHHHHHHHHHHhCCC
Confidence 9998 7799532 1223556899999998544
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.8e-17 Score=151.02 Aligned_cols=215 Identities=16% Similarity=0.119 Sum_probs=134.6
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
.+.+.||.++.... . ++.|+||++||+++... .|......|+ +||.|+.+|+||.|.....
T Consensus 6 ~~~~~~g~~l~~~~-~--------g~~~~vv~lHG~~~~~~--~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~------- 66 (262)
T 3r0v_A 6 TVPSSDGTPIAFER-S--------GSGPPVVLVGGALSTRA--GGAPLAERLA-PHFTVICYDRRGRGDSGDT------- 66 (262)
T ss_dssp EEECTTSCEEEEEE-E--------ECSSEEEEECCTTCCGG--GGHHHHHHHT-TTSEEEEECCTTSTTCCCC-------
T ss_pred eEEcCCCcEEEEEE-c--------CCCCcEEEECCCCcChH--HHHHHHHHHh-cCcEEEEEecCCCcCCCCC-------
Confidence 35678898886542 1 12478999999876543 3555556666 8999999999998875432
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC------
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL------ 390 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~------ 390 (505)
....++++.+.+..+++.- + +++.++|+|+||.+++.++.++| ++++++..+|...............
T Consensus 67 --~~~~~~~~~~~~~~~~~~l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 140 (262)
T 3r0v_A 67 --PPYAVEREIEDLAAIIDAA--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDA 140 (262)
T ss_dssp --SSCCHHHHHHHHHHHHHHT--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHhc--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHH
Confidence 1234555555555554432 3 68999999999999999999999 9999999888654321110000000
Q ss_pred -----Ccc----cc-cc-cCCCCCHHHHHHHHh------------------------CChhhcccCCCCCeEEEEccCCC
Q 010654 391 -----TTA----EW-EE-WGDPWKEEFYFYMKS------------------------YSPVDNVKAQNYPHILVTAGLND 435 (505)
Q Consensus 391 -----~~~----~~-~~-~g~~~~~~~~~~~~~------------------------~sp~~~~~~~~~Pp~Li~~G~~D 435 (505)
... .+ .. .+. .++..+.+.. ..+...+.++++| +|+++|++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D 217 (262)
T 3r0v_A 141 LLAEGRRGDAVTYFMTEGVGV--PPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIP-TLVMDGGAS 217 (262)
T ss_dssp HHHTTCHHHHHHHHHHHTSCC--CHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSC-EEEEECTTC
T ss_pred HhhccchhhHHHHHhhcccCC--CHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCC-EEEEeecCC
Confidence 000 00 00 011 1111111111 1234556777898 999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
..+|++.+.++++.+.. .++++++ ++||. ..++.+ ...+.+||.
T Consensus 218 ~~~~~~~~~~~~~~~~~----~~~~~~~---~~gH~---~~p~~~--~~~i~~fl~ 261 (262)
T 3r0v_A 218 PAWIRHTAQELADTIPN----ARYVTLE---NQTHT---VAPDAI--APVLVEFFT 261 (262)
T ss_dssp CHHHHHHHHHHHHHSTT----EEEEECC---CSSSS---CCHHHH--HHHHHHHHC
T ss_pred CCCCHHHHHHHHHhCCC----CeEEEec---CCCcc---cCHHHH--HHHHHHHHh
Confidence 99999888888877643 4677777 78993 233333 234677875
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-17 Score=161.03 Aligned_cols=255 Identities=14% Similarity=0.114 Sum_probs=148.8
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC----------CC-CchhH---HHHHHCCcEEEEE
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND----------PA-FNSSR---LSLLDRGFIFAIA 298 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~----------~~-~~~~~---~~l~~~G~~v~~~ 298 (505)
.+.-.++..+|..+...+.+.........+.|+||++||.+++... .. |.... ..|.++||.|+.+
T Consensus 12 ~~~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~ 91 (377)
T 3i1i_A 12 FILKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICT 91 (377)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEE
T ss_pred EeecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEe
Confidence 3444567788887733344332210112346999999998776443 11 33333 4566789999999
Q ss_pred cccCCCCC--------chhHHHccc-----ccCCcchHHHHHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHhhCC
Q 010654 299 QIRGGGEL--------GRQWYENGK-----FLKKKNTFTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 299 d~rG~~~~--------g~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p 364 (505)
|+||+|.+ |..-..... .......++|+.+.+..+++.- +.+++. |+|||+||.+++.++.++|
T Consensus 92 D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~~ilvGhS~Gg~ia~~~a~~~p 169 (377)
T 3i1i_A 92 DNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM--GIARLHAVMGPSAGGMIAQQWAVHYP 169 (377)
T ss_dssp CCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT--TCCCBSEEEEETHHHHHHHHHHHHCT
T ss_pred cccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc--CCCcEeeEEeeCHhHHHHHHHHHHCh
Confidence 99988531 111000000 0011346777777777776653 335775 9999999999999999999
Q ss_pred CceeEEEe-cCCchhhhh-----------hc-cCC-----C----CC---------------CCcccc-cccCC------
Q 010654 365 DLFKAAVA-AVPFVDVLT-----------TM-LDP-----T----IP---------------LTTAEW-EEWGD------ 400 (505)
Q Consensus 365 ~~~~a~v~-~~~~~d~~~-----------~~-~~~-----~----~~---------------~~~~~~-~~~g~------ 400 (505)
++++++|+ .++...... .. ... . .| .....+ ..++.
T Consensus 170 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T 3i1i_A 170 HMVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVE 249 (377)
T ss_dssp TTBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCG
T ss_pred HHHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcccc
Confidence 99999998 544322000 00 000 0 00 000000 00110
Q ss_pred ------------------------CCCHHHH----HHHHhCCh-------hhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 401 ------------------------PWKEEFY----FYMKSYSP-------VDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 401 ------------------------~~~~~~~----~~~~~~sp-------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
..+...+ ..+...++ ...+.++++| +|+++|++|..+|+..+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~G~~D~~~~~~~~~~ 328 (377)
T 3i1i_A 250 PYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEAN-VLMIPCKQDLLQPSRYNYK 328 (377)
T ss_dssp GGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSE-EEEECBTTCSSSCTHHHHH
T ss_pred ccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCC-EEEEecCCccccCHHHHHH
Confidence 0011111 11111111 3345677887 9999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEecCC-CCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 446 FVAKLREMKTDDNILLFKCELG-AGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+++.+++.+..+++++++ + +||......++.+ ...+.+||.+++.
T Consensus 329 ~~~~~~~~g~~~~~~~i~---~~~gH~~~~e~p~~~--~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 329 MVDLLQKQGKYAEVYEIE---SINGHMAGVFDIHLF--EKKVYEFLNRKVS 374 (377)
T ss_dssp HHHHHHHTTCCEEECCBC---CTTGGGHHHHCGGGT--HHHHHHHHHSCCS
T ss_pred HHHHHHhcCCCceEEEcC---CCCCCcchhcCHHHH--HHHHHHHHHhhhh
Confidence 999998877677777787 6 7996533233332 2357889987663
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-16 Score=148.72 Aligned_cols=226 Identities=19% Similarity=0.205 Sum_probs=129.6
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+.+.||.+|.....-| .+.|.||++||.++... .|......|+++||.|+.+|+||+|.+.... ...
T Consensus 4 ~~~~~g~~l~y~~~g~-------~~~~~vvllHG~~~~~~--~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----~~~ 70 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGP-------RDAPVIHFHHGWPLSAD--DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW----DGH 70 (276)
T ss_dssp EECTTSCEEEEEEESC-------TTSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCC
T ss_pred EECCCCcEEEEEecCC-------CCCCeEEEECCCCcchh--HHHHHHHHHHhCCCEEEEecCCCCCCCCCCC----CCC
Confidence 4567898886542211 13478999999865433 3666677899999999999999998764311 000
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCchhhhhhccCC--CCCC----
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVDVLTTMLDP--TIPL---- 390 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~d~~~~~~~~--~~~~---- 390 (505)
.-....+|+.+.++.+ +.+++.++|||+||.+++.+++++ |++++++|..++........... ..+.
T Consensus 71 ~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 144 (276)
T 1zoi_A 71 DMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFD 144 (276)
T ss_dssp SHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred CHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHH
Confidence 1112234444444443 235799999999999998877776 99999998876532110000000 0000
Q ss_pred --------Cc-ccc----c-c-cC-----CCCCHHHHH----------------H---HHhCChhhcccCCCCCeEEEEc
Q 010654 391 --------TT-AEW----E-E-WG-----DPWKEEFYF----------------Y---MKSYSPVDNVKAQNYPHILVTA 431 (505)
Q Consensus 391 --------~~-~~~----~-~-~g-----~~~~~~~~~----------------~---~~~~sp~~~~~~~~~Pp~Li~~ 431 (505)
.. ..+ . . ++ ....++... . +...+....+.++++| +|+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l~i~ 223 (276)
T 1zoi_A 145 GFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQP-VLVMH 223 (276)
T ss_dssp HHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSC-EEEEE
T ss_pred HHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCC-EEEEE
Confidence 00 000 0 0 01 000111110 1 1112223445677898 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
|++|..+|+....+....+. ...++++++ ++||......++.+ ...+.+||.
T Consensus 224 G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~---~~gH~~~~e~p~~~--~~~i~~fl~ 275 (276)
T 1zoi_A 224 GDDDQIVPYENSGVLSAKLL---PNGALKTYK---GYPHGMPTTHADVI--NADLLAFIR 275 (276)
T ss_dssp ETTCSSSCSTTTHHHHHHHS---TTEEEEEET---TCCTTHHHHTHHHH--HHHHHHHHT
T ss_pred cCCCcccChHHHHHHHHhhC---CCceEEEcC---CCCCchhhhCHHHH--HHHHHHHhc
Confidence 99999999985544433332 245677887 88997543333322 234677774
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=162.07 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=147.4
Q ss_pred EECCCCceeeEEEEEeCC---ccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHH----HCCc---EEEEEcccCCCCCc
Q 010654 238 ASASDGTQIPICIVYRKN---LVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL----DRGF---IFAIAQIRGGGELG 307 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~---~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~----~~G~---~v~~~d~rG~~~~g 307 (505)
+.+.||.+|.+..+.|++ . .+.++.|+||++||.++... .|......|+ +.|| .|+.+|+||.|.+.
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~-~~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~ 101 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRR-SRTATRLNLVFLHGSGMSKV--VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSA 101 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTC-CTTCEEEEEEEECCTTCCGG--GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHH
T ss_pred ccCCCceEEEEEEEecCCCCCC-CCCCCCCeEEEEcCCCCcHH--HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCC
Confidence 457799999988777764 1 12344589999999876543 3555566777 3489 99999999887543
Q ss_pred hhHHHcccccCCc----chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKFLKKK----NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~~~~~----~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
..-. ...... ...+|+.+.++.+...-.+++.++.++|+|+||.+++.++.++|++++++|+.+|........
T Consensus 102 ~~~~---~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 102 VRNR---GRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHTT---TTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCc---cccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 3110 000111 233444444443321112444569999999999999999999999999999998876531100
Q ss_pred c--CCCCC-----CC----------------c-ccc----c--ccCCCCCHHHHHHHHh---------------------
Q 010654 384 L--DPTIP-----LT----------------T-AEW----E--EWGDPWKEEFYFYMKS--------------------- 412 (505)
Q Consensus 384 ~--~~~~~-----~~----------------~-~~~----~--~~g~~~~~~~~~~~~~--------------------- 412 (505)
. ....+ .. . ..+ . .+....+++..+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 0 00000 00 0 000 0 0011122222222211
Q ss_pred -------C--------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChH
Q 010654 413 -------Y--------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477 (505)
Q Consensus 413 -------~--------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~ 477 (505)
+ +....+.++++| +|+++|++|..+|+..+.++++.+. .+++++++ ++||......+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~---~~gH~~~~e~p 330 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKFVRKR-TIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIP---GGSHLVNVEAP 330 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGGCCSE-EEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEET---TCCTTHHHHSH
T ss_pred chhhhhhhcccccchHHHHHhccccCCC-EEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeC---CCCccchhcCH
Confidence 0 112445677887 9999999999999988888877764 35677887 88997543333
Q ss_pred HHHHHHHHHHHHHHHhhCCC
Q 010654 478 ERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 478 ~~~~~~~~~~~fl~~~l~~~ 497 (505)
+.+ ...+.+||.+++...
T Consensus 331 ~~~--~~~i~~fl~~~~~~~ 348 (398)
T 2y6u_A 331 DLV--IERINHHIHEFVLTS 348 (398)
T ss_dssp HHH--HHHHHHHHHHHHHHS
T ss_pred HHH--HHHHHHHHHHHHHhH
Confidence 322 335788999887543
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=144.87 Aligned_cols=183 Identities=16% Similarity=0.167 Sum_probs=119.9
Q ss_pred CCCcEEEEEcCCCCcCC-CCCCch-hHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 261 GSDPLLLYGYGSYEICN-DPAFNS-SRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~-~~~~~~-~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
++.|+||++||+++... ...|.. ....|+++ ||.|+.+|+||.+.. ++...++.+++.-
T Consensus 2 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~------------------~~~~~~~~~~~~l 63 (194)
T 2qs9_A 2 ASPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA------------------RESIWLPFMETEL 63 (194)
T ss_dssp -CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC------------------CHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc------------------cHHHHHHHHHHHh
Confidence 35689999999876642 233544 45677777 999999999984321 1222334444432
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccc-cCCCCCHHHHHHHHhCChh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE-WGDPWKEEFYFYMKSYSPV 416 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~sp~ 416 (505)
.+ .+++.++|+|+||.+++.++.++| ++++|+.+|........ ...... +..+... +.
T Consensus 64 ~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~~~~---~~------- 122 (194)
T 2qs9_A 64 HC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE--------NERASGYFTRPWQW---EK------- 122 (194)
T ss_dssp CC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH--------HHHHTSTTSSCCCH---HH-------
T ss_pred Cc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh--------hhHHHhhhcccccH---HH-------
Confidence 22 378999999999999999999988 89999888865421100 000000 1122111 11
Q ss_pred hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 417 DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 417 ~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+.++.. |+|+++|++|..+|++++.++++.+ ..++++++ ++||......++.+ ..+++||.+....
T Consensus 123 --~~~~~~-p~lii~G~~D~~vp~~~~~~~~~~~-----~~~~~~~~---~~gH~~~~~~p~~~---~~~~~fl~~~~~~ 188 (194)
T 2qs9_A 123 --IKANCP-YIVQFGSTDDPFLPWKEQQEVADRL-----ETKLHKFT---DCGHFQNTEFHELI---TVVKSLLKVPALE 188 (194)
T ss_dssp --HHHHCS-EEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEES---SCTTSCSSCCHHHH---HHHHHHHTCCCCC
T ss_pred --HHhhCC-CEEEEEeCCCCcCCHHHHHHHHHhc-----CCeEEEeC---CCCCccchhCHHHH---HHHHHHHHhhhhh
Confidence 122234 5999999999999999999998887 23677887 88998765555544 3467899876543
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.6e-17 Score=154.30 Aligned_cols=226 Identities=12% Similarity=0.099 Sum_probs=137.4
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 321 (505)
+|.++.... . ++.|+||++||.++... .|......|+++||.|+.+|+||.|..... ....
T Consensus 17 ~g~~l~~~~-~--------g~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~--------~~~~ 77 (309)
T 3u1t_A 17 EGATIAYVD-E--------GSGQPVLFLHGNPTSSY--LWRNIIPYVVAAGYRAVAPDLIGMGDSAKP--------DIEY 77 (309)
T ss_dssp TTEEEEEEE-E--------ECSSEEEEECCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCCC--------SSCC
T ss_pred CCeEEEEEE-c--------CCCCEEEEECCCcchhh--hHHHHHHHHHhCCCEEEEEccCCCCCCCCC--------Cccc
Confidence 777775432 1 22578999999876533 355566777889999999999998875431 1123
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-----------------hhcc
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----------------TTML 384 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-----------------~~~~ 384 (505)
.++++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|+.+|..... ..+.
T Consensus 78 ~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
T 3u1t_A 78 RLQDHVAYMDGFIDAL--GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLR 155 (309)
T ss_dssp CHHHHHHHHHHHHHHH--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHc--CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHh
Confidence 4555555555544431 23689999999999999999999999999999887643311 0000
Q ss_pred CC-----------------------CCCCCcccccc----cCCC-CCHHHHHHHHhC--------------ChhhcccCC
Q 010654 385 DP-----------------------TIPLTTAEWEE----WGDP-WKEEFYFYMKSY--------------SPVDNVKAQ 422 (505)
Q Consensus 385 ~~-----------------------~~~~~~~~~~~----~g~~-~~~~~~~~~~~~--------------sp~~~~~~~ 422 (505)
.. ...+....... +..+ .......++... +....+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 235 (309)
T 3u1t_A 156 TADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMAS 235 (309)
T ss_dssp STTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred ccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccC
Confidence 00 00000000000 0011 001111111111 111234567
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
++| +|+++|++|..+|+..+.++++.+.. .+.+.++ ++||......++.+ ...+.+||.+..+...
T Consensus 236 ~~P-~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~---~~gH~~~~~~p~~~--~~~i~~fl~~~~~~~~ 301 (309)
T 3u1t_A 236 PIP-KLLFHAEPGALAPKPVVDYLSENVPN----LEVRFVG---AGTHFLQEDHPHLI--GQGIADWLRRNKPHAS 301 (309)
T ss_dssp CSC-EEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEE---EESSCHHHHCHHHH--HHHHHHHHHHHCCCCC
T ss_pred CCC-EEEEecCCCCCCCHHHHHHHHhhCCC----CEEEEec---CCcccchhhCHHHH--HHHHHHHHHhcchhhh
Confidence 887 99999999999999888788777643 3566676 77996543333322 3357899999876543
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.8e-17 Score=154.75 Aligned_cols=219 Identities=17% Similarity=0.135 Sum_probs=133.6
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|..+..... ++.|+||++||+++... .|......|++ ||.|+.+|+||.|.... ....
T Consensus 55 ~~~~~~~~~~~---------g~~p~vv~lhG~~~~~~--~~~~~~~~L~~-~~~v~~~D~~G~G~S~~--------~~~~ 114 (314)
T 3kxp_A 55 IGRITLNVREK---------GSGPLMLFFHGITSNSA--VFEPLMIRLSD-RFTTIAVDQRGHGLSDK--------PETG 114 (314)
T ss_dssp CSSCEEEEEEE---------CCSSEEEEECCTTCCGG--GGHHHHHTTTT-TSEEEEECCTTSTTSCC--------CSSC
T ss_pred ECCEEEEEEec---------CCCCEEEEECCCCCCHH--HHHHHHHHHHc-CCeEEEEeCCCcCCCCC--------CCCC
Confidence 36777754421 22689999999875532 35544556655 79999999999887641 1222
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc-------cCCCCC-CC-
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-------LDPTIP-LT- 391 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~-------~~~~~~-~~- 391 (505)
..++++.+.+..+++.- +.+++.++|+|+||++++.++.++|++++++|+.+|........ ...... ..
T Consensus 115 ~~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (314)
T 3kxp_A 115 YEANDYADDIAGLIRTL--ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFED 192 (314)
T ss_dssp CSHHHHHHHHHHHHHHH--TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSS
T ss_pred CCHHHHHHHHHHHHHHh--CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcC
Confidence 34555555555555431 23689999999999999999999999999999987754321110 000000 00
Q ss_pred cccc----cccCCCCCHHHHHHH-H--------------------------hCChhhcccCCCCCeEEEEccCCCCCCCC
Q 010654 392 TAEW----EEWGDPWKEEFYFYM-K--------------------------SYSPVDNVKAQNYPHILVTAGLNDPRVMY 440 (505)
Q Consensus 392 ~~~~----~~~g~~~~~~~~~~~-~--------------------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~ 440 (505)
.... .........+..... . ..+....+.++++| +|+++|++|..+|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~Lii~G~~D~~~~~ 271 (314)
T 3kxp_A 193 IKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKP-VLIVRGESSKLVSA 271 (314)
T ss_dssp HHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSC-EEEEEETTCSSSCH
T ss_pred HHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCC-EEEEecCCCccCCH
Confidence 0000 000000011110000 0 01444556678898 99999999999999
Q ss_pred ChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 441 SEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 441 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+.+.++++.+. .++++.++ ++||......++. ....+.+||.
T Consensus 272 ~~~~~~~~~~~----~~~~~~~~---g~gH~~~~e~~~~--~~~~i~~fl~ 313 (314)
T 3kxp_A 272 AALAKTSRLRP----DLPVVVVP---GADHYVNEVSPEI--TLKAITNFID 313 (314)
T ss_dssp HHHHHHHHHCT----TSCEEEET---TCCSCHHHHCHHH--HHHHHHHHHH
T ss_pred HHHHHHHHhCC----CceEEEcC---CCCCcchhhCHHH--HHHHHHHHHh
Confidence 88888887763 35778888 8899753322332 2335677875
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=148.69 Aligned_cols=204 Identities=15% Similarity=0.081 Sum_probs=124.0
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.+++. ..|......|+++||.|+.+|+||+|.+.... .........+|+.+.++.+ +.++
T Consensus 24 ~pvvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~a~dl~~~l~~l------~~~~ 91 (277)
T 1brt_A 24 QPVVLIHGFPLSG--HSWERQSAALLDAGYRVITYDRRGFGQSSQPT----TGYDYDTFAADLNTVLETL------DLQD 91 (277)
T ss_dssp SEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS----SCCSHHHHHHHHHHHHHHH------TCCS
T ss_pred CeEEEECCCCCcH--HHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC----CCccHHHHHHHHHHHHHHh------CCCc
Confidence 4599999987643 34666678899999999999999998764311 0001112234444444443 2368
Q ss_pred EEEEeeChHHHHHHHHHhhCCC-ceeEEEecCCchhhhhhccCCCCCCC---c--------------cc-cc-----ccC
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPFVDVLTTMLDPTIPLT---T--------------AE-WE-----EWG 399 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~d~~~~~~~~~~~~~---~--------------~~-~~-----~~g 399 (505)
+.++|||+||.+++.++.++|+ +++++|..++........ ...+.. . .. +. .++
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKT--DDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYN 169 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCB--TTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTT
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccc--ccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhh
Confidence 9999999999999999999999 999999887643211000 000000 0 00 00 011
Q ss_pred ------CCCCHHHHHHH----H--------------hCChhhcccCCCCCeEEEEccCCCCCCCCChH-HHHHHHHHhcC
Q 010654 400 ------DPWKEEFYFYM----K--------------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AKFVAKLREMK 454 (505)
Q Consensus 400 ------~~~~~~~~~~~----~--------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~-~~~~~~L~~~~ 454 (505)
....++....+ . ..+....+.++++| +|+++|++|..+|+..+ .++++.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~--- 245 (277)
T 1brt_A 170 LDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVP-ALILHGTGDRTLPIENTARVFHKALP--- 245 (277)
T ss_dssp HHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSC-EEEEEETTCSSSCGGGTHHHHHHHCT---
T ss_pred ccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCC-eEEEecCCCccCChHHHHHHHHHHCC---
Confidence 11111111110 0 11222345677898 99999999999999888 77776653
Q ss_pred CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 455 TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 455 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
..++++++ ++||....+.++.+ ...+.+||.
T Consensus 246 -~~~~~~i~---~~gH~~~~e~p~~~--~~~i~~fl~ 276 (277)
T 1brt_A 246 -SAEYVEVE---GAPHGLLWTHAEEV--NTALLAFLA 276 (277)
T ss_dssp -TSEEEEET---TCCTTHHHHTHHHH--HHHHHHHHH
T ss_pred -CCcEEEeC---CCCcchhhhCHHHH--HHHHHHHHh
Confidence 35677887 88997543333332 234677874
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=150.06 Aligned_cols=191 Identities=16% Similarity=0.113 Sum_probs=128.4
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch--hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS--SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~--~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
.||.++++..+.|++. ++.|+||++||+.+... .|.. ....|+++||.|+.+|+||.|....... ...
T Consensus 14 ~~g~~l~~~~~~p~~~----~~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~----~~~ 83 (210)
T 1imj_A 14 VQGQALFFREALPGSG----QARFSVLLLHGIRFSSE--TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAA----PAP 83 (210)
T ss_dssp ETTEEECEEEEECSSS----CCSCEEEECCCTTCCHH--HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCC----SSC
T ss_pred eCCeEEEEEEeCCCCC----CCCceEEEECCCCCccc--eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCC----cch
Confidence 3889999987777543 46799999999875432 2443 3568889999999999998875433210 011
Q ss_pred CcchH--HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 319 KKNTF--TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 319 ~~~~~--~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
..... +|+...++.+ +.+++.++|+|+||.+++.++.++|++++++++.+|..... +
T Consensus 84 ~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~--------------~- 142 (210)
T 1imj_A 84 IGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--------------I- 142 (210)
T ss_dssp TTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG--------------S-
T ss_pred hhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc--------------c-
Confidence 11112 5555555554 24689999999999999999999999999999998864310 0
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
. ...+.++++| +|+++|++|. +|++.++++ +.+ .+.+++.++ ++||......
T Consensus 143 ------~------------~~~~~~~~~p-~l~i~g~~D~-~~~~~~~~~-~~~----~~~~~~~~~---~~~H~~~~~~ 194 (210)
T 1imj_A 143 ------N------------AANYASVKTP-ALIVYGDQDP-MGQTSFEHL-KQL----PNHRVLIMK---GAGHPCYLDK 194 (210)
T ss_dssp ------C------------HHHHHTCCSC-EEEEEETTCH-HHHHHHHHH-TTS----SSEEEEEET---TCCTTHHHHC
T ss_pred ------c------------chhhhhCCCC-EEEEEcCccc-CCHHHHHHH-hhC----CCCCEEEec---CCCcchhhcC
Confidence 0 1112345676 9999999999 988777665 443 345677777 8899743222
Q ss_pred HHHHHHHHHHHHHHHH
Q 010654 477 FERLREAAFTYTFLMR 492 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~ 492 (505)
++. ....+.+||.+
T Consensus 195 ~~~--~~~~i~~fl~~ 208 (210)
T 1imj_A 195 PEE--WHTGLLDFLQG 208 (210)
T ss_dssp HHH--HHHHHHHHHHT
T ss_pred HHH--HHHHHHHHHHh
Confidence 222 23346777764
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=149.38 Aligned_cols=193 Identities=16% Similarity=0.146 Sum_probs=122.8
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|+||++||+++.... |......|++ ||.|+.+|+||.|.....- ......++++.+.+..+++.- +.
T Consensus 22 ~~~~vv~~HG~~~~~~~--~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~l--~~ 90 (278)
T 3oos_A 22 EGPPLCVTHLYSEYNDN--GNTFANPFTD-HYSVYLVNLKGCGNSDSAK------NDSEYSMTETIKDLEAIREAL--YI 90 (278)
T ss_dssp SSSEEEECCSSEECCTT--CCTTTGGGGG-TSEEEEECCTTSTTSCCCS------SGGGGSHHHHHHHHHHHHHHT--TC
T ss_pred CCCeEEEEcCCCcchHH--HHHHHHHhhc-CceEEEEcCCCCCCCCCCC------CcccCcHHHHHHHHHHHHHHh--CC
Confidence 35789999998765443 4444556666 9999999999998764321 111234566666555555542 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCC-CCCcc---------------------------
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI-PLTTA--------------------------- 393 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~-~~~~~--------------------------- 393 (505)
+++.++|||+||.+++.++.++|++++++|..+|............. .....
T Consensus 91 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T 3oos_A 91 NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSR 170 (278)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHH
T ss_pred CeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHH
Confidence 68999999999999999999999999999999887661100000000 00000
Q ss_pred -----------cccc-cCCC----CCHHHHHHHH-----hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHh
Q 010654 394 -----------EWEE-WGDP----WKEEFYFYMK-----SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 452 (505)
Q Consensus 394 -----------~~~~-~g~~----~~~~~~~~~~-----~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~ 452 (505)
.+.. +..+ ........+. ..+....+.++++| +|+++|++|..+|+..+.++++.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~- 248 (278)
T 3oos_A 171 EWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIP-SFIYCGKHDVQCPYIFSCEIANLIP- 248 (278)
T ss_dssp HHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSC-EEEEEETTCSSSCHHHHHHHHHHST-
T ss_pred HHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCC-EEEEEeccCCCCCHHHHHHHHhhCC-
Confidence 0000 0000 0001111111 23344556778898 9999999999999988888887763
Q ss_pred cCCCCCeEEEEecCCCCCCCC
Q 010654 453 MKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 453 ~~~~~~~~~~~~~~~~gH~~~ 473 (505)
.+++++++ ++||...
T Consensus 249 ---~~~~~~~~---~~gH~~~ 263 (278)
T 3oos_A 249 ---NATLTKFE---ESNHNPF 263 (278)
T ss_dssp ---TEEEEEET---TCSSCHH
T ss_pred ---CcEEEEcC---CcCCCcc
Confidence 34677887 8899754
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-16 Score=162.57 Aligned_cols=236 Identities=11% Similarity=0.091 Sum_probs=141.9
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.+...+.+.||.+++.... ++.|+||++||+++... .|......|+++||.|+.+|+||.|.....-
T Consensus 237 ~~~~~~~~~dg~~l~~~~~---------g~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~-- 303 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVEL---------GSGPAVCLCHGFPESWY--SWRYQIPALAQAGYRVLAMDMKGYGESSAPP-- 303 (555)
T ss_dssp SEEEEEEEETTEEEEEEEE---------CSSSEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTSTTSCCCS--
T ss_pred cceeEEEeCCCcEEEEEEc---------CCCCEEEEEeCCCCchh--HHHHHHHHHHhCCCEEEEecCCCCCCCCCCC--
Confidence 3455666678988865421 24589999999876543 3666678899999999999999988754321
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh------------
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL------------ 380 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~------------ 380 (505)
......++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+.++.....
T Consensus 304 ----~~~~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 377 (555)
T 3i28_A 304 ----EIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA 377 (555)
T ss_dssp ----CGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHT
T ss_pred ----CcccccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhc
Confidence 11112234433333333322 134689999999999999999999999999999876632100
Q ss_pred ----------------------------hhccCCCCCC--Cccc-------c------cccCCCCCHHHHH-HHHh----
Q 010654 381 ----------------------------TTMLDPTIPL--TTAE-------W------EEWGDPWKEEFYF-YMKS---- 412 (505)
Q Consensus 381 ----------------------------~~~~~~~~~~--~~~~-------~------~~~g~~~~~~~~~-~~~~---- 412 (505)
..+....... .... + .........+... +...
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (555)
T 3i28_A 378 NPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 457 (555)
T ss_dssp CGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTT
T ss_pred CCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcc
Confidence 0000000000 0000 0 0000000111100 0000
Q ss_pred -----------------CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC
Q 010654 413 -----------------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG 475 (505)
Q Consensus 413 -----------------~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~ 475 (505)
.+....+.++++| +|+++|++|..+|+..+.++++.+. ..++++++ ++||.....
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~gH~~~~e 529 (555)
T 3i28_A 458 GFRGPLNWYRNMERNWKWACKSLGRKILIP-ALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIE---DCGHWTQMD 529 (555)
T ss_dssp TTHHHHHTTSCHHHHHHHHHTTTTCCCCSC-EEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEET---TCCSCHHHH
T ss_pred cchhHHHHHHhccccchhhccccccccccC-EEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeC---CCCCCcchh
Confidence 0222334577898 9999999999999998888766553 45777887 889975433
Q ss_pred hHHHHHHHHHHHHHHHHhhCCC
Q 010654 476 RFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 476 ~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.++.+ ...+.+||.+.....
T Consensus 530 ~p~~~--~~~i~~fl~~~~~~~ 549 (555)
T 3i28_A 530 KPTEV--NQILIKWLDSDARNP 549 (555)
T ss_dssp SHHHH--HHHHHHHHHHHTCC-
T ss_pred CHHHH--HHHHHHHHHhccCCC
Confidence 33322 335789999887644
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=8.8e-17 Score=148.97 Aligned_cols=212 Identities=12% Similarity=0.060 Sum_probs=129.7
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+||++||.++... .|......|+++||.|+.+|+||.|....... ....+++..+.+..+++.-.. .+
T Consensus 4 g~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~l~~l~~-~~ 73 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW--IWYKLKPLLESAGHRVTAVELAASGIDPRPIQ-------AVETVDEYSKPLIETLKSLPE-NE 73 (258)
T ss_dssp CCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGG-------GCCSHHHHHHHHHHHHHTSCT-TC
T ss_pred CCcEEEECCCCCccc--cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCC-------ccccHHHhHHHHHHHHHHhcc-cC
Confidence 389999999876543 36667788999999999999999987643211 113445555545444443222 37
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--------hccCCCCCCCccccc------------------
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------TMLDPTIPLTTAEWE------------------ 396 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~~~~~~~~~~~~~------------------ 396 (505)
++.++|||+||.+++.++.++|++++++|..+|...... ........+....+.
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKF 153 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHH
Confidence 899999999999999999999999999998877432110 000000000000000
Q ss_pred --c-cCCCCCHHHHHHH-HhC-------------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 397 --E-WGDPWKEEFYFYM-KSY-------------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 397 --~-~g~~~~~~~~~~~-~~~-------------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
. +.....++....+ ... .+.......++| +|+++|++|..+|+..+.++++.+. ..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~ 228 (258)
T 3dqz_A 154 MKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQ-RVYVMSSEDKAIPCDFIRWMIDNFN----VSKV 228 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSC-EEEEEETTCSSSCHHHHHHHHHHSC----CSCE
T ss_pred HHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCC-EEEEECCCCeeeCHHHHHHHHHhCC----cccE
Confidence 0 0001111111111 111 111122222577 9999999999999988888877664 3477
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
++++ ++||......++.+. ..+.+|+.++|
T Consensus 229 ~~~~---~~gH~~~~~~p~~~~--~~i~~fl~~~~ 258 (258)
T 3dqz_A 229 YEID---GGDHMVMLSKPQKLF--DSLSAIATDYM 258 (258)
T ss_dssp EEET---TCCSCHHHHSHHHHH--HHHHHHHHHTC
T ss_pred EEcC---CCCCchhhcChHHHH--HHHHHHHHHhC
Confidence 8888 889975433344333 35788988764
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=147.06 Aligned_cols=221 Identities=15% Similarity=0.112 Sum_probs=130.5
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.+++... .. ...|.||++||.++.. ...|......|+++||.|+.+|+||+|.+.... .....
T Consensus 9 ~~g~~l~~~~-~g-------~~~~~vvllHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~~~~ 74 (254)
T 2ocg_A 9 VNGVQLHYQQ-TG-------EGDHAVLLLPGMLGSG-ETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD-----RDFPA 74 (254)
T ss_dssp ETTEEEEEEE-EE-------CCSEEEEEECCTTCCH-HHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSC-----CCCCT
T ss_pred ECCEEEEEEE-ec-------CCCCeEEEECCCCCCC-ccchHHHHHHHhhCCCeEEEECCCCCCCCCCCC-----CCCCh
Confidence 3777775432 11 1236899999976541 123556667888889999999999998764310 11111
Q ss_pred c-hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---hccCCCCCCCccccc
Q 010654 321 N-TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---TMLDPTIPLTTAEWE 396 (505)
Q Consensus 321 ~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~---~~~~~~~~~~~~~~~ 396 (505)
. ..+++.++++++...+ .+++.++|||+||.+++.++.++|++++++|...+...... .... .... ...+.
T Consensus 75 ~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~-~~~~~ 149 (254)
T 2ocg_A 75 DFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE-GIRD-VSKWS 149 (254)
T ss_dssp THHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH-TTSC-GGGSC
T ss_pred HHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHH-HHHH-HHHHH
Confidence 1 2234445555555543 36899999999999999999999999999998776421100 0000 0000 00000
Q ss_pred ---------ccCCCCCHH----HHHHHHhC-------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 397 ---------EWGDPWKEE----FYFYMKSY-------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 397 ---------~~g~~~~~~----~~~~~~~~-------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
.++...... ....+... .....+.++++| +|+++|++|..+|+..+..+++.+. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~~----~ 224 (254)
T 2ocg_A 150 ERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCP-ALIVHGEKDPLVPRFHADFIHKHVK----G 224 (254)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSC-EEEEEETTCSSSCHHHHHHHHHHST----T
T ss_pred HHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCC-EEEEecCCCccCCHHHHHHHHHhCC----C
Confidence 011000000 00011111 112346678898 9999999999999988887776654 3
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 010654 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 490 (505)
.++++++ ++||......++.+. ..+.+||
T Consensus 225 ~~~~~~~---~~gH~~~~e~p~~~~--~~i~~fl 253 (254)
T 2ocg_A 225 SRLHLMP---EGKHNLHLRFADEFN--KLAEDFL 253 (254)
T ss_dssp CEEEEET---TCCTTHHHHTHHHHH--HHHHHHH
T ss_pred CEEEEcC---CCCCchhhhCHHHHH--HHHHHHh
Confidence 5677887 889975433333332 2466676
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.70 E-value=9e-17 Score=150.68 Aligned_cols=121 Identities=21% Similarity=0.293 Sum_probs=88.9
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.||.++.+...-+ ++.|+||++||.++... .|......|+++||.|+.+|+||.|...... ....
T Consensus 11 ~~g~~l~~~~~g~-------~~~~~vv~~hG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~------~~~~ 75 (286)
T 3qit_A 11 FGGNQICLCSWGS-------PEHPVVLCIHGILEQGL--AWQEVALPLAAQGYRVVAPDLFGHGRSSHLE------MVTS 75 (286)
T ss_dssp ETTEEEEEEEESC-------TTSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------SGGG
T ss_pred cCCceEEEeecCC-------CCCCEEEEECCCCcccc--hHHHHHHHhhhcCeEEEEECCCCCCCCCCCC------CCCC
Confidence 4788887664322 33589999999876543 3666678899999999999999988754321 1122
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 378 (505)
..+.++.+.+..+++.- +.+++.++|||+||++++.++.++|++++++|..+|...
T Consensus 76 ~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQEL--PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLP 131 (286)
T ss_dssp CSHHHHHHHHHHHHHHS--CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred cCHHHHHHHHHHHHHhc--CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCC
Confidence 34556555555555542 347899999999999999999999999999999988654
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=151.76 Aligned_cols=210 Identities=16% Similarity=0.176 Sum_probs=126.1
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||..++.. .|......|+++||.|+.+|+||+|....... ......-.+|+.++++++.+.+. +
T Consensus 16 ~~~vvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~----~~~~~~~~~d~~~~~~~l~~~~~---~ 86 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA--DVRMLGRFLESKGYTCHAPIYKGHGVPPEELV----HTGPDDWWQDVMNGYEFLKNKGY---E 86 (247)
T ss_dssp SCEEEEECCTTCCTH--HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHT----TCCHHHHHHHHHHHHHHHHHHTC---C
T ss_pred CcEEEEECCCCCChH--HHHHHHHHHHHCCCEEEecccCCCCCCHHHhc----CCCHHHHHHHHHHHHHHHHHcCC---C
Confidence 378999999765532 35555678888999999999999985432110 01111224566677777776553 5
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEec-CCchhh-hhhc-------cCC---CCCCCccc----cccc-CCC-CCH
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDV-LTTM-------LDP---TIPLTTAE----WEEW-GDP-WKE 404 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~-~~~~-------~~~---~~~~~~~~----~~~~-g~~-~~~ 404 (505)
++.++|||+||.+++.++.++| ++++|.. +|.... .... ... ........ ...+ ..+ ...
T Consensus 87 ~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
T 1tqh_A 87 KIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTL 164 (247)
T ss_dssp CEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTH
T ss_pred eEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHHHH
Confidence 8999999999999999999988 6666643 332200 0000 000 00000000 0000 001 001
Q ss_pred HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh-HHHHHHH
Q 010654 405 EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR-FERLREA 483 (505)
Q Consensus 405 ~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~ 483 (505)
.....+. .+....+.++++| +|++||++|..+|+..++++++.+... ..++++++ ++||....+. ++.+.
T Consensus 165 ~~~~~~~-~~~~~~l~~i~~P-~Lii~G~~D~~~p~~~~~~~~~~~~~~--~~~~~~~~---~~gH~~~~e~~~~~~~-- 235 (247)
T 1tqh_A 165 KALQELI-ADVRDHLDLIYAP-TFVVQARHDEMINPDSANIIYNEIESP--VKQIKWYE---QSGHVITLDQEKDQLH-- 235 (247)
T ss_dssp HHHHHHH-HHHHHTGGGCCSC-EEEEEETTCSSSCTTHHHHHHHHCCCS--SEEEEEET---TCCSSGGGSTTHHHHH--
T ss_pred HHHHHHH-HHHHhhcccCCCC-EEEEecCCCCCCCcchHHHHHHhcCCC--ceEEEEeC---CCceeeccCccHHHHH--
Confidence 0110010 1233456778898 999999999999999999888877532 35678887 8899764332 33332
Q ss_pred HHHHHHHHH
Q 010654 484 AFTYTFLMR 492 (505)
Q Consensus 484 ~~~~~fl~~ 492 (505)
..+.+||.+
T Consensus 236 ~~i~~Fl~~ 244 (247)
T 1tqh_A 236 EDIYAFLES 244 (247)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 357889875
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-17 Score=156.51 Aligned_cols=213 Identities=12% Similarity=0.089 Sum_probs=131.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+||++||.++... .|......|++ ||.|+.+|+||.|........ ......++++.+.+..+++.- +.+
T Consensus 28 ~~~vv~lHG~~~~~~--~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~ 98 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN--MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVAL--DLV 98 (282)
T ss_dssp SCEEEEECCTTCCGG--GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHHT--TCC
T ss_pred CCeEEEECCCCCCcc--hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHHc--CCC
Confidence 389999999765533 35555667766 999999999999876543210 011124555555555554442 347
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc--------------ccc------cccCCCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT--------------AEW------EEWGDPW 402 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--------------~~~------~~~g~~~ 402 (505)
++.++|||+||.+++.++.++|++++++|+.+|..........-...+.. ..+ ..++.+.
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 89999999999999999999999999999998865322110000000000 000 0001111
Q ss_pred CHHH-------------------HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 403 KEEF-------------------YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 403 ~~~~-------------------~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
.++. ...+...+....+.++++| +|+++|++|..+|+..+.++.+.+. ..++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~ 253 (282)
T 3qvm_A 179 SSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTP-ALIFQSAKDSLASPEVGQYMAENIP----NSQLELIQ 253 (282)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSC-EEEEEEEECTTCCHHHHHHHHHHSS----SEEEEEEE
T ss_pred chhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCC-eEEEEeCCCCcCCHHHHHHHHHhCC----CCcEEEec
Confidence 1111 1111222334556777888 9999999999999988888877764 34778888
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 464 CELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 464 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
++||......++. ....+.+||.++.
T Consensus 254 ---~~gH~~~~~~~~~--~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 254 ---AEGHCLHMTDAGL--ITPLLIHFIQNNQ 279 (282)
T ss_dssp ---EESSCHHHHCHHH--HHHHHHHHHHHC-
T ss_pred ---CCCCcccccCHHH--HHHHHHHHHHhcC
Confidence 7799753322332 2335788988754
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.4e-16 Score=145.61 Aligned_cols=208 Identities=17% Similarity=0.194 Sum_probs=121.3
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|+++||.|+.+|+||+|.+.... ....++++.+.+..+++.- ..+
T Consensus 27 g~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~a~dl~~ll~~l--~~~ 94 (281)
T 3fob_A 27 GKPVVLIHGWPLSGR--SWEYQVPALVEAGYRVITYDRRGFGKSSQPW--------EGYEYDTFTSDLHQLLEQL--ELQ 94 (281)
T ss_dssp SEEEEEECCTTCCGG--GGTTTHHHHHHTTEEEEEECCTTSTTSCCCS--------SCCSHHHHHHHHHHHHHHT--TCC
T ss_pred CCeEEEECCCCCcHH--HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc--------cccCHHHHHHHHHHHHHHc--CCC
Confidence 467889999876543 3555667888999999999999998764321 1233445444444444432 236
Q ss_pred cEEEEeeChHHHHHHHHHhh-CCCceeEEEecCCchhhhhhccCCCCCCCc-----------------------cccccc
Q 010654 343 KLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPLTT-----------------------AEWEEW 398 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~-----------------------~~~~~~ 398 (505)
++.++|||+||.+++.+++. +|++++.+|...+................. ..+...
T Consensus 95 ~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (281)
T 3fob_A 95 NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAA 174 (281)
T ss_dssp SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred cEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhccc
Confidence 89999999999877665554 589999988776532110000000000000 000000
Q ss_pred C---CCCCHHH-------------------HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 399 G---DPWKEEF-------------------YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 399 g---~~~~~~~-------------------~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
+ ....+.. ...+...+....+.++++| +|++||++|..+|++.+.++.... -..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P-~Lii~G~~D~~~p~~~~~~~~~~~---~p~ 250 (281)
T 3fob_A 175 GDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIP-TLIIHGDSDATVPFEYSGKLTHEA---IPN 250 (281)
T ss_dssp TTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSC-EEEEEETTCSSSCGGGTHHHHHHH---STT
T ss_pred ccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCC-EEEEecCCCCCcCHHHHHHHHHHh---CCC
Confidence 0 0011111 1111123334456788998 999999999999998774443222 234
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
.++++++ ++||....+.++.+.. .+.+||.
T Consensus 251 ~~~~~i~---~~gH~~~~e~p~~~~~--~i~~Fl~ 280 (281)
T 3fob_A 251 SKVALIK---GGPHGLNATHAKEFNE--ALLLFLK 280 (281)
T ss_dssp CEEEEET---TCCTTHHHHTHHHHHH--HHHHHHC
T ss_pred ceEEEeC---CCCCchhhhhHHHHHH--HHHHHhh
Confidence 5788888 8899764434443332 4677764
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.69 E-value=5.3e-17 Score=152.06 Aligned_cols=236 Identities=14% Similarity=0.199 Sum_probs=135.2
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
+...+...+| ++... .. .++.|+||++||.++... .|......|+++||.|+.+|+||.|.......
T Consensus 4 ~~~~~~~~~~-~~~~~---~~-----~~~~~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 70 (279)
T 4g9e_A 4 NYHELETSHG-RIAVR---ES-----EGEGAPLLMIHGNSSSGA--IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAID-- 70 (279)
T ss_dssp EEEEEEETTE-EEEEE---EC-----CCCEEEEEEECCTTCCGG--GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSC--
T ss_pred EEEEEEcCCc-eEEEE---ec-----CCCCCeEEEECCCCCchh--HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCC--
Confidence 3445566666 45332 11 134688999999876433 35555666678899999999999987653210
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc--cCCCCC--
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--LDPTIP-- 389 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~--~~~~~~-- 389 (505)
......++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+..+.++...+........ ......
T Consensus 71 ---~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~ 145 (279)
T 4g9e_A 71 ---PDRSYSMEGYADAMTEVMQQ--LGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMA 145 (279)
T ss_dssp ---HHHHSSHHHHHHHHHHHHHH--HTCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGG
T ss_pred ---cccCCCHHHHHHHHHHHHHH--hCCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhh
Confidence 00112345555555444443 133689999999999999999999999545554444433211100 000000
Q ss_pred ------CCccc---c--cccCCCCCHHHHHHHHhC------------------ChhhcccCCCCCeEEEEccCCCCCCCC
Q 010654 390 ------LTTAE---W--EEWGDPWKEEFYFYMKSY------------------SPVDNVKAQNYPHILVTAGLNDPRVMY 440 (505)
Q Consensus 390 ------~~~~~---~--~~~g~~~~~~~~~~~~~~------------------sp~~~~~~~~~Pp~Li~~G~~D~~vp~ 440 (505)
+.... + ..+..+..+.....+... +....+.++++| +|+++|+.|..+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~ 224 (279)
T 4g9e_A 146 LAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLP-IAVVNGRDEPFVEL 224 (279)
T ss_dssp GGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSC-EEEEEETTCSSBCH
T ss_pred hcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCC-EEEEEcCCCcccch
Confidence 00000 0 001122222222222211 222335667887 99999999999998
Q ss_pred ChHHHHH-HHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 441 SEPAKFV-AKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 441 ~~~~~~~-~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+.+.+++ +.+. ..++++++ ++||......++.+ ...+.+||.++-...
T Consensus 225 ~~~~~~~~~~~~----~~~~~~~~---~~gH~~~~~~p~~~--~~~i~~fl~~~~~~~ 273 (279)
T 4g9e_A 225 DFVSKVKFGNLW----EGKTHVID---NAGHAPFREAPAEF--DAYLARFIRDCTQLE 273 (279)
T ss_dssp HHHTTCCCSSBG----GGSCEEET---TCCSCHHHHSHHHH--HHHHHHHHHHHHSSC
T ss_pred HHHHHHhhccCC----CCeEEEEC---CCCcchHHhCHHHH--HHHHHHHHHHhhhhh
Confidence 7776665 3222 35678888 88997543333332 335788998876544
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-15 Score=146.14 Aligned_cols=209 Identities=17% Similarity=0.110 Sum_probs=124.9
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|+||++||+++.... |......|++ ||.|+.+|+||.|+.... ......++++.+.+..+++.- +.
T Consensus 66 ~~~~vv~lHG~~~~~~~--~~~~~~~L~~-g~~vi~~D~~G~gG~s~~-------~~~~~~~~~~~~~l~~~l~~l--~~ 133 (306)
T 2r11_A 66 DAPPLVLLHGALFSSTM--WYPNIADWSS-KYRTYAVDIIGDKNKSIP-------ENVSGTRTDYANWLLDVFDNL--GI 133 (306)
T ss_dssp TSCEEEEECCTTTCGGG--GTTTHHHHHH-HSEEEEECCTTSSSSCEE-------CSCCCCHHHHHHHHHHHHHHT--TC
T ss_pred CCCeEEEECCCCCCHHH--HHHHHHHHhc-CCEEEEecCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHhc--CC
Confidence 45899999998765433 5555667776 999999999998432211 112234555555555555432 23
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------ccCCCCCCCcccccc-c-CCC--CCHHH---H
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------MLDPTIPLTTAEWEE-W-GDP--WKEEF---Y 407 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------~~~~~~~~~~~~~~~-~-g~~--~~~~~---~ 407 (505)
+++.++|+|+||.+++.++.++|++++++|+.+|....... ............+.. . +.. ..+.. .
T Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (306)
T 2r11_A 134 EKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQF 213 (306)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHH
T ss_pred CceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHHHHhhCCcccccccccccc
Confidence 68999999999999999999999999999999887653110 000000000000000 0 000 00000 0
Q ss_pred HHHH-----------------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 408 FYMK-----------------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 408 ~~~~-----------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.... .......+.++++| +|+++|++|..+|+.++.++++.+ ...+++++++ ++||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~---~~gH 286 (306)
T 2r11_A 214 KAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVP-ILLLLGEHEVIYDPHSALHRASSF---VPDIEAEVIK---NAGH 286 (306)
T ss_dssp HHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSC-EEEEEETTCCSSCHHHHHHHHHHH---STTCEEEEET---TCCT
T ss_pred HHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCC-EEEEEeCCCcccCHHHHHHHHHHH---CCCCEEEEeC---CCCC
Confidence 0000 00122345567888 999999999999988777665543 2346788887 8899
Q ss_pred CCCCChHHHHHHHHHHHHHHH
Q 010654 471 FSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~fl~ 491 (505)
......++.+ ...+.+||.
T Consensus 287 ~~~~e~p~~~--~~~i~~fl~ 305 (306)
T 2r11_A 287 VLSMEQPTYV--NERVMRFFN 305 (306)
T ss_dssp THHHHSHHHH--HHHHHHHHC
T ss_pred CCcccCHHHH--HHHHHHHHh
Confidence 7543333322 234677764
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=149.97 Aligned_cols=212 Identities=14% Similarity=0.132 Sum_probs=132.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
...|+||++||.+++. ..|......|+ ++|.|+.+|+||.|.+... ......++++.+.+..+++.-.
T Consensus 13 ~~~~~vvllHG~~~~~--~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-- 80 (268)
T 3v48_A 13 ADAPVVVLISGLGGSG--SYWLPQLAVLE-QEYQVVCYDQRGTGNNPDT-------LAEDYSIAQMAAELHQALVAAG-- 80 (268)
T ss_dssp TTCCEEEEECCTTCCG--GGGHHHHHHHH-TTSEEEECCCTTBTTBCCC-------CCTTCCHHHHHHHHHHHHHHTT--
T ss_pred CCCCEEEEeCCCCccH--HHHHHHHHHHh-hcCeEEEECCCCCCCCCCC-------ccccCCHHHHHHHHHHHHHHcC--
Confidence 3468999999987653 23665556664 5799999999999865321 1112356666666665555422
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc----------cC--------CCCC--CCccccc-c--
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----------LD--------PTIP--LTTAEWE-E-- 397 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----------~~--------~~~~--~~~~~~~-~-- 397 (505)
.+++.++|||+||.+++.++.++|++++++|...+........ .. ...+ .....|. .
T Consensus 81 ~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3v48_A 81 IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARA 160 (268)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTH
T ss_pred CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhccc
Confidence 3689999999999999999999999999999877632110000 00 0000 0000000 0
Q ss_pred ----------c-CCCCCHHH---HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 398 ----------W-GDPWKEEF---YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 398 ----------~-g~~~~~~~---~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
. ..+..... ...+...+....+.++++| +|+++|++|..+|+..+.++.+.+.. .++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P-~Lii~G~~D~~~p~~~~~~l~~~~p~----~~~~~~~ 235 (268)
T 3v48_A 161 PRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCP-VQIICASDDLLVPTACSSELHAALPD----SQKMVMP 235 (268)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSC-EEEEEETTCSSSCTHHHHHHHHHCSS----EEEEEES
T ss_pred ccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCC-eEEEEeCCCcccCHHHHHHHHHhCCc----CeEEEeC
Confidence 0 00000011 1122233334556788998 99999999999999988888777643 4567787
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 464 CELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 464 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
++||....+.++.+.. .+.+||.+.+
T Consensus 236 ---~~GH~~~~e~p~~~~~--~i~~fl~~~~ 261 (268)
T 3v48_A 236 ---YGGHACNVTDPETFNA--LLLNGLASLL 261 (268)
T ss_dssp ---SCCTTHHHHCHHHHHH--HHHHHHHHHH
T ss_pred ---CCCcchhhcCHHHHHH--HHHHHHHHhc
Confidence 8899765444444433 5788988764
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.3e-17 Score=150.47 Aligned_cols=222 Identities=15% Similarity=0.128 Sum_probs=130.2
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
+|.+++... . ++.|+||++||.++... .|......|++ +||.|+.+|+||.|....... ....
T Consensus 9 ~g~~l~y~~---~------g~~~~vv~lhG~~~~~~--~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-----~~~~ 72 (272)
T 3fsg_A 9 TRSNISYFS---I------GSGTPIIFLHGLSLDKQ--STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-----STSD 72 (272)
T ss_dssp CTTCCEEEE---E------CCSSEEEEECCTTCCHH--HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-----CSHH
T ss_pred cCCeEEEEE---c------CCCCeEEEEeCCCCcHH--HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-----CCHH
Confidence 677775431 1 24578999999865432 24433445666 699999999999886543210 1111
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC-CCC----------
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP-TIP---------- 389 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~-~~~---------- 389 (505)
...+|+.+.++.+. +.+++.++|||+||.+++.++.++|++++++++.+|........... ...
T Consensus 73 ~~~~~~~~~l~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T 3fsg_A 73 NVLETLIEAIEEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPV 147 (272)
T ss_dssp HHHHHHHHHHHHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCC
T ss_pred HHHHHHHHHHHHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcc
Confidence 23344444444421 34789999999999999999999999999999988875322111000 000
Q ss_pred CCcc---cccccCCCCCHHHHH-------------------HHHh-----CChhhcccCCCCCeEEEEccCCCCCCCCCh
Q 010654 390 LTTA---EWEEWGDPWKEEFYF-------------------YMKS-----YSPVDNVKAQNYPHILVTAGLNDPRVMYSE 442 (505)
Q Consensus 390 ~~~~---~~~~~g~~~~~~~~~-------------------~~~~-----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~ 442 (505)
+... .+........+..+. .+.. .++...+.++++| +|+++|++|..+|+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~ 226 (272)
T 3fsg_A 148 ENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFP-FKIMVGRNDQVVGYQE 226 (272)
T ss_dssp TTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSC-EEEEEETTCTTTCSHH
T ss_pred cCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCC-EEEEEeCCCCcCCHHH
Confidence 0000 000000000111110 0100 0111134677888 9999999999999988
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 443 PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 443 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+.++++.+. .+++++++ ++||......++.+ ...+.+||.+..
T Consensus 227 ~~~~~~~~~----~~~~~~~~---~~gH~~~~~~~~~~--~~~i~~fl~~~~ 269 (272)
T 3fsg_A 227 QLKLINHNE----NGEIVLLN---RTGHNLMIDQREAV--GFHFDLFLDELN 269 (272)
T ss_dssp HHHHHTTCT----TEEEEEES---SCCSSHHHHTHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHhcC----CCeEEEec---CCCCCchhcCHHHH--HHHHHHHHHHhh
Confidence 888776553 35677887 88997543333322 235788888754
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.9e-16 Score=147.16 Aligned_cols=210 Identities=19% Similarity=0.219 Sum_probs=121.9
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||+++.... |......++++||.|+.+|+||+|.+...-. .........+|+.+.++.+. + .++
T Consensus 29 ~~vvllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~dl~~~~~~l~--~---~~~ 98 (293)
T 1mtz_A 29 AKLMTMHGGPGMSHD--YLLSLRDMTKEGITVLFYDQFGCGRSEEPDQ---SKFTIDYGVEEAEALRSKLF--G---NEK 98 (293)
T ss_dssp EEEEEECCTTTCCSG--GGGGGGGGGGGTEEEEEECCTTSTTSCCCCG---GGCSHHHHHHHHHHHHHHHH--T---TCC
T ss_pred CeEEEEeCCCCcchh--HHHHHHHHHhcCcEEEEecCCCCccCCCCCC---CcccHHHHHHHHHHHHHHhc--C---CCc
Confidence 789999998765432 2223345578899999999999987543210 00011122344444444441 2 258
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc-----CCCCC---------------CCccc-------c-
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML-----DPTIP---------------LTTAE-------W- 395 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-----~~~~~---------------~~~~~-------~- 395 (505)
+.++|||+||.+++.++.++|++++++|..+|......... ....+ ..... +
T Consensus 99 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (293)
T 1mtz_A 99 VFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFY 178 (293)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred EEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHH
Confidence 99999999999999999999999999999887654211000 00000 00000 0
Q ss_pred cccC---CCCCHHHHHHH---H---------------------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHH
Q 010654 396 EEWG---DPWKEEFYFYM---K---------------------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVA 448 (505)
Q Consensus 396 ~~~g---~~~~~~~~~~~---~---------------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~ 448 (505)
..+. .+........+ . ..+....+.++++| +|+++|++| .+++..+.++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D-~~~~~~~~~~~~ 256 (293)
T 1mtz_A 179 HQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIP-TLITVGEYD-EVTPNVARVIHE 256 (293)
T ss_dssp HHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSC-EEEEEETTC-SSCHHHHHHHHH
T ss_pred HhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCC-EEEEeeCCC-CCCHHHHHHHHH
Confidence 0000 11111111100 0 01122345667898 999999999 677777777666
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
.+. ..++++++ ++||....+.++.+ ...+.+||.++|
T Consensus 257 ~~~----~~~~~~~~---~~gH~~~~e~p~~~--~~~i~~fl~~~l 293 (293)
T 1mtz_A 257 KIA----GSELHVFR---DCSHLTMWEDREGY--NKLLSDFILKHL 293 (293)
T ss_dssp HST----TCEEEEET---TCCSCHHHHSHHHH--HHHHHHHHHTCC
T ss_pred hCC----CceEEEeC---CCCCCccccCHHHH--HHHHHHHHHhcC
Confidence 543 45778887 88997543333332 335788987653
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.68 E-value=8.1e-17 Score=142.57 Aligned_cols=180 Identities=16% Similarity=0.178 Sum_probs=118.6
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHH-HHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.|+||++||..+.... .|..... .|+++||.|+.+|+|.++. ..++++.+.+..+++.- .
T Consensus 4 ~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~---~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL---H 64 (192)
T ss_dssp CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---C
T ss_pred CCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---c
Confidence 5889999998765431 3555453 5778999999999993221 13455555554444432 4
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCCchhhhhhccCCCCCCCccccccc-CCCCCHHHHHHHHhCChhhc
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDN 418 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~ 418 (505)
+++.++|||+||.+++.++.++|+ +++++|..+|....... . .....+ ..+.+. ..
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----~----~~~~~~~~~~~~~------------~~ 123 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT-----L----QMLDEFTQGSFDH------------QK 123 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----C----GGGGGGTCSCCCH------------HH
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc-----c----hhhhhhhhcCCCH------------HH
Confidence 789999999999999999999999 99999999887543211 1 011111 112121 12
Q ss_pred ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 419 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 419 ~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+.++++| +|+++|++|..+|++++.++++.+ +.++++++ ++||......+..+. .+.+|+.+.+
T Consensus 124 ~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~---~~gH~~~~~~~~~~~---~~~~~l~~~l 187 (192)
T 1uxo_A 124 IIESAKH-RAVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQ---HGGHFLEDEGFTSLP---IVYDVLTSYF 187 (192)
T ss_dssp HHHHEEE-EEEEEETTCSSSCHHHHHHHHHHT-----TCEEEEET---TCTTSCGGGTCSCCH---HHHHHHHHHH
T ss_pred HHhhcCC-EEEEecCCCCcCCHHHHHHHHHhc-----CceEEEeC---CCcCcccccccccHH---HHHHHHHHHH
Confidence 2334455 999999999999999998888776 34677887 889976433322221 2455665555
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.2e-17 Score=147.30 Aligned_cols=188 Identities=16% Similarity=0.171 Sum_probs=119.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHH----Hc
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLI----KN 336 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~----~~ 336 (505)
++.|+||++||.++.... |. ....|+ +||.|+.+|+||.|.... .....+++..+.+..++ .+
T Consensus 14 ~~~~~vv~~hG~~~~~~~--~~-~~~~l~-~g~~v~~~d~~g~g~s~~---------~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKI--FG-ELEKYL-EDYNCILLDLKGHGESKG---------QCPSTVYGYIDNVANFITNSEVT 80 (245)
T ss_dssp TCSCEEEEECCTTCCGGG--GT-TGGGGC-TTSEEEEECCTTSTTCCS---------CCCSSHHHHHHHHHHHHHHCTTT
T ss_pred CCCCEEEEEeCCcccHHH--HH-HHHHHH-hCCEEEEecCCCCCCCCC---------CCCcCHHHHHHHHHHHHHhhhhH
Confidence 346899999998765433 33 334444 899999999999887541 11234455554444444 11
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhh-CCCceeEEEecCCchhhhhh-------ccCCCCCC---------Ccccc-ccc
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTT-------MLDPTIPL---------TTAEW-EEW 398 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~-------~~~~~~~~---------~~~~~-~~~ 398 (505)
.... ++.++|+|+||.+++.++.+ +|+ ++++|+.+|....... +....... ....+ ..+
T Consensus 81 ~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (245)
T 3e0x_A 81 KHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKY 157 (245)
T ss_dssp TTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHHH
T ss_pred hhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHHH
Confidence 2222 89999999999999999999 999 9999999887654110 00000000 00000 000
Q ss_pred -CCC-CCHH----HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 399 -GDP-WKEE----FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 399 -g~~-~~~~----~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
... ..+. .+..+...+....+.++++| +|+++|++|..+|++.+.++++.+. .+++++++ ++||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~gH~~ 229 (245)
T 3e0x_A 158 FETLEKDPDIMINDLIACKLIDLVDNLKNIDIP-VKAIVAKDELLTLVEYSEIIKKEVE----NSELKIFE---TGKHFL 229 (245)
T ss_dssp HTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSC-EEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEES---SCGGGH
T ss_pred HHHHhcCcHHHHHHHHHhccccHHHHHHhCCCC-EEEEEeCCCCCCCHHHHHHHHHHcC----CceEEEeC---CCCcce
Confidence 000 0111 11222345556667788898 9999999999999988888877764 35677887 889965
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.4e-16 Score=145.83 Aligned_cols=206 Identities=15% Similarity=0.078 Sum_probs=121.9
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.++.. ..|......|+++||.|+.+|+||+|.+.... .........+|+.+.++.+ +.++
T Consensus 24 ~pvvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~~~dl~~~l~~l------~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLDG--HSWERQTRELLAQGYRVITYDRRGFGGSSKVN----TGYDYDTFAADLHTVLETL------DLRD 91 (279)
T ss_dssp EEEEEECCTTCCG--GGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS----SCCSHHHHHHHHHHHHHHH------TCCS
T ss_pred CcEEEEcCCCchh--hHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHhc------CCCc
Confidence 4599999987643 33666677899999999999999998764321 0001112234554444443 2368
Q ss_pred EEEEeeChHHHHHHHHHhhCCC-ceeEEEecCCchhhhhhccCCCCCCCcc--------------c-cc-----cc----
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPFVDVLTTMLDPTIPLTTA--------------E-WE-----EW---- 398 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~d~~~~~~~~~~~~~~~--------------~-~~-----~~---- 398 (505)
+.++|||+||.+++.++.++|+ +++++|..++.................. . +. .+
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDE 171 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhccc
Confidence 9999999999999999999998 9999998876432110000000000000 0 00 00
Q ss_pred --CCCCCHHHHHH----HH--------------hCChhhcccCC---CCCeEEEEccCCCCCCCCChH-HHHHHHHHhcC
Q 010654 399 --GDPWKEEFYFY----MK--------------SYSPVDNVKAQ---NYPHILVTAGLNDPRVMYSEP-AKFVAKLREMK 454 (505)
Q Consensus 399 --g~~~~~~~~~~----~~--------------~~sp~~~~~~~---~~Pp~Li~~G~~D~~vp~~~~-~~~~~~L~~~~ 454 (505)
+....++.... .. ..+....+.++ ++| +|+++|++|..+|+..+ .++.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P-~lii~G~~D~~~~~~~~~~~~~~~~~--- 247 (279)
T 1hkh_A 172 NLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKP-TLILHGTKDNILPIDATARRFHQAVP--- 247 (279)
T ss_dssp HBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCC-EEEEEETTCSSSCTTTTHHHHHHHCT---
T ss_pred CCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCC-EEEEEcCCCccCChHHHHHHHHHhCC---
Confidence 11111111100 00 11112234556 887 99999999999999887 77766543
Q ss_pred CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 455 TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 455 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
..++++++ ++||......++.+ ...+.+||.
T Consensus 248 -~~~~~~i~---~~gH~~~~e~p~~~--~~~i~~fl~ 278 (279)
T 1hkh_A 248 -EADYVEVE---GAPHGLLWTHADEV--NAALKTFLA 278 (279)
T ss_dssp -TSEEEEET---TCCTTHHHHTHHHH--HHHHHHHHH
T ss_pred -CeeEEEeC---CCCccchhcCHHHH--HHHHHHHhh
Confidence 45777887 88997543333332 234677774
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-16 Score=147.19 Aligned_cols=227 Identities=14% Similarity=0.079 Sum_probs=134.4
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch-hHHHcc
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR-QWYENG 314 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~-~~~~~~ 314 (505)
..+...+|.+++....-| ...|.||++||.++.... .|......| +.||.|+.+|.||+|.+.. .-
T Consensus 5 ~~~~~~~g~~l~~~~~G~-------~~~~~vvllHG~~~~~~~-~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~---- 71 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGP-------VEGPALFVLHGGPGGNAY-VLREGLQDY-LEGFRVVYFDQRGSGRSLELPQ---- 71 (286)
T ss_dssp EEEEECSSCEEEEEEESC-------TTSCEEEEECCTTTCCSH-HHHHHHGGG-CTTSEEEEECCTTSTTSCCCCS----
T ss_pred eeEEeECCEEEEEEeecC-------CCCCEEEEECCCCCcchh-HHHHHHHHh-cCCCEEEEECCCCCCCCCCCcc----
Confidence 344556888886543211 134789999998765430 255444555 5689999999999987643 10
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---hccCCC--CC
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---TMLDPT--IP 389 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~---~~~~~~--~~ 389 (505)
......++++.+.+..+++.- ..+++.++|||+||.+++.++.++|+ ++++|..++..+... ...... .+
T Consensus 72 --~~~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (286)
T 2yys_A 72 --DPRLFTVDALVEDTLLLAEAL--GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAP 146 (286)
T ss_dssp --CGGGCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCC
T ss_pred --CcccCcHHHHHHHHHHHHHHh--CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhcccc
Confidence 000233444444444444432 23689999999999999999999999 999998887542211 000000 00
Q ss_pred C--------------Ccccc-cc--cC-------------------CCCCHHHH--HHHHhCChhhcccCCCCCeEEEEc
Q 010654 390 L--------------TTAEW-EE--WG-------------------DPWKEEFY--FYMKSYSPVDNVKAQNYPHILVTA 431 (505)
Q Consensus 390 ~--------------~~~~~-~~--~g-------------------~~~~~~~~--~~~~~~sp~~~~~~~~~Pp~Li~~ 431 (505)
. ....+ .. +. .+.....+ ..+...+....+.++++| +|+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~ 225 (286)
T 2yys_A 147 LPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRP-LYVLV 225 (286)
T ss_dssp CSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSC-EEEEE
T ss_pred chhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCC-EEEEE
Confidence 0 00000 00 00 00000000 000111223446678898 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
|++|..+|+. ++++++ +.. .++++++ ++||....+.++.+ ...+.+||.+
T Consensus 226 G~~D~~~~~~-~~~~~~-~~~----~~~~~i~---~~gH~~~~e~p~~~--~~~i~~fl~~ 275 (286)
T 2yys_A 226 GERDGTSYPY-AEEVAS-RLR----APIRVLP---EAGHYLWIDAPEAF--EEAFKEALAA 275 (286)
T ss_dssp ETTCTTTTTT-HHHHHH-HHT----CCEEEET---TCCSSHHHHCHHHH--HHHHHHHHHT
T ss_pred eCCCCcCCHh-HHHHHh-CCC----CCEEEeC---CCCCCcChhhHHHH--HHHHHHHHHh
Confidence 9999999999 888887 653 4678887 88997643344333 3357888875
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.67 E-value=4.8e-16 Score=146.76 Aligned_cols=228 Identities=15% Similarity=0.149 Sum_probs=129.7
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC-CcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY-EICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~-~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
+...+|.+++... .+. ...|+||++||.. +......|......|++. |.|+.+|+||+|.+....
T Consensus 11 ~~~~~g~~l~y~~---~g~----~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~------ 76 (285)
T 1c4x_A 11 RFPSGTLASHALV---AGD----PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFGQSEYPE------ 76 (285)
T ss_dssp EECCTTSCEEEEE---ESC----TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTSTTSCCCS------
T ss_pred EEEECCEEEEEEe---cCC----CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCCCCCCCC------
Confidence 3445787776432 110 2247799999963 322223355555666655 999999999998764311
Q ss_pred cCCcchHHHH----HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-------hhccC
Q 010654 317 LKKKNTFTDF----IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-------TTMLD 385 (505)
Q Consensus 317 ~~~~~~~~D~----~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-------~~~~~ 385 (505)
.....++++ .+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|..+|..... ..+..
T Consensus 77 -~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 153 (285)
T 1c4x_A 77 -TYPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLA 153 (285)
T ss_dssp -SCCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHT
T ss_pred -CcccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHH
Confidence 001233444 3333333332 123689999999999999999999999999999887643210 00000
Q ss_pred C-CCCCCc--ccc-cc-cCCC-C---C-------------HHHHHHHHh------------CChhhcccCCCCCeEEEEc
Q 010654 386 P-TIPLTT--AEW-EE-WGDP-W---K-------------EEFYFYMKS------------YSPVDNVKAQNYPHILVTA 431 (505)
Q Consensus 386 ~-~~~~~~--~~~-~~-~g~~-~---~-------------~~~~~~~~~------------~sp~~~~~~~~~Pp~Li~~ 431 (505)
. ..+... ..+ .. ...+ . . ++....+.. ..+...+.++++| +|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~ 232 (285)
T 1c4x_A 154 FYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHD-VLVFH 232 (285)
T ss_dssp GGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSC-EEEEE
T ss_pred HhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCC-EEEEE
Confidence 0 000000 000 00 0011 0 0 111110000 0122345677888 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
|++|..+|+..++++++.+. ..++++++ ++||....+.++.+ ...+.+||.+
T Consensus 233 G~~D~~~p~~~~~~~~~~~~----~~~~~~i~---~~gH~~~~e~p~~~--~~~i~~fl~~ 284 (285)
T 1c4x_A 233 GRQDRIVPLDTSLYLTKHLK----HAELVVLD---RCGHWAQLERWDAM--GPMLMEHFRA 284 (285)
T ss_dssp ETTCSSSCTHHHHHHHHHCS----SEEEEEES---SCCSCHHHHSHHHH--HHHHHHHHHC
T ss_pred eCCCeeeCHHHHHHHHHhCC----CceEEEeC---CCCcchhhcCHHHH--HHHHHHHHhc
Confidence 99999999998888877654 34677887 88997543333332 2346778753
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=6.7e-16 Score=144.33 Aligned_cols=224 Identities=17% Similarity=0.130 Sum_probs=133.6
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
.+.+.||.+|.+... . .+..|+||++||.+.... .|......|++ +|.|+.+|.||+|.+...
T Consensus 8 ~~~~~~g~~l~y~~~-G------~~~~p~lvl~hG~~~~~~--~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~------- 70 (266)
T 3om8_A 8 FLATSDGASLAYRLD-G------AAEKPLLALSNSIGTTLH--MWDAQLPALTR-HFRVLRYDARGHGASSVP------- 70 (266)
T ss_dssp EEECTTSCEEEEEEE-S------CTTSCEEEEECCTTCCGG--GGGGGHHHHHT-TCEEEEECCTTSTTSCCC-------
T ss_pred EEeccCCcEEEEEec-C------CCCCCEEEEeCCCccCHH--HHHHHHHHhhc-CcEEEEEcCCCCCCCCCC-------
Confidence 356779998865432 1 123589999999765432 36666667765 799999999999876431
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh------hhhh---ccC-C
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD------VLTT---MLD-P 386 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d------~~~~---~~~-~ 386 (505)
.....++++.+.+..+++.-. .+++.++|||+||.+++.++.++|++++++|...+... +... ... .
T Consensus 71 -~~~~~~~~~a~dl~~~l~~l~--~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 147 (266)
T 3om8_A 71 -PGPYTLARLGEDVLELLDALE--VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAE 147 (266)
T ss_dssp -CSCCCHHHHHHHHHHHHHHTT--CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCS
T ss_pred -CCCCCHHHHHHHHHHHHHHhC--CCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccc
Confidence 112334444444444443322 36899999999999999999999999999998755321 1100 000 0
Q ss_pred CCCCCc----ccc--ccc--CCCCCHHH----------------HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCCh
Q 010654 387 TIPLTT----AEW--EEW--GDPWKEEF----------------YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSE 442 (505)
Q Consensus 387 ~~~~~~----~~~--~~~--g~~~~~~~----------------~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~ 442 (505)
...... ..| ..+ ..+...+. +..+...+....+.++++| +|+++|++|..+|+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P-~Lvi~G~~D~~~~~~~ 226 (266)
T 3om8_A 148 DMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERP-TLVIAGAYDTVTAASH 226 (266)
T ss_dssp SSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSC-EEEEEETTCSSSCHHH
T ss_pred cHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCC-EEEEEeCCCCCCCHHH
Confidence 000000 000 000 01100000 0111222223456778898 9999999999999988
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 443 PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 443 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++++++.+.. .++++++ +||....+.++.+.. .+.+||.
T Consensus 227 ~~~l~~~ip~----a~~~~i~----~gH~~~~e~p~~~~~--~i~~Fl~ 265 (266)
T 3om8_A 227 GELIAASIAG----ARLVTLP----AVHLSNVEFPQAFEG--AVLSFLG 265 (266)
T ss_dssp HHHHHHHSTT----CEEEEES----CCSCHHHHCHHHHHH--HHHHHHT
T ss_pred HHHHHHhCCC----CEEEEeC----CCCCccccCHHHHHH--HHHHHhc
Confidence 8888777653 4667775 489764444444333 4677763
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-16 Score=148.37 Aligned_cols=230 Identities=20% Similarity=0.204 Sum_probs=130.7
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC-CcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY-EICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~-~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
.+|.++.... . ++.|.||++||.. +......|......|++. |.|+.+|+||.|.+.. ...
T Consensus 23 ~~g~~l~y~~---~------g~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~--------~~~ 84 (296)
T 1j1i_A 23 AGGVETRYLE---A------GKGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKTAK--------PDI 84 (296)
T ss_dssp ETTEEEEEEE---E------CCSSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTSTTSCC--------CSS
T ss_pred ECCEEEEEEe---c------CCCCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCCCCCC--------CCC
Confidence 4787775431 1 1247899999964 222222344445566555 9999999999987641 011
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc--cCCCC--CCCcccc
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--LDPTI--PLTTAEW 395 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~--~~~~~--~~~~~~~ 395 (505)
...+++..+.+..+++.-.+ .+++.++|||+||.+++.++.++|++++++|..+|........ ..... .......
T Consensus 85 ~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (296)
T 1j1i_A 85 EYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGM 163 (296)
T ss_dssp CCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHH
Confidence 12344544444444433222 2689999999999999999999999999999887753210000 00000 0000000
Q ss_pred ----cc-cCCC--CCHHH----------------HHH-HHh-------CChhhcccCCCCCeEEEEccCCCCCCCCChHH
Q 010654 396 ----EE-WGDP--WKEEF----------------YFY-MKS-------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 396 ----~~-~g~~--~~~~~----------------~~~-~~~-------~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
.. ...+ ..++. +.. +.. ......+.++++| +|+++|++|..+|+..+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~Lii~G~~D~~~~~~~~~ 242 (296)
T 1j1i_A 164 VHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVP-TLVVQGKDDKVVPVETAY 242 (296)
T ss_dssp HHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSC-EEEEEETTCSSSCHHHHH
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCC-EEEEEECCCcccCHHHHH
Confidence 00 0111 01110 000 000 0122345677898 999999999999998888
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 445 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
++++.+. ..++++++ ++||....+.++.+ ...+.+||.++++.+|.
T Consensus 243 ~~~~~~~----~~~~~~i~---~~gH~~~~e~p~~~--~~~i~~fl~~~~~~~~~ 288 (296)
T 1j1i_A 243 KFLDLID----DSWGYIIP---HCGHWAMIEHPEDF--ANATLSFLSLRVDITPA 288 (296)
T ss_dssp HHHHHCT----TEEEEEES---SCCSCHHHHSHHHH--HHHHHHHHHHC------
T ss_pred HHHHHCC----CCEEEEEC---CCCCCchhcCHHHH--HHHHHHHHhccCCcCch
Confidence 8877654 34677787 88997543333333 33578999999877654
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.67 E-value=6.8e-16 Score=145.95 Aligned_cols=210 Identities=11% Similarity=0.065 Sum_probs=125.8
Q ss_pred CcEEEEEcCC-CCcCCCCCCchhH-HHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 263 DPLLLYGYGS-YEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 263 ~P~iv~~hGg-~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
.|.||++||. ++......|.... ..|+++ |.|+.+|+||+|.+... ......++++.+.+..+++.- +
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l--~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGFNKSDAV-------VMDEQRGLVNARAVKGLMDAL--D 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHHT--T
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCCCCCCCC-------CCcCcCHHHHHHHHHHHHHHh--C
Confidence 4789999997 3322222355555 666655 99999999999876431 111245566655555554442 2
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---------------hccCCCCCCCcccccc-cCCC--C
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---------------TMLDPTIPLTTAEWEE-WGDP--W 402 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~---------------~~~~~~~~~~~~~~~~-~g~~--~ 402 (505)
.+++.++|||+||.+++.++.++|++++++|..+|...... .+.............. ...+ .
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 36899999999999999999999999999998876431000 0000000000000000 0000 0
Q ss_pred CHH--------------HHHH----HH-----hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 403 KEE--------------FYFY----MK-----SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 403 ~~~--------------~~~~----~~-----~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
.++ .... +. ..+....+.++++| +|+++|++|..+|+..++++++.+. ..++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~Lii~G~~D~~~p~~~~~~~~~~~~----~~~~ 257 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAK-TFITWGRDDRFVPLDHGLKLLWNID----DARL 257 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSC-EEEEEETTCSSSCTHHHHHHHHHSS----SEEE
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCC-EEEEEECCCCccCHHHHHHHHHHCC----CCeE
Confidence 011 0010 00 01223456677898 9999999999999998888877664 3467
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++++ ++||....+.++.+. ..+.+||.+
T Consensus 258 ~~i~---~~gH~~~~e~p~~~~--~~i~~fl~~ 285 (286)
T 2puj_A 258 HVFS---KCGAWAQWEHADEFN--RLVIDFLRH 285 (286)
T ss_dssp EEES---SCCSCHHHHTHHHHH--HHHHHHHHH
T ss_pred EEeC---CCCCCccccCHHHHH--HHHHHHHhc
Confidence 7887 889975433343332 346788864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=6.5e-16 Score=143.83 Aligned_cols=213 Identities=10% Similarity=0.045 Sum_probs=128.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
...|+||++||.+++. ..|......|+++||.|+.+|+||.|....... ....+++..+.+..+++.- -+
T Consensus 10 ~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~l~~l-~~ 79 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGA--WCWYKIVALMRSSGHNVTALDLGASGINPKQAL-------QIPNFSDYLSPLMEFMASL-PA 79 (267)
T ss_dssp CCCCEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHTS-CT
T ss_pred CCCCeEEEECCCCCCc--chHHHHHHHHHhcCCeEEEeccccCCCCCCcCC-------ccCCHHHHHHHHHHHHHhc-CC
Confidence 4568999999987543 336667788899999999999999987644311 1134455555444444432 13
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh--------hhccCCCCCCCcccc-----------------
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL--------TTMLDPTIPLTTAEW----------------- 395 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~--------~~~~~~~~~~~~~~~----------------- 395 (505)
.+++.++|||+||.+++.++.++|++++++|..++..... ..+...........+
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP 159 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH
T ss_pred CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH
Confidence 5789999999999999999999999999999877643211 000000000000000
Q ss_pred ----cccCCCCCHHHHHHHH-hC--------------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 396 ----EEWGDPWKEEFYFYMK-SY--------------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 396 ----~~~g~~~~~~~~~~~~-~~--------------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
..+.....++....+. .. .+.......++| +|+++|++|..+|+..+.++++.+. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~ 234 (267)
T 3sty_A 160 KFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVK-RVFIVATENDALKKEFLKLMIEKNP----P 234 (267)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSC-EEEEECCCSCHHHHHHHHHHHHHSC----C
T ss_pred HHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCC-EEEEEeCCCCccCHHHHHHHHHhCC----C
Confidence 0000111111111111 01 111111122477 9999999999999988888777663 3
Q ss_pred CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 457 DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.++++++ ++||......++.+. ..+.+|+.++
T Consensus 235 ~~~~~i~---~~gH~~~~e~p~~~~--~~i~~fl~~~ 266 (267)
T 3sty_A 235 DEVKEIE---GSDHVTMMSKPQQLF--TTLLSIANKY 266 (267)
T ss_dssp SEEEECT---TCCSCHHHHSHHHHH--HHHHHHHHHC
T ss_pred ceEEEeC---CCCccccccChHHHH--HHHHHHHHhc
Confidence 5677887 889975433344332 2467788763
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.66 E-value=4.3e-16 Score=146.98 Aligned_cols=223 Identities=17% Similarity=0.140 Sum_probs=130.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
.+|.+++.... ++.|.||++||....... ..|......| ++||.|+.+|+||+|.+...- ..
T Consensus 12 ~~g~~l~y~~~---------G~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~-------~~ 74 (282)
T 1iup_A 12 AAGVLTNYHDV---------GEGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRPE-------NY 74 (282)
T ss_dssp ETTEEEEEEEE---------CCSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCCT-------TC
T ss_pred ECCEEEEEEec---------CCCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCCC-------CC
Confidence 36777754311 224679999995432221 1244444555 678999999999998754311 01
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh------hhccCCCCCCC--
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL------TTMLDPTIPLT-- 391 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~------~~~~~~~~~~~-- 391 (505)
...++++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|..++..... ..... ..+..
T Consensus 75 ~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~ 151 (282)
T 1iup_A 75 NYSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWG-YTPSIEN 151 (282)
T ss_dssp CCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHT-CCSCHHH
T ss_pred CCCHHHHHHHHHHHHHHh--CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhc-CCCcHHH
Confidence 234555555554444432 23689999999999999999999999999999887643210 00000 00000
Q ss_pred ---------------cccc-----cccCCCCCHHHHHHHHh----------CChhhcccCCCCCeEEEEccCCCCCCCCC
Q 010654 392 ---------------TAEW-----EEWGDPWKEEFYFYMKS----------YSPVDNVKAQNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 392 ---------------~~~~-----~~~g~~~~~~~~~~~~~----------~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~ 441 (505)
...+ .....+.....+..+.. ..+...+.++++| +|+++|++|..+|+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~p~~ 230 (282)
T 1iup_A 152 MRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNE-TLIIHGREDQVVPLS 230 (282)
T ss_dssp HHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSC-EEEEEETTCSSSCHH
T ss_pred HHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCC-EEEEecCCCCCCCHH
Confidence 0000 00011110011100000 0011356678898 999999999999998
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.++++++.+. ..++++++ ++||....+.++.+. ..+.+||.+.
T Consensus 231 ~~~~~~~~~~----~~~~~~i~---~~gH~~~~e~p~~~~--~~i~~fl~~~ 273 (282)
T 1iup_A 231 SSLRLGELID----RAQLHVFG---RCGHWTQIEQTDRFN--RLVVEFFNEA 273 (282)
T ss_dssp HHHHHHHHCT----TEEEEEES---SCCSCHHHHSHHHHH--HHHHHHHHTC
T ss_pred HHHHHHHhCC----CCeEEEEC---CCCCCccccCHHHHH--HHHHHHHhcC
Confidence 8888777664 34677887 889975433344332 3577888763
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.5e-16 Score=148.92 Aligned_cols=208 Identities=16% Similarity=0.157 Sum_probs=125.9
Q ss_pred CCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+.|+||++||.++.... |. .....|+++||.|+.+|+||.|..... ....++++.+.+..+++.- +
T Consensus 42 ~~~~vv~lHG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~~~~~l~~l--~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGAGRT--WHPHQVPAFLAAGYRCITFDNRGIGATENA---------EGFTTQTMVADTAALIETL--D 108 (293)
T ss_dssp SSEEEEEECCTTCCGGG--GTTTTHHHHHHTTEEEEEECCTTSGGGTTC---------CSCCHHHHHHHHHHHHHHH--T
T ss_pred CCCEEEEECCCCCchhh--cchhhhhhHhhcCCeEEEEccCCCCCCCCc---------ccCCHHHHHHHHHHHHHhc--C
Confidence 46889999998765433 44 346788899999999999998643211 1123444444444333321 3
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc----------cCCCCCCCcc--c----cccc-----C
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----------LDPTIPLTTA--E----WEEW-----G 399 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----------~~~~~~~~~~--~----~~~~-----g 399 (505)
.+++.++|+|+||.+++.++.++|++++++|+.+|........ .......... . ...+ .
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 3689999999999999999999999999999998864321100 0000000000 0 0000 0
Q ss_pred C---------------C-CCHHHHHHH---HhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 400 D---------------P-WKEEFYFYM---KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 400 ~---------------~-~~~~~~~~~---~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
. . ..+.....+ ...+....+.++++| +|+++|++|..+|+..+.++++.+.. .+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~g~~D~~~~~~~~~~~~~~~~~----~~~~ 263 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAP-VLVIGFADDVVTPPYLGREVADALPN----GRYL 263 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSC-EEEEEETTCSSSCHHHHHHHHHHSTT----EEEE
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCC-EEEEEeCCCCCCCHHHHHHHHHHCCC----ceEE
Confidence 0 0 001110000 011223455777888 99999999999999888888777643 4677
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+++ ++||......++.+ ...+.+||.+
T Consensus 264 ~~~---~~gH~~~~~~p~~~--~~~i~~fl~~ 290 (293)
T 3hss_A 264 QIP---DAGHLGFFERPEAV--NTAMLKFFAS 290 (293)
T ss_dssp EET---TCCTTHHHHSHHHH--HHHHHHHHHT
T ss_pred EeC---CCcchHhhhCHHHH--HHHHHHHHHh
Confidence 777 88997543333322 2346777764
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-15 Score=143.02 Aligned_cols=224 Identities=16% Similarity=0.155 Sum_probs=131.9
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhH-HHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
.||.++++... + ....|.||++||.++... .|.... ..|+++||.|+.+|+||+|.+...- ....
T Consensus 8 ~~g~~l~y~~~---G----~~~~~~vvllHG~~~~~~--~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~-----~~~~ 73 (298)
T 1q0r_A 8 SGDVELWSDDF---G----DPADPALLLVMGGNLSAL--GWPDEFARRLADGGLHVIRYDHRDTGRSTTRD-----FAAH 73 (298)
T ss_dssp ETTEEEEEEEE---S----CTTSCEEEEECCTTCCGG--GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCC-----TTTS
T ss_pred cCCeEEEEEec---c----CCCCCeEEEEcCCCCCcc--chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC-----CCcC
Confidence 47877765422 1 123478999999876543 355534 7888899999999999998764300 0011
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch-hh-hh--------------hc
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-DV-LT--------------TM 383 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d~-~~--------------~~ 383 (505)
...++++.+.+..+++.- +.+++.++|||+||.+++.++.++|++++++|...+.. .. .. ..
T Consensus 74 ~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (298)
T 1q0r_A 74 PYGFGELAADAVAVLDGW--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGL 151 (298)
T ss_dssp CCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCS
T ss_pred CcCHHHHHHHHHHHHHHh--CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhccc
Confidence 133444444444444331 23689999999999999999999999999998876543 20 00 00
Q ss_pred cCCC-----------CC-CCcccc--------ccc---CCCCCHHHH-HH----HHhC-----------------Chhhc
Q 010654 384 LDPT-----------IP-LTTAEW--------EEW---GDPWKEEFY-FY----MKSY-----------------SPVDN 418 (505)
Q Consensus 384 ~~~~-----------~~-~~~~~~--------~~~---g~~~~~~~~-~~----~~~~-----------------sp~~~ 418 (505)
.... .+ .....+ ... ..+.+++.. .. +... +....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T 1q0r_A 152 PGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA 231 (298)
T ss_dssp CCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGG
T ss_pred ccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccccc
Confidence 0000 00 000000 000 011111110 00 0100 01123
Q ss_pred -ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 419 -VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 419 -~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+.++++| +|+++|++|..+|+..++++++.+. ..++++++ ++||.. ++.+ ...+.+||.+++
T Consensus 232 ~l~~i~~P-~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~---~~gHe~----p~~~--~~~i~~fl~~~~ 294 (298)
T 1q0r_A 232 ELREVTVP-TLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIP---GMGHAL----PSSV--HGPLAEVILAHT 294 (298)
T ss_dssp GGGGCCSC-EEEEEETTCSSSCTTHHHHHHHTST----TEEEEEET---TCCSSC----CGGG--HHHHHHHHHHHH
T ss_pred cccccCCC-EEEEEeCCCccCCHHHHHHHHHhCC----CCEEEEcC---CCCCCC----cHHH--HHHHHHHHHHHh
Confidence 5677898 9999999999999998888776654 34677887 889932 2222 224678888765
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.9e-16 Score=149.10 Aligned_cols=231 Identities=18% Similarity=0.178 Sum_probs=130.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
.+|.++.+...-+++. +.+.+.||++||+++.... |......|++ .||.|+.+|.||+|.+...-.. ......
T Consensus 35 ~~g~~l~y~~~G~~~~---~~~g~plvllHG~~~~~~~--w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~-~~~~~~ 108 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA---QPHALPLIVLHGGPGMAHN--YVANIAALADETGRTVIHYDQVGCGNSTHLPDA-PADFWT 108 (330)
T ss_dssp ETTEEEEEEEECCSSC---CTTCCCEEEECCTTTCCSG--GGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTS-CGGGCC
T ss_pred ecCcEEEEEEecCccC---CCCCCcEEEECCCCCCchh--HHHHHHHhccccCcEEEEECCCCCCCCCCCCCC-cccccc
Confidence 3777887654433211 1112358889998776433 4445566776 6999999999999876431000 000011
Q ss_pred -cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---h---c---cCC---
Q 010654 320 -KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---T---M---LDP--- 386 (505)
Q Consensus 320 -~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~---~---~---~~~--- 386 (505)
....+|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|...+...... . + ...
T Consensus 109 ~~~~a~dl~~ll~~l---g---~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (330)
T 3nwo_A 109 PQLFVDEFHAVCTAL---G---IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETR 182 (330)
T ss_dssp HHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHc---C---CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHH
Confidence 12234444444443 2 26899999999999999999999999999887765322100 0 0 000
Q ss_pred --------CCCCCcccc--------cc-cC--CCCCHHHHHHHH-------------------------hCChhhcccCC
Q 010654 387 --------TIPLTTAEW--------EE-WG--DPWKEEFYFYMK-------------------------SYSPVDNVKAQ 422 (505)
Q Consensus 387 --------~~~~~~~~~--------~~-~g--~~~~~~~~~~~~-------------------------~~sp~~~~~~~ 422 (505)
........+ .. .. .+........+. ..+....+.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 262 (330)
T 3nwo_A 183 AALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDV 262 (330)
T ss_dssp HHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGC
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccC
Confidence 000000000 00 00 111111111110 11223446677
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
++| +|+++|++|..+| ..+.++++.+ ...++++++ ++||....+.++.+. ..+.+||.++-
T Consensus 263 ~~P-~Lvi~G~~D~~~p-~~~~~~~~~i----p~~~~~~i~---~~gH~~~~e~p~~~~--~~i~~FL~~~~ 323 (330)
T 3nwo_A 263 TAP-VLVIAGEHDEATP-KTWQPFVDHI----PDVRSHVFP---GTSHCTHLEKPEEFR--AVVAQFLHQHD 323 (330)
T ss_dssp CSC-EEEEEETTCSSCH-HHHHHHHHHC----SSEEEEEET---TCCTTHHHHSHHHHH--HHHHHHHHHHH
T ss_pred CCC-eEEEeeCCCccCh-HHHHHHHHhC----CCCcEEEeC---CCCCchhhcCHHHHH--HHHHHHHHhcc
Confidence 898 9999999999876 3555555444 345778888 899976544444433 35788998753
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-16 Score=148.18 Aligned_cols=209 Identities=14% Similarity=0.120 Sum_probs=126.3
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 321 (505)
||.++..... + ....|+||++||+++... .|......| ++||.|+.+|+||.|..... ....
T Consensus 18 ~g~~l~~~~~---g----~~~~~~vl~lHG~~~~~~--~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~--------~~~~ 79 (299)
T 3g9x_A 18 LGERMHYVDV---G----PRDGTPVLFLHGNPTSSY--LWRNIIPHV-APSHRCIAPDLIGMGKSDKP--------DLDY 79 (299)
T ss_dssp TTEEEEEEEE---S----CSSSCCEEEECCTTCCGG--GGTTTHHHH-TTTSCEEEECCTTSTTSCCC--------CCCC
T ss_pred CCeEEEEEec---C----CCCCCEEEEECCCCccHH--HHHHHHHHH-ccCCEEEeeCCCCCCCCCCC--------CCcc
Confidence 7877765422 1 123578999999876543 355555666 46999999999998875431 1134
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-------------hccCCC-
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-------------TMLDPT- 387 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-------------~~~~~~- 387 (505)
.++++.+.+..+++.- +.+++.++|||+||.+++.++.++|++++++|+.++...... .+....
T Consensus 80 ~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (299)
T 3g9x_A 80 FFDDHVRYLDAFIEAL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADV 157 (299)
T ss_dssp CHHHHHHHHHHHHHHT--TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSH
T ss_pred cHHHHHHHHHHHHHHh--CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCc
Confidence 5566666666555542 346899999999999999999999999999998764322110 000000
Q ss_pred ---------------------CCCCcccc----cccCCC-CCHHHHHHHHhC--------------ChhhcccCCCCCeE
Q 010654 388 ---------------------IPLTTAEW----EEWGDP-WKEEFYFYMKSY--------------SPVDNVKAQNYPHI 427 (505)
Q Consensus 388 ---------------------~~~~~~~~----~~~g~~-~~~~~~~~~~~~--------------sp~~~~~~~~~Pp~ 427 (505)
..+..... ..+..+ .......++... +....+.++++| +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~ 236 (299)
T 3g9x_A 158 GRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVP-K 236 (299)
T ss_dssp HHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSC-E
T ss_pred chhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCC-e
Confidence 00000000 000011 001111111111 111224567888 9
Q ss_pred EEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHH
Q 010654 428 LVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 478 (505)
Q Consensus 428 Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 478 (505)
|+++|++|..+|+..+.++++.+. .+++++++ ++||......++
T Consensus 237 l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~gH~~~~e~p~ 280 (299)
T 3g9x_A 237 LLFWGTPGVLIPPAEAARLAESLP----NCKTVDIG---PGLHYLQEDNPD 280 (299)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHST----TEEEEEEE---EESSCHHHHCHH
T ss_pred EEEecCCCCCCCHHHHHHHHhhCC----CCeEEEeC---CCCCcchhcCHH
Confidence 999999999999988888877764 35677888 779975433333
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.6e-16 Score=143.99 Aligned_cols=207 Identities=13% Similarity=0.051 Sum_probs=123.6
Q ss_pred CCCcEEEEEcCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCC------------------Cc--hhHHHcccccC
Q 010654 261 GSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGE------------------LG--RQWYENGKFLK 318 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~rG~~~------------------~g--~~~~~~~~~~~ 318 (505)
.+.|.||++||..++.... .+......|.++||.|+.+|.++... .| ..|.. ..
T Consensus 3 ~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~----~~ 78 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFY----HS 78 (243)
T ss_dssp CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSC----CC
T ss_pred CcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCccccc----CC
Confidence 3568999999976543211 01123345666799999999993321 01 11110 00
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC------CceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP------DLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p------~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
......|+.++++++.+....+..+++|+|+|+||.+++.++.+++ ..+++++..+++....... ..+.
T Consensus 79 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---~~~~-- 153 (243)
T 1ycd_A 79 EISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---EHPG-- 153 (243)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---TSTT--
T ss_pred CCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---cccc--
Confidence 1123456666666666543234568999999999999999988643 2466777766654321100 0000
Q ss_pred ccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC---CCCCeEEEEecCCCC
Q 010654 393 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK---TDDNILLFKCELGAG 469 (505)
Q Consensus 393 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~---~~~~~~~~~~~~~~g 469 (505)
.. .+.. + + ...+..+.++++| +|++||++|+.||+.+++++++.++..+ .....++++ ++|
T Consensus 154 -~~-~~~~----~-~-----~~~~~~~~~~~~P-~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~g 217 (243)
T 1ycd_A 154 -EL-RITE----K-F-----RDSFAVKPDMKTK-MIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEH---PGG 217 (243)
T ss_dssp -CE-EECG----G-G-----TTTTCCCTTCCCE-EEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEE---SSS
T ss_pred -cc-ccch----h-H-----HHhccCcccCCCC-EEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEec---CCC
Confidence 00 0000 0 0 0122234556776 9999999999999999999999998762 122344555 679
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|...... .....+.+||.++++.
T Consensus 218 H~~~~~~----~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 218 HMVPNKK----DIIRPIVEQITSSLQE 240 (243)
T ss_dssp SSCCCCH----HHHHHHHHHHHHHHC-
T ss_pred CcCCchH----HHHHHHHHHHHHhhhh
Confidence 9875432 2344588999998864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-15 Score=142.67 Aligned_cols=225 Identities=15% Similarity=0.092 Sum_probs=131.0
Q ss_pred CCCC-ceeeEEEEEeCCccCCCCCCcEEEEEcCC-CCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 240 ASDG-TQIPICIVYRKNLVKLDGSDPLLLYGYGS-YEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 240 s~dG-~~i~~~l~~p~~~~~~~~~~P~iv~~hGg-~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
..+| .+++... . + .++.|.||++||. ++......|......|+++ |.|+.+|+||+|.+... .
T Consensus 19 ~~~g~~~l~y~~-~--G----~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-------~ 83 (291)
T 2wue_A 19 DVDGPLKLHYHE-A--G----VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKR-------A 83 (291)
T ss_dssp ESSSEEEEEEEE-E--C----TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTSTTSCCC-------S
T ss_pred EeCCcEEEEEEe-c--C----CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCCCCCCCC-------C
Confidence 3478 7776542 1 1 1334689999997 4322222355555667665 99999999999876431 1
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh---------------hh
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL---------------TT 382 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~---------------~~ 382 (505)
.....++++.+.+..+++.- +.+++.++|||+||.+++.++.++|++++++|..++..... ..
T Consensus 84 ~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
T 2wue_A 84 EHGQFNRYAAMALKGLFDQL--GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKF 161 (291)
T ss_dssp CCSSHHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHh--CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHH
Confidence 11234555555554444431 23689999999999999999999999999999887643100 00
Q ss_pred ccCCCCCCCcccccc-cCCC---------------CCHHHHHHHHh-----CC-----hh--hcccCCCCCeEEEEccCC
Q 010654 383 MLDPTIPLTTAEWEE-WGDP---------------WKEEFYFYMKS-----YS-----PV--DNVKAQNYPHILVTAGLN 434 (505)
Q Consensus 383 ~~~~~~~~~~~~~~~-~g~~---------------~~~~~~~~~~~-----~s-----p~--~~~~~~~~Pp~Li~~G~~ 434 (505)
+.............. ...+ .+++.+..+.. .+ +. ..+.++++| +|+++|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~ 240 (291)
T 2wue_A 162 SVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQP-VLLIWGRE 240 (291)
T ss_dssp HHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSC-EEEEEETT
T ss_pred hccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCC-eEEEecCC
Confidence 000000000000000 0000 01111111110 11 11 456677898 99999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 435 DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 435 D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
|..+|+..++++++.+. ..++++++ ++||....+.++.+. ..+.+||.
T Consensus 241 D~~~~~~~~~~~~~~~p----~~~~~~i~---~~gH~~~~e~p~~~~--~~i~~fl~ 288 (291)
T 2wue_A 241 DRVNPLDGALVALKTIP----RAQLHVFG---QCGHWVQVEKFDEFN--KLTIEFLG 288 (291)
T ss_dssp CSSSCGGGGHHHHHHST----TEEEEEES---SCCSCHHHHTHHHHH--HHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCC----CCeEEEeC---CCCCChhhhCHHHHH--HHHHHHHh
Confidence 99999999988877664 34677787 889975433333322 24667764
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.64 E-value=5e-16 Score=151.51 Aligned_cols=113 Identities=15% Similarity=0.109 Sum_probs=80.9
Q ss_pred CCCcEEEEEcCCCCcCCC---CCCc-----------hhHHHHHHCCcEEEEEcccCCCCCchhHHH-cccc-cCC-cchH
Q 010654 261 GSDPLLLYGYGSYEICND---PAFN-----------SSRLSLLDRGFIFAIAQIRGGGELGRQWYE-NGKF-LKK-KNTF 323 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~---~~~~-----------~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~-~~~~-~~~-~~~~ 323 (505)
++.|+||++||+++.... ..|. .....|+++||.|+.+|+||.|........ .+.. ... ....
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHH
Confidence 346899999998765421 0122 456788899999999999998765421110 0000 111 2346
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCC
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVP 375 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~ 375 (505)
+|+.++++++.++ .+.+++.++|+|+||.+++.++.++ |++++++|+.++
T Consensus 128 ~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 128 SDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecc
Confidence 7888899988765 3447899999999999999999988 999999998854
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-14 Score=139.38 Aligned_cols=124 Identities=19% Similarity=0.148 Sum_probs=82.1
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
...+...||.++..... .+ .+.|.||++||+++..... .....+...||.|+.+|+||+|.+...
T Consensus 16 ~~~~~~~~g~~l~~~~~-g~------~~g~~vvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~G~S~~~----- 80 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELS-GN------PNGKPAVFIHGGPGGGISP---HHRQLFDPERYKVLLFDQRGCGRSRPH----- 80 (317)
T ss_dssp EEEEECSSSCEEEEEEE-EC------TTSEEEEEECCTTTCCCCG---GGGGGSCTTTEEEEEECCTTSTTCBST-----
T ss_pred eeEEEcCCCcEEEEEEc-CC------CCCCcEEEECCCCCcccch---hhhhhccccCCeEEEECCCCCCCCCCC-----
Confidence 33566678888754321 11 1236689999987644321 112334457999999999999876421
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.......+.++.+.+..+++.- +.+++.++|||+||.+++.++.++|++++++|...+.
T Consensus 81 -~~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 81 -ASLDNNTTWHLVADIERLREMA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp -TCCTTCSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHHc--CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 0111234455555555555542 2368999999999999999999999999999987653
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=142.64 Aligned_cols=208 Identities=13% Similarity=0.108 Sum_probs=123.1
Q ss_pred cEEEEEcCCC-CcCCCCCCchhH-HHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 264 PLLLYGYGSY-EICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 264 P~iv~~hGg~-~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
|.||++||.. +......|.... ..|++ +|.|+.+|+||+|.+... ......++++.+.+..+++.- +.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~l--~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSV-------VNSGSRSDLNARILKSVVDQL--DI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHHT--TC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHh--CC
Confidence 4899999964 222222344445 45554 599999999999876431 111245666666665555542 23
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC-C-----------CCCCCc--ccc-cc-cCCC--CC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD-P-----------TIPLTT--AEW-EE-WGDP--WK 403 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~-----------~~~~~~--~~~-~~-~g~~--~~ 403 (505)
+++.++|||+||.+++.++.++|++++++|..++.......... . ..+... ..+ .. ...+ ..
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 68999999999999999999999999999987764310000000 0 000000 000 00 0001 00
Q ss_pred HH--------------HHH----HHHh-----CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 404 EE--------------FYF----YMKS-----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 404 ~~--------------~~~----~~~~-----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
++ ... .+.. .+....+.++++| +|+++|++|..+|+..+.++++.+. ..+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~ 261 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQ-TLIVWGRNDRFVPMDAGLRLLSGIA----GSELH 261 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSC-EEEEEETTCSSSCTHHHHHHHHHST----TCEEE
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCC-eEEEeeCCCCccCHHHHHHHHhhCC----CcEEE
Confidence 11 111 0000 1122456677898 9999999999999998888877664 34677
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+++ ++||....+.++.+. ..+.+||.
T Consensus 262 ~i~---~~gH~~~~e~p~~~~--~~i~~fl~ 287 (289)
T 1u2e_A 262 IFR---DCGHWAQWEHADAFN--QLVLNFLA 287 (289)
T ss_dssp EES---SCCSCHHHHTHHHHH--HHHHHHHT
T ss_pred EeC---CCCCchhhcCHHHHH--HHHHHHhc
Confidence 887 889975433333322 24667764
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.1e-15 Score=139.88 Aligned_cols=210 Identities=15% Similarity=0.104 Sum_probs=124.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|+++||.|+.+|.||+|.+...- ......++++.+.+..+++.- +.+
T Consensus 47 g~~vvllHG~~~~~~--~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~------~~~~y~~~~~a~dl~~ll~~l--~~~ 116 (310)
T 1b6g_A 47 EDVFLCLHGEPTWSY--LYRKMIPVFAESGARVIAPDFFGFGKSDKPV------DEEDYTFEFHRNFLLALIERL--DLR 116 (310)
T ss_dssp SCEEEECCCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCEES------CGGGCCHHHHHHHHHHHHHHH--TCC
T ss_pred CCEEEEECCCCCchh--hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC------CcCCcCHHHHHHHHHHHHHHc--CCC
Confidence 478999999876543 4666677899999999999999998764310 001123444444444333321 126
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh--hh--------------------hhcc-CCCCC----------
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD--VL--------------------TTML-DPTIP---------- 389 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d--~~--------------------~~~~-~~~~~---------- 389 (505)
++.++|||+||.+++.++.++|++++++|...+... .. .... .....
T Consensus 117 ~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (310)
T 1b6g_A 117 NITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAP 196 (310)
T ss_dssp SEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHST
T ss_pred CEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHHhccCchhhhhhHHhhcCC
Confidence 899999999999999999999999999988765331 00 0000 00000
Q ss_pred -CCccccccc----CCCC-CHHHHHHHHh-CC-----------hhhccc-CCCCCeEEEEccCCCCCCCCChHHHHHHHH
Q 010654 390 -LTTAEWEEW----GDPW-KEEFYFYMKS-YS-----------PVDNVK-AQNYPHILVTAGLNDPRVMYSEPAKFVAKL 450 (505)
Q Consensus 390 -~~~~~~~~~----g~~~-~~~~~~~~~~-~s-----------p~~~~~-~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L 450 (505)
+.......+ ..+. ......+... .. ....+. ++++| +|+++|++|..+| ..+.++.+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P-~Lvi~G~~D~~~~-~~~~~~~~~i 274 (310)
T 1b6g_A 197 TLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQ-TFMAIGMKDKLLG-PDVMYPMKAL 274 (310)
T ss_dssp TCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSE-EEEEEETTCSSSS-HHHHHHHHHH
T ss_pred CCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCc-eEEEeccCcchhh-hHHHHHHHhc
Confidence 000000000 0000 0000000000 00 012345 78897 9999999999999 8888887777
Q ss_pred HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 451 REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.... ...++++ ++||.... .++.+.. .+.+||.+
T Consensus 275 p~~~--~~~i~~~---~~GH~~~~-~p~~~~~--~i~~Fl~~ 308 (310)
T 1b6g_A 275 INGC--PEPLEIA---DAGHFVQE-FGEQVAR--EALKHFAE 308 (310)
T ss_dssp STTC--CCCEEET---TCCSCGGG-GHHHHHH--HHHHHHHH
T ss_pred cccc--ceeeecC---Ccccchhh-ChHHHHH--HHHHHHhc
Confidence 5432 2223347 89998766 6665444 57888864
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.4e-15 Score=141.17 Aligned_cols=209 Identities=13% Similarity=0.094 Sum_probs=121.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|+++||.|+.+|.||+|.+...- ......++++.+.+..+++.- +.+
T Consensus 46 g~~vvllHG~~~~~~--~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~------~~~~~~~~~~a~dl~~ll~~l--~~~ 115 (297)
T 2xt0_A 46 EHTFLCLHGEPSWSF--LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT------DDAVYTFGFHRRSLLAFLDAL--QLE 115 (297)
T ss_dssp SCEEEEECCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCEES------CGGGCCHHHHHHHHHHHHHHH--TCC
T ss_pred CCeEEEECCCCCcce--eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC------CcccCCHHHHHHHHHHHHHHh--CCC
Confidence 478999999876433 3566677888999999999999998764310 001123444444333333321 126
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh-----------hhhhcc-CCCCC-----------CCcccccccC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD-----------VLTTML-DPTIP-----------LTTAEWEEWG 399 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d-----------~~~~~~-~~~~~-----------~~~~~~~~~g 399 (505)
++.++|||+||.+++.++.++|++++++|...+... +..... ..... +.......+.
T Consensus 116 ~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (297)
T 2xt0_A 116 RVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYD 195 (297)
T ss_dssp SEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHH
T ss_pred CEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhHHHhccCccCCHHHHHHHh
Confidence 899999999999999999999999999998776321 000000 00000 0000000000
Q ss_pred ----CCCCHHHHHHHHhC--------------Chhhccc-CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 400 ----DPWKEEFYFYMKSY--------------SPVDNVK-AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 400 ----~~~~~~~~~~~~~~--------------sp~~~~~-~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
.+........+... .....+. ++++| +|+++|++|..+| ..+.++.+.+.... ...+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P-~Lvi~G~~D~~~~-~~~~~~~~~~p~~~--~~~~ 271 (297)
T 2xt0_A 196 APFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGP-TFMAVGAQDPVLG-PEVMGMLRQAIRGC--PEPM 271 (297)
T ss_dssp TTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSC-EEEEEETTCSSSS-HHHHHHHHHHSTTC--CCCE
T ss_pred ccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCC-eEEEEeCCCcccC-hHHHHHHHhCCCCe--eEEe
Confidence 00000000000000 0112345 78898 9999999999998 77888877765432 2223
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
.++ ++||.... .++.+.. .+.+||.
T Consensus 272 ~~~---~~GH~~~~-~p~~~~~--~i~~fl~ 296 (297)
T 2xt0_A 272 IVE---AGGHFVQE-HGEPIAR--AALAAFG 296 (297)
T ss_dssp EET---TCCSSGGG-GCHHHHH--HHHHHTT
T ss_pred ccC---CCCcCccc-CHHHHHH--HHHHHHh
Confidence 355 88998765 5554433 4667763
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=9.6e-15 Score=140.77 Aligned_cols=121 Identities=21% Similarity=0.291 Sum_probs=81.0
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
..+|.+++.... ++.|.||++||.++.. ..|......|+++||.|+.+|.||.|.+...-........-
T Consensus 17 ~~~g~~l~y~~~---------G~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~ 85 (328)
T 2cjp_A 17 AVNGLNMHLAEL---------GEGPTILFIHGFPELW--YSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSI 85 (328)
T ss_dssp EETTEEEEEEEE---------CSSSEEEEECCTTCCG--GGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSH
T ss_pred cCCCcEEEEEEc---------CCCCEEEEECCCCCch--HHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccH
Confidence 347777754421 1247899999987653 23666667888899999999999998764320000000011
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
....+|+.+.++.+ +. +.+++.++|||+||.+++.++.++|++++++|..++
T Consensus 86 ~~~a~dl~~~l~~l---~~-~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~ 137 (328)
T 2cjp_A 86 LHLVGDVVALLEAI---AP-NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137 (328)
T ss_dssp HHHHHHHHHHHHHH---CT-TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred HHHHHHHHHHHHHh---cC-CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEcc
Confidence 12334555555544 21 246899999999999999999999999999988653
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=140.83 Aligned_cols=205 Identities=14% Similarity=0.097 Sum_probs=121.9
Q ss_pred CCcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEc----ccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc
Q 010654 262 SDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQ----IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d----~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
..|+||++||......... |......| ++||.|+.+| +||+|.+... ....|+.++++++.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~-----------~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHA-----------HDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHH-----------HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcccc-----------CcHHHHHHHHHHHHHH
Confidence 3588999999654433222 23334455 7899999995 5777764321 2467888888888774
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHh--hCCCceeEEEecCCchhhhh----------------hccCCCCCCCccccc-c
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLN--MRPDLFKAAVAAVPFVDVLT----------------TMLDPTIPLTTAEWE-E 397 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~--~~p~~~~a~v~~~~~~d~~~----------------~~~~~~~~~~~~~~~-~ 397 (505)
.+.+++.++||||||.+++.++. .+|++++++|+.+|..+... .+............. .
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKH 182 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCGGGGTTT
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCccccccchhh
Confidence 34578999999999999999988 47999999998877543110 000000000000000 0
Q ss_pred cCCCCCHH-------------HHHHHH---hCChhhcccCCCCCeEEEEccCCCCCCCCCh-HHHHHHHHHhcCCCCC--
Q 010654 398 WGDPWKEE-------------FYFYMK---SYSPVDNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLREMKTDDN-- 458 (505)
Q Consensus 398 ~g~~~~~~-------------~~~~~~---~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~-~~~~~~~L~~~~~~~~-- 458 (505)
+..+.... .+.... ..+....+.++++| +|+++|++|..+|+.. ...+.+.+.+.-...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-tLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~~~~ 261 (335)
T 2q0x_A 183 YDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVP-LLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCNRVT 261 (335)
T ss_dssp CSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSC-EEEEEECCTTCCCCHHHHHHHHHHHHHHSSSSCEE
T ss_pred ccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCC-eEEEEecCCCCCChhhhHHHHHHHHHHhcCccccc
Confidence 00111110 010000 00122456778898 9999999999999875 2344455554433333
Q ss_pred ------e-----EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 459 ------I-----LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 459 ------~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+ ++++ ++|| + ....+.+||.+..
T Consensus 262 ~~~~~~~~~~~~~~i~---~agH-------e---~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 262 VSYFNDTCDELRRVLK---AAES-------E---HVAAILQFLADED 295 (335)
T ss_dssp EEECCCEECTTSCEEE---CCHH-------H---HHHHHHHHHHHHH
T ss_pred cccccchhhhhhcccC---CCCC-------H---HHHHHHHHHHhhh
Confidence 4 6788 8899 1 1445788987653
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.2e-15 Score=138.83 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=130.5
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.++++...-++ +.+.|.||++||.++... .|......|++ +|.|+.+|+||+|.+.... ..
T Consensus 9 ~~g~~l~y~~~g~~-----~~~~~~vvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~--------~~ 72 (266)
T 2xua_A 9 VNGTELHYRIDGER-----HGNAPWIVLSNSLGTDLS--MWAPQVAALSK-HFRVLRYDTRGHGHSEAPK--------GP 72 (266)
T ss_dssp CSSSEEEEEEESCS-----SSCCCEEEEECCTTCCGG--GGGGGHHHHHT-TSEEEEECCTTSTTSCCCS--------SC
T ss_pred ECCEEEEEEEcCCc-----cCCCCeEEEecCccCCHH--HHHHHHHHHhc-CeEEEEecCCCCCCCCCCC--------CC
Confidence 47888876533111 112588999999765433 36666667754 5999999999998764311 11
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh------hhh---ccCCCCC-C
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV------LTT---MLDPTIP-L 390 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~------~~~---~~~~~~~-~ 390 (505)
..++++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|...+.... ... ....... .
T Consensus 73 ~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 2xua_A 73 YTIEQLTGDVLGLMDTL--KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHAL 150 (266)
T ss_dssp CCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHH
T ss_pred CCHHHHHHHHHHHHHhc--CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHH
Confidence 33444444444444332 2358999999999999999999999999999987664211 100 0000000 0
Q ss_pred Cc---ccc--cccC--CC------------CCHHH----HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHH
Q 010654 391 TT---AEW--EEWG--DP------------WKEEF----YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFV 447 (505)
Q Consensus 391 ~~---~~~--~~~g--~~------------~~~~~----~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~ 447 (505)
.. ..+ ..+. .+ ..+.. ...+...+....+.++++| +|+++|++|..+|+..+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~~~ 229 (266)
T 2xua_A 151 ADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVP-ALVISGTHDLAATPAQGRELA 229 (266)
T ss_dssp HHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSC-EEEEEETTCSSSCHHHHHHHH
T ss_pred HHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCC-EEEEEcCCCCcCCHHHHHHHH
Confidence 00 000 0000 00 00111 1112233344556778998 999999999999998888877
Q ss_pred HHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 448 AKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 448 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+.+.. .++++++ +||....+.++.+ ...+.+||.
T Consensus 230 ~~~~~----~~~~~~~----~gH~~~~e~p~~~--~~~i~~fl~ 263 (266)
T 2xua_A 230 QAIAG----ARYVELD----ASHISNIERADAF--TKTVVDFLT 263 (266)
T ss_dssp HHSTT----CEEEEES----CCSSHHHHTHHHH--HHHHHHHHT
T ss_pred HhCCC----CEEEEec----CCCCchhcCHHHH--HHHHHHHHH
Confidence 76643 4666775 5897543333332 234677875
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.4e-15 Score=140.23 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=85.2
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
...+|.+++.... ++.|.||++||.++... .|......|.+ ||.|+.+|+||.|....... ....
T Consensus 18 ~~~~g~~l~~~~~---------g~~~~vv~lHG~~~~~~--~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~---~~~~ 82 (306)
T 3r40_A 18 INTSSGRIFARVG---------GDGPPLLLLHGFPQTHV--MWHRVAPKLAE-RFKVIVADLPGYGWSDMPES---DEQH 82 (306)
T ss_dssp ECCTTCCEEEEEE---------ECSSEEEEECCTTCCGG--GGGGTHHHHHT-TSEEEEECCTTSTTSCCCCC---CTTC
T ss_pred EEeCCEEEEEEEc---------CCCCeEEEECCCCCCHH--HHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCC---Cccc
Confidence 4458888865421 13479999999876543 36666677777 99999999999987543211 0000
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
....++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|..++.
T Consensus 83 ~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 138 (306)
T 3r40_A 83 TPYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138 (306)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCC
Confidence 123456666555555554 23468999999999999999999999999999998864
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.6e-15 Score=129.73 Aligned_cols=168 Identities=13% Similarity=0.102 Sum_probs=113.2
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|.||++||..+.... .|......+...+ +.++.+|.+. ..++++.+.+..+++. .+
T Consensus 16 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~---~~v~~~~~~~---------------~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDE-HWQSHWERRFPHW---QRIRQREWYQ---------------ADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCCTT-SHHHHHHHHCTTS---EECCCSCCSS---------------CCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCchh-hHHHHHHHhcCCe---EEEeccCCCC---------------cCHHHHHHHHHHHHHh--cC-
Confidence 46899999998755422 3333333333333 4456665321 2345555555555554 23
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
+++.++|+|+||.+++.++.++|++++++|+.+|.......+ +. .....+
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-----------------~~-------------~~~~~~ 123 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI-----------------DD-------------RIQASP 123 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC-----------------TT-------------TSCSSC
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC-----------------cc-------------cccccc
Confidence 789999999999999999999999999999999976532110 00 023455
Q ss_pred CCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC----ChHHHHHHHHHHHHHHHHh
Q 010654 422 QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS----GRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 422 ~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~~fl~~~ 493 (505)
+++| +|+++|++|..+|+.+++++++.+ ..++++++ ++||.... ..++. ...+.+||.+.
T Consensus 124 ~~~P-~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~---~~gH~~~~~~~~~~~~~---~~~i~~fl~~~ 187 (191)
T 3bdv_A 124 LSVP-TLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVG---EAGHINAEAGFGPWEYG---LKRLAEFSEIL 187 (191)
T ss_dssp CSSC-EEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECC---SCTTSSGGGTCSSCHHH---HHHHHHHHHTT
T ss_pred CCCC-EEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeC---CCCcccccccchhHHHH---HHHHHHHHHHh
Confidence 6777 999999999999999999988876 35677887 88997643 22222 24577788764
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.6e-16 Score=148.72 Aligned_cols=206 Identities=16% Similarity=0.114 Sum_probs=121.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+||++||.++... .|.. .+...||.|+.+|+||.|..... ......++++.+.+..+++. .+.+
T Consensus 81 ~~~vv~~hG~~~~~~--~~~~---~~~~lg~~Vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~ 146 (330)
T 3p2m_A 81 APRVIFLHGGGQNAH--TWDT---VIVGLGEPALAVDLPGHGHSAWR-------EDGNYSPQLNSETLAPVLRE--LAPG 146 (330)
T ss_dssp CCSEEEECCTTCCGG--GGHH---HHHHSCCCEEEECCTTSTTSCCC-------SSCBCCHHHHHHHHHHHHHH--SSTT
T ss_pred CCeEEEECCCCCccc--hHHH---HHHHcCCeEEEEcCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHH--hCCC
Confidence 478999999876432 2433 23334999999999998865421 11223445555555554443 2346
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc---cCCCCC---C-----Cccccc----c--cCCC-CCH
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---LDPTIP---L-----TTAEWE----E--WGDP-WKE 404 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~---~~~~~~---~-----~~~~~~----~--~g~~-~~~ 404 (505)
++.++|||+||.+++.++.++|++++++|+.+|........ ...... . ....+. . ...+ ...
T Consensus 147 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (330)
T 3p2m_A 147 AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDV 226 (330)
T ss_dssp CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCH
T ss_pred CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCH
Confidence 89999999999999999999999999999998765422110 000000 0 000000 0 0011 111
Q ss_pred HH-HHHHHhCC-----------------------hhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCC-e
Q 010654 405 EF-YFYMKSYS-----------------------PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN-I 459 (505)
Q Consensus 405 ~~-~~~~~~~s-----------------------p~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~-~ 459 (505)
+. ...+.... ....+.++++| +|+++|++|..+|++.++++++.+.. .+ +
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~v~~~~~~~l~~~~~~----~~~~ 301 (330)
T 3p2m_A 227 KSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAP-ITLVRGGSSGFVTDQDTAELHRRATH----FRGV 301 (330)
T ss_dssp HHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSC-EEEEEETTCCSSCHHHHHHHHHHCSS----EEEE
T ss_pred HHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCC-EEEEEeCCCCCCCHHHHHHHHHhCCC----CeeE
Confidence 11 11111000 01235567888 99999999999999888888776643 35 6
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++++ ++||......++.+ ...+.+||.+
T Consensus 302 ~~i~---~~gH~~~~e~p~~~--~~~i~~fl~~ 329 (330)
T 3p2m_A 302 HIVE---KSGHSVQSDQPRAL--IEIVRGVLDT 329 (330)
T ss_dssp EEET---TCCSCHHHHCHHHH--HHHHHHHTTC
T ss_pred EEeC---CCCCCcchhCHHHH--HHHHHHHHhc
Confidence 7777 88997543333322 2246677653
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-15 Score=147.71 Aligned_cols=112 Identities=15% Similarity=0.084 Sum_probs=77.0
Q ss_pred CcEEEEEcCCCCcCCCC-------CCchhHH---HHHHCCcEEEEEcccC-CCCCchhHH-Hc--cc---ccCCcchHHH
Q 010654 263 DPLLLYGYGSYEICNDP-------AFNSSRL---SLLDRGFIFAIAQIRG-GGELGRQWY-EN--GK---FLKKKNTFTD 325 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~-------~~~~~~~---~l~~~G~~v~~~d~rG-~~~~g~~~~-~~--~~---~~~~~~~~~D 325 (505)
.|+||++||.++..... .|..... .|+++||.|+.+|+|| .|+....-. .. +. .......++|
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQD 138 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHH
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHH
Confidence 58999999987665430 1443332 3668899999999999 454422100 00 00 0011246777
Q ss_pred HHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 326 FIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+.+.+..+++.- +.+++. ++|+|+||.+++.++.++|++++++|+.++.
T Consensus 139 ~~~~l~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 188 (377)
T 2b61_A 139 IVKVQKALLEHL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSS 188 (377)
T ss_dssp HHHHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCC
T ss_pred HHHHHHHHHHHc--CCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccC
Confidence 777777766542 346887 9999999999999999999999999998874
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.3e-14 Score=135.87 Aligned_cols=124 Identities=16% Similarity=0.027 Sum_probs=81.7
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
...+...||.+++....-+ .+.|.||++||+++..... .....|..+||.|+.+|.||+|.+...
T Consensus 13 ~~~~~~~~g~~l~y~~~G~-------~~g~pvvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~G~S~~~----- 77 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGN-------PHGKPVVMLHGGPGGGCND---KMRRFHDPAKYRIVLFDQRGSGRSTPH----- 77 (313)
T ss_dssp EEEEECSSSCEEEEEEEEC-------TTSEEEEEECSTTTTCCCG---GGGGGSCTTTEEEEEECCTTSTTSBST-----
T ss_pred cceEEcCCCCEEEEEecCC-------CCCCeEEEECCCCCccccH---HHHHhcCcCcceEEEECCCCCcCCCCC-----
Confidence 3345666888776432211 1236689999987644221 112334457999999999999876431
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.......++++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|...+.
T Consensus 78 -~~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 78 -ADLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp -TCCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 0111233455555555555442 2358999999999999999999999999999987653
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=140.93 Aligned_cols=212 Identities=13% Similarity=0.118 Sum_probs=123.7
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|++ +|.|+.+|+||+|.+...-. .......++++.+.+..+++. .+.+
T Consensus 20 ~~~vvllHG~~~~~~--~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~----~~~~~~~~~~~a~dl~~~l~~--l~~~ 90 (271)
T 1wom_A 20 KASIMFAPGFGCDQS--VWNAVAPAFEE-DHRVILFDYVGSGHSDLRAY----DLNRYQTLDGYAQDVLDVCEA--LDLK 90 (271)
T ss_dssp SSEEEEECCTTCCGG--GGTTTGGGGTT-TSEEEECCCSCCSSSCCTTC----CTTGGGSHHHHHHHHHHHHHH--TTCS
T ss_pred CCcEEEEcCCCCchh--hHHHHHHHHHh-cCeEEEECCCCCCCCCCCcc----cccccccHHHHHHHHHHHHHH--cCCC
Confidence 378999999765433 34444455654 79999999999987643110 000112344444333333332 1236
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh---ccCCCCCC------------Cccccc------ccCCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---MLDPTIPL------------TTAEWE------EWGDP 401 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~---~~~~~~~~------------~~~~~~------~~g~~ 401 (505)
++.++|||+||.+++.++.++|++++++|...+....... +.. .... ....|. ..+.+
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYG-GFEEEQLLGLLEMMEKNYIGWATVFAATVLNQP 169 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEEC-SBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCT
T ss_pred CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhcc-CCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999988764210000 000 0000 000000 01111
Q ss_pred CCHHHH----HHHH---------------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 402 WKEEFY----FYMK---------------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 402 ~~~~~~----~~~~---------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
..++.. ..+. ..+....+.++++| +|+++|++|..+|+..++.+.+.+. ..+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i 244 (271)
T 1wom_A 170 DRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVP-SLILQCADDIIAPATVGKYMHQHLP----YSSLKQM 244 (271)
T ss_dssp TCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSC-EEEEEEETCSSSCHHHHHHHHHHSS----SEEEEEE
T ss_pred CchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCC-EEEEEcCCCCcCCHHHHHHHHHHCC----CCEEEEe
Confidence 111111 0111 11222345678898 9999999999999887777766554 3567888
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 463 KCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+ ++||....+.++.+. ..+.+||.+++
T Consensus 245 ~---~~gH~~~~e~p~~~~--~~i~~fl~~~~ 271 (271)
T 1wom_A 245 E---ARGHCPHMSHPDETI--QLIGDYLKAHV 271 (271)
T ss_dssp E---EESSCHHHHCHHHHH--HHHHHHHHHHC
T ss_pred C---CCCcCccccCHHHHH--HHHHHHHHhcC
Confidence 8 779975433343332 35788988753
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.2e-14 Score=131.95 Aligned_cols=217 Identities=11% Similarity=0.029 Sum_probs=135.6
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcc--------cCCCCCchhHHHc-c-
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQI--------RGGGELGRQWYEN-G- 314 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------rG~~~~g~~~~~~-~- 314 (505)
.+++.|++|.+. .++.|+||.+||+.. ...+||+|+.+|+ ||+.++|. |.+. +
T Consensus 91 ~~~~~i~lP~~~---~~p~Pvii~i~~~~~-------------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~~ 153 (375)
T 3pic_A 91 SFTVTITYPSSG---TAPYPAIIGYGGGSL-------------PAPAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYGS 153 (375)
T ss_dssp EEEEEEECCSSS---CSSEEEEEEETTCSS-------------CCCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEECCCCC---CCCccEEEEECCCcc-------------ccCCCeEEEEecccccccccCCCCcccee-cccccCC
Confidence 577888888764 377899999998521 1357999999997 66667776 4322 1
Q ss_pred cccCCcch--HHHHHHHHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---------
Q 010654 315 KFLKKKNT--FTDFIACAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------- 381 (505)
Q Consensus 315 ~~~~~~~~--~~D~~~~~~~l~~~~--~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--------- 381 (505)
...++... .-|+..+++||.+++ .||++||+|+|+|+||..++++++.. ++++++|+.++..+-..
T Consensus 154 ~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G~~~~R~~~~~~ 232 (375)
T 3pic_A 154 SHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGGSACWRISDYLK 232 (375)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTTTSCHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCchhhhhhhhhhc
Confidence 12333322 258999999999998 99999999999999999999999985 59999999876443211
Q ss_pred hccCCCC---------CCCcccccccCC-----CCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHH
Q 010654 382 TMLDPTI---------PLTTAEWEEWGD-----PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFV 447 (505)
Q Consensus 382 ~~~~~~~---------~~~~~~~~~~g~-----~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~ 447 (505)
...+... .+....+..|.. |-|... .+... + .. |+|++.| +|..+++......+
T Consensus 233 ~~Ge~v~~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~--L~ALi-----A---PR-Pllv~~g-~D~w~~~~g~~~~~ 300 (375)
T 3pic_A 233 SQGANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDHHS--LAALI-----A---PR-GLFVIDN-NIDWLGPQSCFGCM 300 (375)
T ss_dssp HTTCCCCCHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHH--HHHTS-----T---TS-EEEEECC-CCGGGCHHHHHHHH
T ss_pred ccCccccccccccCcccccccchhhhcccccccCcCHHH--HHHHh-----C---Cc-eEEEecC-CCcccCcHHHHHHH
Confidence 1111100 000111112211 111111 11111 1 23 6999999 99999988766555
Q ss_pred HHH----HhcCCCCCeEEEEecCCCCCC-CCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 448 AKL----REMKTDDNILLFKCELGAGHF-SKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 448 ~~L----~~~~~~~~~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
.++ +..|++-++-.. ...+++|. +... .+ ..+++||+++|....
T Consensus 301 ~~a~~VY~~lG~~d~~~~~-~~ggH~Hc~fp~~--~~----~~~~~F~~k~L~~~~ 349 (375)
T 3pic_A 301 TAAHMAWQALGVSDHMGYS-QIGAHAHCAFPSN--QQ----SQLTAFVQKFLLGQS 349 (375)
T ss_dssp HHHHHHHHHTTCGGGEEEE-CCSCCSTTCCCGG--GH----HHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHcCCccceEEE-eeCCCccccCCHH--HH----HHHHHHHHHHhCCCC
Confidence 554 446766555543 22255663 3321 11 247899999996643
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.4e-14 Score=135.04 Aligned_cols=124 Identities=21% Similarity=0.182 Sum_probs=82.6
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
+...+.+.+|.++++...-++ .+.|.||++||.++.. ..|......|++ ||.|+.+|+||+|.+...-..
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~------~~~~~vvllHG~~~~~--~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~- 75 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGD------ISRPPVLCLPGLTRNA--RDFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDP- 75 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBC------TTSCCEEEECCTTCCG--GGGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSG-
T ss_pred ccCeeecCCCceEEEEEcCCC------CCCCcEEEECCCCcch--hhHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCc-
Confidence 345567789988876533211 1247799999987543 235555566655 999999999999876431000
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
....-....+|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|...
T Consensus 76 -~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 76 -MTYQPMQYLQDLEALLAQE---G---IERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp -GGCSHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred -cccCHHHHHHHHHHHHHhc---C---CCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 0001112234555554443 2 2579999999999999999999999999998753
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.7e-15 Score=141.28 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
..||.++..... ++.|+||++||+++... .|......|+++ |.|+.+|+||.|..... ..
T Consensus 16 ~~~g~~l~~~~~---------g~~~~vv~lHG~~~~~~--~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~--------~~ 75 (301)
T 3kda_A 16 EVDGVKLHYVKG---------GQGPLVMLVHGFGQTWY--EWHQLMPELAKR-FTVIAPDLPGLGQSEPP--------KT 75 (301)
T ss_dssp EETTEEEEEEEE---------ESSSEEEEECCTTCCGG--GGTTTHHHHTTT-SEEEEECCTTSTTCCCC--------SS
T ss_pred eeCCeEEEEEEc---------CCCCEEEEECCCCcchh--HHHHHHHHHHhc-CeEEEEcCCCCCCCCCC--------CC
Confidence 348888865421 13579999999876543 355666778887 99999999999876432 12
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
...++++.+.+..+++.- +.++ +.++|||+||.+++.++.++|++++++|..+|.
T Consensus 76 ~~~~~~~~~~l~~~l~~l--~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 76 GYSGEQVAVYLHKLARQF--SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp CSSHHHHHHHHHHHHHHH--CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred CccHHHHHHHHHHHHHHc--CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 234455554444444331 2356 999999999999999999999999999988875
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.8e-15 Score=140.04 Aligned_cols=225 Identities=11% Similarity=0.028 Sum_probs=130.9
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
..+|.++..... ++.|+||++||.++.... |......|++ +|.|+.+|+||.|...... .....
T Consensus 14 ~~~g~~l~~~~~---------g~~~~vv~lHG~~~~~~~--~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~----~~~~~ 77 (297)
T 2qvb_A 14 EIAGKRMAYIDE---------GKGDAIVFQHGNPTSSYL--WRNIMPHLEG-LGRLVACDLIGMGASDKLS----PSGPD 77 (297)
T ss_dssp EETTEEEEEEEE---------SSSSEEEEECCTTCCGGG--GTTTGGGGTT-SSEEEEECCTTSTTSCCCS----SCSTT
T ss_pred EECCEEEEEEec---------CCCCeEEEECCCCchHHH--HHHHHHHHhh-cCeEEEEcCCCCCCCCCCC----Ccccc
Confidence 347877754321 224899999998765432 4444455555 5999999999988754320 00011
Q ss_pred cchHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-------------hccC
Q 010654 320 KNTFTDFIACAEYLIKNCYCTK-EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-------------TMLD 385 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~-~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-------------~~~~ 385 (505)
...++++.+.+..+++. .+. +++.++|||+||.+++.++.++|++++++|+.+|...... .+..
T Consensus 78 ~~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
T 2qvb_A 78 RYSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRS 155 (297)
T ss_dssp SSCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTS
T ss_pred CcCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhc
Confidence 13445555555444443 233 6899999999999999999999999999998887553100 0000
Q ss_pred CC---------------------CCCCccc---c-cccCCC-C-CHHHHHHHHhC--------------ChhhcccCCCC
Q 010654 386 PT---------------------IPLTTAE---W-EEWGDP-W-KEEFYFYMKSY--------------SPVDNVKAQNY 424 (505)
Q Consensus 386 ~~---------------------~~~~~~~---~-~~~g~~-~-~~~~~~~~~~~--------------sp~~~~~~~~~ 424 (505)
.. ....... + ..+..+ . ......++... +....+.++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 235 (297)
T 2qvb_A 156 PQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 235 (297)
T ss_dssp TTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred ccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccc
Confidence 00 0000000 0 000000 0 01111122221 12334556788
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
| +|+++|++|..+|+..++++.+.+. . +++++ . +||......++.+. ..+.+||.+..
T Consensus 236 P-~lii~G~~D~~~~~~~~~~~~~~~~----~-~~~~~-~---~gH~~~~~~p~~~~--~~i~~fl~~~~ 293 (297)
T 2qvb_A 236 P-KLFINAEPGAIITGRIRDYVRSWPN----Q-TEITV-P---GVHFVQEDSPEEIG--AAIAQFVRRLR 293 (297)
T ss_dssp C-EEEEEEEECSSSCHHHHHHHHTSSS----E-EEEEE-E---ESSCGGGTCHHHHH--HHHHHHHHHHH
T ss_pred c-EEEEecCCCCcCCHHHHHHHHHHcC----C-eEEEe-c---CccchhhhCHHHHH--HHHHHHHHHHh
Confidence 8 9999999999999877777765543 2 55566 3 58976544444433 35788998764
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.2e-15 Score=137.56 Aligned_cols=210 Identities=14% Similarity=0.084 Sum_probs=122.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 339 (505)
+..|.||++||.+++. ..|......|+++||.|+.+|.||+|.+..... ....++++.+.+..+++. +.
T Consensus 8 ~~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~~- 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGA--WIWYKLKPLLESAGHKVTAVDLSAAGINPRRLD-------EIHTFRDYSEPLMEVMASIPP- 77 (264)
T ss_dssp -CCCEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHHSCT-
T ss_pred CCCCeEEEECCCcccc--chHHHHHHHHHhCCCEEEEeecCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhCC-
Confidence 3468899999987543 236666778888999999999999987643110 112344444444443333 21
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch-h-------hhhhc---cCC--CCCCCc--------------
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-D-------VLTTM---LDP--TIPLTT-------------- 392 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d-------~~~~~---~~~--~~~~~~-------------- 392 (505)
.+++.++||||||.+++.++.++|++++++|..++.. . ....+ ... ......
T Consensus 78 -~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 2wfl_A 78 -DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMI 156 (264)
T ss_dssp -TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEE
T ss_pred -CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhh
Confidence 2689999999999999999999999999998776531 0 00000 000 000000
Q ss_pred --ccc-cc-cCCCCCHHHHHHHH-hCChh----------hcc--c-CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC
Q 010654 393 --AEW-EE-WGDPWKEEFYFYMK-SYSPV----------DNV--K-AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK 454 (505)
Q Consensus 393 --~~~-~~-~g~~~~~~~~~~~~-~~sp~----------~~~--~-~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~ 454 (505)
..+ .. +......+...... ...|. ... . ..++| +|+++|++|..+|+..++++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~p--- 232 (264)
T 2wfl_A 157 LGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVK-RAYIFCNEDKSFPVEFQKWFVESVG--- 232 (264)
T ss_dssp CCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSC-EEEEEETTCSSSCHHHHHHHHHHHC---
T ss_pred hhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCC-eEEEEeCCcCCCCHHHHHHHHHhCC---
Confidence 000 00 00000111111110 00110 001 1 12577 9999999999999988888877764
Q ss_pred CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 455 TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 455 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
..++++++ ++||....+.++.+.. .+.+|+.
T Consensus 233 -~~~~~~i~---~~gH~~~~e~P~~~~~--~l~~f~~ 263 (264)
T 2wfl_A 233 -ADKVKEIK---EADHMGMLSQPREVCK--CLLDISD 263 (264)
T ss_dssp -CSEEEEET---TCCSCHHHHSHHHHHH--HHHHHHC
T ss_pred -CceEEEeC---CCCCchhhcCHHHHHH--HHHHHhh
Confidence 34678887 8999764444444333 4566653
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=7e-15 Score=143.60 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=83.9
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
..+|.++++...-|++ .+.|+||++||.++... .|......|+++||.|+.+|+||.|...... ...
T Consensus 9 ~~~g~~l~y~~~G~~~-----~~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~------~~~ 75 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPD-----QQGPLVVLLHGFPESWY--SWRHQIPALAGAGYRVVAIDQRGYGRSSKYR------VQK 75 (356)
T ss_dssp EETTEEEEEEEECCTT-----CCSCEEEEECCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCCCC------SGG
T ss_pred ccCCeEEEEEEecCCC-----CCCCEEEEECCCCCcHH--HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC------ccc
Confidence 3478888765432221 24689999999876543 3555667888899999999999988653211 001
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
...+.++.+.+..+++. ++.+++.++|+|+||.+++.++.++|++++++|+.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 130 (356)
T 2e3j_A 76 AYRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVP 130 (356)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred ccCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCc
Confidence 12334444444333332 24478999999999999999999999999999987654
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.4e-15 Score=150.45 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=85.8
Q ss_pred EEEECCCCceeeEEEEEeCCccCC-CCCCcEEEEEcCCCCcCCCCC-CchhHH---HHHHCCcEEEEEcccCC--CCCch
Q 010654 236 KWASASDGTQIPICIVYRKNLVKL-DGSDPLLLYGYGSYEICNDPA-FNSSRL---SLLDRGFIFAIAQIRGG--GELGR 308 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~-~~~~P~iv~~hGg~~~~~~~~-~~~~~~---~l~~~G~~v~~~d~rG~--~~~g~ 308 (505)
-.+...+|..+.+.-++-...... ..+.|+||++||.+++..... |..... .|+++||.|+.+|+||+ |..+.
T Consensus 81 ~~~~~~~g~~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~ 160 (444)
T 2vat_A 81 SLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGP 160 (444)
T ss_dssp EEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSST
T ss_pred CCeecCCCCEecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCC
Confidence 345566776665533222211011 123589999999877654311 333322 46678999999999994 44322
Q ss_pred hHHHc--cc-----ccCCcchHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 309 QWYEN--GK-----FLKKKNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 309 ~~~~~--~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
.-... +. .......++|+.+.+..+++.- ..++ +.++|||+||.+++.++.++|++++++|+.++..
T Consensus 161 ~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~ 235 (444)
T 2vat_A 161 CSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 235 (444)
T ss_dssp TSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCS
T ss_pred CCCCcccccccccccccccccHHHHHHHHHHHHHhc--CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccc
Confidence 10000 00 0001235666666665555442 2357 8999999999999999999999999999887754
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7.6e-15 Score=136.15 Aligned_cols=207 Identities=16% Similarity=0.197 Sum_probs=119.2
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|.||++||.+++.. .|......|+++ |.|+.+|+||+|.+...- ........+|+.+.++.+ + .
T Consensus 15 ~~~~vvllHG~~~~~~--~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-----~~~~~~~a~dl~~~l~~l---~---~ 80 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLD--NLGVLARDLVND-HNIIQVDVRNHGLSPREP-----VMNYPAMAQDLVDTLDAL---Q---I 80 (255)
T ss_dssp CCCCEEEECCTTCCTT--TTHHHHHHHTTT-SCEEEECCTTSTTSCCCS-----CCCHHHHHHHHHHHHHHH---T---C
T ss_pred CCCCEEEEcCCcccHh--HHHHHHHHHHhh-CcEEEecCCCCCCCCCCC-----CcCHHHHHHHHHHHHHHc---C---C
Confidence 3578999999876543 366666677665 999999999998764310 000012234444444433 2 3
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecC--Cchh----h---hhhc---cCCCCCCCcccccc-cCC-CCCHHHH
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV--PFVD----V---LTTM---LDPTIPLTTAEWEE-WGD-PWKEEFY 407 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d----~---~~~~---~~~~~~~~~~~~~~-~g~-~~~~~~~ 407 (505)
+++.++|||+||.+++.++.++|++++++|... |... + ...+ ...... ....... +.. ..++...
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 159 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQ-TRQQAAAIMRQHLNEEGVI 159 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCC-SHHHHHHHHTTTCCCHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccc-cHHHHHHHHhhhcchhHHH
Confidence 689999999999999999999999999988753 2110 0 0000 000000 0000000 000 0011100
Q ss_pred HHHHh--------------------CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 408 FYMKS--------------------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 408 ~~~~~--------------------~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
.++.. ......+.++++| +|+++|++|..+|+..+.++.+.+. ..++++++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~---~ 231 (255)
T 3bf7_A 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHP-ALFIPGGNSPYVSEQYRDDLLAQFP----QARAHVIA---G 231 (255)
T ss_dssp HHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSC-EEEECBTTCSTTCGGGHHHHHHHCT----TEEECCBT---T
T ss_pred HHHHHhccCCceeecHHHHHhhhhhccccccccccCCC-eEEEECCCCCCCCHHHHHHHHHHCC----CCeEEEeC---C
Confidence 01000 0000124567888 9999999999999988877766553 34566676 8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+||....+.++.+ ...+.+|+.+|
T Consensus 232 ~gH~~~~e~p~~~--~~~i~~fl~~~ 255 (255)
T 3bf7_A 232 AGHWVHAEKPDAV--LRAIRRYLNDH 255 (255)
T ss_dssp CCSCHHHHCHHHH--HHHHHHHHHTC
T ss_pred CCCccccCCHHHH--HHHHHHHHhcC
Confidence 8997643334333 23577888653
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=135.81 Aligned_cols=213 Identities=15% Similarity=0.114 Sum_probs=126.3
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++. ..|......|+++||.|+.+|.||+|.+.... .....++++.+.+..+++.-. ..+
T Consensus 4 ~~~vvllHG~~~~~--~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l~-~~~ 73 (273)
T 1xkl_A 4 GKHFVLVHGACHGG--WSWYKLKPLLEAAGHKVTALDLAASGTDLRKI-------EELRTLYDYTLPLMELMESLS-ADE 73 (273)
T ss_dssp CCEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG-------GGCCSHHHHHHHHHHHHHTSC-SSS
T ss_pred CCeEEEECCCCCCc--chHHHHHHHHHhCCCEEEEecCCCCCCCccCc-------ccccCHHHHHHHHHHHHHHhc-cCC
Confidence 47899999987543 23666677888899999999999998764311 011345555555554444321 126
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh--------hhhhccC--CCCCCCc-------------------c
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD--------VLTTMLD--PTIPLTT-------------------A 393 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d--------~~~~~~~--~~~~~~~-------------------~ 393 (505)
++.++||||||.+++.++.++|++++++|..++... ....+.. ....+.. .
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 153 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCH
Confidence 899999999999999999999999999997765310 0000000 0000000 0
Q ss_pred cc-cc-cCCCCCHHHHHHHH-hCCh-------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 394 EW-EE-WGDPWKEEFYFYMK-SYSP-------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 394 ~~-~~-~g~~~~~~~~~~~~-~~sp-------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
.+ .. +......+...... ...| +......++| +|+++|++|..+|+..++++++.+. ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~p~~~~~~~~~~~p----~~ 228 (273)
T 1xkl_A 154 KFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVK-RVYIVCTEDKGIPEEFQRWQIDNIG----VT 228 (273)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSC-EEEEEETTCTTTTHHHHHHHHHHHC----CS
T ss_pred HHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCC-eEEEEeCCccCCCHHHHHHHHHhCC----CC
Confidence 00 00 00000111111100 0011 0000113577 9999999999999988888877764 34
Q ss_pred CeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 458 NILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++++++ ++||....+.++.+.. .+.+|+.+..+
T Consensus 229 ~~~~i~---~aGH~~~~e~P~~~~~--~i~~fl~~~~~ 261 (273)
T 1xkl_A 229 EAIEIK---GADHMAMLCEPQKLCA--SLLEIAHKYNM 261 (273)
T ss_dssp EEEEET---TCCSCHHHHSHHHHHH--HHHHHHHHCC-
T ss_pred eEEEeC---CCCCCchhcCHHHHHH--HHHHHHHHhcc
Confidence 677887 8999765444444333 57889887543
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-13 Score=130.35 Aligned_cols=218 Identities=11% Similarity=-0.011 Sum_probs=133.5
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcc--------cCCCCCchhHHHccc-
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQI--------RGGGELGRQWYENGK- 315 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------rG~~~~g~~~~~~~~- 315 (505)
.+.+.+++|.+. ++.|+||.+||+.. ...+||+++.+|+ +|+.++|. |.....
T Consensus 124 sf~~~i~lP~g~----~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~ 185 (433)
T 4g4g_A 124 SFSASIRKPSGA----GPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGR 185 (433)
T ss_dssp EEEEEEECCSSS----CCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEECCCCC----CCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccccCC
Confidence 467888888653 77899999987421 1457999999997 55667776 443211
Q ss_pred -ccCCcch--HHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-------
Q 010654 316 -FLKKKNT--FTDFIACAEYLIK----NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT------- 381 (505)
Q Consensus 316 -~~~~~~~--~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~------- 381 (505)
..++... .-++..+++||.. +..||++||+|+|+|+||..++++++.. ++++++|+.++..+-..
T Consensus 186 ~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~~~~R~~~~ 264 (433)
T 4g4g_A 186 DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGAACWRISDQ 264 (433)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTTSCHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCchhhhhhchh
Confidence 2333322 2588999999999 8899999999999999999999999985 59999999887543211
Q ss_pred --hccCCCC---------CCCcccccccCC-----CCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 382 --TMLDPTI---------PLTTAEWEEWGD-----PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 382 --~~~~~~~---------~~~~~~~~~~g~-----~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
...+... .+....+..|.. |.|......+ -+. . |+|++.| +|..+++.....
T Consensus 265 ~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~AL-------iAP---R-PlLv~~g-~D~w~~p~g~~~ 332 (433)
T 4g4g_A 265 QKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAAL-------IVP---R-GLAVFEN-NIDWLGPVSTTG 332 (433)
T ss_dssp HHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHH-------HTT---S-EEEEEEC-CCTTTCHHHHHH
T ss_pred hcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHh-------hCC---c-eEEEecC-CCCcCCcHHHHH
Confidence 1111100 000011111211 1011110011 122 2 5999999 999888876665
Q ss_pred HHHHH----HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 446 FVAKL----REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 446 ~~~~L----~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
.+.++ +..|++-++-..- ..+++|..... +. ...+++||+++|+....
T Consensus 333 a~~aa~~VY~~lGa~d~l~~~~-~ggH~Hc~fp~--~~---r~~~~~F~~k~Lkg~~~ 384 (433)
T 4g4g_A 333 CMAAGRLIYKAYGVPNNMGFSL-VGGHNHCQFPS--SQ---NQDLNSYINYFLLGQGS 384 (433)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEE-CCSSCTTCCCG--GG---HHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHcCCccceEEEe-eCCCCcccCCH--HH---HHHHHHHHHHHhCCCCC
Confidence 54444 3456665544432 22556642211 11 12478899999976543
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=138.21 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=79.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
+..|.||++||..+... .|......|+++ ||.|+.+|+||+|...... ...++|+.+.+..+.+..
T Consensus 34 ~~~~~vvllHG~~~~~~--~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~---------~~~~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSY--SFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---------WEQVQGFREAVVPIMAKA- 101 (302)
T ss_dssp -CCCCEEEECCTTCCGG--GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---------HHHHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEECCCCCChh--HHHHHHHHHHhcCCCcEEEEeccCCCccchhhH---------HHHHHHHHHHHHHHhhcC-
Confidence 45688999999766533 366777889988 9999999999987543211 135677777777776654
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCC-ceeEEEecCCch
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPFV 377 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~ 377 (505)
.+++.++|||+||.+++.++.++|+ +++++|..++..
T Consensus 102 --~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 102 --PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp --TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred --CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 3789999999999999999999999 799999887643
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=137.74 Aligned_cols=227 Identities=8% Similarity=-0.006 Sum_probs=132.2
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
..||.++..... ++.|+||++||.++... .|......|+++ |.|+.+|+||.|...... .....
T Consensus 15 ~~~g~~l~~~~~---------g~~~~vv~lHG~~~~~~--~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~----~~~~~ 78 (302)
T 1mj5_A 15 EIKGRRMAYIDE---------GTGDPILFQHGNPTSSY--LWRNIMPHCAGL-GRLIACDLIGMGDSDKLD----PSGPE 78 (302)
T ss_dssp EETTEEEEEEEE---------SCSSEEEEECCTTCCGG--GGTTTGGGGTTS-SEEEEECCTTSTTSCCCS----SCSTT
T ss_pred EECCEEEEEEEc---------CCCCEEEEECCCCCchh--hhHHHHHHhccC-CeEEEEcCCCCCCCCCCC----CCCcc
Confidence 347877754321 22589999999876543 244444556555 899999999988754320 00111
Q ss_pred cchHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh---hh----------hccC
Q 010654 320 KNTFTDFIACAEYLIKNCYCTK-EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV---LT----------TMLD 385 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~-~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~---~~----------~~~~ 385 (505)
...++++.+.+..+++.- +. +++.++|+|+||.+++.++.++|++++++|+.+|.... .. .+..
T Consensus 79 ~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (302)
T 1mj5_A 79 RYAYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRS 156 (302)
T ss_dssp SSCHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHHh--CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhc
Confidence 134556555555555442 33 68999999999999999999999999999988775421 00 0000
Q ss_pred CC-------CCCCcccc-cc-cCCCCCHHH------------------HHHHHhC--------------ChhhcccCCCC
Q 010654 386 PT-------IPLTTAEW-EE-WGDPWKEEF------------------YFYMKSY--------------SPVDNVKAQNY 424 (505)
Q Consensus 386 ~~-------~~~~~~~~-~~-~g~~~~~~~------------------~~~~~~~--------------sp~~~~~~~~~ 424 (505)
.. .......+ .. ......++. ..++... +....+.++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 236 (302)
T 1mj5_A 157 QAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236 (302)
T ss_dssp TTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCS
T ss_pred cchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCC
Confidence 00 00000000 00 000011111 1111111 11234567788
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
| +|+++|++|..+|+..++++++.+. . +++++ . +||......++.+. ..+.+|+.+..+.
T Consensus 237 P-~l~i~g~~D~~~~~~~~~~~~~~~~----~-~~~~~-~---~gH~~~~e~p~~~~--~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 237 P-KLFINAEPGALTTGRMRDFCRTWPN----Q-TEITV-A---GAHFIQEDSPDEIG--AAIAAFVRRLRPA 296 (302)
T ss_dssp C-EEEEEEEECSSSSHHHHHHHTTCSS----E-EEEEE-E---ESSCGGGTCHHHHH--HHHHHHHHHHSCC
T ss_pred C-eEEEEeCCCCCCChHHHHHHHHhcC----C-ceEEe-c---CcCcccccCHHHHH--HHHHHHHHhhccc
Confidence 8 9999999999999877766655443 2 55566 3 58976544454433 3578899887643
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.2e-14 Score=137.64 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=73.2
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.+++.. .|......|++ +|.|+.+|.||.|.+... .....++++.+.+..+++.-. .++
T Consensus 30 ~pvvllHG~~~~~~--~w~~~~~~L~~-~~~via~Dl~G~G~S~~~--------~~~~~~~~~a~dl~~ll~~l~--~~~ 96 (316)
T 3afi_E 30 PVVLFLHGNPTSSH--IWRNILPLVSP-VAHCIAPDLIGFGQSGKP--------DIAYRFFDHVRYLDAFIEQRG--VTS 96 (316)
T ss_dssp CEEEEECCTTCCGG--GGTTTHHHHTT-TSEEEEECCTTSTTSCCC--------SSCCCHHHHHHHHHHHHHHTT--CCS
T ss_pred CeEEEECCCCCchH--HHHHHHHHHhh-CCEEEEECCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHcC--CCC
Confidence 58999999876543 35555666765 499999999999876431 112345666555555554422 368
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
+.|+|+|+||.+++.++.++|++++++|...+
T Consensus 97 ~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 97 AYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp EEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred EEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 99999999999999999999999999987764
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.7e-15 Score=137.49 Aligned_cols=209 Identities=14% Similarity=0.101 Sum_probs=120.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
.+.|+||++||+.+. ...|......|++ +|.|+.+|+||.|.... ......++++.+.+..+++.- +
T Consensus 18 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~~~~l~~~--~ 84 (267)
T 3fla_A 18 DARARLVCLPHAGGS--ASFFFPLAKALAP-AVEVLAVQYPGRQDRRH--------EPPVDSIGGLTNRLLEVLRPF--G 84 (267)
T ss_dssp TCSEEEEEECCTTCC--GGGGHHHHHHHTT-TEEEEEECCTTSGGGTT--------SCCCCSHHHHHHHHHHHTGGG--T
T ss_pred CCCceEEEeCCCCCC--chhHHHHHHHhcc-CcEEEEecCCCCCCCCC--------CCCCcCHHHHHHHHHHHHHhc--C
Confidence 567999999998654 2335555556654 59999999998875422 111234555555555444432 4
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCc----eeEEEecCCchhhhhhccCCCCCCCcccc----cccC-CC----CCHHH-
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDL----FKAAVAAVPFVDVLTTMLDPTIPLTTAEW----EEWG-DP----WKEEF- 406 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~----~~a~v~~~~~~d~~~~~~~~~~~~~~~~~----~~~g-~~----~~~~~- 406 (505)
.+++.++|||+||.+++.++.++|++ +++++...+........ ..........+ ..++ .+ .+++.
T Consensus 85 ~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
T 3fla_A 85 DRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRD-DDVRGASDERLVAELRKLGGSDAAMLADPELL 163 (267)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCC-SCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHH
T ss_pred CCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccc-hhhcccchHHHHHHHHHhcCcchhhccCHHHH
Confidence 47899999999999999999999986 78888776543211110 00000000000 0000 00 01111
Q ss_pred ----------HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 407 ----------YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 407 ----------~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
+..+..+.+... .++++| +|+++|++|..+|+..+.++.+.+.. ++++++++ + ||......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~---g-gH~~~~~~ 234 (267)
T 3fla_A 164 AMVLPAIRSDYRAVETYRHEPG-RRVDCP-VTVFTGDHDPRVSVGEARAWEEHTTG---PADLRVLP---G-GHFFLVDQ 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTT-CCBSSC-EEEEEETTCTTCCHHHHHGGGGGBSS---CEEEEEES---S-STTHHHHT
T ss_pred HHHHHHHHHHHHhhhccccccc-CcCCCC-EEEEecCCCCCCCHHHHHHHHHhcCC---CceEEEec---C-CceeeccC
Confidence 111112222121 466887 99999999999998777776554432 46777787 7 99753222
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 010654 477 FERLREAAFTYTFLMRAL 494 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l 494 (505)
++. ....+.+||.+..
T Consensus 235 ~~~--~~~~i~~fl~~~~ 250 (267)
T 3fla_A 235 AAP--MIATMTEKLAGPA 250 (267)
T ss_dssp HHH--HHHHHHHHTC---
T ss_pred HHH--HHHHHHHHhcccc
Confidence 222 2334677887654
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-14 Score=125.57 Aligned_cols=169 Identities=13% Similarity=0.026 Sum_probs=115.0
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCc---EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGF---IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~---~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.|+||++||..+.. ..|......|.++|| .|+.+|+||.+.... ...+++.+.+..++++ .
T Consensus 3 ~~~vv~~HG~~~~~--~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGAS--FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCCG--GGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCCH--hHHHHHHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--c
Confidence 47899999987543 346666778999998 599999999876432 2345555555555443 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhh
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~ 417 (505)
+.+++.++|||+||.+++.++.++ |++++++|+.+|....... ... +. ..+
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~---~~~------------~~----------~~~-- 119 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG---KAL------------PG----------TDP-- 119 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---BCC------------CC----------SCT--
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc---ccC------------CC----------CCC--
Confidence 447899999999999999999887 8899999999987653211 000 00 011
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
..+.| +|+++|++|..||+..+. ....++++++ +.||......++ ....+.+||.+.
T Consensus 120 ---~~~~p-~l~i~G~~D~~v~~~~~~---------~~~~~~~~~~---~~gH~~~~~~~~---~~~~i~~fl~~~ 176 (181)
T 1isp_A 120 ---NQKIL-YTSIYSSADMIVMNYLSR---------LDGARNVQIH---GVGHIGLLYSSQ---VNSLIKEGLNGG 176 (181)
T ss_dssp ---TCCCE-EEEEEETTCSSSCHHHHC---------CBTSEEEEES---SCCTGGGGGCHH---HHHHHHHHHTTT
T ss_pred ---ccCCc-EEEEecCCCccccccccc---------CCCCcceeec---cCchHhhccCHH---HHHHHHHHHhcc
Confidence 11355 999999999999986431 2345677887 889975433332 333577888653
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.1e-14 Score=133.29 Aligned_cols=250 Identities=14% Similarity=0.142 Sum_probs=139.8
Q ss_pred ceEEEEEEECC-CCceeeEEEEEeCCccC----CCCCCcEEEEEcCCCCcCCCCCCchhH-HHHHHCCcEEEEEcccCCC
Q 010654 231 YFTERKWASAS-DGTQIPICIVYRKNLVK----LDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGG 304 (505)
Q Consensus 231 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~----~~~~~P~iv~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~ 304 (505)
-...++++.|. -|..+...+++|+++.. +++++|+|.++||..+....+...... +...+.|.+++.++..-.+
T Consensus 12 G~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~ 91 (299)
T 4fol_A 12 GRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRG 91 (299)
T ss_dssp EEEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCS
T ss_pred CEEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcce
Confidence 35566666664 57788899999998621 346799999999986543221111112 3455679999998742110
Q ss_pred -----------CCc--hhHH-Hcccc--cCC----cchHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHH
Q 010654 305 -----------ELG--RQWY-ENGKF--LKK----KNTFTDFIACAEYLIK----NCYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 305 -----------~~g--~~~~-~~~~~--~~~----~~~~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
.+| ..|. ++... ..+ ..-.+++...++.-.. +...+.++.+|+|+||||+-++.++
T Consensus 92 ~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~a 171 (299)
T 4fol_A 92 DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGY 171 (299)
T ss_dssp TTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHH
T ss_pred eecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHH
Confidence 011 0111 00000 000 0122333333332111 2234567899999999999999999
Q ss_pred hhC--CCceeEEEecCCchhhhhhccCCCCCCCcccccc-cCCCCCHHHHHHHHhCChhhcc---cCCCCCeEEEEccCC
Q 010654 361 NMR--PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE-WGDPWKEEFYFYMKSYSPVDNV---KAQNYPHILVTAGLN 434 (505)
Q Consensus 361 ~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~sp~~~~---~~~~~Pp~Li~~G~~ 434 (505)
.++ |+.|.++.+.+|+.+..... .....+.. +|.. ... +...++...+ .+...|+++|-+|+.
T Consensus 172 l~~~~~~~~~~~~s~s~~~~p~~~~------~~~~~~~~~~g~~--~~~---~~~~d~~~l~~~~~~~~~~~i~id~G~~ 240 (299)
T 4fol_A 172 LKGYSGKRYKSCSAFAPIVNPSNVP------WGQKAFKGYLGEE--KAQ---WEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp HHTGGGTCCSEEEEESCCCCGGGSH------HHHHHHHHHTC----------CGGGCHHHHGGGSCCCTTCCEEEEEETT
T ss_pred HhCCCCCceEEEEecccccCccccc------ccccccccccccc--hhh---hhhcCHHHHHHhcccCCCCceEEEecCC
Confidence 875 67899999999987643211 00011111 1221 111 1233444333 333445699999999
Q ss_pred CCCCCCC-hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 435 DPRVMYS-EPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 435 D~~vp~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|...... ..+.|.++++++|.+..+. |...+|.+|... ... ..+.+.+.|..++||+
T Consensus 241 D~f~~~~l~~~~f~~a~~~~g~~~~~~-~r~~~GydHsy~--f~~--~fi~dhl~fha~~Lgl 298 (299)
T 4fol_A 241 DPFLEEHLKPELLLEAVKATSWQDYVE-IKKVHGFDHSYY--FVS--TFVPEHAEFHARNLGL 298 (299)
T ss_dssp CTTHHHHTCTHHHHHHHTTSTTTTCEE-EEEETTCCSSHH--HHH--HHHHHHHHHHHHHTTC
T ss_pred CcchhhhcCHHHHHHHHHhcCCCceEE-EEeCCCCCCCHH--HHH--HHHHHHHHHHHHhcCC
Confidence 9876421 2467999999999886543 333336678521 111 2244568999999985
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-15 Score=154.93 Aligned_cols=217 Identities=17% Similarity=0.109 Sum_probs=135.7
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCC-cEEEEEccc-CCCCCchhHHHcccccCCcch
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRG-FIFAIAQIR-GGGELGRQWYENGKFLKKKNT 322 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G-~~v~~~d~r-G~~~~g~~~~~~~~~~~~~~~ 322 (505)
+...++.|+.. .++.|+||++|||+..... ..+......|+++| ++|+.+||| |..+++..-.. .....+...
T Consensus 83 L~l~v~~P~~~---~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~-~~~~~~n~g 158 (489)
T 1qe3_A 83 LYVNVFAPDTP---SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSF-DEAYSDNLG 158 (489)
T ss_dssp CEEEEEEECSS---CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTT-CTTSCSCHH
T ss_pred CEEEEEeCCCC---CCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccc-cccCCCCcc
Confidence 55566778653 2348999999998743222 11222346777775 999999999 33344321000 011234467
Q ss_pred HHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCchhhhhhccCCCCCCCcccc-c
Q 010654 323 FTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW-E 396 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~ 396 (505)
+.|+.++++|+.++. .+|++||+|+|+|+||++++.++... +++|+++|+.+|..++..... .... ...+ .
T Consensus 159 l~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~--~~~~-~~~~~~ 235 (489)
T 1qe3_A 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQ--AAST-AAAFLQ 235 (489)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHH--HHHH-HHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHH--HHHH-HHHHHH
Confidence 899999999998762 36999999999999999998888753 468999999999764321100 0000 0000 1
Q ss_pred ccCCCC-CHH------HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 397 EWGDPW-KEE------FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 397 ~~g~~~-~~~------~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
..|.+. ..+ ..+.+...+++.+......| .+++++..|..+.+.+..+++++++.+++++.+-.++ ++|
T Consensus 236 ~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~---~Eg 311 (489)
T 1qe3_A 236 VLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIF-QLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTR---DEG 311 (489)
T ss_dssp HHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTT-SCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEET---TGG
T ss_pred HcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccC-CccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeec---chh
Confidence 122221 100 00112222333222223344 7889999999999999999999988888887666666 668
Q ss_pred CCCC
Q 010654 470 HFSK 473 (505)
Q Consensus 470 H~~~ 473 (505)
|.+.
T Consensus 312 ~~~~ 315 (489)
T 1qe3_A 312 YLFF 315 (489)
T ss_dssp GGTC
T ss_pred Hhhc
Confidence 8654
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=135.15 Aligned_cols=208 Identities=13% Similarity=0.164 Sum_probs=122.1
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|++. |.|+.+|+||+|.+...- . ....++++.+.+..+++. ...+
T Consensus 16 g~~vvllHG~~~~~~--~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~------~-~~~~~~~~~~dl~~~l~~--l~~~ 83 (269)
T 2xmz_A 16 NQVLVFLHGFLSDSR--TYHNHIEKFTDN-YHVITIDLPGHGEDQSSM------D-ETWNFDYITTLLDRILDK--YKDK 83 (269)
T ss_dssp SEEEEEECCTTCCGG--GGTTTHHHHHTT-SEEEEECCTTSTTCCCCT------T-SCCCHHHHHHHHHHHHGG--GTTS
T ss_pred CCeEEEEcCCCCcHH--HHHHHHHHHhhc-CeEEEecCCCCCCCCCCC------C-CccCHHHHHHHHHHHHHH--cCCC
Confidence 356999999876543 355556677664 999999999998764310 1 023455555555555544 2346
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh----------------hccCCCCCCCccccc---ccCC---
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT----------------TMLDPTIPLTTAEWE---EWGD--- 400 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~----------------~~~~~~~~~~~~~~~---~~g~--- 400 (505)
++.++|||+||.+++.++.++|++++++|..++...... .+...........|. .+..
T Consensus 84 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (269)
T 2xmz_A 84 SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLE 163 (269)
T ss_dssp EEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGG
T ss_pred cEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCcccccccc
Confidence 899999999999999999999999999998876432100 000000000000000 0000
Q ss_pred -C-------------CCHHHH-HHHHh------CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 401 -P-------------WKEEFY-FYMKS------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 401 -~-------------~~~~~~-~~~~~------~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
+ ..+..+ ..+.. .+....+.++++| +|+++|++|..+|+... ++++.+ ...++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~-~~~~~~----~~~~~ 237 (269)
T 2xmz_A 164 LPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVP-TLILAGEYDEKFVQIAK-KMANLI----PNSKC 237 (269)
T ss_dssp SCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSC-EEEEEETTCHHHHHHHH-HHHHHS----TTEEE
T ss_pred CCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCC-EEEEEeCCCcccCHHHH-HHHhhC----CCcEE
Confidence 0 001100 01110 1112346677898 99999999999887653 344433 34567
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++++ ++||....+.++.+ ...+.+||.+.
T Consensus 238 ~~i~---~~gH~~~~e~p~~~--~~~i~~fl~~~ 266 (269)
T 2xmz_A 238 KLIS---ATGHTIHVEDSDEF--DTMILGFLKEE 266 (269)
T ss_dssp EEET---TCCSCHHHHSHHHH--HHHHHHHHHHH
T ss_pred EEeC---CCCCChhhcCHHHH--HHHHHHHHHHh
Confidence 7887 88997643334333 23578888753
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.55 E-value=2.5e-14 Score=132.91 Aligned_cols=210 Identities=13% Similarity=0.033 Sum_probs=123.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+.+. ..|......|+++||.|+.+|.||+|.+.... .....++++.+.+..+++.-. ..+
T Consensus 3 ~~~vvllHG~~~~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l~-~~~ 72 (257)
T 3c6x_A 3 FAHFVLIHTICHGA--WIWHKLKPLLEALGHKVTALDLAASGVDPRQI-------EEIGSFDEYSEPLLTFLEALP-PGE 72 (257)
T ss_dssp CCEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHTHHHHHHHHTSC-TTC
T ss_pred CCcEEEEcCCccCc--CCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc-------ccccCHHHHHHHHHHHHHhcc-ccC
Confidence 36799999986443 34666778888999999999999998764311 011345555555554444321 125
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch--------hhhhhcc---CCCCCCCc----------------ccc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV--------DVLTTML---DPTIPLTT----------------AEW 395 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~--------d~~~~~~---~~~~~~~~----------------~~~ 395 (505)
++.++||||||.+++.++.++|++++++|..++.. .+..... ........ ..+
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTL 152 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred CeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHH
Confidence 89999999999999999999999999998765531 0000000 00000000 000
Q ss_pred -c-ccCCCCCHHHHHHHH-hCChh----------hcc--cC-CCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 396 -E-EWGDPWKEEFYFYMK-SYSPV----------DNV--KA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 396 -~-~~g~~~~~~~~~~~~-~~sp~----------~~~--~~-~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
. .+......+...... ...|. ... .. .++| +|+++|++|..+|+..++++++.+. ..++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~p~~~~~~~~~~~~----~~~~ 227 (257)
T 3c6x_A 153 LRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIK-KIYVWTDQDEIFLPEFQLWQIENYK----PDKV 227 (257)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSC-EEEEECTTCSSSCHHHHHHHHHHSC----CSEE
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCccc-EEEEEeCCCcccCHHHHHHHHHHCC----CCeE
Confidence 0 000000111111110 01110 000 11 2577 9999999999999988888877654 3567
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++++ ++||....+.++.+.. .+.+|+.+
T Consensus 228 ~~i~---~~gH~~~~e~P~~~~~--~l~~f~~~ 255 (257)
T 3c6x_A 228 YKVE---GGDHKLQLTKTKEIAE--ILQEVADT 255 (257)
T ss_dssp EECC---SCCSCHHHHSHHHHHH--HHHHHHHH
T ss_pred EEeC---CCCCCcccCCHHHHHH--HHHHHHHh
Confidence 7887 8899765444544433 46777764
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-14 Score=129.59 Aligned_cols=116 Identities=14% Similarity=0.052 Sum_probs=81.3
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 321 (505)
+|.++..... + ....|+||++||.++... .|......|+ ++|.|+.+|+||.|.+... ....
T Consensus 7 ~g~~l~~~~~---g----~~~~~~vv~lHG~~~~~~--~~~~~~~~L~-~~~~v~~~D~~G~G~S~~~--------~~~~ 68 (264)
T 3ibt_A 7 NGTLMTYSES---G----DPHAPTLFLLSGWCQDHR--LFKNLAPLLA-RDFHVICPDWRGHDAKQTD--------SGDF 68 (264)
T ss_dssp TTEECCEEEE---S----CSSSCEEEEECCTTCCGG--GGTTHHHHHT-TTSEEEEECCTTCSTTCCC--------CSCC
T ss_pred CCeEEEEEEe---C----CCCCCeEEEEcCCCCcHh--HHHHHHHHHH-hcCcEEEEccccCCCCCCC--------cccc
Confidence 6777765422 1 123589999999876543 3555566664 4699999999999875432 1223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCch
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFV 377 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~ 377 (505)
.++++.+.+..+++.- +.+++.++|||+||.+++.++.++ |++++++|..+|..
T Consensus 69 ~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 69 DSQTLAQDLLAFIDAK--GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp CHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred CHHHHHHHHHHHHHhc--CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 4455555554444432 335899999999999999999999 99999999987644
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.54 E-value=7.5e-14 Score=130.11 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=71.5
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||..+... .|......|+++||.|+.+|+||+|.+.... ...++++.+.+..+++.-.+++.
T Consensus 16 ~~~vvllHG~~~~~~--~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~---------~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA--DWQPVLSHLARTQCAALTLDLPGHGTNPERH---------CDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCCGG--GGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCCHH--HHHHHHHHhcccCceEEEecCCCCCCCCCCC---------ccCHHHHHHHHHHHHHHhCcCCC
Confidence 488999999876543 3666667777689999999999998764310 12344555445444444223222
Q ss_pred cEEEEeeChHHHHHHH---HHhhCCCceeEEEecCC
Q 010654 343 KLCIEGRSAGGLLIGA---VLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~---~~~~~p~~~~a~v~~~~ 375 (505)
++.++||||||.+++. ++.++|++++++|..++
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~ 120 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGG 120 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESC
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecC
Confidence 3999999999999999 77889999999988765
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.2e-15 Score=140.41 Aligned_cols=224 Identities=15% Similarity=0.074 Sum_probs=138.8
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCC-CCCCcEEEEEcCCCCcCCCCCCchhHHHHHH------CCcEEEEEcccCC
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKL-DGSDPLLLYGYGSYEICNDPAFNSSRLSLLD------RGFIFAIAQIRGG 303 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~-~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~------~G~~v~~~d~rG~ 303 (505)
..+.+++.|. -|.....+++.|+++ .+ .+++|+|+++||...-. ........+.. .+++|+.++..
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y-~~~~~~yPVlylldG~~~f~---~~~~~~~~l~~~~~~~~~~~IvV~i~~~-- 84 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGY-AQSLEAYPVVYLLDGEDQFD---HMASLLQFLSQGTMPQIPKVIIVGIHNT-- 84 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTG-GGSCCCEEEEEESSHHHHHH---HHHHHHHHHTCSSSCSSCCCEEEEECCS--
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCC-CCCCCCccEEEEecChhhhH---HHHHHHHHHHhhhhcCCCCEEEEEECCC--
Confidence 4456666665 477888999999998 55 67899999999952100 00111233432 26788888751
Q ss_pred CCCchhHHHc-------c------cc-cCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCce
Q 010654 304 GELGRQWYEN-------G------KF-LKKKNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLF 367 (505)
Q Consensus 304 ~~~g~~~~~~-------~------~~-~~~~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~ 367 (505)
....++... + .. ..+...+.+.. ..+.++.++..+++.| +|+|+|+||+++++++.++|++|
T Consensus 85 -~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F 162 (331)
T 3gff_A 85 -NRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLF 162 (331)
T ss_dssp -SHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSC
T ss_pred -CcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhh
Confidence 111111100 0 00 11223344433 4556666665567666 79999999999999999999999
Q ss_pred eEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCC-------CCCC
Q 010654 368 KAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP-------RVMY 440 (505)
Q Consensus 368 ~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~-------~vp~ 440 (505)
+++++.+|.+.|.. . .....+.. .+......+. ++++.||+.|. +++.
T Consensus 163 ~~~~~~S~~~w~~~-------------------~---~~~~~~~~--~~~~~~~~~~-~l~l~~G~~d~~~~~~~~~~~~ 217 (331)
T 3gff_A 163 SAYLALDTSLWFDS-------------------P---HYLTLLEE--RVVKGDFKQK-QLFMAIANNPLSPGFGVSSYHK 217 (331)
T ss_dssp SEEEEESCCTTTTT-------------------T---HHHHHHHH--HHHHCCCSSE-EEEEEECCCSEETTTEECCHHH
T ss_pred heeeEeCchhcCCh-------------------H---HHHHHHHH--HhhcccCCCC-eEEEEeCCCCCCCccchHHHHH
Confidence 99999999653211 0 01111110 1111111234 49999999998 6788
Q ss_pred ChHHHHHHHHHhc---CCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 441 SEPAKFVAKLREM---KTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 441 ~~~~~~~~~L~~~---~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
.++.+++++|++. |+++++..|+ +++|+... ...+...+.||-.....
T Consensus 218 ~~~~~l~~~Lk~~~~~g~~~~~~~~p---g~~H~sv~-----~~~~~~~l~~lf~~~~~ 268 (331)
T 3gff_A 218 DLNLAFADKLTKLAPKGLGFMAKYYP---EETHQSVS-----HIGLYDGIRHLFKDFAI 268 (331)
T ss_dssp HHHHHHHHHHHHHCCTTEEEEEEECT---TCCTTTHH-----HHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHhccCCCceEEEEECC---CCCccccH-----HHHHHHHHHHHHhhcCC
Confidence 8899999999987 6678888887 77896421 22333456677655543
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-13 Score=130.56 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=80.9
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.++++... +..|.||++||.+++.. .|......|+++ |.|+.+|.||+|.+... . ......
T Consensus 16 ~~g~~l~y~~~---------G~g~~lvllHG~~~~~~--~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~---~~~~~~ 79 (294)
T 1ehy_A 16 LPDVKIHYVRE---------GAGPTLLLLHGWPGFWW--EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-D---LNDLSK 79 (294)
T ss_dssp CSSCEEEEEEE---------ECSSEEEEECCSSCCGG--GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-C---TTCGGG
T ss_pred ECCEEEEEEEc---------CCCCEEEEECCCCcchh--hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-c---cccccC
Confidence 47877765421 13478999999876543 466666677665 99999999999876431 0 000002
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
..++++.+.+..+++.-. .+++.++|||+||.+++.++.++|++++++|...+
T Consensus 80 ~~~~~~a~dl~~ll~~l~--~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 132 (294)
T 1ehy_A 80 YSLDKAADDQAALLDALG--IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132 (294)
T ss_dssp GCHHHHHHHHHHHHHHTT--CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHHcC--CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecC
Confidence 345555555555444322 36899999999999999999999999999998775
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.53 E-value=3e-14 Score=132.20 Aligned_cols=202 Identities=16% Similarity=0.130 Sum_probs=118.6
Q ss_pred Cc-EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 263 DP-LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 263 ~P-~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.| .||++||.++... .|......|+ .+|.|+.+|+||+|.+... ....++++ ++.+.+. ++
T Consensus 12 g~~~vvllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~~--l~- 73 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAE--VWRCIDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQQ--AP- 73 (258)
T ss_dssp CSSEEEEECCTTCCGG--GGGGTHHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHHH---HHHHHTT--SC-
T ss_pred CCCeEEEECCCCCChH--HHHHHHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHHH---HHHHHHH--hC-
Confidence 35 8999999765433 3555556665 5899999999999875432 12334443 3344432 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC----------CC------ccccc---ccCCCC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP----------LT------TAEWE---EWGDPW 402 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~----------~~------~~~~~---~~g~~~ 402 (505)
+++.++|||+||.+++.++.++|++++++|...+.........-.... +. ...+. ..+.+.
T Consensus 74 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 1m33_A 74 DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTET 153 (258)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTT
T ss_pred CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcc
Confidence 789999999999999999999999999999865431100000000000 00 00000 001111
Q ss_pred ------------------CHHH----HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 403 ------------------KEEF----YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 403 ------------------~~~~----~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
.... ...+...+....+.++++| +|+++|++|..+|+..++.+.+.+ ...+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~ 228 (258)
T 1m33_A 154 ARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMP-FLRLYGYLDGLVPRKVVPMLDKLW----PHSESY 228 (258)
T ss_dssp HHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSC-EEEEEETTCSSSCGGGCC-CTTTC----TTCEEE
T ss_pred chhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCC-EEEEeecCCCCCCHHHHHHHHHhC----ccceEE
Confidence 1110 0111122223445677898 999999999999987776655433 345777
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+++ ++||....+.++.+ ...+.+|+.+
T Consensus 229 ~i~---~~gH~~~~e~p~~~--~~~i~~fl~~ 255 (258)
T 1m33_A 229 IFA---KAAHAPFISHPAEF--CHLLVALKQR 255 (258)
T ss_dssp EET---TCCSCHHHHSHHHH--HHHHHHHHTT
T ss_pred EeC---CCCCCccccCHHHH--HHHHHHHHHh
Confidence 887 88997543334332 2346778754
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-14 Score=136.37 Aligned_cols=123 Identities=9% Similarity=0.047 Sum_probs=76.9
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-----hHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
+|.++..... + .+....|+||++||.++.... .|.. ....|+ ++|.|+.+|+||.|....... .
T Consensus 19 ~~~~l~y~~~---G--~~~~~~p~vvllHG~~~~~~~-~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~s~~~~~----~ 87 (286)
T 2qmq_A 19 PYGSVTFTVY---G--TPKPKRPAIFTYHDVGLNYKS-CFQPLFRFGDMQEII-QNFVRVHVDAPGMEEGAPVFP----L 87 (286)
T ss_dssp TTEEEEEEEE---S--CCCTTCCEEEEECCTTCCHHH-HHHHHHTSHHHHHHH-TTSCEEEEECTTTSTTCCCCC----T
T ss_pred CCeEEEEEec---c--CCCCCCCeEEEeCCCCCCchh-hhhhhhhhchhHHHh-cCCCEEEecCCCCCCCCCCCC----C
Confidence 5666754422 1 111246899999998764321 0221 334554 479999999999875322110 0
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
......++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+.+|..
T Consensus 88 ~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 88 GYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp TCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 10001344444444433332 123589999999999999999999999999999988744
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-14 Score=137.71 Aligned_cols=151 Identities=13% Similarity=0.041 Sum_probs=98.2
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCCcee-EEEecCCchhhhhhccCCCCCCCcccccc-cCCCCCHHHHHHHHhCC
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK-AAVAAVPFVDVLTTMLDPTIPLTTAEWEE-WGDPWKEEFYFYMKSYS 414 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~-a~v~~~~~~d~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~s 414 (505)
..+|++||+|+|+|+||+|++.++..+|++|+ ++++.++....... ... ....+.. ++.+..++........+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCAR----NQY-YTSCMYNGYPSITTPTANMKSWSGN 80 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTS----SSC-GGGGSTTCCCCCHHHHHHHHHHBTT
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccc----hHH-HHHHhhccCCCCCCHHHHHHHhhcc
Confidence 35899999999999999999999999999998 77666553211100 000 0000000 11111122111111225
Q ss_pred hhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCC--CCCeEEEEecCCCCCCCCCChH---------------
Q 010654 415 PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT--DDNILLFKCELGAGHFSKSGRF--------------- 477 (505)
Q Consensus 415 p~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~--~~~~~~~~~~~~~gH~~~~~~~--------------- 477 (505)
++..+.+++.||+||+||+.|++||+.++++++++|++.+. +++++.++ ++||++.....
T Consensus 81 ~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~---g~gH~~~~~~~~~~~~~c~~~~~pyi 157 (318)
T 2d81_A 81 QIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTT---GAVHTFPTDFNGAGDNSCSLSTSPYI 157 (318)
T ss_dssp TBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEET---TCCSSEEESSCCTTCCCTTSCCTTCE
T ss_pred cCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeC---CCCCCCccCCcccCccccccCCCCcc
Confidence 66656666556799999999999999999999999999883 57777887 88997522111
Q ss_pred --HHHHHHHHHHHHHHHhhC
Q 010654 478 --ERLREAAFTYTFLMRALS 495 (505)
Q Consensus 478 --~~~~~~~~~~~fl~~~l~ 495 (505)
..++....+++||...+.
T Consensus 158 ~~~~~d~~~~i~~ff~g~~~ 177 (318)
T 2d81_A 158 SNCNYDGAGAALKWIYGSLN 177 (318)
T ss_dssp EECSSCHHHHHHHHHHSSCC
T ss_pred cCCCChHHHHHHHHHhccCC
Confidence 024555678999977664
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.7e-14 Score=134.91 Aligned_cols=104 Identities=11% Similarity=0.088 Sum_probs=73.5
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+||++||.........|......|+ +||.|+.+|+||.|.... .......++++.+.+..+++.- ..+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~~--~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPV-------SNQANVGLRDWVNAILMIFEHF--KFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCC-------CCCTTCCHHHHHHHHHHHHHHS--CCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCC-------CCcccccHHHHHHHHHHHHHHh--CCC
Confidence 389999997322111223444444444 699999999999887541 1122245666666666666543 235
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++.++|||+||.+++.++.++|++++++|...|.
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 8999999999999999999999999999998854
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.2e-15 Score=141.64 Aligned_cols=120 Identities=17% Similarity=0.109 Sum_probs=79.6
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc-ccccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN-GKFLKK 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~~ 319 (505)
.||.+++... .++.|+||++||.++... .|......|+ +||.|+.+|+||.|......... ......
T Consensus 12 ~~g~~~~~~~---------~g~~p~vv~lHG~~~~~~--~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~ 79 (304)
T 3b12_A 12 VGDVTINCVV---------GGSGPALLLLHGFPQNLH--MWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSF 79 (304)
Confidence 3676665431 124588999999876543 3555556666 89999999999988754421000 000111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 378 (505)
....+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|..+|...
T Consensus 80 ~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 80 RAMASDQRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 12234444444443 336899999999999999999999999999999887644
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.46 E-value=5e-13 Score=128.22 Aligned_cols=116 Identities=13% Similarity=0.039 Sum_probs=79.7
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.++.... .+ .++.|.||++||.++... .|......|++ .|.|+.+|.||+|.+... ....
T Consensus 28 ~~g~~l~y~~---~G----~g~~~~vvllHG~~~~~~--~w~~~~~~L~~-~~~via~Dl~GhG~S~~~-------~~~~ 90 (318)
T 2psd_A 28 VLDSFINYYD---SE----KHAENAVIFLHGNATSSY--LWRHVVPHIEP-VARCIIPDLIGMGKSGKS-------GNGS 90 (318)
T ss_dssp ETTEEEEEEE---CC----SCTTSEEEEECCTTCCGG--GGTTTGGGTTT-TSEEEEECCTTSTTCCCC-------TTSC
T ss_pred eCCeEEEEEE---cC----CCCCCeEEEECCCCCcHH--HHHHHHHHhhh-cCeEEEEeCCCCCCCCCC-------CCCc
Confidence 4777775431 11 133468999999876543 34444455655 479999999999876431 1112
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
..++++.+.+..+++.-.+ .+++.++|||+||.+++.++.++|++++++|...
T Consensus 91 ~~~~~~a~dl~~ll~~l~~-~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~ 143 (318)
T 2psd_A 91 YRLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHME 143 (318)
T ss_dssp CSHHHHHHHHHHHHTTSCC-CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhheEEEec
Confidence 3466666666666654222 2689999999999999999999999999998854
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.9e-14 Score=134.17 Aligned_cols=221 Identities=13% Similarity=-0.018 Sum_probs=108.6
Q ss_pred eEEEEEEECCCCc-eeeEEEEEeCCcc-----CCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCC
Q 010654 232 FTERKWASASDGT-QIPICIVYRKNLV-----KLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE 305 (505)
Q Consensus 232 ~~~~~~~~s~dG~-~i~~~l~~p~~~~-----~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 305 (505)
..|.+.|++.++. ....|+..+.... ...+..|.||++||..+... .|......|.+ ||.|+.+|+||.|.
T Consensus 14 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~~~--~~~~l~~~L~~-~~~v~~~D~~G~G~ 90 (280)
T 3qmv_A 14 GTENLYFQSNALLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVS--AFRGWQERLGD-EVAVVPVQLPGRGL 90 (280)
T ss_dssp --------------CHHHHSCCCCCCCCCCCCCTTTCSEEEEEECCTTCCGG--GGTTHHHHHCT-TEEEEECCCTTSGG
T ss_pred CcceeeeecchhhhhcchheecCCCCCcccccccCCCCceEEEECCCCCChH--HHHHHHHhcCC-CceEEEEeCCCCCC
Confidence 4566777776663 2223322221110 01122388999999775433 35555667766 99999999999876
Q ss_pred CchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCcee----EEEecCCchhhhh
Q 010654 306 LGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK----AAVAAVPFVDVLT 381 (505)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~----a~v~~~~~~d~~~ 381 (505)
.... .....++++.+.+..+++.-. ..+++.++|||+||.+++.++.++|++.. .++..........
T Consensus 91 S~~~--------~~~~~~~~~a~~~~~~l~~~~-~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~ 161 (280)
T 3qmv_A 91 RLRE--------RPYDTMEPLAEAVADALEEHR-LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLY 161 (280)
T ss_dssp GTTS--------CCCCSHHHHHHHHHHHHHHTT-CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGC
T ss_pred CCCC--------CCCCCHHHHHHHHHHHHHHhC-CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCc
Confidence 4221 122334554444443333211 34689999999999999999998887655 4444332111000
Q ss_pred hccCCCCCCCcccc----ccc-CCCC----C--------H---HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCC
Q 010654 382 TMLDPTIPLTTAEW----EEW-GDPW----K--------E---EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 382 ~~~~~~~~~~~~~~----~~~-g~~~----~--------~---~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~ 441 (505)
.. ..........+ ..+ +.+. + + ..+..+..+.+ ....++++| +|+++|++|..+|+.
T Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P-~l~i~G~~D~~~~~~ 238 (280)
T 3qmv_A 162 GD-RADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDW-HPRPPLDCP-TTAFSAAADPIATPE 238 (280)
T ss_dssp SC-CCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCC-CCCCCBCSC-EEEEEEEECSSSCHH
T ss_pred Cc-ccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhccc-cCCCceecC-eEEEEecCCCCcChH
Confidence 00 00000000000 000 0110 0 0 01111222222 124567888 999999999999987
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
.+.++.+.+ ....++++++ +||....
T Consensus 239 ~~~~~~~~~---~~~~~~~~~~----ggH~~~~ 264 (280)
T 3qmv_A 239 MVEAWRPYT---TGSFLRRHLP----GNHFFLN 264 (280)
T ss_dssp HHHTTGGGB---SSCEEEEEEE----EETTGGG
T ss_pred HHHHHHHhc---CCceEEEEec----CCCeEEc
Confidence 766654433 2234555665 3897543
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=122.57 Aligned_cols=116 Identities=13% Similarity=0.108 Sum_probs=77.7
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.++++. ..+.+ ...|.||++||.+.+.. .|......|+ .+|.|+.+|.||+|.+... ...
T Consensus 11 ~~g~~l~y~-~~~~G-----~~~p~vvllHG~~~~~~--~w~~~~~~L~-~~~rvia~DlrGhG~S~~~--------~~~ 73 (276)
T 2wj6_A 11 VFDNKLSYI-DNQRD-----TDGPAILLLPGWCHDHR--VYKYLIQELD-ADFRVIVPNWRGHGLSPSE--------VPD 73 (276)
T ss_dssp ETTEEEEEE-ECCCC-----CSSCEEEEECCTTCCGG--GGHHHHHHHT-TTSCEEEECCTTCSSSCCC--------CCC
T ss_pred eCCeEEEEE-EecCC-----CCCCeEEEECCCCCcHH--HHHHHHHHHh-cCCEEEEeCCCCCCCCCCC--------CCC
Confidence 477777543 21111 22488999999875433 3665555665 5799999999999876431 112
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVP 375 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~ 375 (505)
..++++.+.+..+++.- +.+++.++|||+||.+++.++.++ |++++++|...+
T Consensus 74 ~~~~~~a~dl~~ll~~l--~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 74 FGYQEQVKDALEILDQL--GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp CCHHHHHHHHHHHHHHH--TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred CCHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 23444444444333321 236899999999999999999999 999999888754
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.2e-13 Score=137.60 Aligned_cols=222 Identities=14% Similarity=0.059 Sum_probs=130.8
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHH-HHCCcEEEEEcccCCC-CCchhHHHcccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSL-LDRGFIFAIAQIRGGG-ELGRQWYENGKF 316 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l-~~~G~~v~~~d~rG~~-~~g~~~~~~~~~ 316 (505)
+.|. +...++.|... ...++.|+||++|||...... ..+....... .++|++|+.+|||.+. ||+..-... ..
T Consensus 82 ~edc--l~l~v~~P~~~-~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~-~~ 157 (522)
T 1ukc_A 82 SEDC--LFINVFKPSTA-TSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVR-QN 157 (522)
T ss_dssp ESCC--CEEEEEEETTC-CTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHH-HS
T ss_pred CCcC--CEEEEEECCCC-CCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhcc-cc
Confidence 3454 44566788764 445678999999998643322 2344322222 2469999999999432 332211110 01
Q ss_pred cCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhC----CCceeEEEecCCchhhhhhccCCCCC
Q 010654 317 LKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMR----PDLFKAAVAAVPFVDVLTTMLDPTIP 389 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~~~~~d~~~~~~~~~~~ 389 (505)
......+.|+.+|++|+.++- ..||+||.|+|+|+||++++.++... ..+|+++|+.+|...... ...
T Consensus 158 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~-----~~~ 232 (522)
T 1ukc_A 158 GDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQR-----TVS 232 (522)
T ss_dssp SCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCC-----CSG
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcC-----CHH
Confidence 123567899999999998762 36999999999999999888777653 568999999998643211 000
Q ss_pred CCccc---c-cccCCCCCHHHHHHHHhCChhhcccC---C-----CCCe--EEEEccCCCCCCCCChHHHHHHHHHhcCC
Q 010654 390 LTTAE---W-EEWGDPWKEEFYFYMKSYSPVDNVKA---Q-----NYPH--ILVTAGLNDPRVMYSEPAKFVAKLREMKT 455 (505)
Q Consensus 390 ~~~~~---~-~~~g~~~~~~~~~~~~~~sp~~~~~~---~-----~~Pp--~Li~~G~~D~~vp~~~~~~~~~~L~~~~~ 455 (505)
..... + ...|.....+..+.++..++...+.. + ..++ ++.++...|..+.+.+..++.++.+..++
T Consensus 233 ~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~v 312 (522)
T 1ukc_A 233 EMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKV 312 (522)
T ss_dssp GGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCCC
Confidence 00000 1 11233221223345555544221111 0 1112 45677888888888998888776655555
Q ss_pred CCCeEEEEecCCCCCCCC
Q 010654 456 DDNILLFKCELGAGHFSK 473 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~ 473 (505)
++ ++--. .++||.+.
T Consensus 313 p~--l~G~~-~~Eg~~f~ 327 (522)
T 1ukc_A 313 PV--LVGDD-TDEGSNFA 327 (522)
T ss_dssp CE--EEEEE-TBGGGGTS
T ss_pred CE--EEEee-cchhHHhh
Confidence 53 33222 26677653
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.9e-12 Score=124.44 Aligned_cols=120 Identities=15% Similarity=0.085 Sum_probs=87.5
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC---------CcEEEEEcccCCCCCchhHH
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR---------GFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~---------G~~v~~~d~rG~~~~g~~~~ 311 (505)
.||.+|+.....+++ +..|.||++||.+++.. .|......|++. ||.|+++|.||.|.+...
T Consensus 75 i~g~~i~~~~~~~~~-----~~~~plll~HG~~~s~~--~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~-- 145 (388)
T 4i19_A 75 IDGATIHFLHVRSPE-----PDATPMVITHGWPGTPV--EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPL-- 145 (388)
T ss_dssp ETTEEEEEEEECCSS-----TTCEEEEEECCTTCCGG--GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCC--
T ss_pred ECCeEEEEEEccCCC-----CCCCeEEEECCCCCCHH--HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCC--
Confidence 489889865443322 34578999999987643 355566677775 999999999998865431
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
......+.++.+.+..+.++- ..+++.++|+|+||.+++.++.++|+++++++..+|.
T Consensus 146 -----~~~~~~~~~~a~~~~~l~~~l--g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 146 -----KSAGWELGRIAMAWSKLMASL--GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp -----SSCCCCHHHHHHHHHHHHHHT--TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred -----CCCCCCHHHHHHHHHHHHHHc--CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 111235666666666665542 2368999999999999999999999999999988753
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.2e-12 Score=115.19 Aligned_cols=214 Identities=16% Similarity=0.065 Sum_probs=129.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCCC---chh--HHHc-----cccc--CC--cchHHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGEL---GRQ--WYEN-----GKFL--KK--KNTFTDF 326 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~---g~~--~~~~-----~~~~--~~--~~~~~D~ 326 (505)
.+.||++||..++.. .|......|.++|| .|+.+|.++.|.. |.. .... .... .. ....+++
T Consensus 6 ~~pvvliHG~~~~~~--~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 6 TTATLFLHGYGGSER--SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CEEEEEECCTTCCGG--GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCcEEEECCCCCChh--HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 467888999765433 46677788999997 5888888766531 110 0000 0001 01 1245677
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCCCcccccccCCC
Q 010654 327 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 401 (505)
Q Consensus 327 ~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 401 (505)
.++++++.++-. .+++.++||||||.+++.++.++|+ +++..|..++..+....+.. +.....+...|.|
T Consensus 84 ~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~---~~~~~~~~~~g~p 158 (249)
T 3fle_A 84 KEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE---NVNEIIVDKQGKP 158 (249)
T ss_dssp HHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS---CTTTSCBCTTCCB
T ss_pred HHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC---CcchhhhcccCCC
Confidence 888888877633 3689999999999999999988764 68888887765553322111 0001111223444
Q ss_pred C-CHHHHHHHHhCChhhcccCCCCCeEEEEccC------CCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 402 W-KEEFYFYMKSYSPVDNVKAQNYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 402 ~-~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~------~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
. ....+..+.+. ...+++.++| ||.|+|+ .|-.||...++.+...++......+.+.+... ++.|...-
T Consensus 159 ~~~~~~~~~l~~~--~~~~p~~~~~-vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~-~a~Hs~l~ 234 (249)
T 3fle_A 159 SRMNAAYRQLLSL--YKIYCGKEIE-VLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGA-KAQHSQLH 234 (249)
T ss_dssp SSCCHHHHHTGGG--HHHHTTTTCE-EEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESG-GGSTGGGG
T ss_pred cccCHHHHHHHHH--HhhCCccCCe-EEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCC-CCchhccc
Confidence 2 12233333222 2334434676 9999998 69999999998887777777666666777622 37796543
Q ss_pred ChHHHHHHHHHHHHHH
Q 010654 475 GRFERLREAAFTYTFL 490 (505)
Q Consensus 475 ~~~~~~~~~~~~~~fl 490 (505)
..++. ...+..||
T Consensus 235 ~n~~V---~~~I~~FL 247 (249)
T 3fle_A 235 ENKDV---ANEIIQFL 247 (249)
T ss_dssp GCHHH---HHHHHHHH
T ss_pred cCHHH---HHHHHHHh
Confidence 33322 22466776
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=119.27 Aligned_cols=213 Identities=15% Similarity=0.002 Sum_probs=123.5
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCC----------CchhHHHcc---cccCCcchHHHHH
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGE----------LGRQWYENG---KFLKKKNTFTDFI 327 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~----------~g~~~~~~~---~~~~~~~~~~D~~ 327 (505)
|.||++||..+... .|......|+++|+. |+.++.++.|. .+......+ .........+|+.
T Consensus 4 ~pvvllHG~~~~~~--~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGNAS--SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCCTT--TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCCcc--hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 45789999876543 377777888888764 33333333221 111000000 0011123456666
Q ss_pred HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCCCcccccccCCCC
Q 010654 328 ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW 402 (505)
Q Consensus 328 ~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 402 (505)
++++.+.++..+ +++.++||||||.+++.++.++|+ +++.+|..++..+....... .. .+...+.|.
T Consensus 82 ~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~-~~-----~~~~~~~p~ 153 (254)
T 3ds8_A 82 IAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN-GM-----DLSFKKLPN 153 (254)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH-CS-----CTTCSSCSS
T ss_pred HHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc-cc-----ccccccCCc
Confidence 777887765322 689999999999999999999998 89999998886553322110 00 011112332
Q ss_pred CHHHHHHHHhCChhhcccCCCCCeEEEEccC------CCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 403 KEEFYFYMKSYSPVDNVKAQNYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 403 ~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~------~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
....+..+... ...+.+ +.| +|.|+|. .|..||+..++.+...++......+.+.+... +++|......
T Consensus 154 ~~~~~~~~~~~--~~~~~~-~~~-vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~-~a~Hs~l~~~ 228 (254)
T 3ds8_A 154 STPQMDYFIKN--QTEVSP-DLE-VLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGE-DAVHQTLHET 228 (254)
T ss_dssp CCHHHHHHHHT--GGGSCT-TCE-EEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESG-GGCGGGGGGS
T ss_pred chHHHHHHHHH--HhhCCC-CcE-EEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCC-CCchhcccCC
Confidence 11222222211 112222 454 9999999 99999999998887777665444555666632 3668654333
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 010654 477 FERLREAAFTYTFLMRAL 494 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l 494 (505)
++ ....+..||.+..
T Consensus 229 ~~---v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 229 PK---SIEKTYWFLEKFK 243 (254)
T ss_dssp HH---HHHHHHHHHHTCC
T ss_pred HH---HHHHHHHHHHHhc
Confidence 33 2334677887754
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-11 Score=115.44 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=75.9
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.+++... . +..|.||++||.++.... |......| +.+|.|+.+|+||.|.+...-. ......
T Consensus 12 ~~~~~~~~~~---~------g~g~~~vllHG~~~~~~~--w~~~~~~l-~~~~~vi~~Dl~G~G~s~~~~~---~~~~~~ 76 (291)
T 3qyj_A 12 TTEARINLVK---A------GHGAPLLLLHGYPQTHVM--WHKIAPLL-ANNFTVVATDLRGYGDSSRPAS---VPHHIN 76 (291)
T ss_dssp CSSCEEEEEE---E------CCSSEEEEECCTTCCGGG--GTTTHHHH-TTTSEEEEECCTTSTTSCCCCC---CGGGGG
T ss_pred cCCeEEEEEE---c------CCCCeEEEECCCCCCHHH--HHHHHHHH-hCCCEEEEEcCCCCCCCCCCCC---Cccccc
Confidence 4777776541 1 234779999998765433 44444555 5689999999999886543110 000011
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
...+++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++.++...+
T Consensus 77 ~~~~~~~~~~~~~~~~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (291)
T 3qyj_A 77 YSKRVMAQDQVEVMSKL--GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129 (291)
T ss_dssp GSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred cCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECC
Confidence 23333333333333321 125799999999999999999999999999887653
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.31 E-value=3.8e-11 Score=114.89 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=70.4
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.|.||++||++++. ..|......|++ .+|.|+.+|+||+|.+...- .....-....+|+.+.++.+... + +
T Consensus 38 ~p~lvllHG~~~~~--~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~--~-~ 109 (316)
T 3c5v_A 38 GPVLLLLHGGGHSA--LSWAVFTAAIISRVQCRIVALDLRSHGETKVKN---PEDLSAETMAKDVGNVVEAMYGD--L-P 109 (316)
T ss_dssp SCEEEEECCTTCCG--GGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSC---TTCCCHHHHHHHHHHHHHHHHTT--C-C
T ss_pred CcEEEEECCCCccc--ccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCC---ccccCHHHHHHHHHHHHHHHhcc--C-C
Confidence 47899999986543 336555566765 38999999999998764310 00011113356666666665321 1 2
Q ss_pred CcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVP 375 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~ 375 (505)
+++.|+||||||.+++.++.+ +|+ ++++|...+
T Consensus 110 ~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 110 PPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp CCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred CCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 689999999999999999985 576 888887654
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=5.1e-12 Score=129.50 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=93.6
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCchhHHHHHH-CCcEEEEEccc-CCCCCchhHHHcccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSSRLSLLD-RGFIFAIAQIR-GGGELGRQWYENGKF 316 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~~~~~l~~-~G~~v~~~d~r-G~~~~g~~~~~~~~~ 316 (505)
+.|... ..++.|+.. ..+++.|+||++|||+...... .|.. ..|++ +|++|+.+||| |..+++.... ..
T Consensus 95 ~edcl~--lnv~~P~~~-~~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~---~~ 166 (542)
T 2h7c_A 95 SEDCLY--LNIYTPADL-TKKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGD---EH 166 (542)
T ss_dssp ESCCCE--EEEEECSCT-TSCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS---TT
T ss_pred CCCCcE--EEEEECCCC-CCCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCc---cc
Confidence 456544 456788765 4456799999999986433222 2333 34554 79999999999 4333322111 11
Q ss_pred cCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCchhh
Q 010654 317 LKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVDV 379 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d~ 379 (505)
..+...+.|+.+|++|+.++ -..||+||.|+|+|+||++++.++.. .+.+|+++|+.+|....
T Consensus 167 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 167 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred CccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 23445689999999999875 24799999999999999999998875 25699999999987653
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-12 Score=133.53 Aligned_cols=226 Identities=15% Similarity=0.071 Sum_probs=128.1
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCchh--H-HHHHH-CCcEEEEEcccCCCCCchhHHHc-
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSS--R-LSLLD-RGFIFAIAQIRGGGELGRQWYEN- 313 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~~--~-~~l~~-~G~~v~~~d~rG~~~~g~~~~~~- 313 (505)
+.|... ..++.|+.. ...++.|+||++|||....... .+... . ..++. .|++|+.+|||.+. +|--....
T Consensus 102 sedcl~--l~v~~P~~~-~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~gf~~~~~~ 177 (544)
T 1thg_A 102 NEDCLY--LNVFRPAGT-KPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAI 177 (544)
T ss_dssp CSCCCE--EEEEEETTC-CTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHH
T ss_pred CCCCeE--EEEEeCCCC-CCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-ccCCCcccc
Confidence 445544 456788765 4456789999999986443322 23221 1 11222 48999999999754 21100000
Q ss_pred ccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCchhhhhh
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~~~~ 382 (505)
.....+...+.|+.+|++|+.++ -..||+||.|+|+|+||.+++.++... ..+|+++|+.+|.......
T Consensus 178 ~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~ 257 (544)
T 1thg_A 178 TAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHD 257 (544)
T ss_dssp HHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCSS
T ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccCc
Confidence 01124456789999999999876 247999999999999999998877642 4589999999985321111
Q ss_pred ccCCCCCCCcccc-cccCCCC---CHHHHHHHHhCChhhcccCC---------CCCe-EEEEccCCCCCCCCChHHHHHH
Q 010654 383 MLDPTIPLTTAEW-EEWGDPW---KEEFYFYMKSYSPVDNVKAQ---------NYPH-ILVTAGLNDPRVMYSEPAKFVA 448 (505)
Q Consensus 383 ~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~sp~~~~~~~---------~~Pp-~Li~~G~~D~~vp~~~~~~~~~ 448 (505)
............. ...|.+. ..+..+.++..++...+... ..++ .+......|..+.+.+..++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~gc~~~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~P~~Dg~~l~~~p~~~~~ 337 (544)
T 1thg_A 258 SSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELFR 337 (544)
T ss_dssp SCCSSSSCHHHHHHHHHTCCTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHSTTTSCGGGTSCCCCCSSSSCSCHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhcCCHHHHHHhhhhcccccccccccccccceeeeCCcccCcCHHHHHh
Confidence 1000000000011 1234331 12445566666653322111 0110 1223445577777888888877
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCC
Q 010654 449 KLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
+.+.+++++ ++--. .++||.+
T Consensus 338 ~g~~~~vp~--l~G~~-~~Eg~~f 358 (544)
T 1thg_A 338 SGRYAKVPY--ISGNQ-EDEGTAF 358 (544)
T ss_dssp TTCSCCCCE--EEEEE-TBTTTTT
T ss_pred cCCCCCccE--EEEee-cCchhhh
Confidence 666666653 33222 2678765
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.7e-09 Score=106.13 Aligned_cols=186 Identities=10% Similarity=0.068 Sum_probs=124.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
..+|++||+.+. ....+... ......++|||||++|++.........|+++|+++++ .+.+....... ...|||
T Consensus 158 ~~~i~i~d~~g~--~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-~~~l~~~~~~~~~~~~sp 232 (415)
T 2hqs_A 158 PYELRVSDYDGY--NQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAFSP 232 (415)
T ss_dssp CEEEEEEETTSC--SCEEEEEE--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEEEECCSSCEEEEEECT
T ss_pred cceEEEEcCCCC--CCEEEeCC--CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-EEEeecCCCcccCEEEcC
Confidence 378999999642 33444433 2345678999999999988766556789999999987 66666443222 234999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|....++ ...|+++|+.+ +... .++.... .+..+.|++| .+++....++..+++++++.. +....
T Consensus 233 dg~~la~~~~~~g--~~~i~~~d~~~-~~~~-~l~~~~~-~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~--~~~~~ 305 (415)
T 2hqs_A 233 DGSKLAFALSKTG--SLNLYVMDLAS-GQIR-QVTDGRS-NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GAPQR 305 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTT-CCEE-ECCCCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCCEE
T ss_pred CCCEEEEEEecCC--CceEEEEECCC-CCEE-eCcCCCC-cccceEECCCCCEEEEEECCCCCcEEEEEECCC--CCEEE
Confidence 9999999886533 35899999976 4433 4444333 4678899876 466666666777898888763 32222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+. .... .+..+.++++++.+++..... ....++++++.+++
T Consensus 306 l~------~~~~--~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 306 IT------WEGS--QNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGG 346 (415)
T ss_dssp CC------CSSS--EEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCC
T ss_pred Ee------cCCC--cccCeEECCCCCEEEEEECcC-CceEEEEEECCCCC
Confidence 21 1111 122245788999877665532 34689999998876
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-09 Score=107.12 Aligned_cols=185 Identities=11% Similarity=0.064 Sum_probs=124.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
...|++|++.+++ .+.+.. .......++|||||++|++.........||++|+++++ .+.++...... ...|||
T Consensus 202 ~~~i~~~d~~tg~--~~~l~~--~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~sp 276 (415)
T 2hqs_A 202 RSALVIQTLANGA--VRQVAS--FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFP 276 (415)
T ss_dssp SCEEEEEETTTCC--EEEEEC--CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECT
T ss_pred CcEEEEEECCCCc--EEEeec--CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-EEeCcCCCCcccceEECC
Confidence 3689999998753 333433 23355678999999999988776667789999999986 77776554322 235999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|++.+..++ ..+|+++++.+ +... .++.... .+..+.|++| .+++....++...++++++.+ +....
T Consensus 277 dg~~l~~~s~~~g--~~~i~~~d~~~-~~~~-~l~~~~~-~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~--~~~~~ 349 (415)
T 2hqs_A 277 DSQNLAFTSDQAG--RPQVYKVNING-GAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQV 349 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTS-SCCE-ECCCSSS-EEEEEEECTTSSEEEEEEECSSCEEEEEEETTT--CCEEE
T ss_pred CCCEEEEEECCCC--CcEEEEEECCC-CCEE-EEecCCC-cccCeEECCCCCEEEEEECcCCceEEEEEECCC--CCEEE
Confidence 9999999986533 35899999886 4433 3443323 4667888876 466666666667899999863 22222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
|.. .. .+..+.++++++.+++.... .....|+++++.++.
T Consensus 350 l~~--------~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 350 LSS--------TF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVSTDGRF 389 (415)
T ss_dssp CCC--------SS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEETTSCC
T ss_pred ecC--------CC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEECCCCc
Confidence 321 11 12234578889877765543 334589999987554
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.20 E-value=9.9e-11 Score=107.16 Aligned_cols=202 Identities=12% Similarity=0.067 Sum_probs=117.2
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCC---cEEEEEcccCCCC--CchhHHH--------cccccC--C----cchH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRG---FIFAIAQIRGGGE--LGRQWYE--------NGKFLK--K----KNTF 323 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G---~~v~~~d~rG~~~--~g~~~~~--------~~~~~~--~----~~~~ 323 (505)
.+.||++||..++.. .|......|+++| +.|+.+|+++.|. +...+.. ...... + ....
T Consensus 4 ~~pvv~iHG~~~~~~--~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 4 MAPVIMVPGSSASQN--RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp CCCEEEECCCGGGHH--HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCCEEEECCCCCCHH--HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 355778999776532 3566677888877 6777776665543 1111100 000011 0 1235
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC-----CCceeEEEecCCchhhhhhccCCCCCCCccccccc
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 398 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~-----p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 398 (505)
+++.++++++.++-. .+++.++||||||.++..++.++ ++.++.+|...+..+.... ..
T Consensus 82 ~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~----~~---------- 145 (250)
T 3lp5_A 82 VWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST----ST---------- 145 (250)
T ss_dssp HHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC----CS----------
T ss_pred HHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc----cc----------
Confidence 778888888877632 36899999999999999988876 5678888877665442210 00
Q ss_pred CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccC----CCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 399 GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGL----NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 399 g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~----~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
.... ..+..+.... ..+.+ ++| +|+|+|+ .|..||+..++.+...++......+.+.+.. .+++|....
T Consensus 146 -~~~~-~~~~~l~~~~--~~lp~-~vp-vl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g-~~a~H~~l~ 218 (250)
T 3lp5_A 146 -TAKT-SMFKELYRYR--TGLPE-SLT-VYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTG-ANTAHSDLP 218 (250)
T ss_dssp -SCCC-HHHHHHHHTG--GGSCT-TCE-EEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTT-TTBSSCCHH
T ss_pred -cccC-HHHHHHHhcc--ccCCC-Cce-EEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeC-CCCchhcch
Confidence 0011 2233333221 12222 565 9999999 9999999888887777665333322233321 145686532
Q ss_pred ChHHHHHHHHHHHHHHHH
Q 010654 475 GRFERLREAAFTYTFLMR 492 (505)
Q Consensus 475 ~~~~~~~~~~~~~~fl~~ 492 (505)
..+ .....+.+||.+
T Consensus 219 e~~---~v~~~I~~FL~~ 233 (250)
T 3lp5_A 219 QNK---QIVSLIRQYLLA 233 (250)
T ss_dssp HHH---HHHHHHHHHTSC
T ss_pred hCH---HHHHHHHHHHhc
Confidence 222 233346777743
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.20 E-value=2.1e-11 Score=121.38 Aligned_cols=112 Identities=12% Similarity=0.038 Sum_probs=81.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|+||++||..+.. ...|.. ....|++ .||.|+.+|+||.|..... ... ..-.....|+.+.++++.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~--~~~--~~~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYS--QAS--QNIRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHH--HHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCccch--hhH--hhHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999987654 223444 4456766 7999999999988765321 110 0112345788888888876534
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.+++.++|||+||.+++.++.++|++++.+++..|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 567899999999999999999999999888888877753
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.7e-10 Score=110.22 Aligned_cols=196 Identities=7% Similarity=0.046 Sum_probs=117.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccc---cceEEEEEeCCCCCceeeeeccccc--ee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRVVG--VD 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~---~~~~l~~~d~~~~~~~~~l~~~~~~--~~ 80 (505)
..+||++++.++ +.+.+... +.+...+.||| ||++|++..... ...+||++|++++. .+.++....+ ..
T Consensus 167 ~~~l~~~d~~~g--~~~~l~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 167 CCRLMRVDLKTG--ESTVILQE--NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCT 241 (388)
T ss_dssp CEEEEEEETTTC--CEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEE
T ss_pred cceEEEEECCCC--ceEEeecC--CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccc
Confidence 367999999876 34555543 33556789999 999999987643 25689999999886 7777765432 22
Q ss_pred -EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC----ceeeEEEEeCC--EEEEEEec------CCee
Q 010654 81 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES----VKLQDIQLFID--HLAVYERE------GGLQ 147 (505)
Q Consensus 81 -~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~d--~l~~~~~~------~~~~ 147 (505)
..|||||++|+|.+...+.....|+++|+++ ++.+.+...... .......|++| .+++.... .+..
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 3499999999998876444334699999987 544422221110 00111235554 45555433 5566
Q ss_pred EEEEEEcCCCCCcccccCCCceeecc----CCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 148 KITTYRLPAVGEPLKSLQGGKSVEFI----DPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 148 ~l~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
.++++++.+ +..+.|+.... .+. .....+..+.+++|++.++|..... ..+.||.+++..+
T Consensus 321 ~i~~~d~~~--~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 321 FLYVFNMKN--GTQHRVARHDT-SWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPES 385 (388)
T ss_dssp EEEEEETTT--TEEEEEEECCC-CCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGG
T ss_pred EEEEEeccC--CceEEeccccC-cccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChh
Confidence 788998763 33333321100 000 0000123356789999888776554 4567999987654
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-11 Score=124.63 Aligned_cols=132 Identities=15% Similarity=0.086 Sum_probs=90.4
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC-chhHHHHHH-CCcEEEEEcccCC-CCCchhHHHcccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-NSSRLSLLD-RGFIFAIAQIRGG-GELGRQWYENGKF 316 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~-~~~~~~l~~-~G~~v~~~d~rG~-~~~g~~~~~~~~~ 316 (505)
+.|...+ .++.|+.. ..++.|+||++|||......... ......|++ .|++|+.+|||.+ -||+... ....
T Consensus 93 ~edcl~l--~v~~P~~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~ 166 (543)
T 2ha2_A 93 SEDCLYL--NVWTPYPR--PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSRE 166 (543)
T ss_dssp ESCCCEE--EEEEESSC--CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSS
T ss_pred CCcCCeE--EEeecCCC--CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--CCCC
Confidence 4566555 55677653 34568999999998643322211 122356666 7999999999942 2222110 0011
Q ss_pred cCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCch
Q 010654 317 LKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFV 377 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 377 (505)
..+...+.|+.+|++|+.++- ..||+||.|+|+|+||++++.++... +.+|+++|+.+|..
T Consensus 167 ~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 167 APGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 234467899999999998762 37999999999999999998887642 46899999998853
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.18 E-value=4.7e-11 Score=121.01 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=90.8
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCchhHHHHHHCC-cEEEEEcccC----CCCCchhHHHc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSSRLSLLDRG-FIFAIAQIRG----GGELGRQWYEN 313 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~~~~~l~~~G-~~v~~~d~rG----~~~~g~~~~~~ 313 (505)
+.|+..+ .++.|+. ..++.|+||++|||....... ........|+++| ++|+.+|||. .+..+.... .
T Consensus 81 ~edcl~l--~v~~P~~---~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~-~ 154 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAA---DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFG-E 154 (498)
T ss_dssp BSCCCEE--EEEESCS---SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTC-G
T ss_pred CCCCcEE--EEEecCC---CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhcc-c
Confidence 4566554 4567753 246789999999987332221 1112246788876 9999999993 332221100 0
Q ss_pred ccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCchh
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFVD 378 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d 378 (505)
.....+...+.|+.+|++|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 155 ~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 155 AYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 011233467899999999998862 36999999999999999998887742 458999999998654
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.6e-11 Score=108.45 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=62.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 339 (505)
++.|.||++||..+... .|......|. .+|.|+.+|.||+|.+... ..+|+.+.++.+.+. +..
T Consensus 11 ~~~~~lv~lhg~g~~~~--~~~~~~~~L~-~~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA--SFRPLHAFLQ-GECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQELNLR 75 (242)
T ss_dssp TCCCEEESSCCCCHHHH--HHHHHHHHHC-CSCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTTCCCC
T ss_pred CCCceEEEECCCCCCHH--HHHHHHHhCC-CCeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHHHHhh
Confidence 34577899999876432 2444444553 5799999999999875321 124566666655443 222
Q ss_pred CCCcEEEEeeChHHHHHHHHHhh------CCCce
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNM------RPDLF 367 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~------~p~~~ 367 (505)
..+++.++||||||.++..++.+ +|+.+
T Consensus 76 ~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v 109 (242)
T 2k2q_B 76 PDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAV 109 (242)
T ss_dssp CCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSE
T ss_pred cCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEE
Confidence 23689999999999999998875 57654
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-10 Score=109.94 Aligned_cols=204 Identities=13% Similarity=0.107 Sum_probs=114.7
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHH-HHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~ 339 (505)
+..|.||++||..+......|......|. .+|.|+.+|+||.|.... ....++++.+.+. .+.+. .
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~----------~~~~~~~~a~~~~~~l~~~--~ 131 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEGEP----------LPSSMAAVAAVQADAVIRT--Q 131 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTSSTTCC----------BCSSHHHHHHHHHHHHHHH--C
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCCCCCCC----------CCCCHHHHHHHHHHHHHHh--c
Confidence 45689999999876542244554444443 569999999999876321 1134455544433 44443 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCchhhhh----hccCCCCCCCcccc-cccCCCCCHHH----H
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVDVLT----TMLDPTIPLTTAEW-EEWGDPWKEEF----Y 407 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d~~~----~~~~~~~~~~~~~~-~~~g~~~~~~~----~ 407 (505)
+.+++.++|||+||.+++.++.++| ++++++|...+...... .+.. .. ...+ .....+..... .
T Consensus 132 ~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~ 207 (300)
T 1kez_A 132 GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLE-EL---TATLFDRETVRMDDTRLTALG 207 (300)
T ss_dssp SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHH-HH---HGGGCCCCSSCCCHHHHHHHH
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHH-HH---HHHHHhCcCCccchHHHHHHH
Confidence 3468999999999999999999887 48899988877532111 0000 00 0000 00000111111 1
Q ss_pred HHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc-CCCCCeEEEEecCCCCCCCCC-ChHHHHHHHHH
Q 010654 408 FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM-KTDDNILLFKCELGAGHFSKS-GRFERLREAAF 485 (505)
Q Consensus 408 ~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~ 485 (505)
.++..... ....++++| +|+++| .|+.+++.. .. +... ..+.+++.++ + ||.... ..++.+. ..
T Consensus 208 ~~~~~~~~-~~~~~i~~P-~lii~G-~d~~~~~~~-~~----~~~~~~~~~~~~~i~---g-gH~~~~~e~~~~~~--~~ 273 (300)
T 1kez_A 208 AYDRLTGQ-WRPRETGLP-TLLVSA-GEPMGPWPD-DS----WKPTWPFEHDTVAVP---G-DHFTMVQEHADAIA--RH 273 (300)
T ss_dssp HHHHHTTT-CCCCCCSCC-BEEEEE-SSCSSCCCS-SC----CSCCCSSCCEEEEES---S-CTTTSSSSCSHHHH--HH
T ss_pred HHHHHHhc-CCCCCCCCC-EEEEEe-CCCCCCCcc-cc----hhhhcCCCCeEEEec---C-CChhhccccHHHHH--HH
Confidence 11111111 123667888 999999 566777665 22 2222 2245777787 7 897642 4444333 25
Q ss_pred HHHHHHHhhC
Q 010654 486 TYTFLMRALS 495 (505)
Q Consensus 486 ~~~fl~~~l~ 495 (505)
+.+||.+...
T Consensus 274 i~~fl~~~~~ 283 (300)
T 1kez_A 274 IDAWLGGGNS 283 (300)
T ss_dssp HHHHHTCC--
T ss_pred HHHHHHhccC
Confidence 7888876654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=5.1e-11 Score=121.60 Aligned_cols=131 Identities=19% Similarity=0.188 Sum_probs=89.2
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCchh--H-HHHH-HCCcEEEEEcccCCC-CCc--hhHH
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSS--R-LSLL-DRGFIFAIAQIRGGG-ELG--RQWY 311 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~~--~-~~l~-~~G~~v~~~d~rG~~-~~g--~~~~ 311 (505)
+.|. +...++.|+.. ...++.|+||++|||....... .+... . ..++ +.|++|+.+|||.+. ++. .+..
T Consensus 94 sedc--l~l~v~~P~~~-~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~ 170 (534)
T 1llf_A 94 SEDC--LTINVVRPPGT-KAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIK 170 (534)
T ss_dssp CSCC--CEEEEEECTTC-CTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHH
T ss_pred CCCC--eEEEEEECCCC-CCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCccccc
Confidence 3454 44566788764 4456789999999986443322 13221 1 1122 258999999999754 111 1111
Q ss_pred HcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCc
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPF 376 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~ 376 (505)
....+...+.|+.+|++|+.++ -..||+||.|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 171 ---~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 171 ---AEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp ---HHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred ---ccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 1134456789999999999875 237999999999999999888777653 4689999999884
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.6e-10 Score=109.09 Aligned_cols=211 Identities=11% Similarity=0.027 Sum_probs=113.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..|.||++||.........|......| +.||.|+.+|+||.|..... ........+|+.+.++.+. +
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~------~~~~~~~~~~~~~~l~~~~-----~ 146 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGGQAL------PATLTVLVRSLADVVQAEV-----A 146 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTTCCE------ESSHHHHHHHHHHHHHHHH-----T
T ss_pred CCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCCCCC------CCCHHHHHHHHHHHHHHhc-----C
Confidence 4468899999942222233455555566 78999999999998752211 1111122333333333322 1
Q ss_pred CCcEEEEeeChHHHHHHHHHhhC---CCceeEEEecCCchhhhh-----hccCCCCCCCcccccccCCCC-CHHHH----
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMR---PDLFKAAVAAVPFVDVLT-----TMLDPTIPLTTAEWEEWGDPW-KEEFY---- 407 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~~d~~~-----~~~~~~~~~~~~~~~~~g~~~-~~~~~---- 407 (505)
.+++.++|||+||.++..++.++ |+.++++|...+...... .+..............+.... .....
T Consensus 147 ~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (319)
T 3lcr_A 147 DGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQV 226 (319)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHH
Confidence 26799999999999999998876 777888887655321100 000000000000000010000 01111
Q ss_pred HHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC--hHHHHHHHHH
Q 010654 408 FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG--RFERLREAAF 485 (505)
Q Consensus 408 ~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~ 485 (505)
..+..... .....+++| +|+++|++ +.+++.....+.+.+.. ..+++.++ ++|..... .+..+ ...
T Consensus 227 ~~~~~~~~-~~~~~i~~P-vLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~----g~H~~~~~~~~~~~v--a~~ 294 (319)
T 3lcr_A 227 WCLELLRG-WRPEGLTAP-TLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAP----GDHFTIIEGEHVAST--AHI 294 (319)
T ss_dssp HHHHHTTT-CCCCCCSSC-EEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEES----SCTTGGGSTTTHHHH--HHH
T ss_pred HHHHHHhc-CCCCCcCCC-EEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeC----CCcHHhhCcccHHHH--HHH
Confidence 11111111 122567888 99999987 67777888888776653 34555664 47754322 33333 335
Q ss_pred HHHHHHHhhC
Q 010654 486 TYTFLMRALS 495 (505)
Q Consensus 486 ~~~fl~~~l~ 495 (505)
+.+||.+...
T Consensus 295 i~~fL~~~~~ 304 (319)
T 3lcr_A 295 VGDWLREAHA 304 (319)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhccc
Confidence 7889988654
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=3.1e-10 Score=108.15 Aligned_cols=121 Identities=12% Similarity=0.009 Sum_probs=86.6
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
++.++...++.|+.. . .+..+.||++||..+.... .|. .....|.++||.|+.+|+||.|.... .
T Consensus 12 ~~~~l~~~i~~p~~~-~-~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~-----------~ 77 (317)
T 1tca_A 12 PKSVLDAGLTCQGAS-P-SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLNDT-----------Q 77 (317)
T ss_dssp CHHHHHHTEEETTBC-T-TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSCH-----------H
T ss_pred CHHHHhheeeCCCCC-C-CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCcH-----------H
Confidence 445666677778765 3 2345679999998654321 133 45577888899999999998753211 1
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCchh
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVD 378 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d 378 (505)
...+++.+.++++.++.. .+++.++|||+||.++.+++..++ ++++++|+.+|..+
T Consensus 78 ~~~~~l~~~i~~~~~~~g--~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 78 VNTEYMVNAITALYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhC--CCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 235777888888876532 378999999999999998887765 78999999887543
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=3.3e-10 Score=115.72 Aligned_cols=132 Identities=14% Similarity=0.070 Sum_probs=90.2
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC-chhHHHHHH-CCcEEEEEcccCCC-CCchhHHHcccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-NSSRLSLLD-RGFIFAIAQIRGGG-ELGRQWYENGKF 316 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~-~~~~~~l~~-~G~~v~~~d~rG~~-~~g~~~~~~~~~ 316 (505)
+.|... ..++.|... .++.|+||++|||......... ......|++ .|++|+.+|||.+. ||.... ....
T Consensus 89 ~edcl~--lnv~~P~~~---~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~ 161 (529)
T 1p0i_A 89 SEDCLY--LNVWIPAPK---PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--GNPE 161 (529)
T ss_dssp CSCCCE--EEEEEESSC---CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCTT
T ss_pred CCcCCe--EEEeeCCCC---CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--CCCC
Confidence 445544 456778654 2678999999998643222211 112356776 79999999999431 211100 0011
Q ss_pred cCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCchh
Q 010654 317 LKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFVD 378 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d 378 (505)
..+...+.|+.+|++|+.++ -..||+||.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 162 ~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 23445789999999999875 247999999999999999999888753 358999999998653
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.3e-10 Score=106.43 Aligned_cols=100 Identities=11% Similarity=-0.011 Sum_probs=64.3
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..|.||++||+++.... |..... | ..+|.|+.+|+||.+... .....++++.+.+..++..-. .
T Consensus 19 ~~~~~lv~lhg~~~~~~~--~~~~~~-l-~~~~~v~~~d~~G~~~~~----------~~~~~~~~~~~~~~~~i~~~~-~ 83 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFS--YASLPR-L-KSDTAVVGLNCPYARDPE----------NMNCTHGAMIESFCNEIRRRQ-P 83 (265)
T ss_dssp TSSEEEEEECCTTCCGGG--GTTSCC-C-SSSEEEEEEECTTTTCGG----------GCCCCHHHHHHHHHHHHHHHC-S
T ss_pred CCCCEEEEECCCCCCHHH--HHHHHh-c-CCCCEEEEEECCCCCCCC----------CCCCCHHHHHHHHHHHHHHhC-C
Confidence 456889999998765432 333334 3 678999999999963211 111234444433332222211 1
Q ss_pred CCcEEEEeeChHHHHHHHHHh---hCCCceeEEEecCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLN---MRPDLFKAAVAAVP 375 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~---~~p~~~~a~v~~~~ 375 (505)
..++.++|||+||.++..++. .++++++.++...+
T Consensus 84 ~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~ 121 (265)
T 3ils_A 84 RGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDA 121 (265)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcC
Confidence 257999999999999999887 67777888877654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.1e-11 Score=121.12 Aligned_cols=126 Identities=14% Similarity=0.099 Sum_probs=85.8
Q ss_pred eeEEEEEe-----CCccCCCCC----CcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCC-CCchhHHHcc
Q 010654 246 IPICIVYR-----KNLVKLDGS----DPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENG 314 (505)
Q Consensus 246 i~~~l~~p-----~~~~~~~~~----~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~-~~g~~~~~~~ 314 (505)
+...++.| ... ..++ .|+||++|||........ .......|+++|++|+.+|||.+. |+.... .
T Consensus 91 L~lnv~~P~~~~~~~~--~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~---~ 165 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA--ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLN---S 165 (551)
T ss_dssp CEEEEEEEGGGCCCC----------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCS---S
T ss_pred eEEEEEecCccccccc--cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCc---c
Confidence 45566778 322 2233 899999999864322211 111235678899999999999642 111100 0
Q ss_pred cccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCc
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPF 376 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 376 (505)
....+...+.|+.+|++|+.++- ..|++||.|+|+|+||.+++.++.. .+.+|+++|+.+|.
T Consensus 166 ~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 166 TSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 11234467899999999998862 3699999999999999999988875 35689999999885
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=99.06 E-value=4.5e-10 Score=114.84 Aligned_cols=132 Identities=16% Similarity=0.135 Sum_probs=90.2
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC-chhHHHHH-HCCcEEEEEcccCCC-CCchhHHHcccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-NSSRLSLL-DRGFIFAIAQIRGGG-ELGRQWYENGKF 316 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~-~~~~~~l~-~~G~~v~~~d~rG~~-~~g~~~~~~~~~ 316 (505)
+.|...+ .++.|... .++.|+||++|||......... ......|+ +.|++|+.+|||.+. ||.... ....
T Consensus 91 sedcl~l--nv~~P~~~---~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~ 163 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPR---PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQE 163 (537)
T ss_dssp CSCCCEE--EEEECSSC---CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSS
T ss_pred CCcCCeE--EEeccCCC---CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCC
Confidence 4566544 55677653 3678999999998643322211 12235666 789999999999431 111100 0011
Q ss_pred cCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCchh
Q 010654 317 LKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVD 378 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d 378 (505)
..+...+.|+.+|++|+.++- ..||+||.|+|+|+||.+++.++.. ...+|+++|+.+|...
T Consensus 164 ~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 164 APGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 234467899999999998862 3699999999999999999888764 2358999999998643
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.9e-10 Score=118.08 Aligned_cols=132 Identities=16% Similarity=0.158 Sum_probs=87.4
Q ss_pred ECCCCceeeEEEEEeCCccC-CCCCCcEEEEEcCCCCcCCCC---C----CchhHHHHHHC-CcEEEEEcccCCC-CCch
Q 010654 239 SASDGTQIPICIVYRKNLVK-LDGSDPLLLYGYGSYEICNDP---A----FNSSRLSLLDR-GFIFAIAQIRGGG-ELGR 308 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~-~~~~~P~iv~~hGg~~~~~~~---~----~~~~~~~l~~~-G~~v~~~d~rG~~-~~g~ 308 (505)
.+.|... ..++.|... . ..++.|+||++|||....... . +......|+.+ |++|+.+|||.+. ++..
T Consensus 76 ~sedcl~--lnv~~P~~~-~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~ 152 (579)
T 2bce_A 76 GNEDCLY--LNIWVPQGR-KEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLS 152 (579)
T ss_dssp SCSCCCE--EEEEEEECS-SSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CCCCCCE--EEEEECCCC-CCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCc
Confidence 3556544 456778654 2 346789999999986322111 1 11123456654 7999999999432 2211
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCc
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPF 376 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 376 (505)
.. .....+...+.|+.+|++|+.++ -..||+||.|+|+|+||.+++.++.. ...+|+++|+.+|.
T Consensus 153 ~~---~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 153 TG---DSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CS---STTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CC---CCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 00 01122334689999999999875 23799999999999999999888764 24689999988874
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-08 Score=98.77 Aligned_cols=173 Identities=9% Similarity=0.040 Sum_probs=111.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccceeEEee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVGVDTAAS 84 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s 84 (505)
..+||++++.+++ .+.+ . ....+.|||||++|++..... ...+||++|+++++ .+.++.........||
T Consensus 42 ~~~l~~~d~~~~~--~~~l--~----~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIENLKNNA--RRFI--E----NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS-SKKILEAKNIRSLEWN 112 (347)
T ss_dssp EEEEEEEETTTCC--EEEE--E----SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE-EEEEEEESEEEEEEEC
T ss_pred cceEEEEeCCCCc--eEEc--c----cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc-eEEEEcCCCccceeEC
Confidence 4579999997753 3333 1 234689999999999987654 56789999999886 7777654431223499
Q ss_pred eeCCEEEEEEcCC-----------------C-----CCCceEEEeeCCCCCCc-eEEEcCCCCceeeEEEEeCCEEEEEE
Q 010654 85 HRGNHFFITRRSD-----------------E-----LFNSELLACPVDNTSET-TVLIPHRESVKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 85 ~dg~~l~~~~~~~-----------------~-----~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~d~l~~~~ 141 (505)
|||++|+|.+... + ....+|+++++++ ++. + .++.. .+..+.|++|+++++.
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~-~~~~~-~l~~~---~~~~~~~spdg~~~~~ 187 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES-EEVIE-EFEKP---RFSSGIWHRDKIVVNV 187 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT-TEEEE-EEEEE---TTCEEEEETTEEEEEE
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC-CeEEe-eecCC---CcccccCCCCeEEEEE
Confidence 9999999997531 1 1136899999976 544 3 34432 4678899999955555
Q ss_pred ecCC-------eeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCC----CCceEEEEE
Q 010654 142 REGG-------LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR----TPPSVYDYD 208 (505)
Q Consensus 142 ~~~~-------~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~ 208 (505)
..+. ..++++++ . +. .+.|.. . ..+. .++++++.+++...... ....|++++
T Consensus 188 ~~~~~~~~~~~~~~l~~~d-~--~~-~~~l~~--------~-~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE-D--GK-EEKMFE--------K-VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE-T--TE-EEEEEE--------E-ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ecccccccccccccEEEeC-C--Cc-eEEecc--------C-ccee--eECCCCCEEEEEEccccCCccccceEEEEC
Confidence 4432 34666666 2 32 322221 1 1121 12788998887765432 345789888
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-08 Score=105.55 Aligned_cols=197 Identities=12% Similarity=0.078 Sum_probs=118.7
Q ss_pred CceEEEEECC--C-CCCCCeEEEEec---CCceEEEEEEeCCCcEEEEEecc-------ccceEEEEEeCCC------CC
Q 010654 7 PDKAWLHKLE--A-DQSNDICLYHEK---DDIYSLGLQASESKKFLFIASES-------KITRFVFYLDVSK------PE 67 (505)
Q Consensus 7 ~~~l~~~~lg--t-~~~~~~~~~~~~---~~~~~~~~~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~------~~ 67 (505)
..+||++++. + + +...+...+ .......++|||||++|++.... .....||++|+++ +.
T Consensus 101 ~~~l~~~~~~~~g~~--~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 101 DQRLYAFEPDAPGGA--VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TCCEEEECTTSTTCC--CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCeEEEEcCCCCCCC--CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 4679999986 2 3 233443321 22345588999999999988765 3347999999998 65
Q ss_pred ceeeee-cccccee-EEeeeeCCEEEEEEcCCCC---CCceEEEeeCCCCC---CceEEEcCCCCceeeEEEEeCC-EEE
Q 010654 68 ELRVLT-PRVVGVD-TAASHRGNHFFITRRSDEL---FNSELLACPVDNTS---ETTVLIPHRESVKLQDIQLFID-HLA 138 (505)
Q Consensus 68 ~~~~l~-~~~~~~~-~~~s~dg~~l~~~~~~~~~---~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~d-~l~ 138 (505)
.+.++ ....... ..|||||++|++.+..... ....|+++|+++.+ ... .+.......+..+.|++| .++
T Consensus 179 -~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~-~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 179 -VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR-TLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp -SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE-EEEEETTBCEEEEEECTTSCEE
T ss_pred -eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE-EeCCCCCceEcceEECCCCeEE
Confidence 77777 4432222 3499999999999865311 23589999998323 233 333332334678899876 467
Q ss_pred EEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeee--ecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 139 VYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS--IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 139 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+....++..+++++++. ++..+++..... ....+.+. +..+.++++ +.+++..+. .-..||.+++.+++
T Consensus 257 ~~~~~~~~~~l~~~~~~--~~~~~~l~~~~~-~~~~p~w~~~~~~~~~~~~-~~~~~~~~~--~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPA--TGAATQLCRREE-EFAGPLWTPGMRWFAPLAN-GLIAVVHGK--GAAVLGILDPESGE 327 (662)
T ss_dssp EEECTTSSCEEEEECTT--TCCEEESSCCSS-BSSCCCCSTTCCSEEECTT-SCEEEEEBS--SSCEEEEEETTTTE
T ss_pred EEECCCCCeEEEEEECC--CCceeecccccc-cccCccccccCceEeEeCC-CEEEEEEEc--CccEEEEEECCCCc
Confidence 77777776678888764 333333332111 10011111 011122234 446677665 55689999987665
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.8e-09 Score=111.37 Aligned_cols=118 Identities=17% Similarity=0.085 Sum_probs=80.7
Q ss_pred CCCCcEEEEEcCCCCcCCCCCC-chhHHHHHH-CCcEEEEEcccC-CCCCch---hHHH-cccccCCcchHHHHHHHHHH
Q 010654 260 DGSDPLLLYGYGSYEICNDPAF-NSSRLSLLD-RGFIFAIAQIRG-GGELGR---QWYE-NGKFLKKKNTFTDFIACAEY 332 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~-~~~~~~l~~-~G~~v~~~d~rG-~~~~g~---~~~~-~~~~~~~~~~~~D~~~~~~~ 332 (505)
.++.|+||++|||......... ......|++ .|++|+.+|||- .-||.. .+.. ......+...+.|+.+|++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 3578999999998643322211 112345665 699999999993 212211 1100 01123345678999999999
Q ss_pred HHHcC---CCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCch
Q 010654 333 LIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFV 377 (505)
Q Consensus 333 l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 377 (505)
+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 98862 36999999999999999998887742 35899999988753
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.5e-08 Score=95.18 Aligned_cols=168 Identities=10% Similarity=0.044 Sum_probs=108.9
Q ss_pred CceEEEEECCCCCCCC-eEEEEecCCceEEEEEEeCCCcEEEEEeccc------c-ceEEEEEeCCCCCceeeeeccccc
Q 010654 7 PDKAWLHKLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESK------I-TRFVFYLDVSKPEELRVLTPRVVG 78 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~-~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~------~-~~~l~~~d~~~~~~~~~l~~~~~~ 78 (505)
..+||++++.++ +. ..+.. + ....+.||||| +++..... . ..+||++| +++ .+.++.. +
T Consensus 151 ~~~l~~~d~~~~--~~~~~l~~-~---~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~--~ 217 (347)
T 2gop_A 151 KTTFWIFDTESE--EVIEEFEK-P---RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK--V 217 (347)
T ss_dssp EEEEEEEETTTT--EEEEEEEE-E---TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE--E
T ss_pred cceEEEEECCCC--eEEeeecC-C---CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc-eEEeccC--c
Confidence 467999999775 23 33333 2 23467899999 56655432 2 56899999 564 7777755 3
Q ss_pred eeEEeeeeCCEEEEEEcCCC---CCCceEEEeeCCCCCCceEEEcCCCCceeeE-EEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 79 VDTAASHRGNHFFITRRSDE---LFNSELLACPVDNTSETTVLIPHRESVKLQD-IQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 79 ~~~~~s~dg~~l~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
....+||||++|++.++... ....+|++++ + +... .+....+..+.. +.|+ |++++....++..+++ ++
T Consensus 218 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~-~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~- 290 (347)
T 2gop_A 218 SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVM-GILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IW- 290 (347)
T ss_dssp SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEE-ESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EE-
T ss_pred ceeeECCCCCEEEEEEccccCCccccceEEEEC--C-CceE-eccccCCcccCCccEEc-CcEEEEEecCCcEEEE-Ec-
Confidence 33346999999999986531 1346899999 3 3433 455454556775 8898 7777778888877776 65
Q ss_pred CCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEE
Q 010654 155 PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYD 208 (505)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 208 (505)
+ +. ...+. +. ...+..+++++ .++++.++...|+++|.++
T Consensus 291 ~--g~-~~~~~-------~~-~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 291 D--GE-IKPIA-------KG-RHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp S--SS-EEEEE-------CS-SSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred C--Cc-eEEEe-------cC-CCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 3 43 22221 11 11222233444 5889999999999999997
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.93 E-value=6.7e-08 Score=90.19 Aligned_cols=188 Identities=15% Similarity=0.100 Sum_probs=119.0
Q ss_pred ceEEEEECCC-CCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeeccccceeEEeee
Q 010654 8 DKAWLHKLEA-DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVDTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt-~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~ 85 (505)
..|++|++.+ + +...+...........+.|||||++|++..... ....||.+++.++. .+.+..........|+|
T Consensus 62 ~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~sp 138 (297)
T 2ojh_A 62 GLLYRLSLAGDP--SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSP 138 (297)
T ss_dssp TEEEEEESSSCC--SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECT
T ss_pred CeEEEEeCCCCC--CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECC
Confidence 4799999977 4 234444332222334678999999998887543 46799999998886 66666544322335999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||+.|++....++ ..+|+.+++.+ +... .+..... .+..+.|+++ .+++....++..+++.+++. +.....
T Consensus 139 dg~~l~~~~~~~~--~~~l~~~~~~~-~~~~-~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~--~~~~~~ 211 (297)
T 2ojh_A 139 DGKSFTYCGIRDQ--VFDIYSMDIDS-GVET-RLTHGEG-RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD--GSSVER 211 (297)
T ss_dssp TSSEEEEEEEETT--EEEEEEEETTT-CCEE-ECCCSSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT--SSCEEE
T ss_pred CCCEEEEEECCCC--ceEEEEEECCC-Ccce-EcccCCC-ccccceECCCCCEEEEEecCCCCccEEEECCC--CCCcEE
Confidence 9999998876533 35888888865 3333 3433333 4678899876 35555555666667666654 333322
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCC-------CCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR-------TPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~p~~~~~~~~~~~~ 213 (505)
+. .....+..+.++++++.+++...... ....|+++++.+++
T Consensus 212 ~~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 212 IT--------DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp CC--------CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred Ee--------cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 22 11112223456788988877766533 22579999988776
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-09 Score=109.77 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=84.1
Q ss_pred eeEEEEEeCCccC---CCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHC-CcEEEEEcccCCC-CCchhHHHcccccCC
Q 010654 246 IPICIVYRKNLVK---LDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDR-GFIFAIAQIRGGG-ELGRQWYENGKFLKK 319 (505)
Q Consensus 246 i~~~l~~p~~~~~---~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~-G~~v~~~d~rG~~-~~g~~~~~~~~~~~~ 319 (505)
+...++.|... . .+++.|+||++|||...... ..+.. ..|+++ |++|+.+|||.+. ||... ......+
T Consensus 112 L~l~v~~P~~~-~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~---~~~~~~~ 185 (574)
T 3bix_A 112 LYLNIYVPTED-DIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLST---GDQAAKG 185 (574)
T ss_dssp CEEEEEEEC---------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCC---SSSSCCC
T ss_pred CEEEEEECCCC-CcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcC---CCCCCCC
Confidence 44566788653 2 23568999999998643322 12332 456665 7999999999532 11100 0011234
Q ss_pred cchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCC
Q 010654 320 KNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVP 375 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~ 375 (505)
...+.|+.+|++|+.++ -..||+||.|+|.|+||.+++.++.... .+|+.+|+.+|
T Consensus 186 n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 186 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 46789999999999885 2369999999999999999988886533 57999998876
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.1e-07 Score=91.12 Aligned_cols=193 Identities=11% Similarity=0.014 Sum_probs=117.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEE--EEeCCCcEEEEEecc-------------------ccceEEEEEeCCCC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGL--QASESKKFLFIASES-------------------KITRFVFYLDVSKP 66 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~--~~SpDg~~i~~~~~~-------------------~~~~~l~~~d~~~~ 66 (505)
..||++++.++ +.+.++..+ ..+.... ..+|||++++..... .....||++|++++
T Consensus 102 ~~l~~~d~~~g--~~~~~~~~~-~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 102 RNLMRVDLATL--EENVVYQVP-AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp TEEEEEETTTC--CEEEEEECC-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred CeEEEEECCCC--cceeeeech-hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 47999999875 345566543 3344333 349999998754311 12478999999999
Q ss_pred Cceeeeeccccce-eEEeee-eCCEEEEEEcCCC-CCCceEEEeeCCCCCCceEEEcCCCC-ceeeEEEEeCC--EEEEE
Q 010654 67 EELRVLTPRVVGV-DTAASH-RGNHFFITRRSDE-LFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLFID--HLAVY 140 (505)
Q Consensus 67 ~~~~~l~~~~~~~-~~~~s~-dg~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~d--~l~~~ 140 (505)
+ .+.++...... ...||| ||++|+|.+.... ....+|+++++++ +..+ .++.... ..+..+.|++| .|++.
T Consensus 179 ~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 179 E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG-TNMR-KVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS-CCCE-ESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC-CceE-EeeeCCCCcccccceECCCCCEEEEE
Confidence 6 77777554322 234999 9999999987421 1245999999876 4443 4444332 34667889886 47777
Q ss_pred EecCCeeE--EEEEEcCCCCCcccccCCCceeeccCCee---eecCCCCcccCCEEEEEEec-----CCCCceEEEEECC
Q 010654 141 EREGGLQK--ITTYRLPAVGEPLKSLQGGKSVEFIDPVY---SIDPSESVFSSRILRFHYSS-----LRTPPSVYDYDMD 210 (505)
Q Consensus 141 ~~~~~~~~--l~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~ 210 (505)
...++... ++++++.+ +..+.+. .++.... ...+..+++|++.+++.... ......|+++++.
T Consensus 256 ~~~~~~~~~~l~~~d~~~--g~~~~l~-----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPET--LENRQLT-----SMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp EEETTCCCEEEEEECTTT--CCEEEEE-----EECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred ecCCCCCcceEEEEecCC--CceEEEE-----cCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 76665544 88888763 3222221 1111000 11223578899988876643 2456789999998
Q ss_pred CCc
Q 010654 211 MGI 213 (505)
Q Consensus 211 ~~~ 213 (505)
+++
T Consensus 329 ~~~ 331 (388)
T 3pe7_A 329 NGT 331 (388)
T ss_dssp TTE
T ss_pred CCc
Confidence 876
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-08 Score=100.35 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=83.9
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH------CCcEEEEEcccCCCCCchhHHHccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD------RGFIFAIAQIRGGGELGRQWYENGK 315 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~------~G~~v~~~d~rG~~~~g~~~~~~~~ 315 (505)
+|.+|+.....++. ...|.||++||.+++.. .|......|++ .||.|+++|+||.|.+...-
T Consensus 93 ~g~~i~~~~~~~~~-----~~~~pllllHG~~~s~~--~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~----- 160 (408)
T 3g02_A 93 EGLTIHFAALFSER-----EDAVPIALLHGWPGSFV--EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP----- 160 (408)
T ss_dssp TTEEEEEEEECCSC-----TTCEEEEEECCSSCCGG--GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSC-----
T ss_pred CCEEEEEEEecCCC-----CCCCeEEEECCCCCcHH--HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCC-----
Confidence 89999866443322 34577999999987643 36666677877 59999999999998764321
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 316 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
......++++.+.+..+.++-.++ +++.++|+|+||.+++.++.++|++....+...++
T Consensus 161 -~~~~~~~~~~a~~~~~l~~~lg~~-~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 -LDKDFGLMDNARVVDQLMKDLGFG-SGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp -SSSCCCHHHHHHHHHHHHHHTTCT-TCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred -CCCCCCHHHHHHHHHHHHHHhCCC-CCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 012244566666666555542221 28999999999999999999998877666665443
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.2e-09 Score=105.95 Aligned_cols=112 Identities=9% Similarity=0.010 Sum_probs=81.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|+||++||.++.. ...|.. ....|+++ ||.|+.+|+||.|..... ... ..-....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~--~~~--~~~~~~~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYT--QAS--YNTRVVGAEIAFLVQVLSTEMG 142 (452)
T ss_dssp TTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHH--HHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCchh--HhH--hhHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999987654 233554 34566664 999999999998765421 110 0011345678888888875534
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.+++.++|||+||.+++.++.++|++++.++...|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 567899999999999999999999999999999887653
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.88 E-value=7.8e-09 Score=97.03 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=75.2
Q ss_pred CCCcEEEEEcCCCCcCC---CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 261 GSDPLLLYGYGSYEICN---DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~---~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
++.|.||++||..+... ...|......|.++||.|+.+|+||.+... ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-------------~~~~~~~~~i~~~~~~- 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-------------VRGEQLLQQVEEIVAL- 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------------HHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-------------hhHHHHHHHHHHHHHH-
Confidence 44678999999766532 235666778899999999999999876532 1234444444444443
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.+.+++.++|||+||.++..++.++|+.++++|..++.
T Consensus 71 -~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 71 -SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp -HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 13468999999999999999999899999999988774
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-07 Score=92.62 Aligned_cols=196 Identities=8% Similarity=-0.038 Sum_probs=116.1
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEecccc---ceEEEEEeCCCCCceeeeeccccc-ee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKI---TRFVFYLDVSKPEELRVLTPRVVG-VD 80 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~---~~~l~~~d~~~~~~~~~l~~~~~~-~~ 80 (505)
...+||++++.++ +.+.+... ......+.||| ||++|++...... ...||++|++++. .+.++....+ ..
T Consensus 166 ~~~~l~~~d~~~g--~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 166 PTCRLIKVDIETG--ELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHAEGESC 240 (396)
T ss_dssp CCEEEEEEETTTC--CEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCCTTEEE
T ss_pred CcceEEEEECCCC--cEEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeEeeccCCCccc
Confidence 4567999999775 34455543 33455789999 8999888865322 2689999998876 6777653212 11
Q ss_pred --EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC-CE-EEEEEe--------------
Q 010654 81 --TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DH-LAVYER-------------- 142 (505)
Q Consensus 81 --~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-d~-l~~~~~-------------- 142 (505)
..|||||++|++.+..++.....|+++|+++ +... .+..... .. +.|++ |+ +++...
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~-~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPET-LENE-EVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTT-CCEE-EEEECCS--EE-EEEECSSSSEEEEEECCC----------C
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCC-CCeE-EeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 3499999999999876443334599999976 4433 2332222 22 67776 53 333322
Q ss_pred cCCeeEEEEEEcCCCCCcccccCCCce-eec--cCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 143 EGGLQKITTYRLPAVGEPLKSLQGGKS-VEF--IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 143 ~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
.++...++++++.. +..+.|..... +.. .+.......+.++++++.++|..... .+.++|.+++.++..
T Consensus 316 ~~~~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 316 IENDPFLYVLNTKA--KSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYK 387 (396)
T ss_dssp CCCCCEEEEEETTT--TBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC
T ss_pred cCCCCcEEEEeccc--CceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccccc
Confidence 12446788888763 32322221000 000 00000012245678898887776544 456899999887763
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.6e-09 Score=104.14 Aligned_cols=112 Identities=12% Similarity=-0.020 Sum_probs=80.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|+||++||..+.. ...|.. ....|+++ ||.|+.+|+||.|...... .. ..-....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~--~~--~~~~~~~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ--AV--QNIRIVGAETAYLIQQLLTELS 142 (452)
T ss_dssp TTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH--HH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccccHH--HH--HhHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999987654 233544 34566665 9999999999887654211 10 0011334677788888875433
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.+++.++|||+||.+++.++.++|++++.++...|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 456899999999999999999999999999999887653
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=97.37 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCcCCC----CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc
Q 010654 261 GSDPLLLYGYGSYEICND----PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
++.|.||++||..+.... ..|......|.++||.|+.+|+||.|..... ....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~----------~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP----------NGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST----------TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----------CCCHHHHHHHHHHHHHH
Confidence 456789999997654421 3466677899999999999999988764211 13345555555555443
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.+.+++.++|||+||.++..++.++|++++++|..++.
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 13468999999999999999999999999999988764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.85 E-value=5e-08 Score=104.51 Aligned_cols=193 Identities=10% Similarity=0.007 Sum_probs=116.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecC-CceEE---EEEEeCCCcEEEEEeccc------cceEEEEEeCCCCCceeeeecccc
Q 010654 8 DKAWLHKLEADQSNDICLYHEKD-DIYSL---GLQASESKKFLFIASESK------ITRFVFYLDVSKPEELRVLTPRVV 77 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~-~~~~~---~~~~SpDg~~i~~~~~~~------~~~~l~~~d~~~~~~~~~l~~~~~ 77 (505)
..|++|++.|++ ...++.... ..+.+ ++.|||||++|++..+.. ...++|++|+++++ .++|+....
T Consensus 36 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-~~~l~~~~~ 112 (740)
T 4a5s_A 36 NNILVFNAEYGN--SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPN 112 (740)
T ss_dssp TEEEEEETTTCC--EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCT
T ss_pred CcEEEEECCCCc--eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-EEEcccCCC
Confidence 368999998863 345555332 22221 368999999999987642 24789999999996 777775443
Q ss_pred ceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC--cee----------------eEEEEeCC--E
Q 010654 78 GVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES--VKL----------------QDIQLFID--H 136 (505)
Q Consensus 78 ~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~i----------------~~~~~~~d--~ 136 (505)
.... .|||||++|+|.++ ..||+.++.+ +... .++.+.. ..+ ..+.|++| .
T Consensus 113 ~~~~~~~SPdG~~la~~~~------~~i~~~~~~~-~~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~ 184 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYVWN------NDIYVKIEPN-LPSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF 184 (740)
T ss_dssp TEEEEEECSSTTCEEEEET------TEEEEESSTT-SCCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE
T ss_pred cceeeEECCCCCEEEEEEC------CeEEEEECCC-CceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCE
Confidence 3333 49999999999964 2799999876 4333 3443221 111 24778887 4
Q ss_pred EEEEEecCC---------------------------------eeEEEEEEcCC---CCC-cccccCCCceeeccCCeeee
Q 010654 137 LAVYEREGG---------------------------------LQKITTYRLPA---VGE-PLKSLQGGKSVEFIDPVYSI 179 (505)
Q Consensus 137 l~~~~~~~~---------------------------------~~~l~~~~~~~---~~~-~~~~l~~~~~~~~~~~~~~~ 179 (505)
|++....++ ..+++++++++ ... ....|.... .+......+
T Consensus 185 la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 262 (740)
T 4a5s_A 185 LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA--SMLIGDHYL 262 (740)
T ss_dssp EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH--HHHTSCEEE
T ss_pred EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc--cCCCCCeEE
Confidence 666543322 22566677653 110 111111000 000011223
Q ss_pred cCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+++++|++.+++...+...-..|+++++.+++
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3456889988777776666666689999988775
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.8e-07 Score=98.65 Aligned_cols=184 Identities=11% Similarity=0.044 Sum_probs=115.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCC-----------------------ceEEEEEEeCCCcEEEEEeccccceEEEEEeCC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDD-----------------------IYSLGLQASESKKFLFIASESKITRFVFYLDVS 64 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~-----------------------~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~ 64 (505)
..||+|++.++ +.+.++..... .....++|||||++|++... ..||++|++
T Consensus 64 ~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~ 137 (741)
T 2ecf_A 64 LDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK 137 (741)
T ss_dssp EEEEEEETTTC--CEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET----TEEEEEESS
T ss_pred cEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC
Confidence 47999999875 34445532211 11236789999999998876 689999999
Q ss_pred CC---Cceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCce--------------
Q 010654 65 KP---EELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVK-------------- 126 (505)
Q Consensus 65 ~~---~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------- 126 (505)
++ . .+.++....... ..|||||++|++.++. .|+++|+++ +... .++......
T Consensus 138 ~~~~~~-~~~l~~~~~~~~~~~~SPDG~~la~~~~~------~i~~~d~~~-g~~~-~~~~~~~~~~~~g~~~~v~~~~~ 208 (741)
T 2ecf_A 138 QEGKAA-VRQLTHGEGFATDAKLSPKGGFVSFIRGR------NLWVIDLAS-GRQM-QLTADGSTTIGNGIAEFVADEEM 208 (741)
T ss_dssp SCSTTS-CCBCCCSSSCEEEEEECTTSSEEEEEETT------EEEEEETTT-TEEE-ECCCCCCSSEEESCCCHHHHHHS
T ss_pred CCCcce-EEEcccCCcccccccCCCCCCEEEEEeCC------cEEEEecCC-CCEE-EeccCCccceeccccceeeeecc
Confidence 98 6 666665433333 3499999999998742 799999876 4333 333222211
Q ss_pred --eeEEEEeCC--EEEEEEecC------------------------------CeeEEEEEEcCCCCCcccccCCCceeec
Q 010654 127 --LQDIQLFID--HLAVYEREG------------------------------GLQKITTYRLPAVGEPLKSLQGGKSVEF 172 (505)
Q Consensus 127 --i~~~~~~~d--~l~~~~~~~------------------------------~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 172 (505)
+..+.|++| .|++....+ ...+++++++.+. +....+ ..
T Consensus 209 ~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~-~~~~~~------~~ 281 (741)
T 2ecf_A 209 DRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ-AQTQWI------DL 281 (741)
T ss_dssp CCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT-CCCEEE------CC
T ss_pred ccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC-CceEEe------cC
Confidence 356889887 466654433 2236777776520 322222 11
Q ss_pred c-CCeeeecCCCCcccCCEEEEEEec-CCCCceEEEEECCCCcE
Q 010654 173 I-DPVYSIDPSESVFSSRILRFHYSS-LRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 173 ~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~ 214 (505)
. .....+..+.+ +|++.+++.... ...-..|+++++.+++.
T Consensus 282 ~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 282 GKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp CSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 1 11112334678 999988887763 44456899999988873
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3.2e-07 Score=97.73 Aligned_cols=193 Identities=11% Similarity=0.064 Sum_probs=116.0
Q ss_pred ceEEEEECCCCCCCCeEEEEec----CCce-EEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccc-e
Q 010654 8 DKAWLHKLEADQSNDICLYHEK----DDIY-SLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVG-V 79 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~----~~~~-~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~-~ 79 (505)
..||+.+..++ +.+.++... +..+ ..+++|||||++|+|..... ....||++|+++++ ...++..... .
T Consensus 98 ~~l~~~~~~~~--~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-~~~~~~~~~~~~ 174 (710)
T 2xdw_A 98 RVLYVQDSLEG--EARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-ELPDVLERVKFS 174 (710)
T ss_dssp CEEEEESSTTS--CCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-EEEEEEEEECSC
T ss_pred EEEEEEcCCCC--CcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-CCcccccCcccc
Confidence 46788887543 344555321 1223 34789999999999987654 34599999999986 5544322211 2
Q ss_pred eEEeeeeCCEEEEEEcCCC-----------CCCceEEEeeCCCCCCceEEE-cCCC-CceeeEEEEeCC--EEEEEEecC
Q 010654 80 DTAASHRGNHFFITRRSDE-----------LFNSELLACPVDNTSETTVLI-PHRE-SVKLQDIQLFID--HLAVYEREG 144 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~-----------~~~~~l~~~~~~~~~~~~~~~-~~~~-~~~i~~~~~~~d--~l~~~~~~~ 144 (505)
...|||||+.|+|.+.... ....+|++.++.+......++ .... ......+.|++| .|++.....
T Consensus 175 ~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 254 (710)
T 2xdw_A 175 CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG 254 (710)
T ss_dssp CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS
T ss_pred eEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc
Confidence 3459999999999987532 113579999997622222233 3322 223557888887 455555433
Q ss_pred C--eeEEEEEEcCCC-----CC-cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 145 G--LQKITTYRLPAV-----GE-PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 145 ~--~~~l~~~~~~~~-----~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
. ..+++++++... +. ..+.|.. .... .. ..++++++.++|..+....-..|+++++.++
T Consensus 255 ~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~------~~~~-~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 255 CDPVNRLWYCDLQQESNGITGILKWVKLID------NFEG-EY--DYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp SSSCCEEEEEEGGGSSSSSCSSCCCEEEEC------SSSS-CE--EEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCCccEEEEEECcccccccCCccceEEeeC------CCCc-EE--EEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 2 568899988631 11 2222221 1110 11 1256788888887665433457999998765
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=3e-08 Score=92.96 Aligned_cols=118 Identities=12% Similarity=-0.015 Sum_probs=82.1
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
.+...++.|.. .+.+..+.||++||..+... ..|. .....|.++||.|+.+|++|+|.... ....
T Consensus 49 ~L~~~i~~p~~--~~~~~~~pVVLvHG~~~~~~-~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~-----------~~~~ 114 (316)
T 3icv_A 49 VLDAGLTCQGA--SPSSVSKPILLVPGTGTTGP-QSFDSNWIPLSAQLGYTPCWISPPPFMLNDT-----------QVNT 114 (316)
T ss_dssp HHHHTEEETTB--BTTBCSSEEEEECCTTCCHH-HHHTTTHHHHHHHTTCEEEEECCTTTTCSCH-----------HHHH
T ss_pred hHhhhEeCCCC--CCCCCCCeEEEECCCCCCcH-HHHHHHHHHHHHHCCCeEEEecCCCCCCCcH-----------HHHH
Confidence 34444566633 23345677999999765321 2244 45678889999999999998763211 1235
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC---CCceeEEEecCCchh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR---PDLFKAAVAAVPFVD 378 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~~d 378 (505)
+++.+.++.+.+.-. .+++.|+||||||.++.+++..+ +++++.+|..+|...
T Consensus 115 ~~la~~I~~l~~~~g--~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 115 EYMVNAITTLYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHhC--CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 677778888776532 26899999999999998877764 589999999888643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-07 Score=100.92 Aligned_cols=193 Identities=11% Similarity=0.092 Sum_probs=116.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCc--eEEEEEEeCCCcEEEEEecccc------ceEEEEEeCCCCCceeeeeccccc-
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDI--YSLGLQASESKKFLFIASESKI------TRFVFYLDVSKPEELRVLTPRVVG- 78 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~--~~~~~~~SpDg~~i~~~~~~~~------~~~l~~~d~~~~~~~~~l~~~~~~- 78 (505)
..|++|++.+++ ...++...... ...+++|||||++|++...... ...+|++|+++++ .+.++.....
T Consensus 37 g~i~~~d~~~g~--~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~l~~~~~~~ 113 (723)
T 1xfd_A 37 GTVRLWNVETNT--STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD-PQSLDPPEVSN 113 (723)
T ss_dssp SCEEEBCGGGCC--CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC-CEECCCTTCCS
T ss_pred CCEEEEECCCCc--EEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc-eEeccCCcccc
Confidence 369999998763 34455432210 1347889999999999865432 3789999999986 6666543321
Q ss_pred --e-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC-c----------------eeeEEEEeCC--E
Q 010654 79 --V-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-V----------------KLQDIQLFID--H 136 (505)
Q Consensus 79 --~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~----------------~i~~~~~~~d--~ 136 (505)
. ...|||||++|+|.++ ..|+++++++ +....+...... . ....+.|++| .
T Consensus 114 ~~~~~~~~SPdG~~la~~~~------~~i~~~~~~~-g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~ 186 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFE------NNIYYCAHVG-KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR 186 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEET------TEEEEESSSS-SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE
T ss_pred ccccccEECCCCCEEEEEEC------CeEEEEECCC-CceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE
Confidence 2 2349999999999985 2799999886 444323322111 1 1257889887 4
Q ss_pred EEEEEecC-------------------------------CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCc
Q 010654 137 LAVYEREG-------------------------------GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 185 (505)
Q Consensus 137 l~~~~~~~-------------------------------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (505)
|++....+ ....++++++.. +.....|..... +......+..+.++
T Consensus 187 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 187 LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-PTHDLEMMPPDD--PRMREYYITMVKWA 263 (723)
T ss_dssp EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-SCCCEECCCCCC--GGGSSEEEEEEEES
T ss_pred EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-CceeEEeeCCcc--CCCccceeEEEEEe
Confidence 55554332 133678888763 221222221100 00001123335678
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 186 FSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 186 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+|++.+++.......-..++++++.+++
T Consensus 264 pDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 264 TSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp SSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred CCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 9988665555544455689999998877
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=2.2e-07 Score=98.93 Aligned_cols=192 Identities=11% Similarity=0.124 Sum_probs=117.0
Q ss_pred CceEEEEECCC-----CCCCCeEEEEecCCce-------------EEEEEEeCCCcEEEEEecc----------------
Q 010654 7 PDKAWLHKLEA-----DQSNDICLYHEKDDIY-------------SLGLQASESKKFLFIASES---------------- 52 (505)
Q Consensus 7 ~~~l~~~~lgt-----~~~~~~~~~~~~~~~~-------------~~~~~~SpDg~~i~~~~~~---------------- 52 (505)
...||+|++.+ ++ .+.++....... ...+.|||||++|++....
T Consensus 140 ~~~i~v~~~~~~~~~~g~--~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 140 NHNLYIARGGKLGEGMSR--AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp TTEEEEEECBCTTSCCCC--CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSS
T ss_pred CCeEEEEecCcccccCCC--cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCC
Confidence 35799999977 53 333333222211 2467899999999988621
Q ss_pred --------------ccceEEEEEeCCCCCceeeeecc---ccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC-
Q 010654 53 --------------KITRFVFYLDVSKPEELRVLTPR---VVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTS- 113 (505)
Q Consensus 53 --------------~~~~~l~~~d~~~~~~~~~l~~~---~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~- 113 (505)
.....|+++|+++++ .+.+... .... ...|||||++|++.+.........|+++|+++ +
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~-g~ 295 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGK-TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET-GR 295 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTE-EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT-CC
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCc-eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC-Cc
Confidence 134689999999886 5555422 1112 23499999999997654333456899999886 4
Q ss_pred CceEEEcCCCCc---eeeEEEEeC--C-EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC-CCCcc
Q 010654 114 ETTVLIPHRESV---KLQDIQLFI--D-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP-SESVF 186 (505)
Q Consensus 114 ~~~~~~~~~~~~---~i~~~~~~~--d-~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 186 (505)
....+....... .+..+.|++ | .+++....++..+++.++.+ ++.++.|+.+ .+.+.. +.+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~--~~~~~~l~~~--------~~~v~~~~~~sp 365 (706)
T 2z3z_A 296 FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT--GRLIRQVTKG--------EWEVTNFAGFDP 365 (706)
T ss_dssp EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT--SCEEEECCCS--------SSCEEEEEEECT
T ss_pred eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC--CCEEEecCCC--------CeEEEeeeEEcC
Confidence 333233222111 134567887 6 55556667777777777743 4434333321 111211 35678
Q ss_pred cCCEEEEEEecCCCC--ceEEEEECCCCc
Q 010654 187 SSRILRFHYSSLRTP--PSVYDYDMDMGI 213 (505)
Q Consensus 187 ~~~~~~~~~~~~~~p--~~~~~~~~~~~~ 213 (505)
+++.+++..+. ..| ..+|.++..+++
T Consensus 366 dg~~l~~~~~~-~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 366 KGTRLYFESTE-ASPLERHFYCIDIKGGK 393 (706)
T ss_dssp TSSEEEEEESS-SCTTCBEEEEEETTCCC
T ss_pred CCCEEEEEecC-CCCceEEEEEEEcCCCC
Confidence 88888777655 333 489999987765
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.4e-06 Score=80.96 Aligned_cols=175 Identities=9% Similarity=-0.025 Sum_probs=109.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s 84 (505)
...+||.+++.++. ...+... . ....+.|||||++|++.........||.+++.++. .+.+........ ..|+
T Consensus 108 ~~~~l~~~~~~~~~--~~~~~~~-~--~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s 181 (297)
T 2ojh_A 108 GKSAIYLLPSTGGT--PRLMTKN-L--PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYS 181 (297)
T ss_dssp SSCEEEEEETTCCC--CEECCSS-S--SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEEC
T ss_pred CcceEEEEECCCCc--eEEeecC-C--CccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceEC
Confidence 45679999986642 3333322 2 24467899999999987766556789999998886 666665443332 4599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecC--------CeeEEEEEEc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREG--------GLQKITTYRL 154 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~--------~~~~l~~~~~ 154 (505)
|||+.|++.+..++ ..+|+.+++.+ +... .+.... ..+..+.|+++ .+++..... +..+++++++
T Consensus 182 ~dg~~l~~~~~~~~--~~~i~~~~~~~-~~~~-~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 182 PDGRWIYFNSSRTG--QMQIWRVRVDG-SSVE-RITDSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp TTSSEEEEEECTTS--SCEEEEEETTS-SCEE-ECCCCS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CCCCEEEEEecCCC--CccEEEECCCC-CCcE-EEecCC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 99999999886433 46899998765 3333 343332 34667888876 455555543 3467889987
Q ss_pred CCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecC
Q 010654 155 PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL 198 (505)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (505)
.. +....+ ..++.....+..+.++++++.+++.....
T Consensus 257 ~~--~~~~~~-----~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 257 DG--GNVETL-----FDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TS--CSCEEE-----EEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CC--CCceee-----eccCCCCcccccceECCCCCEEEEEEecc
Confidence 63 222211 11111111234467888999887776543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.4e-07 Score=101.06 Aligned_cols=178 Identities=13% Similarity=0.093 Sum_probs=112.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc---ccceEEEEEeCCCCCceeeeeccccce-----
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES---KITRFVFYLDVSKPEELRVLTPRVVGV----- 79 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~----- 79 (505)
..||+|++.++ +.+.+.. .+.....++|||||++|++.+.. .....||++|++++. .++|+......
T Consensus 33 ~~l~~~~~~gg--~~~~lt~--~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~ 107 (1045)
T 1k32_A 33 DDLWEHDLKSG--STRKIVS--NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRM 107 (1045)
T ss_dssp TEEEEEETTTC--CEEEEEC--SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEE
T ss_pred CcEEEEECCCC--cEEEeee--CCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCccccccc
Confidence 47999999764 3455543 34456689999999999998765 456799999999986 88887655333
Q ss_pred ---eEEeeeeCCEEEEEEcCCCC--CCceEEEeeCCCCCCceEEEcCC--------------------------------
Q 010654 80 ---DTAASHRGNHFFITRRSDEL--FNSELLACPVDNTSETTVLIPHR-------------------------------- 122 (505)
Q Consensus 80 ---~~~~s~dg~~l~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~-------------------------------- 122 (505)
...|||||+ ++|.+..+.. ...+|+.+++++ +... .++..
T Consensus 108 ~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~-g~~~-~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~ 184 (1045)
T 1k32_A 108 FTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDG-INFV-PLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTR 184 (1045)
T ss_dssp CSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGG-TEEE-ECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTC
T ss_pred ccccccCCCCCE-EEEEECCcCCCcccceEEEEECCC-CCeE-EecCCCcceeeeCCCEEEEeccCCCccccccccCCCc
Confidence 245999998 7777764311 235788888764 2211 11100
Q ss_pred -----------------CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCc
Q 010654 123 -----------------ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 185 (505)
Q Consensus 123 -----------------~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (505)
....+..+.|+++.+++....++..+++.++.+ +...+.++... .+....++
T Consensus 185 ~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~--g~~~~~l~~~~---------~~~~~~~S 253 (1045)
T 1k32_A 185 GKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLD--GKDLRKHTSFT---------DYYPRHLN 253 (1045)
T ss_dssp CEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETT--SCSCEECCCCC---------SSCEEEEE
T ss_pred CCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCC--CCcceEecCCC---------CcceeeEc
Confidence 112244567888888888877777777776654 43333332111 01113467
Q ss_pred ccCCEEEEEEecCCCCceEEEEEC
Q 010654 186 FSSRILRFHYSSLRTPPSVYDYDM 209 (505)
Q Consensus 186 ~~~~~~~~~~~~~~~p~~~~~~~~ 209 (505)
+|++.+++.. ...++++++
T Consensus 254 pDG~~la~~~-----~~~i~~~d~ 272 (1045)
T 1k32_A 254 TDGRRILFSK-----GGSIYIFNP 272 (1045)
T ss_dssp ESSSCEEEEE-----TTEEEEECT
T ss_pred CCCCEEEEEe-----CCEEEEecC
Confidence 8888777753 346666665
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=98.71 E-value=3.5e-08 Score=94.33 Aligned_cols=109 Identities=13% Similarity=0.061 Sum_probs=79.0
Q ss_pred CcEEEEEcCCCCcC--------CCCCC----chhHHHHHHCCcE---EEEEcccCCCCCchhHHHcccccCCcchHHHHH
Q 010654 263 DPLLLYGYGSYEIC--------NDPAF----NSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFI 327 (505)
Q Consensus 263 ~P~iv~~hGg~~~~--------~~~~~----~~~~~~l~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~ 327 (505)
.+.||++||..+.. ....| ......|.++||. |+.+|+||.+...... ........++++.
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~----~~~~~~~~~~~l~ 115 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQ----YNYHSSTKYAIIK 115 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGG----GCCBCHHHHHHHH
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcc----ccCCHHHHHHHHH
Confidence 34588899976632 22345 6667889999998 9999999876421100 0112234578888
Q ss_pred HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCch
Q 010654 328 ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFV 377 (505)
Q Consensus 328 ~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 377 (505)
+.++.+.++. ..+++.|+||||||.++..++.++ |++++.+|..+|..
T Consensus 116 ~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 116 TFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 8888877652 236899999999999999999987 89999999887754
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-08 Score=99.31 Aligned_cols=111 Identities=9% Similarity=-0.014 Sum_probs=76.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHH-HHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSL-LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l-~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|+||++||..+.. ...|.. ....| ...+|.|+++|+||+|.... ..+. ..-....+++.+.+++|.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y--~~~~--~~~~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTAY--SQAS--QNVRIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCH--HHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCcc--HHHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999976543 223543 33444 45799999999998775431 1100 0001223566677777764433
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++.+++.++|||+||.+++.++.++|++++.++...|.
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 46789999999999999999999999999998877664
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.2e-06 Score=92.98 Aligned_cols=191 Identities=12% Similarity=0.066 Sum_probs=112.7
Q ss_pred CceEEEEECCCCCCCCeEEEEec----CCce-EEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCcee---eeeccc
Q 010654 7 PDKAWLHKLEADQSNDICLYHEK----DDIY-SLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELR---VLTPRV 76 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~----~~~~-~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~---~l~~~~ 76 (505)
...||+.+..++ +.+.++..+ +..+ ..+++|||||++|+|..... +...|+++|+++++ .. .+....
T Consensus 93 ~~~l~~~~~~~~--~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~-~~~~~~~~~~~ 169 (695)
T 2bkl_A 93 KAILYWRQGESG--QEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE-WSKVDVIEGGK 169 (695)
T ss_dssp SCEEEEEESTTS--CCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC-BCSSCCBSCCT
T ss_pred EEEEEEEcCCCC--CcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC-CcCCcccCccc
Confidence 456899887543 345555421 1223 34789999999999997644 35799999999986 43 222111
Q ss_pred cceeEEeeeeCCEEEEEEcCCC--------CCCceEEEeeCCCCCCceEEEcCCC--CceeeEEEEeCC--EEEEEEecC
Q 010654 77 VGVDTAASHRGNHFFITRRSDE--------LFNSELLACPVDNTSETTVLIPHRE--SVKLQDIQLFID--HLAVYEREG 144 (505)
Q Consensus 77 ~~~~~~~s~dg~~l~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~d--~l~~~~~~~ 144 (505)
.....|||||+.|+|.+.... ....+|++.++.+......++.... ...+..+.|++| .+++.....
T Consensus 170 -~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 170 -YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp -TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred -ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 123459999999999987532 1246799999976222222333322 124567888887 466666555
Q ss_pred -CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 145 -GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 145 -~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+..++++++.+ ++..+.|.. .... ... . ..++++ +++..+.......|+++++.++.
T Consensus 249 ~~~~~l~~~~~~--~~~~~~l~~------~~~~-~~~-~-~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 249 WSENDVYWKRPG--EKDFRLLVK------GVGA-KYE-V-HAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TTEEEEEEECTT--CSSCEEEEE------CSSC-CEE-E-EEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCceEEEEEcCC--CCceEEeec------CCCc-eEE-E-EecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 56788888643 232332221 1110 111 1 124566 66654432234578999886654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.5e-06 Score=92.22 Aligned_cols=168 Identities=12% Similarity=0.010 Sum_probs=104.4
Q ss_pred EEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeecccc-ceeEEeeeeCCEEEEEEcCCC--------CCCce
Q 010654 35 LGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDE--------LFNSE 103 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~--------~~~~~ 103 (505)
.+++|||||++|+|..... +...||++|+++++ .....-... .....|| ||+.|+|.+..+. ....+
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~-~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ-PLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS-EEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC-CCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 3689999999999987654 45899999999997 444321111 1224599 9999999997632 23468
Q ss_pred EEEeeCCCCCCceEEEcCCCC---ceeeEEEEeCC--EEEEEEecCCe-eEEEEEEcCCCCCcccccCCCceeeccCCee
Q 010654 104 LLACPVDNTSETTVLIPHRES---VKLQDIQLFID--HLAVYEREGGL-QKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~d--~l~~~~~~~~~-~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
||+.++.+......++....+ ....++.|++| .+++....... .++++++++......++|+. +...
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~------~~~~- 282 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG------DLDA- 282 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC------SSSS-
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC------CCCc-
Confidence 999998763333334443333 22456778887 45555554433 48899988642222332221 1110
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
... .++++++.++|..+.......|+.+++.++.
T Consensus 283 ~~~--~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 283 DVS--LVDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp CEE--EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred eEE--EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 011 1456788888877654444689999987654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.65 E-value=3.4e-06 Score=90.19 Aligned_cols=164 Identities=6% Similarity=0.023 Sum_probs=100.7
Q ss_pred EEEEEe-CCCcEEEEEeccc--cceEEEEEeCCCC-Cc-eeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 35 LGLQAS-ESKKFLFIASESK--ITRFVFYLDVSKP-EE-LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 35 ~~~~~S-pDg~~i~~~~~~~--~~~~l~~~d~~~~-~~-~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
..++|| |||++|+|..... ....||++|++++ +. ...+... .....|||||++|+|.+........+||+.++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~--~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT--NGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE--CSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCc--eeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 478999 9999999997654 3467999999998 51 1112111 11245999999999998653222258999999
Q ss_pred CCCCCceE-EEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc--cccCCCceeeccCCeeeecCCCC
Q 010654 110 DNTSETTV-LIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL--KSLQGGKSVEFIDPVYSIDPSES 184 (505)
Q Consensus 110 ~~~~~~~~-~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~ 184 (505)
.+...... ++..........+.|++| .|++........++++++++...... +.|..+. ....+
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-----------~~~~~ 323 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-----------KGVRY 323 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-----------TTCCE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-----------CCceE
Confidence 76222222 333222223457788886 57777766667889999886421222 3332110 01122
Q ss_pred ccc---CCEEEEEEecC-CCCceEEEEECCC
Q 010654 185 VFS---SRILRFHYSSL-RTPPSVYDYDMDM 211 (505)
Q Consensus 185 ~~~---~~~~~~~~~~~-~~p~~~~~~~~~~ 211 (505)
+++ ++.++|..+.. ..-..|+.+++.+
T Consensus 324 s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 324 DVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 333 77777776654 3345888888764
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.65 E-value=3.6e-08 Score=97.88 Aligned_cols=110 Identities=9% Similarity=0.068 Sum_probs=74.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|+||++||..+.. ...|.. ....|++ .+|.|+++|+||++... +..+. ..-....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999976543 223443 2345555 48999999999865432 11110 0011234566677777764323
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++.+++.|+|||+||.+++.++.++|+ ++.++...|.
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 466899999999999999999999998 8888876654
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.64 E-value=9.6e-08 Score=94.48 Aligned_cols=112 Identities=16% Similarity=0.059 Sum_probs=74.7
Q ss_pred CcEEEEEcCCCCcCCCCC-CchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcc--ccc----CCcchHHHHHHHHHHHH
Q 010654 263 DPLLLYGYGSYEICNDPA-FNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENG--KFL----KKKNTFTDFIACAEYLI 334 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~-~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~--~~~----~~~~~~~D~~~~~~~l~ 334 (505)
.| ||++|||.+...... .......+++ .|+.|+.+|.||+|.+...-.... ... .....++|+...++++.
T Consensus 39 ~P-i~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~ 117 (446)
T 3n2z_B 39 GS-ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLK 117 (446)
T ss_dssp CE-EEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred CC-EEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHH
Confidence 46 556688876432100 0112345665 489999999999997642110000 011 12356789888888887
Q ss_pred HcC-CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 335 KNC-YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 335 ~~~-~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
..- .....++.++||||||.++++++.++|+++.++|+.++
T Consensus 118 ~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 118 RTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 651 22335899999999999999999999999999988654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.64 E-value=2.4e-06 Score=91.46 Aligned_cols=193 Identities=11% Similarity=0.041 Sum_probs=114.4
Q ss_pred CceEEEEECC---CCCCCCeEEEEec----CCce-EEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccc
Q 010654 7 PDKAWLHKLE---ADQSNDICLYHEK----DDIY-SLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRV 76 (505)
Q Consensus 7 ~~~l~~~~lg---t~~~~~~~~~~~~----~~~~-~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~ 76 (505)
...||+.+.. ++ +.+.+++.+ +..+ ..+++|||||++|+|..... +...||++|+++++ ........
T Consensus 132 ~~~l~~~~~~~~~~~--~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~-~~~~~~~~ 208 (741)
T 1yr2_A 132 QSQLLVRPADAPVGT--KGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK-PLADELKW 208 (741)
T ss_dssp SCEEEEEETTSCTTC--CCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC-EEEEEEEE
T ss_pred EEEEEEEcCCccCCC--CCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-CCCccCCC
Confidence 4668988875 32 344554321 1123 34789999999999987653 34789999999997 44332111
Q ss_pred cc-eeEEeeeeCCEEEEEEcCCCC---------CCceEEEeeCCCCCCceEEEcCCCC--ceeeEEEEeCCE--EEEEEe
Q 010654 77 VG-VDTAASHRGNHFFITRRSDEL---------FNSELLACPVDNTSETTVLIPHRES--VKLQDIQLFIDH--LAVYER 142 (505)
Q Consensus 77 ~~-~~~~~s~dg~~l~~~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~d~--l~~~~~ 142 (505)
.. ....|||| +.|+|.+..... ...+|++.++.+......++....+ ..+..+.|++|+ |++...
T Consensus 209 ~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 209 VKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp EESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 11 23459999 999999865321 1458999998752222234433322 235678888874 666555
Q ss_pred cC--CeeEEEEEEcCCCCCc-ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 143 EG--GLQKITTYRLPAVGEP-LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 143 ~~--~~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
.. ....+++++++..... .+.|... ... ... .++++++.+++..+.......|++++++++
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~------~~~-~~~--~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPD------LKA-QWD--FVDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECS------SSS-CEE--EEEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCC------CCc-eEE--EEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 43 4568899988642112 3222211 110 111 124688888887665444567999998764
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.2e-07 Score=89.84 Aligned_cols=185 Identities=12% Similarity=0.045 Sum_probs=109.5
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEE-------------------EEEeCCCcEEEEEe--ccccceEEEEEeCCCCC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLG-------------------LQASESKKFLFIAS--ESKITRFVFYLDVSKPE 67 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~-------------------~~~SpDg~~i~~~~--~~~~~~~l~~~d~~~~~ 67 (505)
+||++++.++ +.+.++..+. .+... +.|||||+++++.. .......||++|+++++
T Consensus 103 ~l~~~d~~~~--~~~~~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 103 NLMKVDLETL--EEQVIYTVDE-EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp EEEEEETTTC--CEEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred cEEEEECCCC--CcEEEEeccc-ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 6999999765 3455665332 23222 24566666554432 11345689999999986
Q ss_pred ceeeeeccccce-eEEeee-eCCEEEEEEcCCC-CCCceEEEeeCCCCCCceEEEcCC-CCceeeEEEEeCC--EEEEEE
Q 010654 68 ELRVLTPRVVGV-DTAASH-RGNHFFITRRSDE-LFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFID--HLAVYE 141 (505)
Q Consensus 68 ~~~~l~~~~~~~-~~~~s~-dg~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~d--~l~~~~ 141 (505)
.+.+....... ...|+| ||++|+|.++... ....+|+++++++ +... .+... ....+..+.|++| .+++..
T Consensus 180 -~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 180 -LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SNVR-KIKEHAEGESCTHEFWIPDGSAMAYVS 256 (396)
T ss_dssp -EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CCCE-ESSCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred -EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Ccee-EeeccCCCccccceEECCCCCEEEEEe
Confidence 77766443222 234999 8999999986311 1125899999876 3333 33332 2335677888876 477776
Q ss_pred ecCCeeE--EEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcc-cCCEEEEEEecCCCC--------------ceE
Q 010654 142 REGGLQK--ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVF-SSRILRFHYSSLRTP--------------PSV 204 (505)
Q Consensus 142 ~~~~~~~--l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p--------------~~~ 204 (505)
..++... ++++++.. +..+.+. .++. .. ..+++ |++.+++. ++. .| ..+
T Consensus 257 ~~~~~~~~~l~~~d~~~--g~~~~l~-----~~~~--~~---~~~s~~dg~~l~~~-~~~-~p~~~~~~~~~~~~~~~~i 322 (396)
T 3c5m_A 257 YFKGQTDRVIYKANPET--LENEEVM-----VMPP--CS---HLMSNFDGSLMVGD-GCD-APVDVADADSYNIENDPFL 322 (396)
T ss_dssp EETTTCCEEEEEECTTT--CCEEEEE-----ECCS--EE---EEEECSSSSEEEEE-ECC-C----------CCCCCCEE
T ss_pred cCCCCccceEEEEECCC--CCeEEee-----eCCC--CC---CCccCCCCceEEEe-cCC-cceeeccccccccCCCCcE
Confidence 6665544 88888763 2222211 1111 11 34567 88855543 322 33 689
Q ss_pred EEEECCCCc
Q 010654 205 YDYDMDMGI 213 (505)
Q Consensus 205 ~~~~~~~~~ 213 (505)
|++++.+++
T Consensus 323 ~~~d~~~~~ 331 (396)
T 3c5m_A 323 YVLNTKAKS 331 (396)
T ss_dssp EEEETTTTB
T ss_pred EEEecccCc
Confidence 999988776
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.2e-07 Score=96.94 Aligned_cols=188 Identities=11% Similarity=0.056 Sum_probs=109.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCC--ceEEEEEEeCCCcEEEEEeccc------cceEEEEEeCCCCCce---eeeeccc
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDD--IYSLGLQASESKKFLFIASESK------ITRFVFYLDVSKPEEL---RVLTPRV 76 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~--~~~~~~~~SpDg~~i~~~~~~~------~~~~l~~~d~~~~~~~---~~l~~~~ 76 (505)
..|++|++.+++ .+.++..... .-...++|||||++|++..... ....||++|+++++ . +.+...
T Consensus 36 ~~i~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~-~~~~~~l~~~- 111 (719)
T 1z68_A 36 NNIVLYNIETGQ--SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE-FVRGNELPRP- 111 (719)
T ss_dssp SCEEEEESSSCC--EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCSS-
T ss_pred CCEEEEEcCCCc--EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc-cccceecCcc-
Confidence 469999998753 4455543210 0133688999999999886532 24689999999986 5 555421
Q ss_pred cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC-c-----------------eeeEEEEeCC--E
Q 010654 77 VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-V-----------------KLQDIQLFID--H 136 (505)
Q Consensus 77 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-----------------~i~~~~~~~d--~ 136 (505)
.....|||||++|+|.++ ..|++.++.+ +... .++.... . ....+.|++| .
T Consensus 112 -~~~~~~SPDG~~la~~~~------~~i~~~~~~~-g~~~-~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 112 -IQYLCWSPVGSKLAYVYQ------NNIYLKQRPG-DPPF-QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp -BCCEEECSSTTCEEEEET------TEEEEESSTT-SCCE-ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred -cccceECCCCCEEEEEEC------CeEEEEeCCC-CCcE-EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE
Confidence 223459999999999863 2799999876 4333 3332211 1 1137889887 4
Q ss_pred EEEEEecC-------------------------------CeeEEEEEEcCCCCCcc---cccCCCceeeccCCeeeecCC
Q 010654 137 LAVYEREG-------------------------------GLQKITTYRLPAVGEPL---KSLQGGKSVEFIDPVYSIDPS 182 (505)
Q Consensus 137 l~~~~~~~-------------------------------~~~~l~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~ 182 (505)
|++....+ ....++++++.. +.. ..+.. ...+......+..+
T Consensus 183 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 183 LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY--PAYVGPQEVPV--PAMIASSDYYFSWL 258 (719)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC--HHHHCCEECCC--CHHHHTSCEEEEEE
T ss_pred EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC--CCccceeEccC--CccCCCCcceEEEe
Confidence 66655442 223677887763 211 01110 00111112223345
Q ss_pred CCcccCCEEEEEEec-CCCCceEEEEE----CCCCc
Q 010654 183 ESVFSSRILRFHYSS-LRTPPSVYDYD----MDMGI 213 (505)
Q Consensus 183 ~~~~~~~~~~~~~~~-~~~p~~~~~~~----~~~~~ 213 (505)
.+++|+ .++++..+ ...-..|++++ ..+++
T Consensus 259 ~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 259 TWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp EESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred EEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 678885 56665443 33335788998 66654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.56 E-value=8.6e-07 Score=92.06 Aligned_cols=139 Identities=7% Similarity=-0.008 Sum_probs=89.4
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASH 85 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~ 85 (505)
+..+||.+++... .....+... +... ...|||||+.+++.+...+...|| |+++++ .+.++.... ....|||
T Consensus 88 ~~~~l~~~~~~~~-g~~~~l~~~--~~~~-~~~~s~dg~~~~~~s~~~~~~~l~--d~~~g~-~~~l~~~~~-~~~~~sp 159 (582)
T 3o4h_A 88 EQHALFKVNTSRP-GEEQRLEAV--KPMR-ILSGVDTGEAVVFTGATEDRVALY--ALDGGG-LRELARLPG-FGFVSDI 159 (582)
T ss_dssp CCEEEEEEETTST-TCCEECTTS--CSBE-EEEEEECSSCEEEEEECSSCEEEE--EEETTE-EEEEEEESS-CEEEEEE
T ss_pred cceEEEEEeccCC-CccccccCC--CCce-eeeeCCCCCeEEEEecCCCCceEE--EccCCc-EEEeecCCC-ceEEECC
Confidence 3457888887211 112233221 1222 458999999888876665554444 888886 777775543 4455999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
||++|++.+...+ ....|+++|+++ +..+ .++.... .+..+.|++|+ .++....++..+++++++++
T Consensus 160 DG~~la~~~~~~~-~~~~i~~~d~~~-g~~~-~l~~~~~-~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 160 RGDLIAGLGFFGG-GRVSLFTSNLSS-GGLR-VFDSGEG-SFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp ETTEEEEEEEEET-TEEEEEEEETTT-CCCE-EECCSSC-EEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred CCCEEEEEEEcCC-CCeEEEEEcCCC-CCce-EeecCCC-ccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 9999998887532 335799999986 5555 4554444 46789999874 33345556666889998763
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=98.55 E-value=5e-08 Score=88.28 Aligned_cols=89 Identities=9% Similarity=0.063 Sum_probs=59.4
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.|+++||..+.. ..|......|. . +.|+.+|++|.+. ..+|+.+.++.+.. ..
T Consensus 17 ~~~l~~~hg~~~~~--~~~~~~~~~l~-~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~-----~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGYG--LMYQNLSSRLP-S-YKLCAFDFIEEED----------------RLDRYADLIQKLQP-----EG 71 (230)
T ss_dssp SEEEEEECCTTCCG--GGGHHHHHHCT-T-EEEEEECCCCSTT----------------HHHHHHHHHHHHCC-----SS
T ss_pred CCCEEEECCCCCch--HHHHHHHHhcC-C-CeEEEecCCCHHH----------------HHHHHHHHHHHhCC-----CC
Confidence 47899999976543 23444444554 4 9999999997542 12455555544421 25
Q ss_pred cEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPF 376 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~ 376 (505)
++.++|||+||.++..++.+.+ +.++.++...+.
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~ 108 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY 108 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence 6999999999999998887643 567777666543
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.9e-07 Score=85.34 Aligned_cols=91 Identities=12% Similarity=0.003 Sum_probs=60.8
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|.||++||..+.. ..|......|. .+|.|+.+|++|.+. ..+++.+.++.+. ..
T Consensus 21 ~~~~l~~~hg~~~~~--~~~~~~~~~l~-~~~~v~~~d~~g~~~----------------~~~~~~~~i~~~~-----~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGFG--IYFKDLALQLN-HKAAVYGFHFIEEDS----------------RIEQYVSRITEIQ-----PE 76 (244)
T ss_dssp CSSEEEEECCTTCCG--GGGHHHHHHTT-TTSEEEEECCCCSTT----------------HHHHHHHHHHHHC-----SS
T ss_pred CCCCEEEECCCCCCH--HHHHHHHHHhC-CCceEEEEcCCCHHH----------------HHHHHHHHHHHhC-----CC
Confidence 357899999976543 23444444443 689999999997421 2345554444331 12
Q ss_pred CcEEEEeeChHHHHHHHHHhhC---CCceeEEEecCCc
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMR---PDLFKAAVAAVPF 376 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~~~~ 376 (505)
.++.++|+|+||.++..++.+. ++.+..++...+.
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~ 114 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAY 114 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCC
Confidence 5799999999999999888764 5677777766554
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=8.1e-08 Score=94.95 Aligned_cols=114 Identities=11% Similarity=0.089 Sum_probs=78.9
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc---EEEEEcccCCCCC----------chh--HHH-------------
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF---IFAIAQIRGGGEL----------GRQ--WYE------------- 312 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~---~v~~~d~rG~~~~----------g~~--~~~------------- 312 (505)
.+.|.||++||..+.. ..|......|+++|| .|+.+|++|.|.. |.. ...
T Consensus 20 ~~~ppVVLlHG~g~s~--~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~ 97 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSA--GQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDK 97 (484)
T ss_dssp -CCCCEEEECCTTCCG--GGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHH
T ss_pred CCCCEEEEECCCCCCH--HHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccc
Confidence 3467899999986543 346667788999999 6999999987632 000 000
Q ss_pred ---cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCchh
Q 010654 313 ---NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVD 378 (505)
Q Consensus 313 ---~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~d 378 (505)
..........++++.+.++.++++- ..+++.++|||+||.+++.++.++| +.++++|..+|..+
T Consensus 98 v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 98 ILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0000011234677777787777652 2368999999999999999999887 48899998887654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.8e-07 Score=73.86 Aligned_cols=82 Identities=12% Similarity=0.045 Sum_probs=55.2
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++| +.... |... | +++|.|+.+|+||.|...... . . ++++.+.+..+++.- +.+
T Consensus 22 ~~~vv~~H-~~~~~----~~~~---l-~~~~~v~~~d~~G~G~s~~~~--------~-~-~~~~~~~~~~~~~~~--~~~ 80 (131)
T 2dst_A 22 GPPVLLVA-EEASR----WPEA---L-PEGYAFYLLDLPGYGRTEGPR--------M-A-PEELAHFVAGFAVMM--NLG 80 (131)
T ss_dssp SSEEEEES-SSGGG----CCSC---C-CTTSEEEEECCTTSTTCCCCC--------C-C-HHHHHHHHHHHHHHT--TCC
T ss_pred CCeEEEEc-CCHHH----HHHH---H-hCCcEEEEECCCCCCCCCCCC--------C-C-HHHHHHHHHHHHHHc--CCC
Confidence 47899999 32221 3222 4 445999999999988653211 0 1 455555554444432 346
Q ss_pred cEEEEeeChHHHHHHHHHhhCCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~ 365 (505)
++.++|+|+||.+++.++.++|.
T Consensus 81 ~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 81 APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp SCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccEEEEEChHHHHHHHHHhcCCc
Confidence 89999999999999999999885
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=9.8e-06 Score=90.22 Aligned_cols=124 Identities=8% Similarity=0.009 Sum_probs=81.3
Q ss_pred ceEE-EEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEee
Q 010654 8 DKAW-LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAAS 84 (505)
Q Consensus 8 ~~l~-~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s 84 (505)
.++| ++++.++. ...+. ........+.|||||++|++.... ..|+++|+++++ .+.+.....+ ....||
T Consensus 358 ~~l~~~~d~~~~~--~~~l~--~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~tg~-~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 358 GDFLGIYDYRTGK--AEKFE--ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLETGK-PTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEEETTTCC--EEECC--CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETTTCC-EEEEEECSSSCCCCEEEC
T ss_pred CceEEEEECCCCC--ceEec--CCccceeeeEECCCCCEEEEECCC---CeEEEEECCCCc-eEEeccCCCCCccceEEC
Confidence 4788 99987642 23333 222345578999999999876543 479999999987 6666533222 234599
Q ss_pred eeCCEEEEEEcCC-----CCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEe
Q 010654 85 HRGNHFFITRRSD-----ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYER 142 (505)
Q Consensus 85 ~dg~~l~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~ 142 (505)
|||++|++.+..+ ......|+++|+++ +... .++..... ...+.|++| .+++...
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~-g~~~-~l~~~~~~-~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG-RKIF-AATTENSH-DYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-TEEE-ECSCSSSB-EEEEEECTTSCEEEEEES
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCC-CcEE-EeeCCCcc-cCCceEcCCCCEEEEEec
Confidence 9999999887642 12346899999986 4332 45544443 456788876 4555554
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=98.50 E-value=5.2e-07 Score=84.16 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=68.9
Q ss_pred cEEEEEcCCCCcCCC-CCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 264 PLLLYGYGSYEICND-PAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 264 P~iv~~hGg~~~~~~-~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+.||++||..+.... ..|......|.+. |+.|+.+|+ |+|....... +.. ....+++...++.+......
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~~~---~~~~~~~~~~~~~l~~~~~l- 78 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVEN--SFF---LNVNSQVTTVCQILAKDPKL- 78 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHH--HHH---SCHHHHHHHHHHHHHSCGGG-
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCcccccc--ccc---cCHHHHHHHHHHHHHhhhhc-
Confidence 348999997765432 3577777788775 889999997 7775422111 000 11223334444444432211
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCc-eeEEEecCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDL-FKAAVAAVP 375 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~-~~a~v~~~~ 375 (505)
.+++.++|||+||.++..++.++|+. ++..|...+
T Consensus 79 ~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 26899999999999999999999984 888886654
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=98.40 E-value=9.1e-07 Score=84.76 Aligned_cols=101 Identities=13% Similarity=0.042 Sum_probs=66.7
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCT 340 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d 340 (505)
..|.|+++||+.+.. ..|......| ..+|.|+.+|.+|.+... .. ...++++.+. ++.+.+.. .
T Consensus 100 ~~~~l~~lhg~~~~~--~~~~~l~~~L-~~~~~v~~~d~~g~~~~~---~~-------~~~~~~~a~~~~~~i~~~~--~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGFA--WQFSVLSRYL-DPQWSIIGIQSPRPNGPM---QT-------AANLDEVCEAHLATLLEQQ--P 164 (329)
T ss_dssp SSCEEEEECCTTSCC--GGGGGGGGTS-CTTCEEEEECCCTTTSHH---HH-------CSSHHHHHHHHHHHHHHHC--S
T ss_pred CCCcEEEEeCCcccc--hHHHHHHHhc-CCCCeEEEeeCCCCCCCC---CC-------CCCHHHHHHHHHHHHHHhC--C
Confidence 357899999987653 2344433444 468999999999876421 10 1233444433 33333321 1
Q ss_pred CCcEEEEeeChHHHHHHHHHhh---CCCceeEEEecCCch
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVPFV 377 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~---~p~~~~a~v~~~~~~ 377 (505)
..++.++|||+||.++..++.+ +|+.+...+...+..
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~ 204 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWP 204 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCC
Confidence 2579999999999999999988 899998888776544
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=98.38 E-value=4.4e-07 Score=86.60 Aligned_cols=206 Identities=12% Similarity=0.104 Sum_probs=101.7
Q ss_pred EEEEEcC--CCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCCC
Q 010654 265 LLLYGYG--SYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCTK 341 (505)
Q Consensus 265 ~iv~~hG--g~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~ 341 (505)
.++++|| +.+. ...|......| ..++.|+.+|.||.+....+.. ......++++.+.+ +.+... ...
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~l~~~L-~~~~~v~~~d~~G~g~~~~~~~-----~~~~~~~~~~a~~~~~~i~~~--~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLRLSTSF-QEERDFLAVPLPGYGTGTGTGT-----ALLPADLDTALDAQARAILRA--AGD 160 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHHHHHTT-TTTCCEEEECCTTCCBC---CB-----CCEESSHHHHHHHHHHHHHHH--HTT
T ss_pred cEEEeCCCCCCCc--HHHHHHHHHhc-CCCCceEEecCCCCCCCccccc-----CCCCCCHHHHHHHHHHHHHHh--cCC
Confidence 7899997 3332 23355444444 3689999999999876310000 00112333333222 222221 112
Q ss_pred CcEEEEeeChHHHHHHHHHhhC----CCceeEEEecCCchhhh----hhccCCCCCCCcccccccCCCCCHHHHHHHHhC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMR----PDLFKAAVAAVPFVDVL----TTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSY 413 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~~~~~d~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 413 (505)
.++.++|||+||.++..++.+. ++.++.++...+..... ..+.. ..+ .......-.+........+..+
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~-~l~--~~~~~~~~~~~~~~~~~~~~~~ 237 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSR-QLG--EGLFAGELEPMSDARLLAMGRY 237 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHH-HHH--HHHHHTCSSCCCHHHHHHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHH-Hhh--HHHHHhhccccchHHHHHHHHH
Confidence 5789999999999999988775 34577777665432100 00000 000 0000000011111111111100
Q ss_pred C---hhhcccCCCCCeEEEEccCCCCCCCCCh-HHHHHHHHHhc-CCCCCeEEEEecCCCCCCC-CCChHHHHHHHHHHH
Q 010654 414 S---PVDNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLREM-KTDDNILLFKCELGAGHFS-KSGRFERLREAAFTY 487 (505)
Q Consensus 414 s---p~~~~~~~~~Pp~Li~~G~~D~~vp~~~-~~~~~~~L~~~-~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~ 487 (505)
. .......+++| +++++| .|..+++.. ...+ ... ..+++++.++ +||.. .......+ ...+.
T Consensus 238 ~~~~~~~~~~~i~~P-vl~i~g-~D~~~~~~~~~~~~----~~~~~~~~~~~~v~----g~H~~~~~e~~~~~--~~~i~ 305 (319)
T 2hfk_A 238 ARFLAGPRPGRSSAP-VLLVRA-SEPLGDWQEERGDW----RAHWDLPHTVADVP----GDHFTMMRDHAPAV--AEAVL 305 (319)
T ss_dssp HHHHHSCCCCCCCSC-EEEEEE-SSCSSCCCGGGCCC----SCCCSSCSEEEEES----SCTTHHHHTCHHHH--HHHHH
T ss_pred HHHHHhCCCCCcCCC-EEEEEc-CCCCCCccccccch----hhcCCCCCEEEEeC----CCcHHHHHHhHHHH--HHHHH
Confidence 0 00123566887 999999 999998876 3222 221 1245666665 48863 21223322 23467
Q ss_pred HHHHHhhC
Q 010654 488 TFLMRALS 495 (505)
Q Consensus 488 ~fl~~~l~ 495 (505)
+||.+...
T Consensus 306 ~~L~~~~~ 313 (319)
T 2hfk_A 306 SWLDAIEG 313 (319)
T ss_dssp HHHHHHHC
T ss_pred HHHHhcCC
Confidence 88887654
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.3e-05 Score=72.57 Aligned_cols=170 Identities=9% Similarity=0.095 Sum_probs=109.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEe-ccccceEEEEEeCCCCCceeeeeccccceeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIAS-ESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~-~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~ 85 (505)
.+.||+.++.+. +.++|... + ...++++|++|+|.. .......||++++++.. .++|+.... ..+++
T Consensus 87 ~~~Iy~i~~dg~--~~~~l~~~--~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~---~~~~~ 154 (302)
T 3s25_A 87 RNSLCRIKRNGH--GSTVLDPD--P----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL---FTCNT 154 (302)
T ss_dssp SEEEEEEETTSC--CCEEEECS--C----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC---CCSEE
T ss_pred CCeEEEEeCCCC--cceEeecC--C----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc---eEeeE
Confidence 356999998654 34455432 2 236889999999986 33467899999999876 777776532 34789
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ 165 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 165 (505)
+|++|||... + ..+|+++++++ +..+ .+..... .. .+.+.++.|+++...++ .+++..+++ |...+.|+
T Consensus 155 ~g~~iy~t~~--g--~~~Iy~~~l~g-~~~~-~l~~~~~-~~-~~~P~g~~iy~t~~~~~-~~I~~~~ld--G~~~~~Lt 223 (302)
T 3s25_A 155 SDRYFYYNNP--K--NGQLYRYDTAS-QSEA-LFYDCNC-YK-PVVLDDTNVYYMDVNRD-NAIVHVNIN--NPNPVVLT 223 (302)
T ss_dssp ETTEEEEECT--T--TCCEEEEETTT-TEEE-EEECSCE-EE-EEEEETTEEEEEEGGGT-TEEEEECSS--SCCCEECS
T ss_pred ECCEEEEEeC--C--CceEEEEECCC-CCEE-EEeCCCc-cc-eeeecCCEEEEEEcCCC-cEEEEEECC--CCCeEEEe
Confidence 9999999975 2 35899999987 4444 3433222 12 23346788888766554 567666665 54444343
Q ss_pred CCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 166 GGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
... + ..++++++.+++...... ..|+.+++.+..
T Consensus 224 ~~~----------~--~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~~ 257 (302)
T 3s25_A 224 EAN----------I--EHYNVYGSLIFYQRGGDN--PALCVVKNDGTG 257 (302)
T ss_dssp CSC----------E--EEEEEETTEEEEEECSSS--CEEEEEETTSCC
T ss_pred CCC----------c--ceEEECCCEEEEEECCCC--cEEEEEECCCCc
Confidence 211 1 125678888876544322 789999987654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.28 E-value=0.00017 Score=69.10 Aligned_cols=165 Identities=10% Similarity=0.057 Sum_probs=86.3
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec---cccc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---RVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~---~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.++|||||+ |++.........|+++|++++. .+.+.. .... ....|+|||+.|++....+ ..+.++++..
T Consensus 44 ~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~----~~v~v~~~~~ 117 (347)
T 3hfq_A 44 YLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT-AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK----GTAEVMKIAA 117 (347)
T ss_dssp CEEECTTCE-EEEEEEETTEEEEEEEEEETTE-EEEEEEEEEESCCCSEEEEETTTTEEEEEETTT----TEEEEEEECT
T ss_pred eEEEccCCe-EEEEEecCCCceEEEEEecCCc-EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC----CEEEEEEeCC
Confidence 468999999 6655543446789999998775 555443 1111 2245999999998887542 2566666542
Q ss_pred CCCceE--EEcCC--------CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 112 TSETTV--LIPHR--------ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 112 ~~~~~~--~~~~~--------~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
.+.... .+... ....+..+.|++|+-+++... +...+.+|++...+. +..+ ..+..+... ....
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~-~~~~v~~~~~~~~g~-~~~~---~~~~~~~g~-~p~~ 191 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL-GSDKVYVYNVSDAGQ-LSEQ---SVLTMEAGF-GPRH 191 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET-TTTEEEEEEECTTSC-EEEE---EEEECCTTC-CEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC-CCCEEEEEEECCCCc-EEEe---eeEEcCCCC-CCce
Confidence 233221 12211 112355688888744443333 334678888863332 2111 111111110 0112
Q ss_pred CCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.+++|++.+++.... ..--.+|.++..+++
T Consensus 192 ~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGEL-SSQIASLKYDTQTGA 222 (347)
T ss_dssp EEECTTSSEEEEEETT-TTEEEEEEEETTTTE
T ss_pred EEECCCCCEEEEEeCC-CCEEEEEEecCCCCc
Confidence 4567888866654432 222244555543455
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.26 E-value=4e-06 Score=82.47 Aligned_cols=110 Identities=12% Similarity=0.121 Sum_probs=65.6
Q ss_pred CCcEEEEEcCCCCcC------CCCCCc----hhHHHHHHCCcEEEEEcccCCCCCchhHHH------cccccCCc-----
Q 010654 262 SDPLLLYGYGSYEIC------NDPAFN----SSRLSLLDRGFIFAIAQIRGGGELGRQWYE------NGKFLKKK----- 320 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~------~~~~~~----~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~------~~~~~~~~----- 320 (505)
..|.||++||..+.. ....|. .....|.++||.|+.+|++|.|.....-.. .+....+.
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 456789999986531 123342 356788899999999999988764321100 00000000
Q ss_pred ----chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh--------------------------CCCceeEE
Q 010654 321 ----NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM--------------------------RPDLFKAA 370 (505)
Q Consensus 321 ----~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~--------------------------~p~~~~a~ 370 (505)
...+|+.+. ++. .-..+++.++||||||.++..++.. +|++++.+
T Consensus 131 ~~~~~~a~dl~~l----l~~-l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~sl 205 (431)
T 2hih_A 131 YGHERYGKTYEGV----LKD-WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSI 205 (431)
T ss_dssp HTCCSEEEEECCS----CTT-CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEE
T ss_pred CCHHHHHHHHHHH----HHH-hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEE
Confidence 000000000 011 0012689999999999999988765 68889988
Q ss_pred EecCCc
Q 010654 371 VAAVPF 376 (505)
Q Consensus 371 v~~~~~ 376 (505)
+..++.
T Consensus 206 v~i~tP 211 (431)
T 2hih_A 206 TTIATP 211 (431)
T ss_dssp EEESCC
T ss_pred EEECCC
Confidence 877653
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.26 E-value=6.8e-05 Score=70.39 Aligned_cols=148 Identities=12% Similarity=0.157 Sum_probs=101.7
Q ss_pred EeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCC---------CCCceEEEeeC
Q 010654 39 ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDE---------LFNSELLACPV 109 (505)
Q Consensus 39 ~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~---------~~~~~l~~~~~ 109 (505)
++.||.+|+|.... +.+.||.++.++.. .++|+... ...++++|++|||....++ .....||++++
T Consensus 21 ~~~~g~~iy~~n~~-d~~~ly~~~~dg~~-~~~l~~~~---~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTN-DNGRLYAMNIDGSN-IHKLSNDT---AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGG-GTTEEEEEETTSCS-CEEEEEEE---EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCC-CCceEEEEcCCCCC-CEEccCCc---eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 46899999887553 46789999999886 88887543 2458999999999987632 12578999999
Q ss_pred CCCCCceEEEcCCCCceeeEEEEeCCEEEEEE-ecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccC
Q 010654 110 DNTSETTVLIPHRESVKLQDIQLFIDHLAVYE-REGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSS 188 (505)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (505)
++ +..+ ++..... ..+...++.|+++. .+.+...++..+++ |...+.|+.. . . ..+++++
T Consensus 96 dg-~~~~-~l~~~~~---~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs~~~~lt~~-------~---~--~~~~~~g 156 (302)
T 3s25_A 96 NG-HGST-VLDPDPC---IYASLIGNYIYYLHYDTQTATSLYRIRID--GEEKKKIKNH-------Y---L--FTCNTSD 156 (302)
T ss_dssp TS-CCCE-EEECSCE---EEEEEETTEEEEEEESSSSCEEEEEEETT--SCCCEEEESS-------C---C--CCSEEET
T ss_pred CC-Ccce-EeecCCc---cEEEEeCCEEEEEeecCCCCceEEEEECC--CCCeEEEeCC-------C---c--eEeeEEC
Confidence 87 4333 5664432 25677888999886 34566677777765 4433333211 0 1 2357889
Q ss_pred CEEEEEEecCCCCceEEEEECCCCc
Q 010654 189 RILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 189 ~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.++|+-. .-++|+++++.++.
T Consensus 157 ~~iy~t~~---g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 157 RYFYYNNP---KNGQLYRYDTASQS 178 (302)
T ss_dssp TEEEEECT---TTCCEEEEETTTTE
T ss_pred CEEEEEeC---CCceEEEEECCCCC
Confidence 98887744 45689999987765
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.25 E-value=0.00015 Score=70.63 Aligned_cols=178 Identities=11% Similarity=0.065 Sum_probs=107.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
...|++|++.++ +....+... .....+.|||||++|++.... ...|+++|+.+++ ........... ...|+|
T Consensus 11 d~~v~v~d~~~~--~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~-~~~~~~~~~~v~~~~~sp 83 (391)
T 1l0q_A 11 SDNISVIDVTSN--KVTATIPVG--SNPMGAVISPDGTKVYVANAH--SNDVSIIDTATNN-VIATVPAGSSPQGVAVSP 83 (391)
T ss_dssp TTEEEEEETTTT--EEEEEEECS--SSEEEEEECTTSSEEEEEEGG--GTEEEEEETTTTE-EEEEEECSSSEEEEEECT
T ss_pred CCEEEEEECCCC--eEEEEeecC--CCcceEEECCCCCEEEEECCC--CCeEEEEECCCCe-EEEEEECCCCccceEECC
Confidence 457999999765 233333322 234578899999998776532 3579999998886 43333222222 234999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||+.|++....+ ..|+++|+.+ +.....+.... .+..+.|+++ .+++....++ .+.+|++.. +....
T Consensus 84 dg~~l~~~~~~~----~~v~v~d~~~-~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~--~v~~~d~~~-~~~~~- 152 (391)
T 1l0q_A 84 DGKQVYVTNMAS----STLSVIDTTS-NTVAGTVKTGK--SPLGLALSPDGKKLYVTNNGDK--TVSVINTVT-KAVIN- 152 (391)
T ss_dssp TSSEEEEEETTT----TEEEEEETTT-TEEEEEEECSS--SEEEEEECTTSSEEEEEETTTT--EEEEEETTT-TEEEE-
T ss_pred CCCEEEEEECCC----CEEEEEECCC-CeEEEEEeCCC--CcceEEECCCCCEEEEEeCCCC--EEEEEECCC-CcEEE-
Confidence 999998886542 4799999886 43333444322 3678889876 4545554443 678898763 22111
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+..... +..+.++++++.+++..+. ...++++++.+++
T Consensus 153 -----~~~~~~~---~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 153 -----TVSVGRS---PKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS 191 (391)
T ss_dssp -----EEECCSS---EEEEEECTTSSEEEEEETT---TTEEEEEETTTTE
T ss_pred -----EEecCCC---cceEEECCCCCEEEEEeCC---CCEEEEEECCCCe
Confidence 1111111 1223457788877665443 2568889988775
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.0001 Score=69.92 Aligned_cols=187 Identities=5% Similarity=-0.048 Sum_probs=106.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCc-eeeeecccccee-EEee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVLTPRVVGVD-TAAS 84 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~-~~~s 84 (505)
...|.+||+.+++ ........ .... .+++||||+++++.... ...|+++|+++++. .+.+........ ..|+
T Consensus 19 ~~~v~~~d~~~~~--~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s 92 (331)
T 3u4y_A 19 LRRISFFSTDTLE--ILNQITLG-YDFV-DTAITSDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQEGQSSMADVDIT 92 (331)
T ss_dssp GTEEEEEETTTCC--EEEEEECC-CCEE-EEEECSSSCEEEEEEST--TCEEEEEECSSSSCEEEEEEECSSCCCCEEEC
T ss_pred CCeEEEEeCcccc--eeeeEEcc-CCcc-eEEEcCCCCEEEEEeCC--CCeEEEEECCCCceeEEecccCCCCccceEEC
Confidence 3478999987753 33333321 2223 78899999988766543 34899999998862 333333332233 4699
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++++ ....+ .....|.++|+++ +.....+.... ....+.|++|+ +++....++ ..+.+|+++.++...
T Consensus 93 ~dg~~l~-~~~~~-~~~~~i~v~d~~~-~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~-~~i~~~~~~~~g~~~- 165 (331)
T 3u4y_A 93 PDDQFAV-TVTGL-NHPFNMQSYSFLK-NKFISTIPIPY--DAVGIAISPNGNGLILIDRSSA-NTVRRFKIDADGVLF- 165 (331)
T ss_dssp TTSSEEE-ECCCS-SSSCEEEEEETTT-TEEEEEEECCT--TEEEEEECTTSSCEEEEEETTT-TEEEEEEECTTCCEE-
T ss_pred CCCCEEE-EecCC-CCcccEEEEECCC-CCeEEEEECCC--CccceEECCCCCEEEEEecCCC-ceEEEEEECCCCcEe-
Confidence 9999998 44332 1223899999876 33322344322 35688898874 444433323 236778876433311
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
... ...+ +... ....+.++++++.+++.... ...+.++++.+++
T Consensus 166 ~~~-~~~~--~~~~-~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 166 DTG-QEFI--SGGT-RPFNITFTPDGNFAFVANLI---GNSIGILETQNPE 209 (331)
T ss_dssp EEE-EEEE--CSSS-SEEEEEECTTSSEEEEEETT---TTEEEEEECSSTT
T ss_pred ecC-Cccc--cCCC-CccceEECCCCCEEEEEeCC---CCeEEEEECCCCc
Confidence 110 0111 1110 11224567888877666543 3568888887766
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00018 Score=70.01 Aligned_cols=180 Identities=9% Similarity=0.034 Sum_probs=107.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
...|++|++.+++ ....+.. +.....++|||||++|++.... ...|+++|+.+++ ........... ...|+|
T Consensus 53 d~~i~v~d~~~~~--~~~~~~~--~~~v~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~-~~~~~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 53 SNDVSIIDTATNN--VIATVPA--GSSPQGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNT-VAGTVKTGKSPLGLALSP 125 (391)
T ss_dssp GTEEEEEETTTTE--EEEEEEC--SSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTE-EEEEEECSSSEEEEEECT
T ss_pred CCeEEEEECCCCe--EEEEEEC--CCCccceEECCCCCEEEEEECC--CCEEEEEECCCCe-EEEEEeCCCCcceEEECC
Confidence 3578999997652 2333332 2244578899999998776432 3569999999886 43333322222 345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||+.+++....+ ..|+++|+.+ +.....+.... .+..+.|++++ +++....+ ..+.++++.. +....
T Consensus 126 dg~~l~~~~~~~----~~v~~~d~~~-~~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~~--~~v~~~d~~~-~~~~~- 194 (391)
T 1l0q_A 126 DGKKLYVTNNGD----KTVSVINTVT-KAVINTVSVGR--SPKGIAVTPDGTKVYVANFDS--MSISVIDTVT-NSVID- 194 (391)
T ss_dssp TSSEEEEEETTT----TEEEEEETTT-TEEEEEEECCS--SEEEEEECTTSSEEEEEETTT--TEEEEEETTT-TEEEE-
T ss_pred CCCEEEEEeCCC----CEEEEEECCC-CcEEEEEecCC--CcceEEECCCCCEEEEEeCCC--CEEEEEECCC-CeEEE-
Confidence 999998887542 4899999876 43333444332 35678888763 44444444 3578898763 22111
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.... .+..+.++++++.+++... ...-..++++++.+++
T Consensus 195 -----~~~~~~---~~~~~~~~~~g~~l~~~~~-~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 195 -----TVKVEA---APSGIAVNPEGTKAYVTNV-DKYFNTVSMIDTGTNK 235 (391)
T ss_dssp -----EEECSS---EEEEEEECTTSSEEEEEEE-CSSCCEEEEEETTTTE
T ss_pred -----EEecCC---CccceEECCCCCEEEEEec-CcCCCcEEEEECCCCe
Confidence 111111 1222345677886665543 2234678889987775
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.18 E-value=0.0001 Score=69.90 Aligned_cols=186 Identities=12% Similarity=0.061 Sum_probs=101.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEE-EEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeeccccc-eeEEe
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLG-LQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVG-VDTAA 83 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~-~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~ 83 (505)
..+|+++++.++... ........ .... +.|||||++|+ ..... ....|+++|+++++ .....+.... ....|
T Consensus 61 ~~~i~~~d~~~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~~~~~~~~ 135 (331)
T 3u4y_A 61 CQTLVQIETQLEPPK-VVAIQEGQ--SSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNK-FISTIPIPYDAVGIAI 135 (331)
T ss_dssp TCEEEEEECSSSSCE-EEEEEECS--SCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTE-EEEEEECCTTEEEEEE
T ss_pred CCeEEEEECCCCcee-EEecccCC--CCccceEECCCCCEEE-EecCCCCcccEEEEECCCCC-eEEEEECCCCccceEE
Confidence 347999999775321 22332211 1224 68999999987 32222 23389999999886 4333322212 23459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc----eEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSET----TVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~ 157 (505)
+|||+++|+....++ ..+.++++...+.. ...+.. ...+..+.+++|+ +++....+ ..+.+|++..
T Consensus 136 spdg~~l~~~~~~~~---~~i~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~--~~v~v~d~~~- 207 (331)
T 3u4y_A 136 SPNGNGLILIDRSSA---NTVRRFKIDADGVLFDTGQEFISG--GTRPFNITFTPDGNFAFVANLIG--NSIGILETQN- 207 (331)
T ss_dssp CTTSSCEEEEEETTT---TEEEEEEECTTCCEEEEEEEEECS--SSSEEEEEECTTSSEEEEEETTT--TEEEEEECSS-
T ss_pred CCCCCEEEEEecCCC---ceEEEEEECCCCcEeecCCccccC--CCCccceEECCCCCEEEEEeCCC--CeEEEEECCC-
Confidence 999998887765421 12555565432221 112322 2235678888874 44443333 4578898763
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
+...+. ...++.. .....+.++++++.+++... ....++++++.+++.
T Consensus 208 ~~~~~~-----~~~~~~~-~~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 208 PENITL-----LNAVGTN-NLPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGTL 255 (331)
T ss_dssp TTSCEE-----EEEEECS-SCCCCEEECTTSSEEEEECS---SEEEEEEEETTTTEE
T ss_pred Ccccce-----eeeccCC-CCCceEEECCCCCEEEEEEc---CCCEEEEEECCCCce
Confidence 332110 1111111 11233456788887665543 234588999888773
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=0.00018 Score=68.71 Aligned_cols=181 Identities=10% Similarity=0.020 Sum_probs=105.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCC--------ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-ccc
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDD--------IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVV 77 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~--------~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~ 77 (505)
...|+++|+.+++ ....+..... ....++.|||||+++++.... ....|+++|+++++ .....+ ...
T Consensus 110 ~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~i~~~d~~~~~-~~~~~~~~~~ 185 (353)
T 3vgz_A 110 NSAVTAIDAKTGE--VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-KESVIWVVDGGNIK-LKTAIQNTGK 185 (353)
T ss_dssp TTEEEEEETTTCC--EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-SSCEEEEEETTTTE-EEEEECCCCT
T ss_pred CCEEEEEeCCCCe--eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-CCceEEEEcCCCCc-eEEEecCCCC
Confidence 3578999987753 2223322111 113467899999998776532 35679999999886 333322 211
Q ss_pred -ceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC---CCCceeeEEEEeCC--EEEEEEecCCeeEEEE
Q 010654 78 -GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH---RESVKLQDIQLFID--HLAVYEREGGLQKITT 151 (505)
Q Consensus 78 -~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~ 151 (505)
.....|+|||+.+|+.... ..|+++|+.+ +...+.+.. .....+..+.++++ .+++.. .+...+.+
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~-----~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~v~~ 257 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNAD-----GELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITD--SKAAEVLV 257 (353)
T ss_dssp TCCCCEEETTTTEEEEECTT-----SEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE--SSSSEEEE
T ss_pred ccceEEECCCCCEEEEEcCC-----CeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe--CCCCEEEE
Confidence 1224599999998877532 4888999876 443333332 12233556788875 344333 23356888
Q ss_pred EEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 152 YRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++.. +.... .+..+.+ ..+.++++++.+++.... ...+.+++..+++
T Consensus 258 ~d~~~-~~~~~------~~~~~~~----~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 258 VDTRN-GNILA------KVAAPES----LAVLFNPARNEAYVTHRQ---AGKVSVIDAKSYK 305 (353)
T ss_dssp EETTT-CCEEE------EEECSSC----CCEEEETTTTEEEEEETT---TTEEEEEETTTTE
T ss_pred EECCC-CcEEE------EEEcCCC----ceEEECCCCCEEEEEECC---CCeEEEEECCCCe
Confidence 98753 32221 2222221 123457788876665432 2578899988776
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=98.17 E-value=1.1e-05 Score=78.12 Aligned_cols=86 Identities=12% Similarity=-0.014 Sum_probs=52.9
Q ss_pred CcEEEEEcCCCCcCCC-----CCCchh----HHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHH-
Q 010654 263 DPLLLYGYGSYEICND-----PAFNSS----RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEY- 332 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~-----~~~~~~----~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~- 332 (505)
.|.||++||..+.... ..|... ...|.++||.|+.+|++|.|.... . ..++...++.
T Consensus 6 ~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---~----------a~~l~~~i~~~ 72 (387)
T 2dsn_A 6 DAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---R----------ACEAYAQLVGG 72 (387)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---H----------HHHHHHHHHCE
T ss_pred CCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---c----------HHHHHHHHHhh
Confidence 4568899997654321 224322 378889999999999998764311 0 0112111210
Q ss_pred -------HHH-----------cC----CCCCCcEEEEeeChHHHHHHHHHh
Q 010654 333 -------LIK-----------NC----YCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 333 -------l~~-----------~~----~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
+.+ .. ....+++.++||||||.++..++.
T Consensus 73 ~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~ 123 (387)
T 2dsn_A 73 TVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVS 123 (387)
T ss_dssp EEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHH
T ss_pred hhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHH
Confidence 110 00 023478999999999999988886
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=0.00022 Score=68.11 Aligned_cols=160 Identities=9% Similarity=-0.008 Sum_probs=95.6
Q ss_pred EEEEEeCCCcEEEEEeccc----cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 35 LGLQASESKKFLFIASESK----ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~----~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..+.+||||++|++..... ....|+++|+++++..+.+..........|+|||+.+|+....+ ..|+++|++
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~----~~v~~~d~~ 119 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVN----SAVTAIDAK 119 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTT----TEEEEEETT
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCC----CEEEEEeCC
Confidence 3578999999987776442 25789999999886222232222122345999999988887542 389999987
Q ss_pred CCCCceEEEcCCCCc--------eeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeec
Q 010654 111 NTSETTVLIPHRESV--------KLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 180 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~--------~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (505)
+ ++..+.+...... .+..+.++++ .+++... .....++++++.. +.... .++.......
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~~~d~~~-~~~~~--------~~~~~~~~~~ 188 (353)
T 3vgz_A 120 T-GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIWVVDGGN-IKLKT--------AIQNTGKMST 188 (353)
T ss_dssp T-CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEEEEETTT-TEEEE--------EECCCCTTCC
T ss_pred C-CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEEEEcCCC-CceEE--------EecCCCCccc
Confidence 6 4443334332111 2567888775 3444432 2235688888763 22111 1110111123
Q ss_pred CCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 181 PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.++++++.+++... ...++.++..+++
T Consensus 189 ~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNA----DGELITIDTADNK 217 (353)
T ss_dssp CCEEETTTTEEEEECT----TSEEEEEETTTTE
T ss_pred eEEECCCCCEEEEEcC----CCeEEEEECCCCe
Confidence 3556788887665532 4688999988776
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00014 Score=70.14 Aligned_cols=167 Identities=9% Similarity=0.073 Sum_probs=86.9
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCC----Cce------eeee-ccccce-eEEeeeeCCEEEEEEcCCCCCCc
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKP----EEL------RVLT-PRVVGV-DTAASHRGNHFFITRRSDELFNS 102 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~----~~~------~~l~-~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~ 102 (505)
..+.|||||++|++.......-.+|.++..++ +.+ ..+. ....+. ...|+|||+.+|+....+ .
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----~ 233 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG----G 233 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----C
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC----C
Confidence 35789999999887655444445555555443 101 1111 111122 234999999988877442 3
Q ss_pred eEEEeeCCCCCCceE--EEcC--CCCceeeEEEEeCCEEE-EEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCee
Q 010654 103 ELLACPVDNTSETTV--LIPH--RESVKLQDIQLFIDHLA-VYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 103 ~l~~~~~~~~~~~~~--~~~~--~~~~~i~~~~~~~d~l~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
.+.++++.+ +.... .+.. ........+.|++|+-+ ++....+...+.+|+++...+..+.+. .++. ..
T Consensus 234 ~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~-----~~~~-g~ 306 (361)
T 3scy_A 234 TVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG-----YQLT-GI 306 (361)
T ss_dssp EEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE-----EEEC-SS
T ss_pred eEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee-----EecC-CC
Confidence 677777654 32221 1211 11123468889887533 333433145677888763333222111 1111 00
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
....+.++++++.+++.. ....--.+|.++.++++
T Consensus 307 ~~~~~~~spdg~~l~~~~-~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVAC-RDTNVIQIFERDQATGL 341 (361)
T ss_dssp CCCEEEECTTSCEEEEEE-TTTTEEEEEEECTTTCC
T ss_pred CCceEEECCCCCEEEEEE-CCCCCEEEEEEECCCCc
Confidence 112245678888665443 33344456778877776
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0012 Score=62.59 Aligned_cols=187 Identities=10% Similarity=0.097 Sum_probs=93.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc--ccc-eeEEe
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR--VVG-VDTAA 83 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~-~~~~~ 83 (505)
...|++|++.+. .+...+...........++|||||++|++.......-.+|.++.+++. .+.+..- ... ....|
T Consensus 14 ~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 91 (343)
T 1ri6_A 14 SQQIHVWNLNHE-GALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAESALPGSLTHIST 91 (343)
T ss_dssp GTEEEEEEECTT-SCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEEEECSSCCSEEEE
T ss_pred CCeEEEEEECCC-CcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccccccCCCCcEEEE
Confidence 346888888432 222222221112222357899999998876654333344545544665 4443211 112 22459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCC-ceE--EEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSE-TTV--LIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~--~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
+|||+.|++....+ ..+.++++.. +. ... .+... ..+..+.|++++ +++....+ ..+.+|++...+
T Consensus 92 s~dg~~l~~~~~~~----~~i~~~d~~~-~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~--~~v~~~d~~~~~ 162 (343)
T 1ri6_A 92 DHQGQFVFVGSYNA----GNVSVTRLED-GLPVGVVDVVEGL--DGCHSANISPDNRTLWVPALKQ--DRICLFTVSDDG 162 (343)
T ss_dssp CTTSSEEEEEETTT----TEEEEEEEET-TEEEEEEEEECCC--TTBCCCEECTTSSEEEEEEGGG--TEEEEEEECTTS
T ss_pred cCCCCEEEEEecCC----CeEEEEECCC-CccccccccccCC--CCceEEEECCCCCEEEEecCCC--CEEEEEEecCCC
Confidence 99999988887542 3677777632 21 111 22222 235677888763 44333233 357888886423
Q ss_pred CcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECC
Q 010654 159 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
. ...+.. .....+... ....+.++++++.+++.... ...+.++++.
T Consensus 163 ~-~~~~~~-~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~ 208 (343)
T 1ri6_A 163 H-LVAQDP-AEVTTVEGA-GPRHMVFHPNEQYAYCVNEL---NSSVDVWELK 208 (343)
T ss_dssp C-EEEEEE-EEEECSTTC-CEEEEEECTTSSEEEEEETT---TTEEEEEESS
T ss_pred c-eeeecc-cccccCCCC-CcceEEECCCCCEEEEEeCC---CCEEEEEEec
Confidence 2 211100 011111110 11123467888866655432 2466777763
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.001 Score=65.63 Aligned_cols=138 Identities=17% Similarity=0.055 Sum_probs=85.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-----cceEEEEEeCCCCCceeeeeccccce-e
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-----ITRFVFYLDVSKPEELRVLTPRVVGV-D 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-----~~~~l~~~d~~~~~~~~~l~~~~~~~-~ 80 (505)
...|++|++.++. ....+ ........+.|+|||++|++..... ....|+++|+.+++ ........... .
T Consensus 233 ~~~i~~~d~~~~~--~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~~~ 307 (433)
T 3bws_A 233 SEDISVIDRKTKL--EIRKT--DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTIGPPGNKRH 307 (433)
T ss_dssp TTEEEEEETTTTE--EEEEC--CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEEEEEECEEE
T ss_pred CCcEEEEECCCCc--EEEEe--cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-EEeeccCCCCcce
Confidence 3468899987642 22222 2223345788999999988775432 25689999999886 43333222222 2
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCe------------
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGL------------ 146 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~------------ 146 (505)
..|+|+|+.+++....+ ..+.++++.+ +.....+... ..+..+.|++++ +++....+..
T Consensus 308 ~~~~~~g~~l~~~~~~~----~~v~v~d~~~-~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 308 IVSGNTENKIYVSDMCC----SKIEVYDLKE-KKVQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp EEECSSTTEEEEEETTT----TEEEEEETTT-TEEEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSC
T ss_pred EEECCCCCEEEEEecCC----CEEEEEECCC-CcEEEEecCC--CCCCeEEEcCCCCEEEEEecCCCccccccccccccc
Confidence 34999999998886543 4889999876 4333344432 236788898864 4444333221
Q ss_pred eEEEEEEcCC
Q 010654 147 QKITTYRLPA 156 (505)
Q Consensus 147 ~~l~~~~~~~ 156 (505)
..+++|++..
T Consensus 381 g~v~~~d~~~ 390 (433)
T 3bws_A 381 GKVYVIDTTT 390 (433)
T ss_dssp CEEEEEETTT
T ss_pred eEEEEEECCC
Confidence 2788998763
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00068 Score=66.87 Aligned_cols=185 Identities=14% Similarity=0.051 Sum_probs=108.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
..|++|++.++. ....+. ........+.|+|||+++++.... ...|+++|+.+++ ........... ...|+||
T Consensus 191 ~~v~~~d~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (433)
T 3bws_A 191 NAVHVFDLKTLA--YKATVD-LTGKWSKILLYDPIRDLVYCSNWI--SEDISVIDRKTKL-EIRKTDKIGLPRGLLLSKD 264 (433)
T ss_dssp TEEEEEETTTCC--EEEEEE-CSSSSEEEEEEETTTTEEEEEETT--TTEEEEEETTTTE-EEEECCCCSEEEEEEECTT
T ss_pred CEEEEEECCCce--EEEEEc-CCCCCeeEEEEcCCCCEEEEEecC--CCcEEEEECCCCc-EEEEecCCCCceEEEEcCC
Confidence 568999997642 333333 223345578899999998766432 3479999998875 33333222222 2349999
Q ss_pred CCEEEEEEcCCCC---CCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 87 GNHFFITRRSDEL---FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 87 g~~l~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
|+.++..+...+. ....|+++|+.+ +.....+... ..+..+.|+++ .+++....++ .+.+|++.. +...
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~--~v~v~d~~~-~~~~ 338 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTIGPP--GNKRHIVSGNTENKIYVSDMCCS--KIEVYDLKE-KKVQ 338 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEEEEE--ECEEEEEECSSTTEEEEEETTTT--EEEEEETTT-TEEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCC-CcEEeeccCC--CCcceEEECCCCCEEEEEecCCC--EEEEEECCC-CcEE
Confidence 9998888753211 235899999876 3332233221 13557788776 4555545554 578898763 2211
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCC-----------ceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTP-----------PSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----------~~~~~~~~~~~~ 213 (505)
. .+..... +..+.++++++.+++.......+ ..+++++..+++
T Consensus 339 ~------~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 339 K------SIPVFDK---PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp E------EEECSSS---EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred E------EecCCCC---CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 1 1111111 22245677888776665543332 489999988776
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00015 Score=69.48 Aligned_cols=146 Identities=16% Similarity=0.149 Sum_probs=75.1
Q ss_pred ceEEEEECCCCCCCCeEEE--EecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec---ccc-----
Q 010654 8 DKAWLHKLEADQSNDICLY--HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---RVV----- 77 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~--~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~---~~~----- 77 (505)
.+|++|++.+. .+...+. ..........++|||||+++++.......-.+|.++..++. ++.+.. ...
T Consensus 162 ~~v~~~~~~~~-g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 162 DKVYVYNVSDA-GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA-FTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TEEEEEEECTT-SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE-EEEEEEEESSCTTCCSC
T ss_pred CEEEEEEECCC-CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-eEEeeeeeecCCCCCCC
Confidence 46778887632 2222221 11112123357899999988776554444455656654564 433221 111
Q ss_pred -ce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEE
Q 010654 78 -GV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTY 152 (505)
Q Consensus 78 -~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~ 152 (505)
.. ...|||||++||+....+ ..+.+++++..+.... .+... ...+..+.|++|+ .+++...+ ...+.+|
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~----~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~-~~~v~v~ 313 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGY----NTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQN-TDNATLY 313 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETT----TEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECTTSSEEEEEETT-TTEEEEE
T ss_pred CcceeEEECCCCCEEEEEeCCC----CEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcC-CCcEEEE
Confidence 11 134999999998876532 3677777653122221 22221 2235678888874 33333332 1346677
Q ss_pred EcCCCCCcc
Q 010654 153 RLPAVGEPL 161 (505)
Q Consensus 153 ~~~~~~~~~ 161 (505)
+++.+++.+
T Consensus 314 ~~d~~tg~l 322 (347)
T 3hfq_A 314 ARDLTSGKL 322 (347)
T ss_dssp EECTTTCCE
T ss_pred EEeCCCCeE
Confidence 665434433
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0012 Score=63.23 Aligned_cols=184 Identities=13% Similarity=0.049 Sum_probs=103.0
Q ss_pred ceEEEEECCCCCCCCeEEEEe-cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
..|.+||+.+++.....-+.. ........++|||||++|+..... ..|.+.|+.+++..+.+..+...+. ..|++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~ 179 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLAQQVVLSSYRAHAAQVTCVAASP 179 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCcCCceEEEEecC
Confidence 358889998764322222211 123345578899999997654432 3578889988863344443333332 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc-CCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
++..+++....+ ..+.+.|+.. +.....+. ......+..+.|.++ .++++...++ .+.+|++.. +..+.
T Consensus 180 ~~~~~l~s~s~D----~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg--~v~~wd~~~-~~~~~ 251 (344)
T 4gqb_B 180 HKDSVFLSCSED----NRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG--TVSLVDTKS-TSCVL 251 (344)
T ss_dssp SCTTEEEEEETT----SCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTS--EEEEEESCC---CCE
T ss_pred CCCCceeeeccc----cccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCC--cEEEEECCC-CcEEE
Confidence 998776665443 3677888875 32221222 222334667788763 4666666665 467788764 32221
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. +......+..+.+++++..++++.+.. ..+.+.|..+++
T Consensus 252 ~--------~~~h~~~v~~v~fsp~g~~~lasgs~D---~~i~vwd~~~~~ 291 (344)
T 4gqb_B 252 S--------SAVHSQCVTGLVFSPHSVPFLASLSED---CSLAVLDSSLSE 291 (344)
T ss_dssp E--------EECCSSCEEEEEECSSSSCCEEEEETT---SCEEEECTTCCE
T ss_pred E--------EcCCCCCEEEEEEccCCCeEEEEEeCC---CeEEEEECCCCc
Confidence 1 111111233345677877677666643 346777777665
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0001 Score=66.46 Aligned_cols=142 Identities=11% Similarity=0.010 Sum_probs=81.9
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCc----------------hhHHHHHHCCcEEEE
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFN----------------SSRLSLLDRGFIFAI 297 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~----------------~~~~~l~~~G~~v~~ 297 (505)
.+.+....|..+..|++ +... + ....|++++++|||+.+... ... .....|.+. ..++.
T Consensus 23 y~~v~~~~~~~lFywf~-es~~-~-~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anvlf 98 (255)
T 1whs_A 23 YITVDEGAGRSLFYLLQ-EAPE-D-AQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANVLF 98 (255)
T ss_dssp EEEEETTTTEEEEEEEE-CCCG-G-GCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEEEE
T ss_pred EEECCCCCCcEEEEEEE-EecC-C-CCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccccc-CCEEE
Confidence 34444445677876644 4332 2 35689999999999876543 110 001123333 67889
Q ss_pred Ecc-cCCCCCchhHHHccc-ccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHHhh----C--CCcee
Q 010654 298 AQI-RGGGELGRQWYENGK-FLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R--PDLFK 368 (505)
Q Consensus 298 ~d~-rG~~~~g~~~~~~~~-~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~--p~~~~ 368 (505)
+|. .|.|-+-..- .... ...-....+|+..+++. +.+.+.....++.|+|.||||..+..++.. . .--++
T Consensus 99 iDqPvGtGfSy~~~-~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLk 177 (255)
T 1whs_A 99 LDSPAGVGFSYTNT-SSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLK 177 (255)
T ss_dssp ECCSTTSTTCEESS-GGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred EecCCCCccCCCcC-ccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccc
Confidence 995 5665321110 0011 01112445666666654 344444445789999999999987666532 1 13578
Q ss_pred EEEecCCchhhhh
Q 010654 369 AAVAAVPFVDVLT 381 (505)
Q Consensus 369 a~v~~~~~~d~~~ 381 (505)
+++...|++|...
T Consensus 178 Gi~ign~~~d~~~ 190 (255)
T 1whs_A 178 GFMVGNGLIDDYH 190 (255)
T ss_dssp EEEEEEECCBHHH
T ss_pred eEEecCCccCHHH
Confidence 9999999888643
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0023 Score=61.40 Aligned_cols=169 Identities=12% Similarity=0.139 Sum_probs=84.5
Q ss_pred EEEEeCCCcEEEEEeccc---cceEEEEEeCCCCCceeeeeccc-cc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 36 GLQASESKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRV-VG-VDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~---~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
.++|||||++|++..... ..-.+|.++.+++. ++.+.... .+ ....++.||+.|++....+ ..+.++++.
T Consensus 54 ~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~----~~v~~~~~~ 128 (361)
T 3scy_A 54 YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT-LHLLNTQKTMGADPCYLTTNGKNIVTANYSG----GSITVFPIG 128 (361)
T ss_dssp SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE-EEEEEEEECSSSCEEEEEECSSEEEEEETTT----TEEEEEEBC
T ss_pred eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc-EEEeeEeccCCCCcEEEEECCCEEEEEECCC----CEEEEEEeC
Confidence 357999999987776532 24456777777675 66554322 12 1223444888888766432 367777765
Q ss_pred CCCCce---EEEcCCC---------CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCC----c-ccccCCCceeecc
Q 010654 111 NTSETT---VLIPHRE---------SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE----P-LKSLQGGKSVEFI 173 (505)
Q Consensus 111 ~~~~~~---~~~~~~~---------~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~----~-~~~l~~~~~~~~~ 173 (505)
..+... ..+.... ...+..+.+++|+-++++...+...+.+|+++..+. . +...........+
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 208 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA 208 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC
Confidence 322111 0111111 112356788887432222222334677787764332 1 1100000011111
Q ss_pred CCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 174 DPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
... ....+.+++|++.+++.... ...+.++++.+++
T Consensus 209 ~~~-~~~~~~~spdg~~l~v~~~~---~~~v~v~~~~~g~ 244 (361)
T 3scy_A 209 PGS-GPRHLIFNSDGKFAYLINEI---GGTVIAFRYADGM 244 (361)
T ss_dssp TTC-CEEEEEECTTSSEEEEEETT---TCEEEEEEEETTE
T ss_pred CCC-CCeEEEEcCCCCEEEEEcCC---CCeEEEEEecCCc
Confidence 111 11224567888876665432 2456777766665
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0012 Score=63.85 Aligned_cols=163 Identities=13% Similarity=0.018 Sum_probs=86.9
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+.-.+++||||+++++.+.+. ...|.+.|+.++. ..........+ ...|||||+.++..+.. .+.+++...
T Consensus 135 ~~~~v~fSpDg~~la~as~~~-d~~i~iwd~~~~~-~~~~~~~~~~V~~v~fspdg~~l~s~s~~------~~~~~~~~~ 206 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV-PAIMRIIDPSDLT-EKFEIETRGEVKDLHFSTDGKVVAYITGS------SLEVISTVT 206 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS-SCEEEEEETTTTE-EEEEEECSSCCCEEEECTTSSEEEEECSS------CEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEECCC-CCEEEEeECCCCc-EEEEeCCCCceEEEEEccCCceEEeccce------eEEEEEecc
Confidence 444678999999987765433 3568888999886 33222222222 34599999988766532 455666554
Q ss_pred CCCceE-EEcCCCCceeeEEEEeCC-EEEEEEecCCe--eEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCccc
Q 010654 112 TSETTV-LIPHRESVKLQDIQLFID-HLAVYEREGGL--QKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFS 187 (505)
Q Consensus 112 ~~~~~~-~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 187 (505)
+.... .........+..+.++++ ..++....++. ..+..+++........ ....+......+..+.++|+
T Consensus 207 -~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 207 -GSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL-----RSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp -CCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE-----EEEEEESSCSCEEEEEECTT
T ss_pred -CcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce-----eeeeecCCCCCeEeEEECCC
Confidence 22211 222223445778888776 44444444332 2455666542111000 01111111111233456788
Q ss_pred CCEEEEEEecCCCCceEEEEECCCCc
Q 010654 188 SRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 188 ~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++.++ +.+.. ..+.+.+..+++
T Consensus 281 g~~la-sgs~D---~~V~iwd~~~~~ 302 (365)
T 4h5i_A 281 GELAV-LASND---NSIALVKLKDLS 302 (365)
T ss_dssp SCEEE-EEETT---SCEEEEETTTTE
T ss_pred CCceE-EEcCC---CEEEEEECCCCc
Confidence 87544 44432 457788887776
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0002 Score=67.88 Aligned_cols=177 Identities=12% Similarity=0.052 Sum_probs=98.7
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ceeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~ 85 (505)
..+|++|++.++ +....+.. +.....+.|||||++|++. ...|+++|+++++ .....+... .....|+|
T Consensus 114 ~~~i~v~d~~~~--~~~~~~~~--~~~~~~~~~s~dg~~l~~~-----~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~s~ 183 (337)
T 1pby_B 114 PTRVALYDAETL--SRRKAFEA--PRQITMLAWARDGSKLYGL-----GRDLHVMDPEAGT-LVEDKPIQSWEAETYAQP 183 (337)
T ss_dssp CCEEEEEETTTT--EEEEEEEC--CSSCCCEEECTTSSCEEEE-----SSSEEEEETTTTE-EEEEECSTTTTTTTBCCC
T ss_pred CceEEEEECCCC--cEEEEEeC--CCCcceeEECCCCCEEEEe-----CCeEEEEECCCCc-EeeeeeccccCCCceeCC
Confidence 578999999764 22333332 1122356799999998876 2469999999886 433222211 11235899
Q ss_pred eCCEEEEEEcCCCC-------------------CCceEEEeeCCCCCCce-EEEcCCCCceeeEEEEeCCE-EEEEEecC
Q 010654 86 RGNHFFITRRSDEL-------------------FNSELLACPVDNTSETT-VLIPHRESVKLQDIQLFIDH-LAVYEREG 144 (505)
Q Consensus 86 dg~~l~~~~~~~~~-------------------~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~d~-l~~~~~~~ 144 (505)
||+.+++....++. ....|+++|+.+ ++.. ..+... ...+..+.+++|+ .+++.
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--- 258 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-GEMAMREVRIM-DVFYFSTAVNPAKTRAFGA--- 258 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT-CCEEEEEEEEC-SSCEEEEEECTTSSEEEEE---
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC-CCceEeecCCC-CCceeeEEECCCCCEEEEe---
Confidence 99987665432110 011678889876 3322 112222 1235568888874 23333
Q ss_pred CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 145 GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...+.+|++.. +.... .+..... +..+.++++++.+++. . ....+.++++.+++
T Consensus 259 -~~~v~~~d~~~-~~~~~------~~~~~~~---~~~~~~s~dg~~l~~~-~---~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 259 -YNVLESFDLEK-NASIK------RVPLPHS---YYSVNVSTDGSTVWLG-G---ALGDLAAYDAETLE 312 (337)
T ss_dssp -ESEEEEEETTT-TEEEE------EEECSSC---CCEEEECTTSCEEEEE-S---BSSEEEEEETTTCC
T ss_pred -CCeEEEEECCC-CcCcc------eecCCCc---eeeEEECCCCCEEEEE-c---CCCcEEEEECcCCc
Confidence 25688898763 22111 1111111 1223467788866554 2 24678999988776
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00021 Score=67.64 Aligned_cols=96 Identities=11% Similarity=0.011 Sum_probs=58.7
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCc----eEEEEEEeCCCcEEEEEecc------c---cceEEEEEeCCCCCceeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDI----YSLGLQASESKKFLFIASES------K---ITRFVFYLDVSKPEELRVLT 73 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~----~~~~~~~SpDg~~i~~~~~~------~---~~~~l~~~d~~~~~~~~~l~ 73 (505)
..+|++|++.+++ ....+....+. ....+.|||||++|++.... . ....|+++|+++++..+.+.
T Consensus 55 ~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 55 SESLVKIDLVTGE--TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp TTEEEEEETTTCC--EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCC--eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 3578999987753 22223211100 11256899999998877522 1 24789999998875222232
Q ss_pred ccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 74 PRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 74 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
....-....|+|||++|++. + ..|+++|+++
T Consensus 133 ~~~~~~~~~~s~dg~~l~~~-~------~~i~~~d~~~ 163 (337)
T 1pby_B 133 APRQITMLAWARDGSKLYGL-G------RDLHVMDPEA 163 (337)
T ss_dssp CCSSCCCEEECTTSSCEEEE-S------SSEEEEETTT
T ss_pred CCCCcceeEECCCCCEEEEe-C------CeEEEEECCC
Confidence 22111224599999998887 1 3688899876
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0037 Score=58.99 Aligned_cols=189 Identities=6% Similarity=0.045 Sum_probs=93.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeeccccce-eEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~-~~~~s 84 (505)
..|.+|++.....+.+.+..-..+.....++|||||++|++.... ...++++|++++. +........... ...|+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 137 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANIS 137 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEEEEEECCCTTBCCCEEC
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC--CCeEEEEECCCCccccccccccCCCCceEEEEC
Confidence 467777775211222222221112223367899999998776543 3446666664332 121212221122 23599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE----EEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTV----LIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
|||+.+++....+ ..|+++++...+.... .+.......+..+.|++++ +++....+ ..+.+|+++...
T Consensus 138 ~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~--~~i~~~~~~~~~ 211 (343)
T 1ri6_A 138 PDNRTLWVPALKQ----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN--SSVDVWELKDPH 211 (343)
T ss_dssp TTSSEEEEEEGGG----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEESSCTT
T ss_pred CCCCEEEEecCCC----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC--CEEEEEEecCCC
Confidence 9999988766332 3788888764232211 1222223345678888874 33333233 457888886423
Q ss_pred CcccccCCCceee-ccCC---eeeecCCCCcccCCEEEEEEecCCCCceEEEEECC
Q 010654 159 EPLKSLQGGKSVE-FIDP---VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 159 ~~~~~l~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
+..+.+ ..+. ++.. ......+.++++++.+++.... ...+.++++.
T Consensus 212 g~~~~~---~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---~~~i~v~d~~ 261 (343)
T 1ri6_A 212 GNIECV---QTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---ASLITVFSVS 261 (343)
T ss_dssp SCCEEE---EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---TTEEEEEEEC
T ss_pred CcEEEE---eeccccCccccccCCccceEECCCCCEEEEEecC---CCEEEEEEEc
Confidence 322111 0111 1111 0001124567888877655432 2456666665
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=9e-05 Score=74.14 Aligned_cols=112 Identities=21% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCcEEEEEcCCCCcCCCCCC--chhHHHHHH-CCcEEEEEcccCCCCCch---hHHH--cccccCCcchHHHHHHHHHHH
Q 010654 262 SDPLLLYGYGSYEICNDPAF--NSSRLSLLD-RGFIFAIAQIRGGGELGR---QWYE--NGKFLKKKNTFTDFIACAEYL 333 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~--~~~~~~l~~-~G~~v~~~d~rG~~~~g~---~~~~--~~~~~~~~~~~~D~~~~~~~l 333 (505)
..|++|++ ||-+... ... ......||+ .|-.++...+|--|.+-. ...+ ......-.+.+.|+...++++
T Consensus 42 ~gPIfl~~-gGEg~~~-~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~ 119 (472)
T 4ebb_A 42 EGPIFFYT-GNEGDVW-AFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRAL 119 (472)
T ss_dssp TCCEEEEE-CCSSCHH-HHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEE-CCCcccc-ccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHH
Confidence 36888888 4433211 000 011234555 488999999996665422 1110 001122237889999999999
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 334 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 334 ~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
...-.....++.++|+||||.+++|+-.++|+++.++++.++
T Consensus 120 k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSA 161 (472)
T 4ebb_A 120 RRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASA 161 (472)
T ss_dssp HHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEeccc
Confidence 876444456899999999999999999999999998887765
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=97.70 E-value=8.3e-05 Score=69.29 Aligned_cols=95 Identities=12% Similarity=-0.052 Sum_probs=59.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..|.||++||..+.. ..|......|. +.|+.+|+++.. ....++++.+.+..++..-. .
T Consensus 22 ~~~~~l~~~hg~~~~~--~~~~~~~~~L~---~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~~-~ 81 (283)
T 3tjm_A 22 SSERPLFLVHPIEGST--TVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQVQ-P 81 (283)
T ss_dssp SSSCCEEEECCTTCCS--GGGHHHHHHCS---SCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTTC-C
T ss_pred CCCCeEEEECCCCCCH--HHHHHHHHhcC---ceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHhC-C
Confidence 3457789999987643 23544444443 899999986421 11334555444433333221 1
Q ss_pred CCcEEEEeeChHHHHHHHHHhhC---CCcee---EEEecCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMR---PDLFK---AAVAAVP 375 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~---p~~~~---a~v~~~~ 375 (505)
.+++.++|||+||.++..++.+. |+.+. ..+...+
T Consensus 82 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~ 122 (283)
T 3tjm_A 82 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 122 (283)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcC
Confidence 26789999999999999888754 67776 6665544
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0063 Score=62.19 Aligned_cols=181 Identities=10% Similarity=0.037 Sum_probs=99.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeC--CCCCceeeeeccccceeEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV--SKPEELRVLTPRVVGVDTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~--~~~~~~~~l~~~~~~~~~~~s~ 85 (505)
..|.+||..+++ ....+..... ...+++||||++|++.... ..|.++|+ .+++....+.....-....|||
T Consensus 159 ~~V~v~D~~t~~--~~~~i~~g~~--~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp 231 (543)
T 1nir_A 159 GQIALVDGDSKK--IVKVIDTGYA--VHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPTKVAEIKIGIEARSVESSK 231 (543)
T ss_dssp TEEEEEETTTCC--EEEEEECSTT--EEEEEECTTSCEEEEEETT---SEEEEEETTSSSCEEEEEEECCSEEEEEEECC
T ss_pred CeEEEEECCCce--EEEEEecCcc--cceEEECCCCCEEEEECCC---CeEEEEECcCCCCcEEEEEecCCCcceEEeCC
Confidence 458888987652 3333331112 3367799999998766543 67999999 6654223333222112234999
Q ss_pred ----eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC----------CCceeeEEEEeCC--EEEEEEecCCeeEE
Q 010654 86 ----RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR----------ESVKLQDIQLFID--HLAVYEREGGLQKI 149 (505)
Q Consensus 86 ----dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~d--~l~~~~~~~~~~~l 149 (505)
||+++|.....+ ..+.++|..+ ++....+... ....+..+.++++ .+++... +..++
T Consensus 232 ~~~~dg~~l~v~~~~~----~~v~v~D~~t-~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~--~~g~i 304 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWP----PQFAIMDGET-LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK--ETGKV 304 (543)
T ss_dssp STTCTTTEEEEEEEES----SEEEEEETTT-CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET--TTTEE
T ss_pred CcCCCCCEEEEEEccC----CeEEEEeccc-cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC--CCCeE
Confidence 999988776432 3677888765 3322223211 1223567777764 3333333 33568
Q ss_pred EEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 150 TTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.++++.. ...+. + ..+. ... ......++++++.++...+.. ..+.++|..+++
T Consensus 305 ~vvd~~~-~~~l~-~---~~i~--~~~-~~~~~~~spdg~~l~va~~~~---~~v~v~D~~tg~ 357 (543)
T 1nir_A 305 LLVNYKD-IDNLT-V---TSIG--AAP-FLHDGGWDSSHRYFMTAANNS---NKVAVIDSKDRR 357 (543)
T ss_dssp EEEECTT-SSSCE-E---EEEE--CCS-SCCCEEECTTSCEEEEEEGGG---TEEEEEETTTTE
T ss_pred EEEEecC-CCcce-e---EEec--cCc-CccCceECCCCCEEEEEecCC---CeEEEEECCCCe
Confidence 8888764 22111 0 0111 111 122345678888665554432 367889988886
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0051 Score=59.23 Aligned_cols=167 Identities=14% Similarity=0.022 Sum_probs=81.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCC-CCCceeeeeccc-cc--eeEEeeeeCCEEEE-EEcCC-----CC----CC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVS-KPEELRVLTPRV-VG--VDTAASHRGNHFFI-TRRSD-----EL----FN 101 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~-~~~~~~~l~~~~-~~--~~~~~s~dg~~l~~-~~~~~-----~~----~~ 101 (505)
.+++||||++|+..... .+.+++++ +++ +..+.... .+ ....|+|||+++++ ..+.+ +. ..
T Consensus 44 ~~a~spdg~~l~~~~~~----~v~~~~~~~~g~-~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMK----KWSSFAVKSPTE-IVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp EEEECTTSSEEEEEEBT----EEEEEEEEETTE-EEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred EEEECCCCCEEEEEccc----eEEEEEECCCCC-EEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 46799999987655443 57777765 664 44332211 12 11348999997544 33200 00 11
Q ss_pred ceEEEeeCCCCCCceE---EEcCCCCceeeEEEEeCCEE-EEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCee
Q 010654 102 SELLACPVDNTSETTV---LIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~d~l-~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
..+.+++++..+...- .+.......+..+.|++|+- +++.. .+...+.+|+++..+. .+.+ ..+.++....
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~-~~~~~v~~~~~~~~g~-~~~~---~~~~~~~~g~ 193 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD-LTANKLWTHRKLASGE-VELV---GSVDAPDPGD 193 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTTSC-EEEE---EEEECSSTTC
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc-CCCCEEEEEEECCCCC-EEEe---eeEecCCCCC
Confidence 3455556542132211 22222233467888998753 33333 3345788898862132 2111 1122211001
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
....+.+++|++.+++... ...--.+|.++..+++
T Consensus 194 ~p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALME-AGNRICEYVIDPATHM 228 (365)
T ss_dssp CEEEEEECTTSSEEEEEET-TTTEEEEEEECTTTCC
T ss_pred CCCEeEECCCCCEEEEEEC-CCCeEEEEEEeCCCCc
Confidence 1222456888887655433 2222245555555565
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00015 Score=71.84 Aligned_cols=137 Identities=9% Similarity=0.032 Sum_probs=77.2
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch----------------hHHHHHHCCcEEEEEc-
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS----------------SRLSLLDRGFIFAIAQ- 299 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~----------------~~~~l~~~G~~v~~~d- 299 (505)
.++..++..+..+ +.+... + ....|+++++|||||.+....+.. ....|.+ -..++.+|
T Consensus 25 yv~v~~~~~lfy~-f~~s~~-~-~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~-~~~~lfiDq 100 (452)
T 1ivy_A 25 YLKSSGSKHLHYW-FVESQK-D-PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLYLES 100 (452)
T ss_dssp EEECSTTEEEEEE-EECCSS-C-GGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEEECC
T ss_pred EEeeCCCCeEEEE-EEEcCC-C-CCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccc-cccEEEEec
Confidence 3444456777766 444332 2 245799999999998753211000 0012223 36899999
Q ss_pred ccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh----CCCceeEEEecC
Q 010654 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----RPDLFKAAVAAV 374 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~p~~~~a~v~~~ 374 (505)
++|.|-+-.. .......-.....|+..++ +|+...+....+++.|+|.||||..+..++.. .+-.+++++...
T Consensus 101 P~GtGfS~~~--~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign 178 (452)
T 1ivy_A 101 PAGVGFSYSD--DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGN 178 (452)
T ss_dssp STTSTTCEES--SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred CCCCCcCCcC--CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecC
Confidence 4777643211 0000000012344444444 45555444455789999999999955554432 345689999999
Q ss_pred Cchhh
Q 010654 375 PFVDV 379 (505)
Q Consensus 375 ~~~d~ 379 (505)
|++|.
T Consensus 179 ~~~d~ 183 (452)
T 1ivy_A 179 GLSSY 183 (452)
T ss_dssp CCSBH
T ss_pred CccCh
Confidence 98763
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0013 Score=62.40 Aligned_cols=95 Identities=9% Similarity=0.049 Sum_probs=53.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecC-C---ce-EEEEEEeCCCcEEEEEecc---------ccceEEEEEeCCCCCcee--
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKD-D---IY-SLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELR-- 70 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~-~---~~-~~~~~~SpDg~~i~~~~~~---------~~~~~l~~~d~~~~~~~~-- 70 (505)
...|++|++.++. ....+.... + .. ...+.|||||++|++.... .....|+++|+++++..+
T Consensus 64 ~~~i~~~d~~t~~--~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 141 (349)
T 1jmx_B 64 YGDIYGIDLDTCK--NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV 141 (349)
T ss_dssp TTEEEEEETTTTE--EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS
T ss_pred CCcEEEEeCCCCc--EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee
Confidence 4568999987642 222222111 0 11 1256899999998887643 113689999998864111
Q ss_pred eeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 71 VLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 71 ~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
......... ...|+|||+ +++.+ . .|+++|+++
T Consensus 142 ~~~~~~~~~~~~~~s~dg~-l~~~~-~------~i~~~d~~~ 175 (349)
T 1jmx_B 142 RTFPMPRQVYLMRAADDGS-LYVAG-P------DIYKMDVKT 175 (349)
T ss_dssp EEEECCSSCCCEEECTTSC-EEEES-S------SEEEECTTT
T ss_pred eeccCCCcccceeECCCCc-EEEcc-C------cEEEEeCCC
Confidence 111111122 234999999 66632 1 377777754
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0098 Score=55.79 Aligned_cols=178 Identities=7% Similarity=0.036 Sum_probs=101.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.++.......+.. .......+.|+|||++|+.... ...++++|+.+++....+........ ..|+|+
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp SEEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CcEEEEECCCCCcceeeeccc-CCCceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCceeeeeecccCceEEEEECCC
Confidence 468899997753222223332 2223457789999999876543 24588999988752333333232222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQ 165 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 165 (505)
|+.|+..+.. ..++++|+.+ +.....+.. ...+..+.|+++. .+++...++ .+.+|++.. ...
T Consensus 195 ~~~l~~~~~d-----g~i~~~d~~~-~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~--~i~~~~~~~--~~~---- 258 (337)
T 1gxr_A 195 GTKLWTGGLD-----NTVRSWDLRE-GRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESS--NVEVLHVNK--PDK---- 258 (337)
T ss_dssp SSEEEEEETT-----SEEEEEETTT-TEEEEEEEC--SSCEEEEEECTTSSEEEEEETTS--CEEEEETTS--SCE----
T ss_pred CCEEEEEecC-----CcEEEEECCC-CceEeeecC--CCceEEEEECCCCCEEEEEcCCC--cEEEEECCC--CCe----
Confidence 9988876643 3788889876 333223332 3346788888763 444444444 477888763 211
Q ss_pred CCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 166 GGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+......+..+.++++++.++ +.+. -..+..+++.+++
T Consensus 259 ----~~~~~~~~~v~~~~~~~~~~~l~-~~~~---dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 259 ----YQLHLHESCVLSLKFAYCGKWFV-STGK---DNLLNAWRTPYGA 298 (337)
T ss_dssp ----EEECCCSSCEEEEEECTTSSEEE-EEET---TSEEEEEETTTCC
T ss_pred ----EEEcCCccceeEEEECCCCCEEE-EecC---CCcEEEEECCCCe
Confidence 11111111122345667777544 3332 3567788877766
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.018 Score=53.96 Aligned_cols=180 Identities=12% Similarity=0.054 Sum_probs=102.4
Q ss_pred ceEEEEECCCCCCC-CeEEEEe-cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeeccccce-eEE
Q 010654 8 DKAWLHKLEADQSN-DICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGV-DTA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~-~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~-~~~ 82 (505)
..|.+|++.++... ....+.. ........+.|+|||++|+.... ...|.++|+.+++ ....+....... ...
T Consensus 72 g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 148 (337)
T 1gxr_A 72 GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC---CCcEEEEECCCCCcceeeecccCCCceEEEE
Confidence 46889999765322 2222221 22344557899999998876543 3468888998875 112222222222 234
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
|+|+++.++..+.. ..+.++++.+ +.....+... ...+..+.|+++. .+++...++ .+.+|++.. +...
T Consensus 149 ~~~~~~~l~~~~~d-----g~v~~~d~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg--~i~~~d~~~-~~~~ 218 (337)
T 1gxr_A 149 ISPDSKVCFSCCSD-----GNIAVWDLHN-QTLVRQFQGH-TDGASCIDISNDGTKLWTGGLDN--TVRSWDLRE-GRQL 218 (337)
T ss_dssp ECTTSSEEEEEETT-----SCEEEEETTT-TEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--EEEEEETTT-TEEE
T ss_pred ECCCCCEEEEEeCC-----CcEEEEeCCC-Cceeeeeecc-cCceEEEEECCCCCEEEEEecCC--cEEEEECCC-CceE
Confidence 99999988876643 3688889876 3332244433 3357889998763 555555554 477888763 2211
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. ....+.. +..+.++++++.+++... -..+..+++.+++
T Consensus 219 ~------~~~~~~~---v~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 219 Q------QHDFTSQ---IFSLGYCPTGEWLAVGME----SSNVEVLHVNKPD 257 (337)
T ss_dssp E------EEECSSC---EEEEEECTTSSEEEEEET----TSCEEEEETTSSC
T ss_pred e------eecCCCc---eEEEEECCCCCEEEEEcC----CCcEEEEECCCCC
Confidence 1 1121121 222345677776554432 2457778877665
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.024 Score=55.11 Aligned_cols=182 Identities=10% Similarity=0.046 Sum_probs=105.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
..|++|++.++ +...++..........++|+|||++|+..... ..|.++|+.+++..+.+.... +....++.++
T Consensus 113 ~~v~lw~~~~~--~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~ 186 (401)
T 4aez_A 113 RNVYVWNADSG--SVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVESQTKLRTMAGHQ-ARVGCLSWNR 186 (401)
T ss_dssp TEEEEEETTTC--CEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEEEECCCS-SCEEEEEEET
T ss_pred CeEEEeeCCCC--cEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECcCCeEEEEecCCC-CceEEEEECC
Confidence 46999999775 34445544334456688999999998776543 468888998876334443332 2233344477
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccCC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQG 166 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 166 (505)
+.|+..+.. ..+.+.|+...+.....+.... ..+..+.|+++. .+++...++ .+.+|++.. +....
T Consensus 187 ~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~--~v~iwd~~~-~~~~~---- 253 (401)
T 4aez_A 187 HVLSSGSRS-----GAIHHHDVRIANHQIGTLQGHS-SEVCGLAWRSDGLQLASGGNDN--VVQIWDARS-SIPKF---- 253 (401)
T ss_dssp TEEEEEETT-----SEEEEEETTSSSCEEEEEECCS-SCEEEEEECTTSSEEEEEETTS--CEEEEETTC-SSEEE----
T ss_pred CEEEEEcCC-----CCEEEEecccCcceeeEEcCCC-CCeeEEEEcCCCCEEEEEeCCC--eEEEccCCC-CCccE----
Confidence 766655433 3788888874232222333333 357889998763 555555554 477888763 22111
Q ss_pred CceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 167 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+......+..+.+++++..++++.++ ..-..+..+++.+++
T Consensus 254 ----~~~~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 254 ----TKTNHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATGA 295 (401)
T ss_dssp ----EECCCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTCC
T ss_pred ----EecCCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCCC
Confidence 111111123334566777766665542 234568888887765
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0039 Score=60.12 Aligned_cols=169 Identities=10% Similarity=-0.032 Sum_probs=89.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ce--eEEe
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GV--DTAA 83 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~--~~~~ 83 (505)
...|.+||+.+.. ....++. ..-..+++|||||++|+.... ..+.+++..++......+.... .. ...|
T Consensus 156 d~~i~iwd~~~~~--~~~~~~~--~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 156 PAIMRIIDPSDLT--EKFEIET--RGEVKDLHFSTDGKVVAYITG----SSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp SCEEEEEETTTTE--EEEEEEC--SSCCCEEEECTTSSEEEEECS----SCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred CCEEEEeECCCCc--EEEEeCC--CCceEEEEEccCCceEEeccc----eeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 3568899987742 2333332 222347889999999876542 2366777777651222221111 11 1349
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCce----EEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETT----VLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
+|||+.++..+..+ .....+...++.. .... ..+..... .+..+++++|+ ++.+...++ .+.+|++.+ +
T Consensus 228 spdg~~l~~~s~d~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~-~V~~~~~Spdg~~lasgs~D~--~V~iwd~~~-~ 301 (365)
T 4h5i_A 228 IADDTVLIAASLKK-GKGIVLTKISIKS-GNTSVLRSKQVTNRFK-GITSMDVDMKGELAVLASNDN--SIALVKLKD-L 301 (365)
T ss_dssp EETTEEEEEEEESS-SCCEEEEEEEEET-TEEEEEEEEEEESSCS-CEEEEEECTTSCEEEEEETTS--CEEEEETTT-T
T ss_pred cCCCCEEEEEecCC-cceeEEeeccccc-ceecceeeeeecCCCC-CeEeEEECCCCCceEEEcCCC--EEEEEECCC-C
Confidence 99999888777553 2223555666543 2111 12332222 47788999875 444455554 367898763 3
Q ss_pred CcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 159 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
..+..+. ......+..+.++||++. +++.+.
T Consensus 302 ~~~~~~~-------~gH~~~V~~v~fSpdg~~-laS~S~ 332 (365)
T 4h5i_A 302 SMSKIFK-------QAHSFAITEVTISPDSTY-VASVSA 332 (365)
T ss_dssp EEEEEET-------TSSSSCEEEEEECTTSCE-EEEEET
T ss_pred cEEEEec-------CcccCCEEEEEECCCCCE-EEEEeC
Confidence 2221111 111112334567888874 445543
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.014 Score=55.00 Aligned_cols=179 Identities=14% Similarity=0.073 Sum_probs=100.7
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
...|.+||+.++. ....+... +.-...++|+|||++|+.... ...+.+.|+.++.....+....... ...|+|
T Consensus 101 D~~i~lWd~~~~~--~~~~~~~~-~~~~~~~~~spdg~~l~~g~~---dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 101 DAHIRLWDLENGK--QIKSIDAG-PVDAWTLAFSPDSQYLATGTH---VGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 174 (321)
T ss_dssp TSEEEEEETTTTE--EEEEEECC-TTCCCCEEECTTSSEEEEECT---TSEEEEEETTTCSEEEEEECSSSCEEEEEECT
T ss_pred CCcEEEEECCCCC--EEEEEeCC-CccEEEEEECCCCCEEEEEcC---CCcEEEEEcCCCceeEEecCCCceEEEEEECC
Confidence 3568899997752 23333322 222235789999999875433 3468888988876222333222222 234999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
||+.|+.-+.+ ..+.++|+.+ +.....+... ...+..+.|+++. ++++...++ .+.+|++.. +....
T Consensus 175 dg~~lasg~~d-----g~i~iwd~~~-~~~~~~~~~h-~~~v~~l~~spd~~~l~s~s~dg--~i~iwd~~~-~~~~~-- 242 (321)
T 3ow8_A 175 DGKYLASGAID-----GIINIFDIAT-GKLLHTLEGH-AMPIRSLTFSPDSQLLVTASDDG--YIKIYDVQH-ANLAG-- 242 (321)
T ss_dssp TSSEEEEEETT-----SCEEEEETTT-TEEEEEECCC-SSCCCEEEECTTSCEEEEECTTS--CEEEEETTT-CCEEE--
T ss_pred CCCEEEEEcCC-----CeEEEEECCC-CcEEEEEccc-CCceeEEEEcCCCCEEEEEcCCC--eEEEEECCC-cceeE--
Confidence 99988866643 3678889876 3322234332 2347788998874 555555555 367888763 22111
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+......+..+.+++++..+ ++.+.. ..+.+.++.+++
T Consensus 243 ------~~~~h~~~v~~~~~sp~~~~l-~s~s~D---~~v~iwd~~~~~ 281 (321)
T 3ow8_A 243 ------TLSGHASWVLNVAFCPDDTHF-VSSSSD---KSVKVWDVGTRT 281 (321)
T ss_dssp ------EECCCSSCEEEEEECTTSSEE-EEEETT---SCEEEEETTTTE
T ss_pred ------EEcCCCCceEEEEECCCCCEE-EEEeCC---CcEEEEeCCCCE
Confidence 111111112234566777744 444432 356777777665
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.011 Score=55.87 Aligned_cols=134 Identities=10% Similarity=0.127 Sum_probs=81.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
..+.+|++.++. ....+. ........++|||||++|+..... ..|.+.|+.+++....+....... ...|+||
T Consensus 144 g~v~i~~~~~~~--~~~~~~-~~~~~v~~~~~spdg~~lasg~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 217 (321)
T 3ow8_A 144 GKVNIFGVESGK--KEYSLD-TRGKFILSIAYSPDGKYLASGAID---GIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 217 (321)
T ss_dssp SEEEEEETTTCS--EEEEEE-CSSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCCCEEEECTT
T ss_pred CcEEEEEcCCCc--eeEEec-CCCceEEEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEcccCCceeEEEEcCC
Confidence 468888987652 333333 234456678999999998765433 458888998876233343333222 2459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+.|+.-+.+ ..+.+.|+.. +...-.+..... .+..+.|+++. .++....++ .+.+|++..
T Consensus 218 ~~~l~s~s~d-----g~i~iwd~~~-~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~D~--~v~iwd~~~ 279 (321)
T 3ow8_A 218 SQLLVTASDD-----GYIKIYDVQH-ANLAGTLSGHAS-WVLNVAFCPDDTHFVSSSSDK--SVKVWDVGT 279 (321)
T ss_dssp SCEEEEECTT-----SCEEEEETTT-CCEEEEECCCSS-CEEEEEECTTSSEEEEEETTS--CEEEEETTT
T ss_pred CCEEEEEcCC-----CeEEEEECCC-cceeEEEcCCCC-ceEEEEECCCCCEEEEEeCCC--cEEEEeCCC
Confidence 9876654432 3677888875 322223433333 47788998863 455555555 467888763
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.011 Score=57.66 Aligned_cols=187 Identities=7% Similarity=0.004 Sum_probs=101.1
Q ss_pred ceEEEEECCCCCC-----CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeee--ecccccee
Q 010654 8 DKAWLHKLEADQS-----NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL--TPRVVGVD 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~-----~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l--~~~~~~~~ 80 (505)
..|.+|++.++.. +....+... ......+.|+|||+.++++... ...|.+.|+.+++....+ ........
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGC--DNVILVWDVGTGAAVLTLGPDVHPDTIY 180 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEET--TSCEEEEETTTTEEEEEECTTTCCSCEE
T ss_pred CeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcC--CCEEEEEECCCCCccEEEecCCCCCceE
Confidence 4688999977532 223344432 3345578899999544444332 345888899887623333 22222222
Q ss_pred -EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEE-cCCCCceeeEEEEeCCEEEEEEe--cCCeeEEEEEEcCC
Q 010654 81 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI-PHRESVKLQDIQLFIDHLAVYER--EGGLQKITTYRLPA 156 (505)
Q Consensus 81 -~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~d~l~~~~~--~~~~~~l~~~~~~~ 156 (505)
..|+|||+.|+..+.+ ..|.++|+.. +.....+ .......+..+.|.++..+++.. ......+.+|++..
T Consensus 181 ~~~~~~~~~~l~~~~~d-----~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 181 SVDWSRDGALICTSCRD-----KRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp EEEECTTSSCEEEEETT-----SEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred EEEECCCCCEEEEEecC-----CcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 3499999988776643 3788899876 3332233 33333336678888875444433 12335688999864
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...... ...+.... .+..+.++++++.+++..+.. ..+.++++.+++
T Consensus 255 ~~~~~~------~~~~~~~~-~v~~~~~s~~~~~l~~~g~~d---g~i~i~d~~~~~ 301 (402)
T 2aq5_A 255 LEEPLS------LQELDTSS-GVLLPFFDPDTNIVYLCGKGD---SSIRYFEITSEA 301 (402)
T ss_dssp CSSCSE------EEECCCCS-SCEEEEEETTTTEEEEEETTC---SCEEEEEECSST
T ss_pred ccCCce------EEeccCCC-ceeEEEEcCCCCEEEEEEcCC---CeEEEEEecCCC
Confidence 221111 11111110 122234567777665554322 356666665554
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.02 Score=54.93 Aligned_cols=118 Identities=10% Similarity=0.037 Sum_probs=64.8
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCC-CCCceeeeecc-----cccee-EEeeeeCCEEEEEEcCCCCCCceEE
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVS-KPEELRVLTPR-----VVGVD-TAASHRGNHFFITRRSDELFNSELL 105 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~-~~~~~~~l~~~-----~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~ 105 (505)
...++.|||||++|++... ....|+++|++ +++ ++.+... ..+.. ..|||||+++|+....++ .-.++
T Consensus 146 ~~~~~~~spdG~~l~~~~~--~~~~v~~~~~~~~g~-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~--~v~v~ 220 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADL--TANKLWTHRKLASGE-VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN--RICEY 220 (365)
T ss_dssp CEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSC-EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT--EEEEE
T ss_pred cceEEEECCCCCEEEEEcC--CCCEEEEEEECCCCC-EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC--eEEEE
Confidence 4457889999999765432 23578888887 675 4433211 11222 349999999988765421 22444
Q ss_pred EeeCCCCCCce---EEE---cCCC-C-c-------eeeEEE-EeCCE-EEEEEecCCe----eEEEEEEcCC
Q 010654 106 ACPVDNTSETT---VLI---PHRE-S-V-------KLQDIQ-LFIDH-LAVYEREGGL----QKITTYRLPA 156 (505)
Q Consensus 106 ~~~~~~~~~~~---~~~---~~~~-~-~-------~i~~~~-~~~d~-l~~~~~~~~~----~~l~~~~~~~ 156 (505)
.++.++ +... ..+ +... . . .+..+. +++|+ .+++.+.+.. ..+.+|+++.
T Consensus 221 ~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~ 291 (365)
T 1jof_A 221 VIDPAT-HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp EECTTT-CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred EEeCCC-CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC
Confidence 445433 3221 012 1111 1 1 366788 88874 3334333221 1678888863
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.026 Score=53.50 Aligned_cols=185 Identities=14% Similarity=0.015 Sum_probs=102.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
..|.+|++.++ +....+.. .......++|+|||++|+.... ...|.+.|+.+++ ........... ...|+|+
T Consensus 54 g~i~vwd~~~~--~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~-~~~~~~~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 54 SSASVWYSLNG--ERLGTLDG-HTGTIWSIDVDCFTKYCVTGSA---DYSIKLWDVSNGQ-CVATWKSPVPVKRVEFSPC 126 (369)
T ss_dssp SCEEEEETTTC--CEEEEECC-CSSCEEEEEECTTSSEEEEEET---TTEEEEEETTTCC-EEEEEECSSCEEEEEECTT
T ss_pred CEEEEEeCCCc--hhhhhhhh-cCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCc-EEEEeecCCCeEEEEEccC
Confidence 46889998765 23334432 2334457889999998875543 3468889999886 33332222222 2349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCC-----------ceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSE-----------TTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~ 154 (505)
|+.++............+.++++..... ...+........+..+.|+++. .+++...++ .+.+|++
T Consensus 127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~ 204 (369)
T 3zwl_B 127 GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG--KISKYDV 204 (369)
T ss_dssp SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS--EEEEEET
T ss_pred CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC--EEEEEEC
Confidence 9998887754222234677777653211 1112222222257788888763 444555554 4778988
Q ss_pred CCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 155 PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...+..... +. .....+..+.+++++..++. .+. -..+.++++.+++
T Consensus 205 ~~~~~~~~~------~~--~~~~~v~~~~~~~~~~~l~~-~~~---d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 205 SNNYEYVDS------ID--LHEKSISDMQFSPDLTYFIT-SSR---DTNSFLVDVSTLQ 251 (369)
T ss_dssp TTTTEEEEE------EE--CCSSCEEEEEECTTSSEEEE-EET---TSEEEEEETTTCC
T ss_pred CCCcEeEEE------Ee--cCCCceeEEEECCCCCEEEE-ecC---CceEEEEECCCCc
Confidence 642221111 11 11111223455677775543 332 2467888877665
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0045 Score=63.32 Aligned_cols=196 Identities=10% Similarity=0.040 Sum_probs=102.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-----cc-cceeE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-----RV-VGVDT 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~~-~~~~~ 81 (505)
.+|+++++.+.. ...+..-....+..+..|||||+++++..+. .+.|.++|+++++ +....+ +. .+. .
T Consensus 302 g~i~vvd~~~~~--~l~~~~i~~~~~~~~~~~spdg~~l~va~~~--~~~v~v~D~~tg~-l~~~i~~g~~ph~g~g~-~ 375 (543)
T 1nir_A 302 GKVLLVNYKDID--NLTVTSIGAAPFLHDGGWDSSHRYFMTAANN--SNKVAVIDSKDRR-LSALVDVGKTPHPGRGA-N 375 (543)
T ss_dssp TEEEEEECTTSS--SCEEEEEECCSSCCCEEECTTSCEEEEEEGG--GTEEEEEETTTTE-EEEEEECSSSBCCTTCE-E
T ss_pred CeEEEEEecCCC--cceeEEeccCcCccCceECCCCCEEEEEecC--CCeEEEEECCCCe-EEEeeccCCCCCCCCCc-c
Confidence 468888886642 1122111123344467899999998665433 3468889999986 433222 11 111 2
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC--CceE----EEcCCCCceeeEEEEeCCEEEEEEec--CC----eeEE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTS--ETTV----LIPHRESVKLQDIQLFIDHLAVYERE--GG----LQKI 149 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~----~~~~~~~~~i~~~~~~~d~l~~~~~~--~~----~~~l 149 (505)
.++|+++.+|.....+. ..|.+++.+..+ ...| .+...... ...+..++|+-.+.... +. ...+
T Consensus 376 ~~~p~~g~~~~s~~~~d---~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-~~~v~~~pdg~~l~v~~~~~~~~~~~~~v 451 (543)
T 1nir_A 376 FVHPKYGPVWSTSHLGD---GSISLIGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKSSHLYVDTTFNPDARISQSV 451 (543)
T ss_dssp EEETTTEEEEEEEBSSS---SEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCCEEEECCTTCSSHHHHTCE
T ss_pred cCCCCCccEEEeccCCC---ceEEEEEeCCCCCchhcCeEEEEEEcCCCC-ceEEEcCCCCCcEEEecCCCCCcccCceE
Confidence 25788788777664321 367777875411 0112 23322221 23455666643333321 21 3368
Q ss_pred EEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec-CCCCceEEEEECCCCc
Q 010654 150 TTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS-LRTPPSVYDYDMDMGI 213 (505)
Q Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~ 213 (505)
.+|++.+.....+.|.-+.--.+++....+..+.++++|+.++++.-+ -.....|.++|.++++
T Consensus 452 ~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 452 AVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred EEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 899987522111211000000011211112224678899999988744 3567889999988887
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0014 Score=63.08 Aligned_cols=184 Identities=13% Similarity=0.058 Sum_probs=96.0
Q ss_pred eEEEEECCCCCCCCeEEEEe-cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 9 KAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
.|.+||+.+++......+.. ........++|||||++|+.... ...|.+.|+.+++....+........ ..|+++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 47788887653322222221 12234457889999999865433 23478889988762333333332222 348999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
++.+++....+ ..+.+.|+........+........+..+.|+++ .++.+...++ .+.+|++.. +.....
T Consensus 193 ~~~~~~s~~~d----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~--~i~~wd~~~-~~~~~~- 264 (357)
T 4g56_B 193 KDTIFLSCGED----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG--NVSLVNIKN-PDSAQT- 264 (357)
T ss_dssp CSSCEEEEETT----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS--CEEEEESSC-GGGCEE-
T ss_pred CCceeeeeccC----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc--ceeEEECCC-CcEeEE-
Confidence 87666555443 3677888865222221111223345678888764 4555555554 467888763 221211
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+. .....+..+.++++++.++++.+.. ..+.+.+..+++
T Consensus 265 -----~~--~~~~~v~~l~~sp~~~~~lasgs~D---~~i~iwd~~~~~ 303 (357)
T 4g56_B 265 -----SA--VHSQNITGLAYSYHSSPFLASISED---CTVAVLDADFSE 303 (357)
T ss_dssp -----EC--CCSSCEEEEEECSSSSCCEEEEETT---SCEEEECTTSCE
T ss_pred -----Ee--ccceeEEEEEEcCCCCCEEEEEeCC---CEEEEEECCCCc
Confidence 11 1111122345677777676666543 357777877665
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.34 E-value=0.049 Score=50.52 Aligned_cols=183 Identities=11% Similarity=0.046 Sum_probs=95.7
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc---c---e
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV---G---V 79 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~---~---~ 79 (505)
...+|++++..++. ...+.. +.....+.++|||+.+ +.. ...|+++|.++++ .+.+..... . .
T Consensus 33 ~~~~i~~~d~~~~~---~~~~~~--~~~~~~i~~~~dG~l~-v~~----~~~l~~~d~~~g~-~~~~~~~~~~~~~~~~~ 101 (297)
T 3g4e_A 33 PAKKVCRWDSFTKQ---VQRVTM--DAPVSSVALRQSGGYV-ATI----GTKFCALNWKEQS-AVVLATVDNDKKNNRFN 101 (297)
T ss_dssp TTTEEEEEETTTCC---EEEEEC--SSCEEEEEEBTTSSEE-EEE----TTEEEEEETTTTE-EEEEEECCTTCSSEEEE
T ss_pred CCCEEEEEECCCCc---EEEEeC--CCceEEEEECCCCCEE-EEE----CCeEEEEECCCCc-EEEEEecCCCCCCCCCC
Confidence 34568888876542 233332 2334467899999943 333 3579999999886 665543211 1 1
Q ss_pred eEEeeeeCCEEEEEEcCCC-------CCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEE
Q 010654 80 DTAASHRGNHFFITRRSDE-------LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKIT 150 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~ 150 (505)
...++|||+ ||+.+.... .....||+++.++ ....+.. ... ...++.|++|. ++++.... .+++
T Consensus 102 di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~~~~~~~-~~~-~pngi~~spdg~~lyv~~~~~--~~i~ 174 (297)
T 3g4e_A 102 DGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH--HVKKYFD-QVD-ISNGLDWSLDHKIFYYIDSLS--YSVD 174 (297)
T ss_dssp EEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS--CEEEEEE-EES-BEEEEEECTTSCEEEEEEGGG--TEEE
T ss_pred CEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC--CEEEEee-ccc-cccceEEcCCCCEEEEecCCC--CcEE
Confidence 233889987 676653311 1346899998753 2221222 112 24578888764 44443333 4577
Q ss_pred EEEcCCCCCcccccCCCce-eeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 151 TYRLPAVGEPLKSLQGGKS-VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 151 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++++...+.+.. .+. ..++.......++..+.++. +++.... ...|+++++.+++
T Consensus 175 ~~~~d~~~G~~~~---~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~---~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 175 AFDYDLQTGQISN---RRSVYKLEKEEQIPDGMCIDAEGK-LWVACYN---GGRVIRLDPVTGK 231 (297)
T ss_dssp EEEECTTTCCEEE---EEEEEECCGGGCEEEEEEEBTTSC-EEEEEET---TTEEEEECTTTCC
T ss_pred EEeccCCCCcccC---cEEEEECCCCCCCCCeeEECCCCC-EEEEEcC---CCEEEEEcCCCce
Confidence 7877422221110 011 11111111112233455654 5554432 2468888887666
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.015 Score=56.65 Aligned_cols=184 Identities=11% Similarity=0.038 Sum_probs=101.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
...|.+|++.+.. .....+.. .......+.|+|||++|+..... ..|.++|+.++.....+....... ...|+|
T Consensus 195 dg~i~i~d~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p 269 (401)
T 4aez_A 195 SGAIHHHDVRIAN-HQIGTLQG-HSSEVCGLAWRSDGLQLASGGND---NVVQIWDARSSIPKFTKTNHNAAVKAVAWCP 269 (401)
T ss_dssp TSEEEEEETTSSS-CEEEEEEC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETTCSSEEEEECCCSSCCCEEEECT
T ss_pred CCCEEEEecccCc-ceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCC---CeEEEccCCCCCccEEecCCcceEEEEEECC
Confidence 3568899987542 23333332 23345578899999988765443 468889998876233333333222 245999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEE-e--cCCeeEEEEEEcCCCCCccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE-R--EGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~-~--~~~~~~l~~~~~~~~~~~~~ 162 (505)
+++.++..... .....|.++|+.+ +.....+.. ...+..+.|++++-.++. . .++ .+.+|++.. +. ..
T Consensus 270 ~~~~ll~~~~g--s~d~~i~i~d~~~-~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~-~~-~~ 340 (401)
T 4aez_A 270 WQSNLLATGGG--TMDKQIHFWNAAT-GARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSS-SG-LT 340 (401)
T ss_dssp TSTTEEEEECC--TTTCEEEEEETTT-CCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTC--EEEEEEEET-TE-EE
T ss_pred CCCCEEEEecC--CCCCEEEEEECCC-CCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCC--cEEEEecCC-cc-ce
Confidence 99888877641 1224889999876 433324433 234788999887433333 2 343 577788763 11 11
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
....++.....+..+.+++++..+ ++.+. -..+.+.++.+++
T Consensus 341 -----~~~~~~~h~~~v~~~~~s~dg~~l-~s~~~---dg~i~iw~~~~~~ 382 (401)
T 4aez_A 341 -----KQVDIPAHDTRVLYSALSPDGRIL-STAAS---DENLKFWRVYDGD 382 (401)
T ss_dssp -----EEEEEECCSSCCCEEEECTTSSEE-EEECT---TSEEEEEECCC--
T ss_pred -----eEEEecCCCCCEEEEEECCCCCEE-EEEeC---CCcEEEEECCCCc
Confidence 111121211122234566777744 34432 2467777776654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.035 Score=54.95 Aligned_cols=188 Identities=5% Similarity=-0.040 Sum_probs=101.5
Q ss_pred ceEEEEECCCCCCCC--eEEEEecCCceEEEEEEeCC---CcEEEEEeccccceEEEEEeCCCCCceee-eecccccee-
Q 010654 8 DKAWLHKLEADQSND--ICLYHEKDDIYSLGLQASES---KKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGVD- 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~--~~~~~~~~~~~~~~~~~SpD---g~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~~~~~~- 80 (505)
..++.|++.+..... ...+... ......+.|+|| |++|+.... ...|+++|+.++..... +........
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGH-VSMLTDVHLIKDSDGHQFIITSDR---DEHIKISHYPQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEEC-SSCEEEEEEEECTTSCEEEEEEET---TSCEEEEEESCTTCEEEECCCCSSCEEE
T ss_pred CcEEEEecCCcccccccceeeecc-cCceEEEEEcCCCCCCcEEEEEcC---CCcEEEEECCCCceeeeeecCCCCceEE
Confidence 458889886653221 1122222 223456789999 887765443 24578888877752333 222332222
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC------------------------CCCceeeEEEEeCCE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH------------------------RESVKLQDIQLFIDH 136 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------------------~~~~~i~~~~~~~d~ 136 (505)
..|+ ||+.|+..+.+ ..|.++|+.+ +.....+.. .....+..+.|.++.
T Consensus 247 ~~~s-d~~~l~s~~~d-----~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGGD-----DKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp EEEC-STTEEEEEESS-----SEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred EEEC-CCCEEEEEeCC-----CeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 3488 99888766533 3788888876 322112221 223457788888764
Q ss_pred EEEEEecCCeeEEEEEEc-CCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc------eEEEEEC
Q 010654 137 LAVYEREGGLQKITTYRL-PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP------SVYDYDM 209 (505)
Q Consensus 137 l~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~ 209 (505)
-++++.......+.+|++ +..+..+..+ ..+..... +..+.+++ +.+++...+...|. ++|.++.
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~---~~~~~~~~---v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALK---QIITFPYN---VISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEE---EEEECSSC---EEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeec---cEeccCCc---eEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEc
Confidence 333322222245788888 2222222111 12222211 22233444 45777888877775 8999988
Q ss_pred CCCcE
Q 010654 210 DMGIS 214 (505)
Q Consensus 210 ~~~~~ 214 (505)
.+++.
T Consensus 392 ~~~~~ 396 (450)
T 2vdu_B 392 NENSF 396 (450)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 77763
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0044 Score=59.26 Aligned_cols=167 Identities=8% Similarity=0.003 Sum_probs=92.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc---eeEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~---~~~~~s 84 (505)
..|.+||+.++ +....+.+ .........|+||++.++++... ...|.+.|+.+++....+.....+ ....|+
T Consensus 149 ~~i~iwd~~~~--~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 149 ICIKVWDLAQQ--VVLSSYRA-HAAQVTCVAASPHKDSVFLSCSE--DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp SCEEEEETTTT--EEEEEECC-CSSCEEEEEECSSCTTEEEEEET--TSCEEEEETTSSSCEEECC----CCCEEEEEEC
T ss_pred CeEEEEECCCC--cEEEEEcC-cCCceEEEEecCCCCCceeeecc--ccccccccccccceeeeeecceeeccceeeeec
Confidence 45889999774 23333432 22344567899999876665433 235778899887633333322222 123488
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|++..++.....+ ..|.++|+.+ +.....+..... .+..+.|+++ .+++....++. +.+|++.. +.+
T Consensus 224 p~~~~~l~sg~~d----g~v~~wd~~~-~~~~~~~~~h~~-~v~~v~fsp~g~~~lasgs~D~~--i~vwd~~~--~~~- 292 (344)
T 4gqb_B 224 PQQSEVFVFGDEN----GTVSLVDTKS-TSCVLSSAVHSQ-CVTGLVFSPHSVPFLASLSEDCS--LAVLDSSL--SEL- 292 (344)
T ss_dssp SSCTTEEEEEETT----SEEEEEESCC---CCEEEECCSS-CEEEEEECSSSSCCEEEEETTSC--EEEECTTC--CEE-
T ss_pred CCCCcceEEeccC----CcEEEEECCC-CcEEEEEcCCCC-CEEEEEEccCCCeEEEEEeCCCe--EEEEECCC--CcE-
Confidence 8777666655442 3788889876 333223443333 4778888876 35556666654 67788753 211
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
+.+......+..+.++++++.++.+++.
T Consensus 293 -------~~~~~H~~~V~~v~~sp~~~~llas~s~ 320 (344)
T 4gqb_B 293 -------FRSQAHRDFVRDATWSPLNHSLLTTVGW 320 (344)
T ss_dssp -------EEECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred -------EEEcCCCCCEEEEEEeCCCCeEEEEEcC
Confidence 1221111123334567777777666653
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=97.21 E-value=0.093 Score=48.71 Aligned_cols=179 Identities=13% Similarity=0.048 Sum_probs=100.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..+.+|++.++ +....+... ..-...+.|+|||++|+.... ...|.+.|+.+++....+........ ..|+|+
T Consensus 45 g~i~iw~~~~~--~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 45 KLIKIWGAYDG--KFEKTISGH-KLGISDVAWSSDSNLLVSASD---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp SCEEEEETTTC--CEEEEECCC-SSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred CeEEEEeCCCc--ccchhhccC-CCceEEEEEcCCCCEEEEECC---CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 35778888654 233333322 223446889999998876543 34688889988762334433332222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQ 165 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 165 (505)
++.|+.-+.+ ..+.+.|+.. +.....+.... ..+..+.|+++. ++++...++ .+.+|++.. +.....+.
T Consensus 119 ~~~l~s~~~d-----~~i~iwd~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~-~~~~~~~~ 188 (312)
T 4ery_A 119 SNLIVSGSFD-----ESVRIWDVKT-GKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDG--LCRIWDTAS-GQCLKTLI 188 (312)
T ss_dssp SSEEEEEETT-----SCEEEEETTT-CCEEEEECCCS-SCEEEEEECTTSSEEEEEETTS--CEEEEETTT-CCEEEEEC
T ss_pred CCEEEEEeCC-----CcEEEEECCC-CEEEEEecCCC-CcEEEEEEcCCCCEEEEEeCCC--cEEEEECCC-CceeeEEe
Confidence 9887765543 3688889876 33322444333 347788898763 555555555 467888763 22121111
Q ss_pred CCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 166 GGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. .....+..+.+++++..++. .+. -..+.++++.+++
T Consensus 189 ~-------~~~~~~~~~~~~~~~~~l~~-~~~---d~~i~iwd~~~~~ 225 (312)
T 4ery_A 189 D-------DDNPPVSFVKFSPNGKYILA-ATL---DNTLKLWDYSKGK 225 (312)
T ss_dssp C-------SSCCCEEEEEECTTSSEEEE-EET---TTEEEEEETTTTE
T ss_pred c-------cCCCceEEEEECCCCCEEEE-EcC---CCeEEEEECCCCc
Confidence 0 00001122345677775543 332 2467888887765
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.038 Score=56.58 Aligned_cols=182 Identities=11% Similarity=-0.006 Sum_probs=94.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC--CCCceeeeeccccceeEEee-
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS--KPEELRVLTPRVVGVDTAAS- 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~--~~~~~~~l~~~~~~~~~~~s- 84 (505)
..|+++|..|.+ ....+.. ....-.+.+||||+++++.. ....|+++|+. +++....+.....-....+|
T Consensus 177 ~~V~viD~~t~~--v~~~i~~--g~~p~~v~~SpDGr~lyv~~---~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 177 GQIALIDGSTYE--IKTVLDT--GYAVHISRLSASGRYLFVIG---RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TEEEEEETTTCC--EEEEEEC--SSCEEEEEECTTSCEEEEEE---TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECC
T ss_pred CeEEEEECCCCe--EEEEEeC--CCCccceEECCCCCEEEEEc---CCCeEEEEECCCCCCcEeEEEecCCCCceeEEcc
Confidence 467888876642 2222221 11222678999999987653 23579999996 55423333322211223489
Q ss_pred ---eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC---C-------CceeeEEEEeCC-EEEEEEecCCeeEEE
Q 010654 85 ---HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR---E-------SVKLQDIQLFID-HLAVYEREGGLQKIT 150 (505)
Q Consensus 85 ---~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~-------~~~i~~~~~~~d-~l~~~~~~~~~~~l~ 150 (505)
|||+++|+..... ..+.++|..+. +....+.-. . ...+..+..+.+ ..+++.. ....++.
T Consensus 250 ~~~pDGk~l~v~n~~~----~~v~ViD~~t~-~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~~g~v~ 323 (567)
T 1qks_A 250 MEGWEDKYAIAGAYWP----PQYVIMDGETL-EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KETGKIL 323 (567)
T ss_dssp STTCTTTEEEEEEEET----TEEEEEETTTC-CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TTTTEEE
T ss_pred ccCCCCCEEEEEEccC----CeEEEEECCCC-cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cCCCeEE
Confidence 6999998886542 37888887652 222122211 0 112344554554 2222222 2334677
Q ss_pred EEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 151 TYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++... ..... + ..+. ...+ ..+..++++++.+++.... ...+..+|..+++
T Consensus 324 ~vd~~~-~~~~~-v---~~i~--~~~~-~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~k 375 (567)
T 1qks_A 324 LVDYTD-LNNLK-T---TEIS--AERF-LHDGGLDGSHRYFITAANA---RNKLVVIDTKEGK 375 (567)
T ss_dssp EEETTC-SSEEE-E---EEEE--CCSS-EEEEEECTTSCEEEEEEGG---GTEEEEEETTTTE
T ss_pred EEecCC-Cccce-e---eeee--cccc-ccCceECCCCCEEEEEeCC---CCeEEEEECCCCc
Confidence 777642 11100 0 0111 1111 1223467888876665543 3468889998876
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.056 Score=50.78 Aligned_cols=186 Identities=10% Similarity=0.055 Sum_probs=97.3
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEecc---ccceEEEEEeCCCCCceeeeeccccce-eEE
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASES---KITRFVFYLDVSKPEELRVLTPRVVGV-DTA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~ 82 (505)
..|++++..++. ...++... ......++.++|||+.++..... .....||++|.++++ .+.+....... ...
T Consensus 112 ~~i~~~d~~~~~--~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~ 188 (333)
T 2dg1_A 112 GGIFAATENGDN--LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISVANGIA 188 (333)
T ss_dssp CEEEEECTTSCS--CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESSEEEEE
T ss_pred ceEEEEeCCCCE--EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-EEEeecCCCcccceE
Confidence 468888876542 22233211 12234467899999754432211 124689999998775 65554322121 234
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc-e-----EEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSET-T-----VLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~-----~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+|||+.+|+.... ...|+++++...+.. . ..........+..+.+++++ +++....++ .+.+++.+
T Consensus 189 ~~~dg~~l~v~~~~----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~--~v~~~d~~ 262 (333)
T 2dg1_A 189 LSTDEKVLWVTETT----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG--RVLVFNKR 262 (333)
T ss_dssp ECTTSSEEEEEEGG----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT--EEEEECTT
T ss_pred ECCCCCEEEEEeCC----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC--EEEEECCC
Confidence 89999999887643 248888888531221 1 01111111346678888765 444433333 46677653
Q ss_pred CCCCcccccCCCceeeccCCe-e---eecCCCCcccCCEEEEEEecC--CCCceEEEEECC
Q 010654 156 AVGEPLKSLQGGKSVEFIDPV-Y---SIDPSESVFSSRILRFHYSSL--RTPPSVYDYDMD 210 (505)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~ 210 (505)
+.... .+..+... . .+..+.++++++.++++.+.- .....||+++..
T Consensus 263 --g~~~~------~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 263 --GYPIG------QILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp --SCEEE------EEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred --CCEEE------EEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 43222 12222110 0 011223456777777666553 234467777654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0031 Score=59.81 Aligned_cols=155 Identities=8% Similarity=0.109 Sum_probs=84.1
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
+.++++++.++.... ...|+++|+++++..+.+.... ......|+|||+.+++....+ ..|+++|+++ ++
T Consensus 5 ~~~~~~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~----~~i~~~d~~t-~~ 76 (349)
T 1jmx_B 5 PALKAGHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY----GDIYGIDLDT-CK 76 (349)
T ss_dssp CCCCTTCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT----TEEEEEETTT-TE
T ss_pred ccccCCCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC----CcEEEEeCCC-Cc
Confidence 456777765543322 4579999999886222332221 112345999999888876432 4899999876 43
Q ss_pred ceEEEcCCC-----CceeeEEEEeCC--EEEEEEec---------CCeeEEEEEEcCCCCCcccccCCCceeeccCCeee
Q 010654 115 TTVLIPHRE-----SVKLQDIQLFID--HLAVYERE---------GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS 178 (505)
Q Consensus 115 ~~~~~~~~~-----~~~i~~~~~~~d--~l~~~~~~---------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 178 (505)
....+.... ...+..+.+++| .+++.... .....+.++++.+ +...+.+ .....+. .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~---~~~~~~~---~ 149 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD-GLEAKPV---RTFPMPR---Q 149 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG-GGGBCCS---EEEECCS---S
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC-cccccee---eeccCCC---c
Confidence 333333211 122456778776 44444432 0124688898763 2111111 1111111 1
Q ss_pred ecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 179 IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+..+.++++++ +++ .+ ..++++++.+++
T Consensus 150 ~~~~~~s~dg~-l~~-~~-----~~i~~~d~~~~~ 177 (349)
T 1jmx_B 150 VYLMRAADDGS-LYV-AG-----PDIYKMDVKTGK 177 (349)
T ss_dssp CCCEEECTTSC-EEE-ES-----SSEEEECTTTCC
T ss_pred ccceeECCCCc-EEE-cc-----CcEEEEeCCCCc
Confidence 22234678888 554 22 238999988776
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.12 Score=46.53 Aligned_cols=160 Identities=6% Similarity=-0.005 Sum_probs=88.2
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
..|.-++.++ || .|+.+......+.|.++|+++++..+.+. -...... .+.++|++||.++..+ ..++++|.
T Consensus 42 ~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~~~FgeGit~~g~~ly~ltw~~----~~v~v~D~ 114 (262)
T 3nol_A 42 KAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIE-LGKRYFGEGISDWKDKIVGLTWKN----GLGFVWNI 114 (262)
T ss_dssp TCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESSS----SEEEEEET
T ss_pred CcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEe-cCCccceeEEEEeCCEEEEEEeeC----CEEEEEEC
Confidence 3477788888 66 56655555567899999999997222222 1111111 2778999999997642 48999999
Q ss_pred CCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCC-CcccC
Q 010654 110 DNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFSS 188 (505)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 188 (505)
+++.... .++...+. -+++++++.++.. ++..+++++|..+ ..... .+........+..++ +.+.+
T Consensus 115 ~t~~~~~-ti~~~~eG--~glt~dg~~L~~S---dGs~~i~~iDp~T-~~v~~------~I~V~~~g~~~~~lNELe~~~ 181 (262)
T 3nol_A 115 RNLRQVR-SFNYDGEG--WGLTHNDQYLIMS---DGTPVLRFLDPES-LTPVR------TITVTAHGEELPELNELEWVD 181 (262)
T ss_dssp TTCCEEE-EEECSSCC--CCEEECSSCEEEC---CSSSEEEEECTTT-CSEEE------EEECEETTEECCCEEEEEEET
T ss_pred ccCcEEE-EEECCCCc--eEEecCCCEEEEE---CCCCeEEEEcCCC-CeEEE------EEEeccCCccccccceeEEEC
Confidence 8743222 33332221 2455555555554 2456788887553 22121 222211000011100 11224
Q ss_pred CEEEEEEecCCCCceEEEEECCCCc
Q 010654 189 RILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 189 ~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.+++... ....|.++|+++++
T Consensus 182 G~lyan~w---~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 182 GEIFANVW---QTNKIVRIDPETGK 203 (262)
T ss_dssp TEEEEEET---TSSEEEEECTTTCB
T ss_pred CEEEEEEc---cCCeEEEEECCCCc
Confidence 55554432 23589999999998
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.12 Score=49.52 Aligned_cols=180 Identities=10% Similarity=0.027 Sum_probs=101.3
Q ss_pred ceEEEEECCCCCCCCeEEEEe-cCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccc---cce-eE
Q 010654 8 DKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV---VGV-DT 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~-~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~---~~~-~~ 81 (505)
..|.+|++.++. ...++.. ....-...+.|+| |+++|+.... ...|.+.|+.+.. .+.+.... ... ..
T Consensus 96 g~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~ 169 (383)
T 3ei3_B 96 GDIILWDYDVQN--KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI---RGATTLRDFSGSV-IQVFAKTDSWDYWYCCV 169 (383)
T ss_dssp SCEEEEETTSTT--CEEEECCCSTTCBEEEEEEETTEEEEEEEEET---TTEEEEEETTSCE-EEEEECCCCSSCCEEEE
T ss_pred CeEEEEeCCCcc--cceeeecCCcCCceeEEEeCCCCCCEEEEEeC---CCEEEEEECCCCc-eEEEeccCCCCCCeEEE
Confidence 468899997653 3344432 2333455788999 5666554433 3467888888754 55554332 112 23
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
.|+|+++.|+..+.+ ..+.++|+.+ .....+..... .+..+.|+++. ++++...++ .+.+|++.....
T Consensus 170 ~~~~~~~~l~~~~~d-----~~i~i~d~~~--~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~ 239 (383)
T 3ei3_B 170 DVSVSRQMLATGDST-----GRLLLLGLDG--HEIFKEKLHKA-KVTHAEFNPRCDWLMATSSVDA--TVKLWDLRNIKD 239 (383)
T ss_dssp EEETTTTEEEEEETT-----SEEEEEETTS--CEEEEEECSSS-CEEEEEECSSCTTEEEEEETTS--EEEEEEGGGCCS
T ss_pred EECCCCCEEEEECCC-----CCEEEEECCC--CEEEEeccCCC-cEEEEEECCCCCCEEEEEeCCC--EEEEEeCCCCCc
Confidence 499999987766543 3788889853 33323443333 57889999874 666666665 467888864211
Q ss_pred cccccCCCceeeccCCeeeecCCCCcc-cCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 160 PLKSLQGGKSVEFIDPVYSIDPSESVF-SSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.. ..+........+..+.+++ ++..++ +.+. -..+.++++.+++
T Consensus 240 ~~------~~~~~~~~~~~v~~~~~s~~~~~~l~-~~~~---d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 240 KN------SYIAEMPHEKPVNAAYFNPTDSTKLL-TTDQ---RNEIRVYSSYDWS 284 (383)
T ss_dssp TT------CEEEEEECSSCEEEEEECTTTSCEEE-EEES---SSEEEEEETTBTT
T ss_pred cc------ceEEEecCCCceEEEEEcCCCCCEEE-EEcC---CCcEEEEECCCCc
Confidence 11 1111001111123345667 666544 4432 2567788877654
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.12 Score=49.80 Aligned_cols=30 Identities=7% Similarity=-0.190 Sum_probs=23.3
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPE 67 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~ 67 (505)
++.|||||++|++.... ..+.|+++| ++++
T Consensus 129 ~~~~spDG~~l~v~n~~-~~~~v~viD-~t~~ 158 (373)
T 2mad_H 129 MNANTPNNADLLFFQFA-AGPAVGLVV-QGGS 158 (373)
T ss_pred ceEECCCCCEEEEEecC-CCCeEEEEE-CCCC
Confidence 57899999998876432 246799999 8886
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.006 Score=55.40 Aligned_cols=140 Identities=10% Similarity=0.017 Sum_probs=76.1
Q ss_pred EEEEECCCCceeeEEEEEeC-CccCCCCCCcEEEEEcCCCCcCCCC-CCch----------------hHHHHHHCCcEEE
Q 010654 235 RKWASASDGTQIPICIVYRK-NLVKLDGSDPLLLYGYGSYEICNDP-AFNS----------------SRLSLLDRGFIFA 296 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~-~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~----------------~~~~l~~~G~~v~ 296 (505)
.+.+....|..+..|++ .. .. .....|++++++||||.+... +... ....|.+. ..++
T Consensus 28 yv~v~~~~~~~lFywf~-es~~~--~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~-anll 103 (270)
T 1gxs_A 28 YVTIDDNNGRALYYWFQ-EADTA--DPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKA-ANIL 103 (270)
T ss_dssp EEEEETTTTEEEEEEEE-CCCSS--CGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGT-SEEE
T ss_pred EEEcCCCCCcEEEEEEE-EecCC--CCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhcc-ccEE
Confidence 34444445667776644 43 22 235689999999999876542 1100 00123332 5788
Q ss_pred EEcc-cCCCCCchhHHHcccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHH--hhCC-----Cce
Q 010654 297 IAQI-RGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVL--NMRP-----DLF 367 (505)
Q Consensus 297 ~~d~-rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~--~~~p-----~~~ 367 (505)
.+|. .|.|-+-.. ........-.....|+..+++ |+...+......+.|+|.| |=|+...+. .++. =-+
T Consensus 104 fiDqPvGtGfSy~~-~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inL 181 (270)
T 1gxs_A 104 FAESPAGVGFSYSN-TSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINF 181 (270)
T ss_dssp EECCSTTSTTCEES-SGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEE
T ss_pred EEeccccccccCCC-CCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceee
Confidence 8894 555532111 001110111123566666665 4444454555689999999 655432221 1121 247
Q ss_pred eEEEecCCchhhh
Q 010654 368 KAAVAAVPFVDVL 380 (505)
Q Consensus 368 ~a~v~~~~~~d~~ 380 (505)
++++...|++|..
T Consensus 182 kGi~ign~~~d~~ 194 (270)
T 1gxs_A 182 QGLLVSSGLTNDH 194 (270)
T ss_dssp EEEEEESCCCBHH
T ss_pred eeEEEeCCccChh
Confidence 8999999998864
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.053 Score=57.99 Aligned_cols=112 Identities=9% Similarity=0.080 Sum_probs=74.1
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
....++|||||++|+.... ...|.++|+.++.....+........ ..|+|||+.|+..+.. ..|.++++.+
T Consensus 15 ~v~~i~~sp~~~~la~~~~---~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~ 86 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY---SGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNT 86 (814)
T ss_dssp CEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEeC---CCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCC
Confidence 3457889999999887653 34688899988763444443332332 3499999998887753 3788889876
Q ss_pred CCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 112 TSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
+.....+..... .+..+.|++++ .+++...++ .+.+|++..
T Consensus 87 -~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg--~i~vw~~~~ 128 (814)
T 3mkq_A 87 -GEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDL--TVKLWNWEN 128 (814)
T ss_dssp -CCEEEEEECCSS-CEEEEEECSSSSEEEEEETTS--EEEEEEGGG
T ss_pred -CcEEEEEecCCC-CEEEEEEeCCCCEEEEEcCCC--EEEEEECCC
Confidence 433334443333 47889998874 445555555 467788764
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.1 Score=55.81 Aligned_cols=136 Identities=7% Similarity=-0.019 Sum_probs=85.0
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
...|.+|++.++. ....+.. .......+.|||||++|+.... ...|.+.|+.+++....+........ ..|+|
T Consensus 34 ~g~v~iwd~~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~ 107 (814)
T 3mkq_A 34 SGRVEIWNYETQV--EVRSIQV-TETPVRAGKFIARKNWIIVGSD---DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP 107 (814)
T ss_dssp TSEEEEEETTTTE--EEEEEEC-CSSCEEEEEEEGGGTEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred CCEEEEEECCCCc--eEEEEec-CCCcEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEecCCCCEEEEEEeC
Confidence 3468899997752 3333432 2334457899999999877644 45688999988863344443333332 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC-C-EEEEEEecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+|+.|+..+.+ ..+.++++.+.......+.... ..+..+.|++ + ..+++...++ .+.+|++..
T Consensus 108 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~dg--~v~vwd~~~ 172 (814)
T 3mkq_A 108 TKPYVLSGSDD-----LTVKLWNWENNWALEQTFEGHE-HFVMCVAFNPKDPSTFASGCLDR--TVKVWSLGQ 172 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEEGGGTSEEEEEEECCS-SCEEEEEEETTEEEEEEEEETTS--EEEEEETTC
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCceEEEEEcCCC-CcEEEEEEEcCCCCEEEEEeCCC--eEEEEECCC
Confidence 99988866543 3677778765212221343332 3477899998 5 4555666665 477888763
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.25 Score=46.59 Aligned_cols=113 Identities=10% Similarity=0.006 Sum_probs=70.5
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
-...++|||||++|+.... ...|.++|+.+++....+........ ..|+|+|+.|+..+.+ ..|.++++.+
T Consensus 34 ~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~ 105 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSK---DSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSN 105 (369)
T ss_dssp CEEEEEECTTSCEEEEEES---SSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTT
T ss_pred eEEEEEEcCCCCEEEEEeC---CCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCC
Confidence 4457889999998876543 34688889888763344443333332 3499999988766543 3788889876
Q ss_pred CCCceEEEcCCCCceeeEEEEeCCE-EEEEEecC---CeeEEEEEEcCC
Q 010654 112 TSETTVLIPHRESVKLQDIQLFIDH-LAVYEREG---GLQKITTYRLPA 156 (505)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~---~~~~l~~~~~~~ 156 (505)
+.....+. ....+..+.|+++. .+++...+ ....+.+|++..
T Consensus 106 -~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 106 -GQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp -CCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEE
T ss_pred -CcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecC
Confidence 33333444 23357788898874 33333333 123567777753
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.049 Score=52.99 Aligned_cols=111 Identities=9% Similarity=0.064 Sum_probs=66.0
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc-ccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
+.|||||++|+.... ...|.++|+.++.....+... .... ...|+|+|+.+++....+ ..|.++|+.....
T Consensus 253 ~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d----g~i~vwd~~~~~~ 325 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHV---SGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN----GMLAQWDLRSPEC 325 (420)
T ss_dssp TCSSCTTEEEEEEET---TSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT----SEEEEEETTCTTS
T ss_pred eEEcCCCCEEEEEcC---CCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC----CeEEEEEcCCCcC
Confidence 357899998866543 335888999887623333222 2122 234999998444444332 3788899876322
Q ss_pred ceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 115 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
....+.......+..+.+.++.++++...++ .+.+|++..
T Consensus 326 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~--~v~iw~~~~ 365 (420)
T 3vl1_A 326 PVGEFLINEGTPINNVYFAAGALFVSSGFDT--SIKLDIISD 365 (420)
T ss_dssp CSEEEEESTTSCEEEEEEETTEEEEEETTTE--EEEEEEECC
T ss_pred chhhhhccCCCCceEEEeCCCCEEEEecCCc--cEEEEeccC
Confidence 1223332233357777777777777776665 466777764
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.14 Score=47.48 Aligned_cols=120 Identities=8% Similarity=0.076 Sum_probs=74.1
Q ss_pred EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCc
Q 010654 24 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNS 102 (505)
Q Consensus 24 ~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~ 102 (505)
..+.+.. +-...++|||||++|+.... ...+.+.|+.++...+.+........ ..|+|+++.|+.-+.+ .
T Consensus 7 ~~~~~h~-~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~ 77 (304)
T 2ynn_A 7 KTFSNRS-DRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----F 77 (304)
T ss_dssp EEEEEEC-SCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----S
T ss_pred EeecCCC-CceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-----C
Confidence 3454432 23447789999998775443 34577889888753444443332222 3499999987766543 3
Q ss_pred eEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 103 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
.+.+.|+.+ +.....+....+ .+..+.+.++. ++++...++. +.+|++..
T Consensus 78 ~i~vwd~~~-~~~~~~~~~h~~-~v~~~~~~~~~~~l~sgs~D~~--v~lWd~~~ 128 (304)
T 2ynn_A 78 RIRVFNYNT-GEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLT--VKLWNWEN 128 (304)
T ss_dssp EEEEEETTT-CCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSC--EEEEEGGG
T ss_pred EEEEEECCC-CcEEEEEeCCCC-cEEEEEEcCCCCEEEEECCCCe--EEEEECCC
Confidence 778888876 433324444434 47788898864 5556666654 66788763
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=96.84 E-value=0.14 Score=49.21 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=86.1
Q ss_pred CceEEEEECCCCCCCCeEEEEec--C---CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-------
Q 010654 7 PDKAWLHKLEADQSNDICLYHEK--D---DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP------- 74 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~--~---~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~------- 74 (505)
...|.+|++.+. +....+... . ......+.|+|||++|+..........|.++|+.+++....+..
T Consensus 206 dg~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 206 NGTVQISELSTL--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 283 (397)
T ss_dssp TSEEEEEETTTT--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred CCcEEEEECCCC--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccc
Confidence 356899999764 233334320 1 33345788999999987665432336799999988762333332
Q ss_pred ------ccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc------CC--------------CCcee
Q 010654 75 ------RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP------HR--------------ESVKL 127 (505)
Q Consensus 75 ------~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~--------------~~~~i 127 (505)
...... ..|+|+|+.|+..+.+ ..|.++|+.. +.....+. .. ....+
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v 357 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 357 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCC-CceeEEEecccCcccchhhhhccccccccccCCce
Confidence 222222 3499999987766543 3788889876 33222333 11 03457
Q ss_pred eEEEEeCC-----------EEEEEEecCCeeEEEEEEcC
Q 010654 128 QDIQLFID-----------HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 128 ~~~~~~~d-----------~l~~~~~~~~~~~l~~~~~~ 155 (505)
..+.|.++ .++++...++. +.+|++.
T Consensus 358 ~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~--i~iw~~~ 394 (397)
T 1sq9_A 358 FDVKFLKKGWRSGMGADLNESLCCVCLDRS--IRWFREA 394 (397)
T ss_dssp EEEEEECTTTSBSTTCTTSCEEEEEETTTE--EEEEEEE
T ss_pred eEEEeccccccccccccccceEEEecCCCc--EEEEEcC
Confidence 89999998 47777777764 5677765
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.062 Score=50.50 Aligned_cols=159 Identities=9% Similarity=0.092 Sum_probs=84.8
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-cccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
+..+++|+|||+ |++... ....|+++|.++++ .+.+.. ..... ...+++||+ +|+....+......|++++.+
T Consensus 46 ~~~~~~~~~~g~-l~~~~~--~~~~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV--FEGNIFKINPETKE-IKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CEEEEEECTTSC-EEEEET--TTCEEEEECTTTCC-EEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTT
T ss_pred cccCcEECCCCC-EEEEEC--CCCEEEEEeCCCCc-EEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCC
Confidence 445789999998 444322 23579999999886 665542 22122 234888986 555543321122589999987
Q ss_pred CCCCceEEEc-CCCCceeeEEEEeCCE-EEEEEecC----CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCC
Q 010654 111 NTSETTVLIP-HRESVKLQDIQLFIDH-LAVYEREG----GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 184 (505)
Q Consensus 111 ~~~~~~~~~~-~~~~~~i~~~~~~~d~-l~~~~~~~----~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 184 (505)
+ +....++. ......+.++.+++++ +++..... ....++.++.+ +.....+. . .+.. ..++.+
T Consensus 121 ~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~--~~~~~~~~--~--~~~~----~~~i~~ 189 (333)
T 2dg1_A 121 G-DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD--FRTVTPII--Q--NISV----ANGIAL 189 (333)
T ss_dssp S-CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT--SCCEEEEE--E--EESS----EEEEEE
T ss_pred C-CEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC--CCEEEEee--c--CCCc----ccceEE
Confidence 6 33332333 1223346778888764 44443321 13456666543 33222111 0 0000 112345
Q ss_pred cccCCEEEEEEecCCCCceEEEEECC
Q 010654 185 VFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 185 ~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
+++++.+++..+. -..+++++..
T Consensus 190 ~~dg~~l~v~~~~---~~~i~~~d~~ 212 (333)
T 2dg1_A 190 STDEKVLWVTETT---ANRLHRIALE 212 (333)
T ss_dssp CTTSSEEEEEEGG---GTEEEEEEEC
T ss_pred CCCCCEEEEEeCC---CCeEEEEEec
Confidence 6777766665432 2367888774
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.095 Score=51.77 Aligned_cols=136 Identities=12% Similarity=0.050 Sum_probs=78.2
Q ss_pred ceEEEEECC--CCCCCCeEEEEe-cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCcee----eeecccccee
Q 010654 8 DKAWLHKLE--ADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR----VLTPRVVGVD 80 (505)
Q Consensus 8 ~~l~~~~lg--t~~~~~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~----~l~~~~~~~~ 80 (505)
..|.+|++. ++ +....+.. ..+.....+.|+|||++|+.... ...++++++.++.... .+........
T Consensus 125 g~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~ 199 (450)
T 2vdu_B 125 KSLLVFDVDKTSK--NVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDVYSIDINSIPEEKFTQEPILGHVSMLT 199 (450)
T ss_dssp TEEEEEEECSSSS--SCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEETTSCCCSSCCCCCSEECSSCEE
T ss_pred CeEEEEECcCCCC--ceeeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcEEEEecCCcccccccceeeecccCceE
Confidence 457888887 43 34444432 22334557899999999876643 4568999988775111 2332322222
Q ss_pred -EEeeee---CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 81 -TAASHR---GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 81 -~~~s~d---g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..|+|| |+.|+..+. + ..+.++|+.. +.....+.......+..+.|+++.++++...++ .+.+|++..
T Consensus 200 ~~~~sp~~~~~~~l~s~~~-d----~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~--~v~vwd~~~ 271 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDR-D----EHIKISHYPQ-CFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDD--KIFAWDWKT 271 (450)
T ss_dssp EEEEEECTTSCEEEEEEET-T----SCEEEEEESC-TTCEEEECCCCSSCEEEEEECSTTEEEEEESSS--EEEEEETTT
T ss_pred EEEEcCCCCCCcEEEEEcC-C----CcEEEEECCC-CceeeeeecCCCCceEEEEECCCCEEEEEeCCC--eEEEEECCC
Confidence 349999 666554443 2 3677778765 322212222223357788887223445555554 578898864
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.02 Score=55.70 Aligned_cols=190 Identities=11% Similarity=0.076 Sum_probs=99.8
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCC---CC-ceeeeecccccee-
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK---PE-ELRVLTPRVVGVD- 80 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~---~~-~~~~l~~~~~~~~- 80 (505)
....|.+|++.++... ..+.......-...+.|+|||++|+..... ..|.++|+.+ +. ....+........
T Consensus 43 ~d~~v~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 43 TDSSLELWSLLAADSE-KPIASLQVDSKFNDLDWSHNNKIIAGALDN---GSLELYSTNEANNAINSMARFSNHSSSVKT 118 (416)
T ss_dssp CCCCCEEEESSSGGGC-SCSCCCCCSSCEEEEEECSSSSCEEEEESS---SCEEEECCSSTTSCCCEEEECCCSSSCCCE
T ss_pred CCCeEEEEEccCCCCC-cEEEEEecCCceEEEEECCCCCeEEEEccC---CeEEEeecccccccccchhhccCCccceEE
Confidence 3456889998765311 111111122334578899999988765432 3577778776 21 2333433332322
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC-----ceEEE--cCCCCceeeEEEEeCC--EEEEEEecCCeeEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSE-----TTVLI--PHRESVKLQDIQLFID--HLAVYEREGGLQKITT 151 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~--~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~ 151 (505)
..|+|+++.+++....+ ..|.++|+..... ....+ .......+..+.|+++ .++++...++ .+.+
T Consensus 119 ~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~v~i 192 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNN----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN--FASI 192 (416)
T ss_dssp EEECSSSTTBEEEECSS----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS--CEEE
T ss_pred EEEcCCCCCEEEEEcCC----CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC--CEEE
Confidence 34999944444444332 3688888875220 11111 0112335678889886 4566656655 4778
Q ss_pred EEcCCCCCcccccCCCceeeccCC----eeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 152 YRLPAVGEPLKSLQGGKSVEFIDP----VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
|++.. +..... +..... ...+..+.+++++..++++.+.......+.++++.++
T Consensus 193 wd~~~-~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 193 WDLKA-KKEVIH------LSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EETTT-TEEEEE------ECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EECCC-CCcceE------EeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 88764 221111 111100 1112234566777666666665544446677777654
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.054 Score=50.03 Aligned_cols=177 Identities=13% Similarity=0.050 Sum_probs=93.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCC-c--eEEEEEEeCCCcEEEEEec--c------------ccceEEEEEeCCCCCcee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDD-I--YSLGLQASESKKFLFIASE--S------------KITRFVFYLDVSKPEELR 70 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~-~--~~~~~~~SpDg~~i~~~~~--~------------~~~~~l~~~d~~~~~~~~ 70 (505)
..|++++..++. .+.+...... . ...++.++|||+.++-... . .....||.++.+ +. .+
T Consensus 90 ~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~ 165 (296)
T 3e5z_A 90 RRLERQREPGGE--WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LS 165 (296)
T ss_dssp TEEEEECSTTCC--EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EE
T ss_pred CeEEEEcCCCCc--EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EE
Confidence 467888875542 2333322111 1 1124678999985432111 0 013589999987 54 55
Q ss_pred eeeccccc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc---eEEEcCCCCceeeEEEEeCCEEEEEEecCCe
Q 010654 71 VLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET---TVLIPHRESVKLQDIQLFIDHLAVYEREGGL 146 (505)
Q Consensus 71 ~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~ 146 (505)
.+...... ....|+|||+.+ +.... ..+|+++++...+.. ..++ ......+.++.++.++-+++.. +
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~l-v~~~~----~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~-- 236 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLL-VSDTG----DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G-- 236 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEE-EEETT----TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T--
T ss_pred EeecCCCCCccEEECCCCCEE-EEeCC----CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C--
Confidence 55433222 223499999988 55543 248888887632332 2244 3233345577888764344444 3
Q ss_pred eEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCC-cccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 147 QKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES-VFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 147 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+.+|+.+ |.... .+..+.. +....+ +++++.++++.. ..++++++.+++
T Consensus 237 ~~v~~~~~~--g~~~~------~~~~~~~---~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~ 288 (296)
T 3e5z_A 237 DGVHVLTPD--GDELG------RVLTPQT---TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVRG 288 (296)
T ss_dssp TEEEEECTT--SCEEE------EEECSSC---CCEEEEESTTSCEEEEEET-----TEEEEEECSCCB
T ss_pred CeEEEECCC--CCEEE------EEECCCC---ceeEEEECCCCCEEEEEcC-----CeEEEEEccccc
Confidence 346777754 44222 1222221 111222 356676766544 378888887665
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.028 Score=53.44 Aligned_cols=137 Identities=14% Similarity=0.088 Sum_probs=71.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~~s 84 (505)
..|.+|++.++......++..........++|||||++|+...... .+.+.|+.++. ....+......+. ..|+
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~---~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA---TTCIWKKNQDDFECVTTLEGHENEVKSVAWA 114 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS---CEEEEEECCC-EEEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC---cEEEEEccCCCeEEEEEccCCCCCceEEEEe
Confidence 3467777754311111122122233445789999999876544322 24444554443 1223333332222 3499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+|+.|+--+.+ ..+.+.++........ .+.... ..+..+.|+++. ++++...++. +.+|++.
T Consensus 115 p~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d~~--i~~w~~~ 180 (345)
T 3fm0_A 115 PSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHT-QDVKHVVWHPSQELLASASYDDT--VKLYREE 180 (345)
T ss_dssp TTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCC-SCEEEEEECSSSSCEEEEETTSC--EEEEEEE
T ss_pred CCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcC-CCeEEEEECCCCCEEEEEeCCCc--EEEEEec
Confidence 999987766543 2566667654222111 233332 347788998864 5555556654 5567654
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.22 Score=48.59 Aligned_cols=135 Identities=12% Similarity=0.122 Sum_probs=77.9
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
..|++||+.|+ +...++... +......++|||||++|+.... ...|.+.|+.+++.++.+.... .....++.+
T Consensus 125 ~tV~lWd~~tg--~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~~~~~~~h~-~~v~~~s~~ 198 (420)
T 4gga_A 125 NSVYLWSASSG--DILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRLRNMTSHS-ARVGSLSWN 198 (420)
T ss_dssp TEEEEEETTTC--CEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCS-SCEEEEEEE
T ss_pred CEEEEEECCCC--CEEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcEEEEEeCCC-CceEEEeeC
Confidence 46999999886 344555532 3445668899999999876543 3458888998876333333222 333457778
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
+..|+--+.. ..+...+..........+..... .+..+.+.++. .++....++. +.+++...
T Consensus 199 ~~~l~sgs~d-----~~i~~~d~~~~~~~~~~~~~h~~-~~~~~~~~~~g~~l~s~~~D~~--v~i~~~~~ 261 (420)
T 4gga_A 199 SYILSSGSRS-----GHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNL--VNVWPSAP 261 (420)
T ss_dssp TTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSC--EEEEESSC
T ss_pred CCEEEEEeCC-----CceeEeeecccceeeEEeccccc-ceeeeeecCCCCeeeeeecccc--ceEEeecc
Confidence 8765544432 36667776542211113333333 35567777653 4444444543 56677653
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.17 Score=47.49 Aligned_cols=167 Identities=10% Similarity=0.019 Sum_probs=87.2
Q ss_pred eEEEEECCCCCCCCeEEEEecC--C-ceEEEEEEeCCCcEEEEEecc----ccceEEEEEeCCCCCceeeeeccccc-ee
Q 010654 9 KAWLHKLEADQSNDICLYHEKD--D-IYSLGLQASESKKFLFIASES----KITRFVFYLDVSKPEELRVLTPRVVG-VD 80 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~--~-~~~~~~~~SpDg~~i~~~~~~----~~~~~l~~~d~~~~~~~~~l~~~~~~-~~ 80 (505)
.|+++++.++. .+.+..... + ...-++.++|||+.. +.... .....||+++ +++ .+.+...... ..
T Consensus 110 gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~~~~~~~l~~~~--~g~-~~~~~~~~~~~~~ 183 (326)
T 2ghs_A 110 GLFLRDTATGV--LTLHAELESDLPGNRSNDGRMHPSGALW-IGTMGRKAETGAGSIYHVA--KGK-VTKLFADISIPNS 183 (326)
T ss_dssp EEEEEETTTCC--EEEEECSSTTCTTEEEEEEEECTTSCEE-EEEEETTCCTTCEEEEEEE--TTE-EEEEEEEESSEEE
T ss_pred CEEEEECCCCc--EEEEeeCCCCCCCCCCCCEEECCCCCEE-EEeCCCcCCCCceEEEEEe--CCc-EEEeeCCCcccCC
Confidence 47888876542 233332111 1 233467899999854 43321 1246899999 454 5555432211 12
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCC--CCC-C---ceEEEc-CCCCceeeEEEEeCCE-EEEEEecCCeeEEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVD--NTS-E---TTVLIP-HRESVKLQDIQLFIDH-LAVYEREGGLQKITTY 152 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~--~~~-~---~~~~~~-~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~ 152 (505)
..|+|||+.+|+.... ...|++++++ + + . .+.+.. ......+.++.++.++ +++....+ ..+.+|
T Consensus 184 i~~s~dg~~lyv~~~~----~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~--~~v~~~ 256 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTK----VNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE--GAVDRY 256 (326)
T ss_dssp EEECTTSCEEEEEETT----TCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT--TEEEEE
T ss_pred eEEcCCCCEEEEEECC----CCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC--CEEEEE
Confidence 3499999999987643 2489999875 3 3 2 121221 1122345678887764 44443333 246677
Q ss_pred EcCCCCCcccccCCCceeeccCCeeeecCCCCc-ccCCEEEEEEecC
Q 010654 153 RLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV-FSSRILRFHYSSL 198 (505)
Q Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (505)
+.+ +.... .+.++.. .+..+.++ ++++.++++....
T Consensus 257 d~~--g~~~~------~i~~~~~--~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 257 DTD--GNHIA------RYEVPGK--QTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CTT--CCEEE------EEECSCS--BEEEEEEESTTSCEEEEEEBCT
T ss_pred CCC--CCEEE------EEECCCC--CcEEEEEecCCCCEEEEEecCC
Confidence 653 43221 2232221 11122334 5667777666554
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.19 Score=48.61 Aligned_cols=181 Identities=10% Similarity=-0.007 Sum_probs=97.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.++ +...++. ........+.|+|||++|+.... ...|.+.|+.+++....+........ ..|+||
T Consensus 119 g~i~iwd~~~~--~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 119 GDIKVLDSNFN--LQREIDQ-AHVSEITKLKFFPSGEALISSSQ---DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp SCEEEECTTSC--EEEEETT-SSSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCCCEEEECCSSCEEEEEEETT
T ss_pred CCEEEEeCCCc--ceeeecc-cccCccEEEEECCCCCEEEEEeC---CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC
Confidence 45888888653 2222222 22334557899999998765443 34688899988763444543333332 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC--CCceeeE---------------------EEEeCC-EEEEEEe
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR--ESVKLQD---------------------IQLFID-HLAVYER 142 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~i~~---------------------~~~~~d-~l~~~~~ 142 (505)
|+.|+..+.+ ..+.+.|+.. +.....+... ....+.. +.|+++ ..+++..
T Consensus 193 ~~~l~s~~~d-----~~v~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (420)
T 3vl1_A 193 GRNVLSASLD-----GTIRLWECGT-GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH 266 (420)
T ss_dssp TTEEEEEETT-----SCEEEEETTT-TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE
T ss_pred CCEEEEEcCC-----CcEEEeECCC-CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc
Confidence 9988865543 2577778765 3222222211 1112222 333444 4555556
Q ss_pred cCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 143 EGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 143 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.++. +.+|++.. +.....+.. .....+..+.++++++.++++.+.. ..+.+.++.+++
T Consensus 267 ~dg~--i~i~d~~~-~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~~ 324 (420)
T 3vl1_A 267 VSGV--ITVHNVFS-KEQTIQLPS-------KFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSPE 324 (420)
T ss_dssp TTSC--EEEEETTT-CCEEEEECC-------TTSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCTT
T ss_pred CCCe--EEEEECCC-CceeEEccc-------ccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCCc
Confidence 5553 67888764 221111110 0011122345567777455555432 567888887654
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.11 Score=48.82 Aligned_cols=152 Identities=11% Similarity=0.018 Sum_probs=83.7
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
+-.++.|+||++.+++.... ...|+++|.++++ .+.+.....-....+++||+. ++.+. ..|++++.++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~--~~~i~~~d~~~~~-~~~~~~~~~v~~i~~~~dg~l-~v~~~------~gl~~~d~~~- 118 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNIL--ERELHELHLASGR-KTVHALPFMGSALAKISDSKQ-LIASD------DGLFLRDTAT- 118 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGG--GTEEEEEETTTTE-EEEEECSSCEEEEEEEETTEE-EEEET------TEEEEEETTT-
T ss_pred CCcCCeEeCCCCEEEEEECC--CCEEEEEECCCCc-EEEEECCCcceEEEEeCCCeE-EEEEC------CCEEEEECCC-
Confidence 45589999998887776433 4579999999885 554432211112348888864 44442 2599999876
Q ss_pred CCceEEEcCC---CCceeeEEEEeCCE-EEEEEecC----CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCC
Q 010654 113 SETTVLIPHR---ESVKLQDIQLFIDH-LAVYEREG----GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 184 (505)
Q Consensus 113 ~~~~~~~~~~---~~~~i~~~~~~~d~-l~~~~~~~----~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 184 (505)
+....+.... ....+.++.+++++ +++..... ....++.++ + +. .+.+. .... . ..++.+
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g~-~~~~~--~~~~--~----~~~i~~ 186 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K--GK-VTKLF--ADIS--I----PNSICF 186 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--TE-EEEEE--EEES--S----EEEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--Cc-EEEee--CCCc--c----cCCeEE
Confidence 4433233221 12346678888764 54443321 234566666 3 32 21111 0000 0 112345
Q ss_pred cccCCEEEEEEecCCCCceEEEEECC
Q 010654 185 VFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 185 ~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
+++++.+++..+. ...|++++..
T Consensus 187 s~dg~~lyv~~~~---~~~I~~~d~~ 209 (326)
T 2ghs_A 187 SPDGTTGYFVDTK---VNRLMRVPLD 209 (326)
T ss_dssp CTTSCEEEEEETT---TCEEEEEEBC
T ss_pred cCCCCEEEEEECC---CCEEEEEEcc
Confidence 6788777665432 3578888864
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.01 Score=56.90 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=79.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+||+.+++......+. ........++|+||+..+++.... ...|.++|+.+++..+.+......+. ..|+|+
T Consensus 204 g~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~g~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFACGDE--TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYH 280 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEEEES--SSCEEEEESSCGGGCEEECCCSSCEEEEEECSS
T ss_pred CceEEEECCCCceeeeeeec-cccccccchhhhhcccceEEEeec--ccceeEEECCCCcEeEEEeccceeEEEEEEcCC
Confidence 45888898775432211111 122334578899997665554332 34588889988763344443332322 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC-C-EEEEEEecCCeeEEEEEEcCCCCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-d-~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
|+.++.....+ ..|.+.|+.. ++....+.+. ..+..++|++ | .++++...++. +.+|+++.++.
T Consensus 281 ~~~~lasgs~D----~~i~iwd~~~-~~~~~~~~H~--~~V~~vafsP~d~~~l~s~s~Dg~--v~iW~~~~~~~ 346 (357)
T 4g56_B 281 SSPFLASISED----CTVAVLDADF-SEVFRDLSHR--DFVTGVAWSPLDHSKFTTVGWDHK--VLHHHLPSEGR 346 (357)
T ss_dssp SSCCEEEEETT----SCEEEECTTS-CEEEEECCCS--SCEEEEEECSSSTTEEEEEETTSC--EEEEECC----
T ss_pred CCCEEEEEeCC----CEEEEEECCC-CcEeEECCCC--CCEEEEEEeCCCCCEEEEEcCCCe--EEEEECCCCCc
Confidence 98766555433 3677888875 3322233332 3478899985 4 56666666664 67788875443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.24 Score=47.62 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=55.5
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeee-c---c--
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLT-P---R-- 75 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~-~---~-- 75 (505)
.|+++|..+.. .+ ..-+..+...+.+||||+++++.... ...+.|.++|.++.+....+. . +
T Consensus 48 ~v~v~D~~t~~----~~-~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~ 122 (373)
T 2mad_H 48 QQWVLDAGSGS----IL-GHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD 122 (373)
T ss_pred EEEEEECCCCe----EE-EEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc
Confidence 56666665532 12 11122233378899999998877531 123568899998875222221 1 0
Q ss_pred --ccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 76 --VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 76 --~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.......|||||++||+..... ...|.++| ++
T Consensus 123 ~g~~p~~~~~spDG~~l~v~n~~~---~~~v~viD-~t 156 (373)
T 2mad_H 123 VGPYSWMNANTPNNADLLFFQFAA---GPAVGLVV-QG 156 (373)
T ss_pred cCCCccceEECCCCCEEEEEecCC---CCeEEEEE-CC
Confidence 0111245999999999886431 24799999 76
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=96.71 E-value=0.13 Score=47.59 Aligned_cols=158 Identities=13% Similarity=0.038 Sum_probs=85.9
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..+--++.|+|++..|++... ....|+++|.+++. .+.+.....-....+++||+ |++.. . ..|++++.+
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~--~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~dG~-l~v~~-~-----~~l~~~d~~ 81 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDI--PAKKVCRWDSFTKQ-VQRVTMDAPVSSVALRQSGG-YVATI-G-----TKFCALNWK 81 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEET--TTTEEEEEETTTCC-EEEEECSSCEEEEEEBTTSS-EEEEE-T-----TEEEEEETT
T ss_pred CccccCCeEECCCCEEEEEEC--CCCEEEEEECCCCc-EEEEeCCCceEEEEECCCCC-EEEEE-C-----CeEEEEECC
Confidence 345568999998888777643 24679999999886 54433221111234889998 55544 2 379999987
Q ss_pred CCCCceEEEcCC---CCceeeEEEEeCC-EEEEEEecC---------CeeEEEEEEcCCCCCcccccCCCceeeccCCee
Q 010654 111 NTSETTVLIPHR---ESVKLQDIQLFID-HLAVYEREG---------GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 111 ~~~~~~~~~~~~---~~~~i~~~~~~~d-~l~~~~~~~---------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
+ +..+.+.... ....+.++.++++ .+++..... ....++.+ +.++. ...+. ..+. .
T Consensus 82 ~-g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~--d~~g~-~~~~~--~~~~--~--- 150 (297)
T 3g4e_A 82 E-QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSL--FPDHH-VKKYF--DQVD--I--- 150 (297)
T ss_dssp T-TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEE--CTTSC-EEEEE--EEES--B---
T ss_pred C-CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEE--ECCCC-EEEEe--eccc--c---
Confidence 5 4433333322 2234667888876 455543321 22345444 43232 21111 0111 1
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEEC--CCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDM--DMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~ 213 (505)
..++.++++++.+++.-+. ...|++++. .++.
T Consensus 151 -pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 151 -SNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQ 184 (297)
T ss_dssp -EEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCC
T ss_pred -ccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCc
Confidence 1124567788877655442 246777765 4554
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.11 Score=48.96 Aligned_cols=136 Identities=8% Similarity=0.042 Sum_probs=77.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCC---ceEEEEE----EeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDD---IYSLGLQ----ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~---~~~~~~~----~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 80 (505)
..|.+|++.++.. ....+..... ....... |+|||++++.... ...|.++|+.++. ............
T Consensus 139 ~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~~~~~~~~~v~ 213 (357)
T 3i2n_A 139 GTVKVWDPRQKDD-PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD---NGDIKLFDLRNMA-LRWETNIKNGVC 213 (357)
T ss_dssp SCEEEECTTSCSS-CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET---TSEEEEEETTTTE-EEEEEECSSCEE
T ss_pred CeEEEEeCCCCCC-cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc---CCeEEEEECccCc-eeeecCCCCceE
Confidence 4688999977532 3333332111 1222333 8999998876543 3468999999886 444333332222
Q ss_pred -EEeee---eCCEEEEEEcCCCCCCceEEEeeCCCCCCc-eE---EEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEE
Q 010654 81 -TAASH---RGNHFFITRRSDELFNSELLACPVDNTSET-TV---LIPHRESVKLQDIQLFIDH--LAVYEREGGLQKIT 150 (505)
Q Consensus 81 -~~~s~---dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~ 150 (505)
..|+| +++.|+..+.. ..+.++|+...... .. .+... ...+..+.|+++. ++++...++ .+.
T Consensus 214 ~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg--~i~ 285 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLE-----GKFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVRHLPQNRELFLTAGGAG--GLH 285 (357)
T ss_dssp EEEESCSSSSCCEEEEEEST-----TEEEEEEEEEEETTTEEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTS--EEE
T ss_pred EEEcCCCCCCCCEEEEECCC-----CeEEEEeCcCCCcccceeeeccCCC-cCCEEEEEECCCCCcEEEEEeCCC--cEE
Confidence 34999 88887776543 36777776541111 11 11122 3357889999975 455666666 466
Q ss_pred EEEcCC
Q 010654 151 TYRLPA 156 (505)
Q Consensus 151 ~~~~~~ 156 (505)
+|++..
T Consensus 286 iwd~~~ 291 (357)
T 3i2n_A 286 LWKYEY 291 (357)
T ss_dssp EEEEEC
T ss_pred EeecCC
Confidence 777653
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.011 Score=59.00 Aligned_cols=134 Identities=16% Similarity=0.076 Sum_probs=69.3
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc---------------hhHHHHHHCCcEEEEEcc-cCCCCC
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN---------------SSRLSLLDRGFIFAIAQI-RGGGEL 306 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~---------------~~~~~l~~~G~~v~~~d~-rG~~~~ 306 (505)
+..+..|.+...+. ......|++++++||||.+...+.. .....|.+ -..++.+|. .|.|-+
T Consensus 48 ~~~lfy~~~~~~~~-~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~-~~n~lfiDqPvGtGfS 125 (483)
T 1ac5_A 48 DLEYFFWKFTNNDS-NGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWIS-KGDLLFIDQPTGTGFS 125 (483)
T ss_dssp CCEEEEEEEECSCS-GGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGG-TSEEEEECCSTTSTTC
T ss_pred CceEEEEEEEecCC-CCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhh-cCCeEEEecCCCcccc
Confidence 45666664433211 1235689999999999875321000 00012322 267888995 666532
Q ss_pred chhHHHccc---ccCC---cchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhh----C-------C-Cce
Q 010654 307 GRQWYENGK---FLKK---KNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R-------P-DLF 367 (505)
Q Consensus 307 g~~~~~~~~---~~~~---~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~-------p-~~~ 367 (505)
-..-...+. .... .....|+..++. |+...+..-..++.|+|.||||..+..++.. . + =-+
T Consensus 126 y~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inL 205 (483)
T 1ac5_A 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred CCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccce
Confidence 111000000 0011 123344444443 3444443345789999999999977665532 0 1 236
Q ss_pred eEEEecCCchh
Q 010654 368 KAAVAAVPFVD 378 (505)
Q Consensus 368 ~a~v~~~~~~d 378 (505)
++++...|++|
T Consensus 206 kGi~IGNg~~d 216 (483)
T 1ac5_A 206 KALLIGNGWID 216 (483)
T ss_dssp EEEEEEEECCC
T ss_pred eeeEecCCccc
Confidence 77777777654
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=96.67 E-value=0.096 Score=49.73 Aligned_cols=136 Identities=7% Similarity=0.003 Sum_probs=77.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeee---eccccce-eEE
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL---TPRVVGV-DTA 82 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l---~~~~~~~-~~~ 82 (505)
...|++|++.++..+....+.. ...-...+.|+|||++|+..... ..|.++|+.+++ .... ....... ...
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~-~~~~~~~~~~~~~v~~~~ 103 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLKGRT-WKPTLVILRINRAARCVR 103 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETT---SCEEEEEEETTE-EEEEEECCCCSSCEEEEE
T ss_pred CCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCC---CeEEEEECCCCe-eeeeEEeecCCCceeEEE
Confidence 4568888886642113333332 22334578899999998765432 357777777664 2222 2222222 234
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+|+|+.|+..+.. ..+.++++.. +...+ .+.......+..+.|.++. .+++...++ .+.+|++.
T Consensus 104 ~~~~~~~l~~~~~d-----~~v~i~d~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~~~d~~ 172 (372)
T 1k8k_C 104 WAPNEKKFAVGSGS-----RVISICYFEQ-ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF--KCRIFSAY 172 (372)
T ss_dssp ECTTSSEEEEEETT-----SSEEEEEEET-TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS--CEEEEECC
T ss_pred ECCCCCEEEEEeCC-----CEEEEEEecC-CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC--CEEEEEcc
Confidence 99999988877643 2566666554 22211 2222223457889998864 455555555 46778864
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.036 Score=54.14 Aligned_cols=141 Identities=12% Similarity=0.136 Sum_probs=74.0
Q ss_pred ceEEEEECCCCCCCCeEEEE-ecCC-ceEEEEEEeCCCcEEEEEecc----------------ccceEEEEEeCCCCCce
Q 010654 8 DKAWLHKLEADQSNDICLYH-EKDD-IYSLGLQASESKKFLFIASES----------------KITRFVFYLDVSKPEEL 69 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~-~~~~-~~~~~~~~SpDg~~i~~~~~~----------------~~~~~l~~~d~~~~~~~ 69 (505)
-.|.+.|..|.+ .+.-++ +..+ .+-.++.|+||++.++.+.+. .....|.++|+++++..
T Consensus 164 g~v~vlD~~T~~--v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 164 GGILMLDHYSFE--PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp CEEEEECTTTCC--EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred CeEEEEECCCCe--EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 456666765542 222222 1122 334467789999966554322 12578999999987522
Q ss_pred eeeeccccce-----eEEeeeeCCEEEEEEc-----CCCCCCceEEEeeCCCCCCceE--EE--cCC---------C---
Q 010654 70 RVLTPRVVGV-----DTAASHRGNHFFITRR-----SDELFNSELLACPVDNTSETTV--LI--PHR---------E--- 123 (505)
Q Consensus 70 ~~l~~~~~~~-----~~~~s~dg~~l~~~~~-----~~~~~~~~l~~~~~~~~~~~~~--~~--~~~---------~--- 123 (505)
..+.-...+. .+.++|||+++|+... .+ ..|+++..++ +.... ++ +.. .
T Consensus 242 ~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls----s~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 242 HSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS----SSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp EEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC----EEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGG
T ss_pred eEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC----ceEEEEEecC-CceeEEEEEeCCCcccccccccccccc
Confidence 3333221121 1225999999888775 32 3454433322 21100 11 110 0
Q ss_pred ---CceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 124 ---SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 124 ---~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.....++..+.|..++++...+...+.+|++.
T Consensus 317 ~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 317 KAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 12356788888754444444455678999985
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.21 Score=47.02 Aligned_cols=178 Identities=6% Similarity=0.004 Sum_probs=92.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCcee-eeeccc-cc---eeEE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-VLTPRV-VG---VDTA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~-~l~~~~-~~---~~~~ 82 (505)
..|.++|..|.. ....+.. ...-..+.+++|| .+++... ....|+++|+++++ .. .+.-.. .+ ....
T Consensus 64 ~~v~viD~~t~~--~~~~i~~--~~~p~~i~~~~~g-~lyv~~~--~~~~v~~iD~~t~~-~~~~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 64 HVIFAIDINTFK--EVGRITG--FTSPRYIHFLSDE-KAYVTQI--WDYRIFIINPKTYE-ITGYIECPDMDMESGSTEQ 135 (328)
T ss_dssp TEEEEEETTTCC--EEEEEEC--CSSEEEEEEEETT-EEEEEEB--SCSEEEEEETTTTE-EEEEEECTTCCTTTCBCCC
T ss_pred CEEEEEECcccE--EEEEcCC--CCCCcEEEEeCCC-eEEEEEC--CCCeEEEEECCCCe-EEEEEEcCCccccCCCcce
Confidence 457788887652 2222221 1223356788999 5554432 24679999999886 33 222111 00 0011
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCC---------eeEEEEEE
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGG---------LQKITTYR 153 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~---------~~~l~~~~ 153 (505)
+.-+++++|+.... ....|.++|+++ +...+.+.... ....+..++++.+++..... ...+++++
T Consensus 136 i~~~~~~lyv~~~~---~~~~v~viD~~t-~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 136 MVQYGKYVYVNCWS---YQNRILKIDTET-DKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp EEEETTEEEEEECT---TCCEEEEEETTT-TEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred EEEECCEEEEEcCC---CCCEEEEEECCC-CeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 22278888877531 124899999886 33333333221 23456667754344433322 25678887
Q ss_pred cCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 154 LPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+ +. +. ..+.++... ....+.++++++.+++. ++ .++.+|..+++
T Consensus 210 ~~t-~~-v~-----~~~~~~~g~-~p~~la~~~d~~~lyv~-~~-----~v~~~d~~t~~ 255 (328)
T 3dsm_A 210 AET-FT-VE-----KQFKFKLGD-WPSEVQLNGTRDTLYWI-NN-----DIWRMPVEADR 255 (328)
T ss_dssp TTT-TE-EE-----EEEECCTTC-CCEEEEECTTSCEEEEE-SS-----SEEEEETTCSS
T ss_pred CCC-Ce-EE-----EEEecCCCC-CceeEEEecCCCEEEEE-cc-----EEEEEECCCCc
Confidence 653 22 21 122222111 01123456778876654 32 88999987766
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.11 Score=49.16 Aligned_cols=135 Identities=8% Similarity=0.057 Sum_probs=79.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.++ +....+... ......+.|+|||++++.... ...|.+.|+.++.....+........ ..|+|+
T Consensus 164 ~~i~~wd~~~~--~~~~~~~~h-~~~v~~~~~~~~~~~l~sg~~---d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 164 TTCALWDIETG--QQTTTFTGH-TGDVMSLSLAPDTRLFVSGAC---DASAKLWDVREGMCRQTFTGHESDINAICFFPN 237 (340)
T ss_dssp SCEEEEETTTT--EEEEEECCC-SSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred CcEEEEECCCC--cEEEEEcCC-CCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC
Confidence 35788998765 233334322 233457889999997664433 34578889888762333333332222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC-CceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+.|+--+.+ ..+.+.|+.. +.....+.... ...+..+.+++++ ++++...++ .+.+|++..
T Consensus 238 ~~~l~s~s~d-----~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~--~i~vwd~~~ 301 (340)
T 1got_B 238 GNAFATGSDD-----ATCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF--NCNVWDALK 301 (340)
T ss_dssp SSEEEEEETT-----SCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS--EEEEEETTT
T ss_pred CCEEEEEcCC-----CcEEEEECCC-CcEEEEEccCCcccceEEEEECCCCCEEEEECCCC--eEEEEEccc
Confidence 9987765543 3677778765 32222333222 2347788898874 555555555 477888753
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.098 Score=53.48 Aligned_cols=174 Identities=10% Similarity=0.041 Sum_probs=91.4
Q ss_pred ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc------c-cceeEEeeeeCCEEEEEEcCCCCCCceE
Q 010654 32 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR------V-VGVDTAASHRGNHFFITRRSDELFNSEL 104 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~------~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l 104 (505)
.+.-+..|+|||+++++..+. .+.|.++|+++++ +....+- . .+.. .++|+++.+|+.++.+. ..+
T Consensus 342 ~~~~d~~~~pdgr~~~va~~~--sn~V~ViD~~t~k-l~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~---~~V 414 (567)
T 1qks_A 342 RFLHDGGLDGSHRYFITAANA--RNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGD---DSV 414 (567)
T ss_dssp SSEEEEEECTTSCEEEEEEGG--GTEEEEEETTTTE-EEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSS---SEE
T ss_pred ccccCceECCCCCEEEEEeCC--CCeEEEEECCCCc-EEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCC---CeE
Confidence 344567899999998776543 4569999999986 3322221 1 1222 25788888887765421 368
Q ss_pred EEeeCCCCC--CceE----EEcCCCCceeeEEEEeCC--EEEEEEecCC----eeEEEEEEcCCC---CCcc--cccCCC
Q 010654 105 LACPVDNTS--ETTV----LIPHRESVKLQDIQLFID--HLAVYEREGG----LQKITTYRLPAV---GEPL--KSLQGG 167 (505)
Q Consensus 105 ~~~~~~~~~--~~~~----~~~~~~~~~i~~~~~~~d--~l~~~~~~~~----~~~l~~~~~~~~---~~~~--~~l~~~ 167 (505)
.+++.+..+ ...| .+....... ..+...+| .+++...-+. ...+.++++.+. |... +.+..+
T Consensus 415 svid~~~~~~~~~~~kvv~~i~~~g~g~-~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~ 493 (567)
T 1qks_A 415 ALIGTDPEGHPDNAWKILDSFPALGGGS-LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIA 493 (567)
T ss_dssp EEEECCTTTCTTTBTSEEEEEECSCSCC-CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHH
T ss_pred EEecCCCCCCccccCEEEEEEecCCCCC-EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccc
Confidence 888876411 1112 222221111 12333454 4444332221 346888987642 1110 111000
Q ss_pred ceeeccCCeeeecCCCCcccCCEEEEEEec-CCCCceEEEEECCCCc
Q 010654 168 KSVEFIDPVYSIDPSESVFSSRILRFHYSS-LRTPPSVYDYDMDMGI 213 (505)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~ 213 (505)
+--.+++....+..+.++++|+.++|+.-+ -.....|.++|.++.+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 494 EWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp HHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred cccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 000111111111224567899999988643 4467789999988776
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.15 Score=52.65 Aligned_cols=189 Identities=10% Similarity=-0.029 Sum_probs=98.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecccc-ceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
..|.+||+.+++......+.. ...-...++|||||++|+......+ ...+++.|.... ...+..+..... ..|+|
T Consensus 81 ~~v~lWd~~~~~~~~~~~~~~-~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~--~~~l~gh~~~v~~v~f~p 157 (611)
T 1nr0_A 81 GNVRIWDTTQTTHILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS--NGNLTGQARAMNSVDFKP 157 (611)
T ss_dssp SEEEEEESSSTTCCEEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB--CBCCCCCSSCEEEEEECS
T ss_pred CCEEEeECCCCcceeeEeecc-cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC--cceecCCCCCceEEEECC
Confidence 458889986543222222322 2223457899999999886654432 356788774322 334443332332 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
++...++....+ ..+.+.+... +.....+..... .+..+.+++|+ +++....++. +.+|++.. +.....+
T Consensus 158 ~~~~~l~s~s~D----~~v~lwd~~~-~~~~~~l~~H~~-~V~~v~fspdg~~las~s~D~~--i~lwd~~~-g~~~~~~ 228 (611)
T 1nr0_A 158 SRPFRIISGSDD----NTVAIFEGPP-FKFKSTFGEHTK-FVHSVRYNPDGSLFASTGGDGT--IVLYNGVD-GTKTGVF 228 (611)
T ss_dssp SSSCEEEEEETT----SCEEEEETTT-BEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSC--EEEEETTT-CCEEEEC
T ss_pred CCCeEEEEEeCC----CeEEEEECCC-CeEeeeeccccC-ceEEEEECCCCCEEEEEECCCc--EEEEECCC-CcEeeee
Confidence 998645554433 2566667654 222213443333 47888998874 5555566653 67788653 3222211
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
... .+........+..+.+++++..+ ++.+.. ..+.+.++.+++
T Consensus 229 ~~~-~~~~~~h~~~V~~v~~spdg~~l-~s~s~D---~~v~lWd~~~~~ 272 (611)
T 1nr0_A 229 EDD-SLKNVAHSGSVFGLTWSPDGTKI-ASASAD---KTIKIWNVATLK 272 (611)
T ss_dssp BCT-TSSSCSSSSCEEEEEECTTSSEE-EEEETT---SEEEEEETTTTE
T ss_pred ccc-cccccccCCCEEEEEECCCCCEE-EEEeCC---CeEEEEeCCCCc
Confidence 100 00000111112334567777754 444432 456677776665
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.066 Score=51.92 Aligned_cols=140 Identities=8% Similarity=0.015 Sum_probs=81.7
Q ss_pred ceEEEEECCCCCCCCeEEEE-ecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeee-eccccc--eeEEe
Q 010654 8 DKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL-TPRVVG--VDTAA 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~-~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l-~~~~~~--~~~~~ 83 (505)
..|.+|++.++ +....+. .........+.|+|||++|+.... ...|.++|+.+++....+ ...... ....|
T Consensus 154 g~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 154 NVILVWDVGTG--AAVLTLGPDVHPDTIYSVDWSRDGALICTSCR---DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp SCEEEEETTTT--EEEEEECTTTCCSCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred CEEEEEECCCC--CccEEEecCCCCCceEEEEECCCCCEEEEEec---CCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 46899999764 2333331 122334557899999998876543 346899999887623333 222222 23459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+|||+.|+.-... .....|.++|+.................+..+.|+++ .++++...++ .+.+|++..
T Consensus 229 ~~~~~~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg--~i~i~d~~~ 299 (402)
T 2aq5_A 229 VSEGKILTTGFSR--MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS--SIRYFEITS 299 (402)
T ss_dssp CSTTEEEEEEECT--TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS--CEEEEEECS
T ss_pred cCCCcEEEEeccC--CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC--eEEEEEecC
Confidence 9998765554321 1235899999876332222333223334677888876 3444444454 577888764
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.17 Score=48.54 Aligned_cols=135 Identities=15% Similarity=0.171 Sum_probs=79.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecC--CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEe
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKD--DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAA 83 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~--~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~ 83 (505)
...|.+|++.+. ....+.... ......++|+|||++|+.... ...|+++|+.+.. ...+........ ..|
T Consensus 140 d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 140 RGATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLLLGLDGHE-IFKEKLHKAKVTHAEF 212 (383)
T ss_dssp TTEEEEEETTSC---EEEEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEEEETTSCE-EEEEECSSSCEEEEEE
T ss_pred CCEEEEEECCCC---ceEEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEEEECCCCE-EEEeccCCCcEEEEEE
Confidence 356889998642 233333222 234557889999998775543 3578889985443 555544433332 349
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCC-ceE--EEcCCCCceeeEEEEeC-CE-EEEEEecCCeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSE-TTV--LIPHRESVKLQDIQLFI-DH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~--~~~~~~~~~i~~~~~~~-d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
+|+++.+++....+ ..+.++|+..... ... .+.+ ...+..+.|++ +. .+++...++ .+.+|++..
T Consensus 213 ~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~~~~~d~--~i~iwd~~~ 282 (383)
T 3ei3_B 213 NPRCDWLMATSSVD----ATVKLWDLRNIKDKNSYIAEMPH--EKPVNAAYFNPTDSTKLLTTDQRN--EIRVYSSYD 282 (383)
T ss_dssp CSSCTTEEEEEETT----SEEEEEEGGGCCSTTCEEEEEEC--SSCEEEEEECTTTSCEEEEEESSS--EEEEEETTB
T ss_pred CCCCCCEEEEEeCC----CEEEEEeCCCCCcccceEEEecC--CCceEEEEEcCCCCCEEEEEcCCC--cEEEEECCC
Confidence 99999555554432 3677888764211 111 3332 33578899988 63 444555554 578898864
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.1 Score=50.52 Aligned_cols=156 Identities=15% Similarity=0.049 Sum_probs=84.6
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
....++|+|||++|+..... ..|.++|.++.. ...+........ ..|+|+|+.|+..+.. ..+.++++..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d---g~i~i~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~ 180 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN---GELRLWNKTGAL-LNVLNFHRAPIVSVKWNKDGTHIISMDVE-----NVTILWNVIS 180 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT---SCEEEEETTSCE-EEEECCCCSCEEEEEECTTSSEEEEEETT-----CCEEEEETTT
T ss_pred ceEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCe-eeeccCCCccEEEEEECCCCCEEEEEecC-----CeEEEEECCC
Confidence 34578899999998765443 357777844432 445543332322 3499999988876643 3677788765
Q ss_pred CCCceEEEcCCCCc--------------eeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCee
Q 010654 112 TSETTVLIPHRESV--------------KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 112 ~~~~~~~~~~~~~~--------------~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
+.....+...... .+..+.|.++..+++...++ .+.+|++.. +.....+ . ....
T Consensus 181 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~i~~~d~~~-~~~~~~~------~--~~~~ 248 (425)
T 1r5m_A 181 -GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKG--AIFVYQITE-KTPTGKL------I--GHHG 248 (425)
T ss_dssp -TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGG--CEEEEETTC-SSCSEEE------C--CCSS
T ss_pred -CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCC--eEEEEEcCC-Cceeeee------c--cCCC
Confidence 3222122221111 15567777776666666654 477888764 2211111 1 1111
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+..+.+++++..++ +.+. -..+.++++.+++
T Consensus 249 ~i~~~~~~~~~~~l~-~~~~---d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 249 PISVLEFNDTNKLLL-SASD---DGTLRIWHGGNGN 280 (425)
T ss_dssp CEEEEEEETTTTEEE-EEET---TSCEEEECSSSBS
T ss_pred ceEEEEECCCCCEEE-EEcC---CCEEEEEECCCCc
Confidence 122234566776443 3332 2456777766544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.6 Score=43.85 Aligned_cols=112 Identities=5% Similarity=0.079 Sum_probs=67.3
Q ss_pred EEEEEEeC--CCcEEEEEeccccceEEEEEeCCCCCceeeee-cccc-ce-eEEeeeeCCEEEEEEcCCCCCCceEEEee
Q 010654 34 SLGLQASE--SKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVV-GV-DTAASHRGNHFFITRRSDELFNSELLACP 108 (505)
Q Consensus 34 ~~~~~~Sp--Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-~~~~-~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 108 (505)
.....|+| +|++++.... ...+.+.|+.+++ ...+. .... .. ...|+|||+.|+.-+.+ ..+.++|
T Consensus 128 v~~~~~~~~~~~~~l~s~s~---dg~i~~wd~~~~~-~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd 198 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADN---RGTIGFQSYEDDS-QYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-----GILDVYN 198 (343)
T ss_dssp EEEEECCC---CCEEEEEET---TCCEEEEESSSSC-EEEEECCCSSCCCCEEEECTTSCEEEEECTT-----SCEEEEE
T ss_pred EEEEEcCCCCCCCEEEEEeC---CCcEEEEECCCCc-EEEEEecCCCCceEEEEECCCCCEEEEEcCC-----CEEEEEE
Confidence 45678999 9998765443 3458888998886 43332 1211 22 23499999876654432 3788889
Q ss_pred CCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 109 VDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+.+.......+...-...+..+.|++++.+++...++ .+.+|++..
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~--~v~iwd~~~ 244 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ--TVVCFDLRK 244 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS--BEEEEETTS
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC--eEEEEEcCC
Confidence 8762222123433123468899999875444433344 688999864
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.14 Score=49.51 Aligned_cols=110 Identities=9% Similarity=0.087 Sum_probs=67.5
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
...+.|||||++|+.... ...|.+.|+.+++....+..+...+. ..|+|+|+.|+-.+.+ ..+.+.|+.+
T Consensus 126 v~~v~~s~dg~~l~s~~~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~- 196 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE---DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRT- 196 (393)
T ss_dssp EEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT-
T ss_pred EEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCC-
Confidence 447889999999875443 34588889988752333333332222 3499999987655533 3677888876
Q ss_pred CCceEEEcCCCCceeeEEEEeC-C-EEEEEEecCCeeEEEEEEcCC
Q 010654 113 SETTVLIPHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~-d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+.....+... ..+..+.+++ + .++++...++. +.+|++..
T Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d~~--v~iwd~~~ 238 (393)
T 1erj_A 197 GQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLDRA--VRVWDSET 238 (393)
T ss_dssp TEEEEEEECS--SCEEEEEECSTTCCEEEEEETTSC--EEEEETTT
T ss_pred CeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCCCc--EEEEECCC
Confidence 3332233322 2356777776 4 45555566654 67788763
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=96.41 E-value=0.39 Score=46.17 Aligned_cols=96 Identities=13% Similarity=0.029 Sum_probs=57.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeee-cc----
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLT-PR---- 75 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~-~~---- 75 (505)
..|+..|..|... ...|-.+..| .+..||||+++++...- ...+.|.++|.++.+....+. +.
T Consensus 59 ~~V~ViD~~t~~v-~~~I~vG~~P----~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~ 133 (386)
T 3sjl_D 59 TQQFVIDGEAGRV-IGMIDGGFLP----NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF 133 (386)
T ss_dssp EEEEEEETTTTEE-EEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC
T ss_pred CEEEEEECCCCeE-EEEEECCCCC----cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccc
Confidence 4577777655421 1111112223 37889999998776431 124679999999987222221 11
Q ss_pred ---ccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 76 ---VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 76 ---~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.......+||||+++|+.... +...+.++|+++
T Consensus 134 ~~g~~P~~~a~spDGk~lyVan~~---~~~~VsVID~~t 169 (386)
T 3sjl_D 134 LVGTYPWMTSLTPDGKTLLFYQFS---PAPAVGVVDLEG 169 (386)
T ss_dssp CBSCCGGGEEECTTSSEEEEEECS---SSCEEEEEETTT
T ss_pred ccCCCCceEEEcCCCCEEEEEEcC---CCCeEEEEECCC
Confidence 011124599999999887532 124789999886
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.32 Score=47.56 Aligned_cols=161 Identities=13% Similarity=0.057 Sum_probs=83.4
Q ss_pred EEEEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeee-c-c------ccceeEEeeeeCCEEEEEEcCCCCC
Q 010654 36 GLQASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLT-P-R------VVGVDTAASHRGNHFFITRRSDELF 100 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~-~-~------~~~~~~~~s~dg~~l~~~~~~~~~~ 100 (505)
++.+||||+++++.... .....|.++|..+.+....+. + . ..-....+||||+++|+.... +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---P 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS---S
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC---C
Confidence 67899999998877531 134679999999987223332 1 0 111124599999999988643 1
Q ss_pred CceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeec
Q 010654 101 NSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 180 (505)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (505)
...|.++|+++ .+..-.+.-. . . ..+...++..++....++. +.++++. .+....... ..+...... ...
T Consensus 199 ~~~VsVID~~t-~kvv~~I~v~-g-~-~~~~p~g~~~~v~~~~dG~--~~~V~~~-~~~v~~~~~--~~~~v~~~p-~~~ 268 (426)
T 3c75_H 199 APAVGVVDLEG-KTFDRMLDVP-D-C-YHIFPASPTVFYMNCRDGS--LARVDFA-DGETKVTNT--EVFHTEDEL-LIN 268 (426)
T ss_dssp SCEEEEEETTT-TEEEEEEECC-S-E-EEEEEEETTEEEEEETTSS--EEEEECC-TTCCEEEEC--CCCSCTTSC-BCS
T ss_pred CCeEEEEECCC-CeEEEEEEcC-C-c-eeeccCCCcEEEEEcCCCC--EEEEECC-CCcEEEEee--eeeccCCCc-eee
Confidence 24799999886 2211122211 1 1 1233333445555555543 4445542 222110000 001110100 001
Q ss_pred CCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 181 PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...++++++.+++... -..++.+|..++.
T Consensus 269 ~~~~~~dg~~~~~~s~----~g~V~ViD~~~~~ 297 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTY----TGKIFQADLTAEG 297 (426)
T ss_dssp CCEECTTTCEEEEEBT----TSEEEEEEECSSC
T ss_pred EeeecCCCCEEEEEeC----CCcEEEEeccCCc
Confidence 1223567787777643 2478999886654
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.047 Score=50.29 Aligned_cols=139 Identities=10% Similarity=0.025 Sum_probs=77.2
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc----------------hhHHHHHHCCcEEEEEccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----------------SSRLSLLDRGFIFAIAQIR 301 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~----------------~~~~~l~~~G~~v~~~d~r 301 (505)
+...++..+..|++.... + ....|+||++-||||.+...+.. .....|.+. ..++.+|.+
T Consensus 28 v~v~~~~~lFywf~es~~--~-p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~-an~lfiD~P 103 (300)
T 4az3_A 28 LKGSGSKHLHYWFVESQK--D-PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVLYLESP 103 (300)
T ss_dssp EECSTTEEEEEEEECCSS--C-TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGS-SEEEEECCS
T ss_pred eecCCCCeEEEEEEEcCC--C-CCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhh-hcchhhcCC
Confidence 344567778777543322 2 34579999999999865321000 000123332 467777765
Q ss_pred CCCCCchhHHHcccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhh---CC-CceeEEEecCCc
Q 010654 302 GGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RP-DLFKAAVAAVPF 376 (505)
Q Consensus 302 G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~---~p-~~~~a~v~~~~~ 376 (505)
-+.||...-.. .....-.....|+..++. |+...+......+.|+|.||||..+-.++.. ++ =-+++++...|+
T Consensus 104 vGtGfSy~~~~-~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 104 AGVGFSYSDDK-FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp TTSTTCEETTC-CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CcccccccCCC-cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 44444321100 000111133455555554 4444444445789999999999977666532 22 247899999999
Q ss_pred hhhhh
Q 010654 377 VDVLT 381 (505)
Q Consensus 377 ~d~~~ 381 (505)
+|...
T Consensus 183 ~d~~~ 187 (300)
T 4az3_A 183 SSYEQ 187 (300)
T ss_dssp SBHHH
T ss_pred cCHHH
Confidence 88643
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.63 Score=43.71 Aligned_cols=182 Identities=12% Similarity=0.037 Sum_probs=95.1
Q ss_pred ceEEEEECCCCCCCCeEEEEe-cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
..+.+|++.+..........- ..........|++|++ ++.... ...+.+.|+.++.....+........ ..|+|
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC---CCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 457788887653222222221 1233445678899987 332222 34588889988762333333332222 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
+++.|+--+.+ ..+.+.|+.. +.....+..... .+..+.|+++ ..+++...++ .+.+|++.. +..+..
T Consensus 195 ~~~~l~sg~~d-----~~v~~wd~~~-~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~d~--~v~iwd~~~-~~~~~~- 263 (340)
T 1got_B 195 DTRLFVSGACD-----ASAKLWDVRE-GMCRQTFTGHES-DINAICFFPNGNAFATGSDDA--TCRLFDLRA-DQELMT- 263 (340)
T ss_dssp TSSEEEEEETT-----SCEEEEETTT-CSEEEEECCCSS-CEEEEEECTTSSEEEEEETTS--CEEEEETTT-TEEEEE-
T ss_pred CCCEEEEEeCC-----CcEEEEECCC-CeeEEEEcCCcC-CEEEEEEcCCCCEEEEEcCCC--cEEEEECCC-CcEEEE-
Confidence 99866644432 3677788875 333223443333 4778899886 4555555555 367788763 221111
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...+.....+..+.+++++..++ +.+. -..+.+.+..+++
T Consensus 264 -----~~~~~~~~~v~~~~~s~~g~~l~-~g~~---d~~i~vwd~~~~~ 303 (340)
T 1got_B 264 -----YSHDNIICGITSVSFSKSGRLLL-AGYD---DFNCNVWDALKAD 303 (340)
T ss_dssp -----ECCTTCCSCEEEEEECTTSSEEE-EEET---TSEEEEEETTTCC
T ss_pred -----EccCCcccceEEEEECCCCCEEE-EECC---CCeEEEEEcccCc
Confidence 11111001122244667777544 3332 2457777766554
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.54 Score=41.85 Aligned_cols=160 Identities=9% Similarity=-0.017 Sum_probs=88.1
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
..|.-++.+++ ..|+.+......+.|..+|+++++ +..-.+-..... -.+.++|++||.++..+ .+++++|.
T Consensus 20 ~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgk-v~~~~~l~~~~fgeGi~~~~~~ly~ltw~~----~~v~v~D~ 92 (243)
T 3mbr_X 20 TAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGR-ILQRAEVPPPYFGAGIVAWRDRLIQLTWRN----HEGFVYDL 92 (243)
T ss_dssp TCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCC-EEEEEECCTTCCEEEEEEETTEEEEEESSS----SEEEEEET
T ss_pred ccccccEEEEC--CEEEEECCCCCCceEEEEECCCCC-EEEEEeCCCCcceeEEEEeCCEEEEEEeeC----CEEEEEEC
Confidence 45777888876 456665555567899999999997 322211111111 12677899999997542 48999998
Q ss_pred CCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCC-CcccC
Q 010654 110 DNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFSS 188 (505)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 188 (505)
+++.... .++..... -+++++++.+++. ++..+++++|..+ .... ..++.......+..++ +.+.+
T Consensus 93 ~tl~~~~-ti~~~~~G--wglt~dg~~L~vS---dgs~~l~~iDp~t-~~~~------~~I~V~~~g~~~~~lNeLe~~~ 159 (243)
T 3mbr_X 93 ATLTPRA-RFRYPGEG--WALTSDDSHLYMS---DGTAVIRKLDPDT-LQQV------GSIKVTAGGRPLDNLNELEWVN 159 (243)
T ss_dssp TTTEEEE-EEECSSCC--CEEEECSSCEEEE---CSSSEEEEECTTT-CCEE------EEEECEETTEECCCEEEEEEET
T ss_pred CcCcEEE-EEeCCCCc--eEEeeCCCEEEEE---CCCCeEEEEeCCC-CeEE------EEEEEccCCcccccceeeEEeC
Confidence 7633222 33332221 2556666665554 3566788887553 2211 1222111100111110 11235
Q ss_pred CEEEEEEecCCCCceEEEEECCCCc
Q 010654 189 RILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 189 ~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.++... .. ...|.++|+++++
T Consensus 160 G~lyanv--w~-s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 160 GELLANV--WL-TSRIARIDPASGK 181 (243)
T ss_dssp TEEEEEE--TT-TTEEEEECTTTCB
T ss_pred CEEEEEE--CC-CCeEEEEECCCCC
Confidence 5555333 22 3489999999998
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.018 Score=52.72 Aligned_cols=110 Identities=12% Similarity=0.042 Sum_probs=66.5
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEE-EcccCCCCCchhHHHcccccCCcchH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAI-AQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~-~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
.+.+++..+.. +.-+||.+||-.. ....+.+.++.+.. .+.++.+.-..-|.. ......
T Consensus 62 ~~~~~v~~~~~------~~~iVva~RGT~~---------~~d~l~d~~~~~~~~~~~~~~~~vh~Gf~~-----~~~~~~ 121 (269)
T 1tib_A 62 DVTGFLALDNT------NKLIVLSFRGSRS---------IENWIGNLNFDLKEINDICSGCRGHDGFTS-----SWRSVA 121 (269)
T ss_dssp TEEEEEEEETT------TTEEEEEECCCSC---------THHHHTCCCCCEEECTTTSTTCEEEHHHHH-----HHHHHH
T ss_pred CcEEEEEEECC------CCEEEEEEeCCCC---------HHHHHHhcCeeeeecCCCCCCCEecHHHHH-----HHHHHH
Confidence 46677776643 2457777888631 23567778888776 565542211111111 111345
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCc
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPF 376 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~ 376 (505)
+|+...++.+.++.- ..++.++|||+||.++..++..... .+.+....+|.
T Consensus 122 ~~~~~~~~~~~~~~~--~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 122 DTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred HHHHHHHHHHHHHCC--CceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 677777777765521 2489999999999999888876432 35666666663
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.012 Score=55.31 Aligned_cols=93 Identities=12% Similarity=-0.017 Sum_probs=53.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..|.++++||+.+... .|......| ++.|+.+++++.. ....++++.+.+...+..- ..
T Consensus 44 ~~~~~l~~~hg~~g~~~--~~~~~~~~l---~~~v~~~~~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~ 103 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTT--VFHSLASRL---SIPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QP 103 (316)
T ss_dssp CSSCCEEEECCTTCCSG--GGHHHHHHC---SSCEEEECCCTTS--------------CTTCHHHHHHHHHHHHTTT-CS
T ss_pred CCCCeEEEECCCCCCHH--HHHHHHHhc---CCCEEEEECCCCC--------------CcCCHHHHHHHHHHHHHHh-CC
Confidence 34577889998765432 243333333 4899999988210 1123455444443333321 11
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCC---Cc---eeEEEec
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRP---DL---FKAAVAA 373 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p---~~---~~a~v~~ 373 (505)
..++.++|||+||.++..++.+.+ +. ++..+..
T Consensus 104 ~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li 142 (316)
T 2px6_A 104 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLF 142 (316)
T ss_dssp SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEE
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEE
Confidence 257899999999999988886643 33 5555543
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.73 Score=42.47 Aligned_cols=179 Identities=7% Similarity=0.023 Sum_probs=93.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCcee-eeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-VLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~-~l~~~~~~~~-~~~s~ 85 (505)
..|.+|++.+++ ....+.. .......++|+||+++|+.... ...|.+.|+.++.... .+..+..... ..|+|
T Consensus 77 ~~i~vwd~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~---D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 77 FRIRVFNYNTGE--KVVDFEA-HPDYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp SEEEEEETTTCC--EEEEEEC-CSSCEEEEEECSSSSEEEEEET---TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred CEEEEEECCCCc--EEEEEeC-CCCcEEEEEEcCCCCEEEEECC---CCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 468899997752 3444443 3445567889999998764332 2347777877664122 2332322222 34898
Q ss_pred e-CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--C-EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 86 R-GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--D-HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 86 d-g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d-~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
+ +..|+--+ .+ ..+.+.|+.. +.....+.......+..+.+.+ + .+++....++ .+.+|++.. +..+
T Consensus 151 ~~~~~l~sgs-~D----~~v~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~--~i~iWd~~~-~~~~ 221 (304)
T 2ynn_A 151 KDPSTFASGC-LD----RTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL--TIKIWDYQT-KSCV 221 (304)
T ss_dssp TCTTEEEEEE-TT----SEEEEEETTC-SSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS--EEEEEETTT-TEEE
T ss_pred CCCCEEEEEe-CC----CeEEEEECCC-CCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC--eEEEEeCCC-Cccc
Confidence 4 55555433 32 3677888865 3332233333333455666653 3 4556666665 467888763 2211
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. .+......+....+++++. ++++.+.. ..+.+.+..+++
T Consensus 222 ~--------~~~~h~~~v~~~~~~p~~~-~l~s~s~D---g~i~iWd~~~~~ 261 (304)
T 2ynn_A 222 A--------TLEGHMSNVSFAVFHPTLP-IIISGSED---GTLKIWNSSTYK 261 (304)
T ss_dssp E--------EEECCSSCEEEEEECSSSS-EEEEEETT---SCEEEEETTTCC
T ss_pred e--------eeCCCCCCEEEEEECCCCC-EEEEEcCC---CeEEEEECCCCc
Confidence 1 1111111122234566666 34444432 346666766655
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.67 Score=42.00 Aligned_cols=180 Identities=9% Similarity=0.063 Sum_probs=95.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
.+.|...|+.|++ ......-+...|-.++.+ +|+.|++..+ ..+.++++|.++.+....+.-. .+.-..+++|
T Consensus 43 ~s~v~~iD~~tg~--v~~~i~l~~~~fgeGi~~--~g~~lyv~t~--~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~D 115 (266)
T 2iwa_A 43 RSSVRQVALQTGK--VENIHKMDDSYFGEGLTL--LNEKLYQVVW--LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATD 115 (266)
T ss_dssp TCEEEEEETTTCC--EEEEEECCTTCCEEEEEE--ETTEEEEEET--TCSEEEEEETTTTEEEEEEECC-SSSCCEEEEC
T ss_pred CCEEEEEECCCCC--EEEEEecCCCcceEEEEE--eCCEEEEEEe--cCCEEEEEECCCCcEEEEEECC-CCCeEEEEEC
Confidence 4678888887753 222222122334445444 4667665543 4567999999987633444322 1222448899
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCce-EEEcCCC--CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETT-VLIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~--~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
|+++|+ ++. ..+|+.+|.++..... +.++... -..+.++.+.++.++ +.... ...+.+++..+ +..+..
T Consensus 116 g~~l~v-s~g----s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~ly-vn~~~-~~~V~vID~~t-g~V~~~ 187 (266)
T 2iwa_A 116 GKILYG-SDG----TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVW-ANIWQ-TDCIARISAKD-GTLLGW 187 (266)
T ss_dssp SSSEEE-ECS----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEE-EEETT-SSEEEEEETTT-CCEEEE
T ss_pred CCEEEE-ECC----CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEE-EecCC-CCeEEEEECCC-CcEEEE
Confidence 999885 442 2489999988743332 1222211 112456777755544 33322 35688888764 332222
Q ss_pred cCCCceeeccC----------C-eeeecCCCCcccCCEEEEEEecCCCCceEEEEECC
Q 010654 164 LQGGKSVEFID----------P-VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 164 l~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
+.++. + .....+..++++++.++++.... +.++.+++.
T Consensus 188 ------I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---~~v~~i~l~ 236 (266)
T 2iwa_A 188 ------ILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---PKLFEIKLH 236 (266)
T ss_dssp ------EECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---SEEEEEEEE
T ss_pred ------EECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---CeEEEEEEe
Confidence 22210 0 00112234567778777666544 566666653
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.32 Score=46.03 Aligned_cols=137 Identities=7% Similarity=0.081 Sum_probs=76.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.+...+....+.. ...-...+.|+++ |++|+..... ..|.+.|+.++. ....+........ ..
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 457788875332222223322 2223446789987 8877654432 347777777764 1222222222222 34
Q ss_pred eeee--CCEEEEEEcCCCCCCceEEEeeCCCCCC-ceEEEcCCCCceeeEEEEeC--------------CEEEEEEecCC
Q 010654 83 ASHR--GNHFFITRRSDELFNSELLACPVDNTSE-TTVLIPHRESVKLQDIQLFI--------------DHLAVYEREGG 145 (505)
Q Consensus 83 ~s~d--g~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~--------------d~l~~~~~~~~ 145 (505)
|+|+ ++.|+..+.+ ..+.++++..... ....+... ...+..+.|.+ ..++++...++
T Consensus 109 ~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp ECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECC-TTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred eCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCC-CCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 9999 8877776643 3788888865322 22233333 23477888887 35666666665
Q ss_pred eeEEEEEEcCC
Q 010654 146 LQKITTYRLPA 156 (505)
Q Consensus 146 ~~~l~~~~~~~ 156 (505)
.+.+|++..
T Consensus 183 --~i~i~d~~~ 191 (379)
T 3jrp_A 183 --LVKIWKYNS 191 (379)
T ss_dssp --CEEEEEEET
T ss_pred --eEEEEEecC
Confidence 367787753
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.094 Score=51.55 Aligned_cols=180 Identities=10% Similarity=0.010 Sum_probs=96.3
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc----eeE
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG----VDT 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~----~~~ 81 (505)
-.|.+||+.+++. ..+.... .......+.|+| ||++|+- ... ...|.+.|+.++. .+.+...... ...
T Consensus 142 g~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~l~s-~s~--D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~ 215 (435)
T 4e54_B 142 GDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQFYA-SSM--EGTTRLQDFKGNI-LRVFASSDTINIWFCSL 215 (435)
T ss_dssp SCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTEEEE-ECS--SSCEEEEETTSCE-EEEEECCSSCSCCCCCE
T ss_pred CEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCEEEE-EeC--CCEEEEeeccCCc-eeEEeccCCCCccEEEE
Confidence 4688999977532 2333221 222334678998 6776543 322 2346777888764 5544433211 123
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
.|+|+|+.|+.-+.. ..|.+.|+.+ .... .+.... ..+..+.|.++ .++++...++. +.+|++.....
T Consensus 216 ~~~~~~~~l~~g~~d-----g~i~~wd~~~-~~~~-~~~~h~-~~v~~v~~~p~~~~~~~s~s~d~~--v~iwd~~~~~~ 285 (435)
T 4e54_B 216 DVSASSRMVVTGDNV-----GNVILLNMDG-KELW-NLRMHK-KKVTHVALNPCCDWFLATASVDQT--VKIWDLRQVRG 285 (435)
T ss_dssp EEETTTTEEEEECSS-----SBEEEEESSS-CBCC-CSBCCS-SCEEEEEECTTCSSEEEEEETTSB--CCEEETTTCCS
T ss_pred EECCCCCEEEEEeCC-----CcEeeeccCc-ceeE-EEeccc-ceEEeeeecCCCceEEEEecCcce--eeEEecccccc
Confidence 489999877654432 3688888865 2211 222222 24778888765 46666666654 56788764221
Q ss_pred cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 160 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...+ .........+..+.+++++..++ +.+.. ..+.+.+..+++
T Consensus 286 -~~~~-----~~~~~h~~~v~~~~~spdg~~l~-s~~~D---~~i~iwd~~~~~ 329 (435)
T 4e54_B 286 -KASF-----LYSLPHRHPVNAACFSPDGARLL-TTDQK---SEIRVYSASQWD 329 (435)
T ss_dssp -SSCC-----SBCCBCSSCEEECCBCTTSSEEE-EEESS---SCEEEEESSSSS
T ss_pred -cceE-----EEeeeccccccceeECCCCCeeE-EEcCC---CEEEEEECCCCc
Confidence 1111 01111111233456778887554 44432 456777776655
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.011 Score=57.66 Aligned_cols=132 Identities=11% Similarity=0.062 Sum_probs=74.3
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc----h-----------hHHHHHHCCcEEEEEcc-cCCCC
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----S-----------SRLSLLDRGFIFAIAQI-RGGGE 305 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~----~-----------~~~~l~~~G~~v~~~d~-rG~~~ 305 (505)
.+..+..|++ +... ...+.|++++++||||.+...+.. + ....|.+. ..++.+|. .|.|
T Consensus 26 ~~~~lfy~f~-~s~~--~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~-an~lfiDqPvGtG- 100 (421)
T 1cpy_A 26 EDKHFFFWTF-ESRN--DPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSN-ATVIFLDQPVNVG- 100 (421)
T ss_dssp TTEEEEEEEE-CCSS--CTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGG-SEEECCCCSTTST-
T ss_pred CCcEEEEEEE-EeCC--CCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccc-cCEEEecCCCccc-
Confidence 4566766544 4332 235689999999999865321000 0 00123333 46777884 4544
Q ss_pred CchhHHHcccccCCcchHHHHHHHHH-HHHHcCCCCC--CcEEEEeeChHHHHHHHHHhh---CC---CceeEEEecCCc
Q 010654 306 LGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNM---RP---DLFKAAVAAVPF 376 (505)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~--~rv~i~G~S~GG~~~~~~~~~---~p---~~~~a~v~~~~~ 376 (505)
|... .......-.....|+..+++ |+...+.... .++.|+|.||||..+..++.. +. =-+++++...|+
T Consensus 101 fSy~--~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~ 178 (421)
T 1cpy_A 101 FSYS--GSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp TCEE--SSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCC
T ss_pred ccCC--CCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcc
Confidence 3211 00001111234567777665 4444555555 689999999999987665532 11 236888888888
Q ss_pred hhhh
Q 010654 377 VDVL 380 (505)
Q Consensus 377 ~d~~ 380 (505)
+|..
T Consensus 179 ~dp~ 182 (421)
T 1cpy_A 179 TDPL 182 (421)
T ss_dssp CCHH
T ss_pred cChh
Confidence 7743
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.44 Score=45.05 Aligned_cols=136 Identities=11% Similarity=0.087 Sum_probs=77.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.++.......+.. .......+.|+|+ |++++.... ...|.++|+.++. ....+........ ..
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTTSCCCEEEEECCTTCEEEEE
T ss_pred CEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCCCceeeEEecCCCCceEEEE
Confidence 457888886642112222221 2334557889999 888776543 3468888887764 1222322222222 34
Q ss_pred eee-------------eCCEEEEEEcCCCCCCceEEEeeCCCCCCceE----EEcCCCCceeeEEEEeCC----EEEEEE
Q 010654 83 ASH-------------RGNHFFITRRSDELFNSELLACPVDNTSETTV----LIPHRESVKLQDIQLFID----HLAVYE 141 (505)
Q Consensus 83 ~s~-------------dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d----~l~~~~ 141 (505)
|+| |++.|+..+.+ ..|.++|+.. +...+ .+... ...+..+.|+++ .++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~-~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNS-DAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp ECCCC----------CTTCEEEEEETT-----SCEEEEEEET-TTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEE
T ss_pred EcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEecC-CCcceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEE
Confidence 888 57777666543 2677777754 22222 22222 335788999886 455566
Q ss_pred ecCCeeEEEEEEcCC
Q 010654 142 REGGLQKITTYRLPA 156 (505)
Q Consensus 142 ~~~~~~~l~~~~~~~ 156 (505)
..++. +.+|++..
T Consensus 228 ~~dg~--i~iwd~~~ 240 (379)
T 3jrp_A 228 SQDRT--CIIWTQDN 240 (379)
T ss_dssp ETTSC--EEEEEESS
T ss_pred eCCCE--EEEEeCCC
Confidence 66654 67788764
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=96.11 E-value=0.38 Score=49.17 Aligned_cols=136 Identities=10% Similarity=0.103 Sum_probs=80.1
Q ss_pred eEEEEECCCCCC--CCeEEEEecCCce-EEEEEEeC--CCcEEEEEeccccceEEEEEeCCCC------C--ceeeeecc
Q 010654 9 KAWLHKLEADQS--NDICLYHEKDDIY-SLGLQASE--SKKFLFIASESKITRFVFYLDVSKP------E--ELRVLTPR 75 (505)
Q Consensus 9 ~l~~~~lgt~~~--~~~~~~~~~~~~~-~~~~~~Sp--Dg~~i~~~~~~~~~~~l~~~d~~~~------~--~~~~l~~~ 75 (505)
.+.+|++.++.. +....+... ... ...++||| ||++|+.... ...|.+.|+.++ . ....+...
T Consensus 40 ~v~v~~~~~~~~~~~~~~~~~~h-~~~~v~~~~~sp~~~~~~l~s~~~---dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 115 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVVQFTGH-GSSVVTTVKFSPIKGSQYLCSGDE---SGKVIVWGWTFDKESNSVEVNVKSEFQVL 115 (615)
T ss_dssp EEEEEECCSSCCSSCSEEEECTT-TTSCEEEEEECSSTTCCEEEEEET---TSEEEEEEEEEEGGGTEEEEEEEEEEECC
T ss_pred eEEEEECCCCCCccccceEEecC-CCceEEEEEECcCCCCCEEEEecC---CCEEEEEeCCCCcccccccccccchhhcc
Confidence 688999876411 234444432 334 55788999 9998876544 235666776544 2 12222222
Q ss_pred cccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEE
Q 010654 76 VVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTY 152 (505)
Q Consensus 76 ~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~ 152 (505)
..... ..|+|||+.|+..+... .....+++++.. .....+... ...+..+.|+++. ++++...++ .+.+|
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~-~~~~~v~~~d~~---~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~--~v~vw 188 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGR-DNFGVFISWDSG---NSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDG--SVVFY 188 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCS-SCSEEEEETTTC---CEEEECCSC-SSCEEEEEECSSSSCEEEEEETTT--EEEEE
T ss_pred cccEEEEEEeCCCCEEEEeccCC-CCccEEEEEECC---CcceeeecC-CccEEEEEECCCCCcEEEEEeCCC--cEEEE
Confidence 22222 34999999998887642 223577777732 222233333 3357788888874 666666665 46778
Q ss_pred EcC
Q 010654 153 RLP 155 (505)
Q Consensus 153 ~~~ 155 (505)
++.
T Consensus 189 d~~ 191 (615)
T 1pgu_A 189 QGP 191 (615)
T ss_dssp ETT
T ss_pred eCC
Confidence 865
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.27 Score=50.02 Aligned_cols=130 Identities=12% Similarity=0.066 Sum_probs=76.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|+... +....+.. ...-...++||||+++|+..... ..+.+.|+++.. .+.+........ ..|+||
T Consensus 407 ~~v~~~~~~~---~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d---~~v~~w~~~~~~-~~~~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 407 KTVKLWNRNG---QLLQTLTG-HSSSVWGVAFSPDDQTIASASDD---KTVKLWNRNGQL-LQTLTGHSSSVRGVAFSPD 478 (577)
T ss_dssp SEEEEECTTC---CEEEEEEC-CSSCEEEEEECTTSSEEEEEETT---SEEEEEETTSCE-EEEEECCSSCEEEEEECTT
T ss_pred CEEEEEeCCC---CEEEEecC-CCCCeEEEEECCCCCEEEEEcCC---CEEEEEECCCCE-EEEEcCCCCCEEEEEEcCC
Confidence 4577787532 22222322 22234467899999998765432 357777876543 555554443332 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+.|+..+.+ ..+.+.+..+ .....+..... .+..+.+++|+ ++++...++ .+.+|+.+
T Consensus 479 ~~~las~~~d-----~~i~iw~~~~--~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg--~v~lwd~~ 538 (577)
T 2ymu_A 479 GQTIASASDD-----KTVKLWNRNG--QLLQTLTGHSS-SVRGVAFSPDGQTIASASDDK--TVKLWNRN 538 (577)
T ss_dssp SCEEEEEETT-----SEEEEEETTS--CEEEEEECCSS-CEEEEEECTTSSCEEEEETTS--EEEEECTT
T ss_pred CCEEEEEeCC-----CEEEEEcCCC--CEEEEEeCCCC-CEEEEEEcCCCCEEEEEECcC--EEEEEeCC
Confidence 9988765543 3677778653 22223443333 47788998874 445555665 46778754
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=96.10 E-value=0.64 Score=42.86 Aligned_cols=135 Identities=7% Similarity=0.029 Sum_probs=81.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.++. ....+.. .........|+|||++|+..... ..|.+.|+.+++....+........ ..|+|+
T Consensus 87 ~~i~vwd~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 87 KTLKIWDVSSGK--CLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp SEEEEEETTTCC--EEEEEEC-CSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred CEEEEEECCCCc--EEEEEcC-CCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 468899997752 3333432 23345577899999987654433 3588889988762334433332222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+.|+..+.+ ..+.++|+.. +.....+.......+..+.|+++. .+++...++ .+.+|++..
T Consensus 161 ~~~l~~~~~d-----~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~iwd~~~ 223 (312)
T 4ery_A 161 GSLIVSSSYD-----GLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWDYSK 223 (312)
T ss_dssp SSEEEEEETT-----SCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT--EEEEEETTT
T ss_pred CCEEEEEeCC-----CcEEEEECCC-CceeeEEeccCCCceEEEEECCCCCEEEEEcCCC--eEEEEECCC
Confidence 9977665543 3688888875 322213333333456778888864 444555554 477888763
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.9 Score=43.78 Aligned_cols=180 Identities=9% Similarity=0.091 Sum_probs=101.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-eeEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG-VDTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s~ 85 (505)
..|++.++.+. +.+.+.. ......+++|.+++..|+++-. ....|++++++++. .+.+.... .. ....+++
T Consensus 96 ~~I~~i~~~~~--~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~--~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~ 168 (386)
T 3v65_B 96 IDIRQVLPHRS--EYTLLLN--NLENAIALDFHHRRELVFWSDV--TLDRILRANLNGSN-VEEVVSTGLESPGGLAVDW 168 (386)
T ss_dssp SCEEEECTTSC--CCEEEEC--SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCC-EEEEECSSCSCCCCEEEET
T ss_pred ccceeeccCCC--cEEEEec--CCCccEEEEEecCCCeEEEEeC--CCCcEEEEecCCCC-cEEEEeCCCCCccEEEEEe
Confidence 34677776543 2333433 2334567899988888877643 24579999998875 44443221 11 1134667
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
.++.||+.... ..+|.++++++ .....++..... ...++.+++ +.||++-.. ...+++.++++ |...+.
T Consensus 169 ~~g~lY~~d~~----~~~I~~~~~dg-~~~~~l~~~~l~-~P~giavdp~~g~ly~td~~-~~~~I~r~~~d--G~~~~~ 239 (386)
T 3v65_B 169 VHDKLYWTDSG----TSRIEVANLDG-AHRKVLLWQSLE-KPRAIALHPMEGTIYWTDWG-NTPRIEASSMD--GSGRRI 239 (386)
T ss_dssp TTTEEEEEETT----TTEEEECBTTS-CSCEEEECSSCS-CEEEEEEETTTTEEEEEECS-SSCEEEEEETT--SCSCEE
T ss_pred CCCeEEEEcCC----CCeEEEEeCCC-CceEEeecCCCC-CCcEEEEEcCCCeEEEeccC-CCCEEEEEeCC--CCCcEE
Confidence 78888887643 24899999876 333334443333 356777774 355555433 23567777765 432221
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.. ..+.. + .++.++++++.++++-+. -..|+++++.+..
T Consensus 240 ~~~-~~~~~--P----nGlavd~~~~~lY~aD~~---~~~I~~~d~dG~~ 279 (386)
T 3v65_B 240 IAD-THLFW--P----NGLTIDYAGRRMYWVDAK---HHVIERANLDGSH 279 (386)
T ss_dssp EEC-SSCSC--E----EEEEEEGGGTEEEEEETT---TTEEEEECTTSCS
T ss_pred EEE-CCCCC--e----eeEEEeCCCCEEEEEECC---CCEEEEEeCCCCe
Confidence 110 01111 1 123456677777766432 2578888876543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.17 Score=49.34 Aligned_cols=141 Identities=6% Similarity=-0.039 Sum_probs=85.5
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
..+.+|++.+++.....+.... .........|+|++..+++.........|.+.|+.++.....+..........|+++
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~ 331 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH 331 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETT
T ss_pred ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCC
Confidence 3477888866543322222211 222344678999998887776554456688899998862222322222223349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
++.++..+.. ....|++.|+.+ +..-..+..... .|..++|++|+ .+++...++. +.+|++.
T Consensus 332 ~~~lv~~sg~---~d~~I~iwd~~~-~~~v~~l~gH~~-~V~~l~~spdg~~l~S~s~D~t--vriWdv~ 394 (420)
T 4gga_A 332 YKELISGHGF---AQNQLVIWKYPT-MAKVAELKGHTS-RVLSLTMSPDGATVASAAADET--LRLWRCF 394 (420)
T ss_dssp TTEEEEEECT---TTCCEEEEETTT-CCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTE--EEEECCS
T ss_pred CCeEEEEEec---CCCEEEEEECCC-CcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCe--EEEEECC
Confidence 9998877642 224788889876 333224443333 57889999874 5555666654 6778875
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.86 Score=44.16 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=78.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.+++ ....+... ......+.|+|||++|+..+.. ..|.+.|+.++...+.+......+. ..|+|+
T Consensus 130 g~i~vwd~~~~~--~~~~l~~h-~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~ 203 (410)
T 1vyh_C 130 ATIKVWDYETGD--FERTLKGH-TDSVQDISFDHSGKLLASCSAD---MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN 203 (410)
T ss_dssp SCEEEEETTTCC--CCEEECCC-SSCEEEEEECTTSSEEEEEETT---SCCCEEETTSSCEEECCCCCSSCEEEEEECSS
T ss_pred CeEEEEECCCCc--EEEEEecc-CCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCC
Confidence 458899997753 33344432 2345578899999987654332 3466778877652333333332332 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+.|+--+.+ ..+.+.|+.. +.....+..... .+..+.+.++. ++++...++. +.+|++..
T Consensus 204 ~~~l~s~s~D-----~~i~~wd~~~-~~~~~~~~~h~~-~v~~~~~~~~g~~l~s~s~D~~--v~vwd~~~ 265 (410)
T 1vyh_C 204 GDHIVSASRD-----KTIKMWEVQT-GYCVKTFTGHRE-WVRMVRPNQDGTLIASCSNDQT--VRVWVVAT 265 (410)
T ss_dssp SSEEEEEETT-----SEEEEEETTT-CCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred CCEEEEEeCC-----CeEEEEECCC-CcEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCe--EEEEECCC
Confidence 9987655432 3788888876 332213333333 36677787764 5555555553 66788753
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.39 Score=43.58 Aligned_cols=113 Identities=9% Similarity=-0.060 Sum_probs=69.0
Q ss_pred ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 32 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
.|..+..++||| .|+++......+.|.++|+++++..+.+. -...... .+..+|++||+.+..+ ..++++|.+
T Consensus 21 ~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~~~fgeGi~~~g~~lyv~t~~~----~~v~viD~~ 94 (266)
T 2iwa_A 21 AFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHK-MDDSYFGEGLTLLNEKLYQVVWLK----NIGFIYDRR 94 (266)
T ss_dssp CCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEETTC----SEEEEEETT
T ss_pred CCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEe-cCCCcceEEEEEeCCEEEEEEecC----CEEEEEECC
Confidence 366688999997 55554444457889999999997222222 1111111 2677899999998642 489999987
Q ss_pred CCCCceEEEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+..... .++.. ... -.++++++++++. + +..++.+++..+
T Consensus 95 t~~v~~-~i~~g~~~g--~glt~Dg~~l~vs-~--gs~~l~viD~~t 135 (266)
T 2iwa_A 95 TLSNIK-NFTHQMKDG--WGLATDGKILYGS-D--GTSILYEIDPHT 135 (266)
T ss_dssp TTEEEE-EEECCSSSC--CEEEECSSSEEEE-C--SSSEEEEECTTT
T ss_pred CCcEEE-EEECCCCCe--EEEEECCCEEEEE-C--CCCeEEEEECCC
Confidence 632222 34322 221 2466666666643 3 456788887653
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.1 Score=48.44 Aligned_cols=152 Identities=7% Similarity=0.004 Sum_probs=80.3
Q ss_pred EEEEeCCCcEEEEEec---c------------ccceEEEEEeCCCCCceeeeeccccc-eeEEeeeeCCEEEEEEcCCC-
Q 010654 36 GLQASESKKFLFIASE---S------------KITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDE- 98 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~---~------------~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~- 98 (505)
++.++|||+. .++.. . .....||++|.++++ ++.+. .... ....|+|||+.||+......
T Consensus 135 ~i~~d~dG~l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 135 DLIVARDGAI-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp CEEECTTSCE-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-CEEEE-EESSEEEEEECTTSSEEEEEECCC--
T ss_pred CEEECCCCCE-EEeCcCCCccccccccccccccCCCeEEEEcCCCCc-EEEEe-cCCCCcceEEcCCCCEEEEEecCCcC
Confidence 4678999984 44311 0 013689999998886 66655 2212 12359999999988865310
Q ss_pred CCCceEEEeeCCCCCCc-eEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCee
Q 010654 99 LFNSELLACPVDNTSET-TVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 99 ~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
....+|+++++.+.+.. ...+.......+.++.++.++-+++...+ .+.+|+.+ |.... .+..+..
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~---gv~~~~~~--g~~~~------~~~~~~~-- 278 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT---GVCVFDSD--GQLLG------HIPTPGT-- 278 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS---EEEEECTT--SCEEE------EEECSSC--
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC---cEEEECCC--CCEEE------EEECCCc--
Confidence 11258999887642211 11232222223456777776544444432 36677653 44322 2222221
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEEC
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 209 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 209 (505)
+....++++++.++++.+. .+|++++
T Consensus 279 -~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 279 -ASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp -CCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred -eeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 1112334567767665542 5666653
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.36 Score=45.79 Aligned_cols=135 Identities=8% Similarity=0.074 Sum_probs=75.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC--CCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE--SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s 84 (505)
..|.+||+.++ +....+...... .....++| +|++|+.... ...+.+.|+.+++....+......+. ..|+
T Consensus 176 ~~v~lwd~~~~--~~~~~~~~h~~~-v~~~~~~~~~~g~~l~sgs~---Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 249 (354)
T 2pbi_B 176 GTCALWDVESG--QLLQSFHGHGAD-VLCLDLAPSETGNTFVSGGC---DKKAMVWDMRSGQCVQAFETHESDVNSVRYY 249 (354)
T ss_dssp SEEEEEETTTC--CEEEEEECCSSC-EEEEEECCCSSCCEEEEEET---TSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CcEEEEeCCCC--eEEEEEcCCCCC-eEEEEEEeCCCCCEEEEEeC---CCeEEEEECCCCcEEEEecCCCCCeEEEEEe
Confidence 46889999775 234444433222 22345555 6777654433 34588889988762333333332222 3499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-CCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+|+.|+--+.+ ..+.++|+.. +.....+... ....+..+.+++++ ++++...++ .+.+|++..
T Consensus 250 p~~~~l~s~s~D-----~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~--~i~vwd~~~ 315 (354)
T 2pbi_B 250 PSGDAFASGSDD-----ATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY--TINVWDVLK 315 (354)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS--CEEEEETTT
T ss_pred CCCCEEEEEeCC-----CeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC--cEEEEECCC
Confidence 999887755543 3677778765 2221133322 12245678888764 455555554 467888753
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.26 Score=45.67 Aligned_cols=161 Identities=12% Similarity=0.092 Sum_probs=85.6
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
..+..++.|+|||+.|++.... ...|++++.+ +. .+.+....... ...+++||+ +++.... ..+|++++.
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~--~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~----~~~v~~~~~ 114 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLV--GRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQR-LVHCEHG----RRAITRSDA 114 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETT--TTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSC-EEEEETT----TTEEEEECT
T ss_pred CcCccCCeEeCCCCEEEEEECC--CCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCC-EEEEECC----CCEEEEECC
Confidence 4466789999999988876433 4568999884 54 55444322222 234888887 5555432 147888887
Q ss_pred CCCCCceEEEcCCC---CceeeEEEEeCCE-EEEEE----ec-----------CCeeEEEEEEcCCCCCcccccCCCcee
Q 010654 110 DNTSETTVLIPHRE---SVKLQDIQLFIDH-LAVYE----RE-----------GGLQKITTYRLPAVGEPLKSLQGGKSV 170 (505)
Q Consensus 110 ~~~~~~~~~~~~~~---~~~i~~~~~~~d~-l~~~~----~~-----------~~~~~l~~~~~~~~~~~~~~l~~~~~~ 170 (505)
++ ..+.+..... ...+.++.+++++ ++++- .. .+...++.++.. ++..+.+.
T Consensus 115 ~g--~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~--~g~~~~~~----- 185 (305)
T 3dr2_A 115 DG--QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD--GSPLQRMA----- 185 (305)
T ss_dssp TS--CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS--SCCCEEEE-----
T ss_pred CC--CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC--CCcEEEEe-----
Confidence 53 3332222111 1224567777764 55431 10 123456666543 23232221
Q ss_pred eccCCeeeecCCCCcccCCEEEEEEecC--CCCceEEEEECCCCc
Q 010654 171 EFIDPVYSIDPSESVFSSRILRFHYSSL--RTPPSVYDYDMDMGI 213 (505)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~ 213 (505)
.+..+ .++.+++|++.+++.-+.. .....|+++++..+.
T Consensus 186 ~~~~p----~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 186 DLDHP----NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EESSE----EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cCCCC----cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 11111 1234678888776554321 113578888876543
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.21 Score=46.70 Aligned_cols=134 Identities=10% Similarity=0.100 Sum_probs=78.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCc-EEEEEeccccceEEEEEeC-CCCCceeeeec--ccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKK-FLFIASESKITRFVFYLDV-SKPEELRVLTP--RVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~-~i~~~~~~~~~~~l~~~d~-~~~~~~~~l~~--~~~~~~-~~ 82 (505)
..|.+|++.+...............-...+.|+|||+ +|+.... ...|+++|+ .++. ...+.. ...... ..
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~~wd~~~~~~-~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---QGEILKVDLIGSPS-FQALTNNEANLGICRIC 108 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---TSCEEEECSSSSSS-EEECBSCCCCSCEEEEE
T ss_pred CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---CCeEEEEEeccCCc-eEeccccCCCCceEEEE
Confidence 4688888866431111111112233445788999999 7765543 346889999 8876 666654 443332 34
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCC--------CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNT--------SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
|+| ++.|+..+.+ ..|.++++... +.....+. ....+..+.|.++. +++...++ .+.+|++
T Consensus 109 ~~~-~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-l~~~~~d~--~i~i~d~ 177 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDTNSSR-LIVGMNNS--QVQWFRL 177 (342)
T ss_dssp EET-TTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEECSSE-EEEEESTT--EEEEEES
T ss_pred eCC-CCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEe--eCCceEEEEecCCc-EEEEeCCC--eEEEEEC
Confidence 889 8777766543 36777776430 11111222 23357789999998 44445444 4778987
Q ss_pred CC
Q 010654 155 PA 156 (505)
Q Consensus 155 ~~ 156 (505)
..
T Consensus 178 ~~ 179 (342)
T 1yfq_A 178 PL 179 (342)
T ss_dssp SC
T ss_pred Cc
Confidence 64
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=95.99 E-value=1.1 Score=42.54 Aligned_cols=95 Identities=11% Similarity=0.047 Sum_probs=55.0
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeeecc------
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLTPR------ 75 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~~~------ 75 (505)
.|+++|..+++ ....+. ......+.+||||+++++.... .....|.++|+++.+....+.-.
T Consensus 32 ~v~v~D~~t~~--~~~~i~---~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 32 RVHVYDYTNGK--FLGMVP---TAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp EEEEEETTTCC--EEEEEE---CCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred eEEEEECCCCe--EEEEec---CCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 56777765542 111111 1123377899999998876531 12456899999887622222211
Q ss_pred -ccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 76 -VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 76 -~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.......+||||++||..... ....+.++|+++
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~---~~~~v~v~d~~~ 140 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNAS---PATSIGIVDVAK 140 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEES---SSEEEEEEETTT
T ss_pred CCCcceEEECCCCCEEEEECCC---CCCeEEEEECCC
Confidence 111124599999998887642 123677777764
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.87 Score=42.61 Aligned_cols=152 Identities=10% Similarity=0.012 Sum_probs=82.0
Q ss_pred CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC
Q 010654 42 SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH 121 (505)
Q Consensus 42 Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (505)
++..+++... ..+.|.++|.++++..+.+..........+++|| ++|+.... ...|+++|+++ +...+.+..
T Consensus 52 ~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~----~~~v~~iD~~t-~~~~~~i~~ 123 (328)
T 3dsm_A 52 RDGIGWIVVN--NSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIW----DYRIFIINPKT-YEITGYIEC 123 (328)
T ss_dssp ETTEEEEEEG--GGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBS----CSEEEEEETTT-TEEEEEEEC
T ss_pred ECCEEEEEEc--CCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECC----CCeEEEEECCC-CeEEEEEEc
Confidence 4556655544 3467999999998723444322211223477887 77666533 24899999876 333323332
Q ss_pred CCC----ceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 122 RES----VKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 122 ~~~----~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
... .....+.+.++.+++... +....+.++++.+ +.... .+.... ....+.++++++ +++....
T Consensus 124 g~~~~~~~~p~~i~~~~~~lyv~~~-~~~~~v~viD~~t-~~~~~------~i~~g~---~p~~i~~~~dG~-l~v~~~~ 191 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQYGKYVYVNCW-SYQNRILKIDTET-DKVVD------ELTIGI---QPTSLVMDKYNK-MWTITDG 191 (328)
T ss_dssp TTCCTTTCBCCCEEEETTEEEEEEC-TTCCEEEEEETTT-TEEEE------EEECSS---CBCCCEECTTSE-EEEEBCC
T ss_pred CCccccCCCcceEEEECCEEEEEcC-CCCCEEEEEECCC-CeEEE------EEEcCC---CccceEEcCCCC-EEEEECC
Confidence 220 124456666777776643 1134678888764 22111 122111 112234456665 5555543
Q ss_pred C-CC------CceEEEEECCCCc
Q 010654 198 L-RT------PPSVYDYDMDMGI 213 (505)
Q Consensus 198 ~-~~------p~~~~~~~~~~~~ 213 (505)
. .. ...++++|..+++
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTE
T ss_pred CccCCccccCCceEEEEECCCCe
Confidence 2 21 2589999988776
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.63 Score=52.43 Aligned_cols=187 Identities=11% Similarity=0.074 Sum_probs=102.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.+++ ....+.. .......++|||||++|+.... ...|.+.|+.+++....+........ ..|+|+
T Consensus 637 ~~i~vw~~~~~~--~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~---d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 710 (1249)
T 3sfz_A 637 KTLQVFKAETGE--KLLDIKA-HEDEVLCCAFSSDDSYIATCSA---DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNK 710 (1249)
T ss_dssp SCEEEEETTTCC--EEEEECC-CSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred CeEEEEECCCCC--EEEEecc-CCCCEEEEEEecCCCEEEEEeC---CCeEEEEECCCCceEEEEcCCCCcEEEEEEecC
Confidence 468899997753 3333332 2334557889999999876543 34689999998863334433332332 348997
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQ 165 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 165 (505)
++..++.+... ...+.+.|+.+ +.....+..... .+..+.|+++. .+++...++ .+.+|++.. +.....+.
T Consensus 711 ~~~~~l~sg~~---d~~v~vwd~~~-~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~dg--~v~vwd~~~-~~~~~~~~ 782 (1249)
T 3sfz_A 711 SNHLLLATGSN---DFFLKLWDLNQ-KECRNTMFGHTN-SVNHCRFSPDDELLASCSADG--TLRLWDVRS-ANERKSIN 782 (1249)
T ss_dssp SSCCEEEEEET---TSCEEEEETTS-SSEEEEECCCSS-CEEEEEECSSTTEEEEEESSS--EEEEEEGGG-TEEEEEEE
T ss_pred CCceEEEEEeC---CCeEEEEECCC-cchhheecCCCC-CEEEEEEecCCCEEEEEECCC--eEEEEeCCC-Ccccceec
Confidence 66544444321 24688888876 333323443333 47788888863 555555555 467788763 22111110
Q ss_pred CCcee-e--c-c-CCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 166 GGKSV-E--F-I-DPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 166 ~~~~~-~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..... . . + .....+....+++++..+++.. ...+..++..++.
T Consensus 783 ~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-----~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 783 VKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-----KNKVLLFDIHTSG 830 (1249)
T ss_dssp CCCCC--------CCCCCBCCCCBCTTSSEEEEEE-----TTEEEEEETTTCC
T ss_pred ccccccccCCccccccceEEEEEECCCCCEEEEEc-----CCcEEEEEecCCC
Confidence 00000 0 0 0 0001233456788888766554 2467777776655
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.9 Score=40.93 Aligned_cols=182 Identities=14% Similarity=0.046 Sum_probs=100.4
Q ss_pred eEEEEECCCCCCCC---eEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cce-eEEe
Q 010654 9 KAWLHKLEADQSND---ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGV-DTAA 83 (505)
Q Consensus 9 ~l~~~~lgt~~~~~---~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~-~~~~ 83 (505)
+|++.++.+..... ..++..+ .....+++|+++++.|++... ....|++++++++. .+.+.... ... ...+
T Consensus 11 ~I~~~~~~g~~~~~~~~~~~~~~~-~~~~~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~-~~~~~~~~~~~p~~ia~ 86 (267)
T 1npe_A 11 KIERLPLERNTMKKTEAKAFLHIP-AKVIIGLAFDCVDKVVYWTDI--SEPSIGRASLHGGE-PTTIIRQDLGSPEGIAL 86 (267)
T ss_dssp EEEEEEESSSCBCGGGCEEEEEEE-EEEEEEEEEETTTTEEEEEET--TTTEEEEEESSSCC-CEEEECTTCCCEEEEEE
T ss_pred eEEEEEecCcccccccceeeecCC-CCcEEEEEEecCCCEEEEEEC--CCCEEEEEecCCCC-cEEEEECCCCCccEEEE
Confidence 68888885432211 2233321 123347889999888887643 24679999998765 44443221 111 2337
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
+++++.||+.... ..+|+++++++ ...+.++..... ...++.+++ +.+|++-......++..++++ +...
T Consensus 87 d~~~~~lyv~d~~----~~~I~~~~~~g-~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~~~ 158 (267)
T 1npe_A 87 DHLGRTIFWTDSQ----LDRIEVAKMDG-TQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--GTNR 158 (267)
T ss_dssp ETTTTEEEEEETT----TTEEEEEETTS-CSCEEEECSSCS-SEEEEEEETTTTEEEEEECCSSSCEEEEEETT--SCCC
T ss_pred EecCCeEEEEECC----CCEEEEEEcCC-CCEEEEEECCCC-CccEEEEeeCCCEEEEEECCCCCcEEEEEecC--CCCc
Confidence 8888888887643 24899999876 333324433322 356788876 355555433223567777765 3322
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
+.+.. ..+. .+ .++.++++++.+++.-.. ...|+++++.+.
T Consensus 159 ~~~~~-~~~~--~P----~gia~d~~~~~lyv~d~~---~~~I~~~~~~g~ 199 (267)
T 1npe_A 159 RILAQ-DNLG--LP----NGLTFDAFSSQLCWVDAG---THRAECLNPAQP 199 (267)
T ss_dssp EEEEC-TTCS--CE----EEEEEETTTTEEEEEETT---TTEEEEEETTEE
T ss_pred EEEEE-CCCC--CC----cEEEEcCCCCEEEEEECC---CCEEEEEecCCC
Confidence 11110 0011 11 123456667777665543 257888887643
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.86 Score=41.05 Aligned_cols=156 Identities=9% Similarity=0.033 Sum_probs=84.8
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE--eeeeCCEEEEEEcCCCCCCceEEEee
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNHFFITRRSDELFNSELLACP 108 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg~~l~~~~~~~~~~~~~l~~~~ 108 (505)
..|.-++.++ |+.|+++.... ..|.++|+++++..+.+.+. ..+. +.++|++||.++..+ ..++++|
T Consensus 54 ~~ftqGL~~~--~~~Ly~stG~~--g~v~~iD~~Tgkv~~~~l~~---~~FgeGit~~g~~Ly~ltw~~----~~v~V~D 122 (268)
T 3nok_A 54 NAFTQGLVFH--QGHFFESTGHQ--GTLRQLSLESAQPVWMERLG---NIFAEGLASDGERLYQLTWTE----GLLFTWS 122 (268)
T ss_dssp TCCEEEEEEE--TTEEEEEETTT--TEEEECCSSCSSCSEEEECT---TCCEEEEEECSSCEEEEESSS----CEEEEEE
T ss_pred ccccceEEEE--CCEEEEEcCCC--CEEEEEECCCCcEEeEECCC---CcceeEEEEeCCEEEEEEccC----CEEEEEE
Confidence 3466677776 45665554432 23999999999833333221 1122 778999999987542 4899999
Q ss_pred CCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCC-Cccc
Q 010654 109 VDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFS 187 (505)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~ 187 (505)
.+++.... .++..... -+++++++.++.. ++..++.++|..+ .+... .+........+..++ +.+.
T Consensus 123 ~~Tl~~~~-ti~~~~eG--wGLt~Dg~~L~vS---dGs~~l~~iDp~T-~~v~~------~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 123 GMPPQRER-TTRYSGEG--WGLCYWNGKLVRS---DGGTMLTFHEPDG-FALVG------AVQVKLRGQPVELINELECA 189 (268)
T ss_dssp TTTTEEEE-EEECSSCC--CCEEEETTEEEEE---CSSSEEEEECTTT-CCEEE------EEECEETTEECCCEEEEEEE
T ss_pred CCcCcEEE-EEeCCCce--eEEecCCCEEEEE---CCCCEEEEEcCCC-CeEEE------EEEeCCCCcccccccccEEe
Confidence 88633222 33332221 2566677766655 2566788887543 22121 222211111111000 1122
Q ss_pred CCEEEEEEecCCCCceEEEEECCCCc
Q 010654 188 SRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 188 ~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++.+++... ....|.++|+++++
T Consensus 190 dG~lyanvw---~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 190 NGVIYANIW---HSSDVLEIDPATGT 212 (268)
T ss_dssp TTEEEEEET---TCSEEEEECTTTCB
T ss_pred CCEEEEEEC---CCCeEEEEeCCCCc
Confidence 445554432 23489999999998
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.11 Score=53.86 Aligned_cols=108 Identities=12% Similarity=0.071 Sum_probs=64.5
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC-
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTS- 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~- 113 (505)
.+++||||++|++... ..+++.|+.++...+.+..+...+. ..|||||++|+--+.+ ..+.+.|+....
T Consensus 23 ~~~~spdg~~l~~~~~----~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d-----~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNG----TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH-----GNVRIWDTTQTTH 93 (611)
T ss_dssp CCEECTTSSEEEEEET----TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEESSSTTC
T ss_pred EEeeCCCCCEEEeCCC----CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC-----CCEEEeECCCCcc
Confidence 4578999999887542 3688889887653455554443333 3499999987766543 367777875411
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEE-EecC--CeeEEEEEE
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVY-EREG--GLQKITTYR 153 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~-~~~~--~~~~l~~~~ 153 (505)
.....+.... ..+..+.|++|+-.++ ...+ ....+++++
T Consensus 94 ~~~~~~~~~~-~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd 135 (611)
T 1nr0_A 94 ILKTTIPVFS-GPVKDISWDSESKRIAAVGEGRERFGHVFLFD 135 (611)
T ss_dssp CEEEEEECSS-SCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred eeeEeecccC-CceEEEEECCCCCEEEEEECCCCceeEEEEee
Confidence 1111233332 3578999998743333 3222 124566665
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.16 Score=49.60 Aligned_cols=164 Identities=10% Similarity=0.075 Sum_probs=86.7
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeee-------ecccccee-EEeeeeC-CEEEEEEcCCCCCCce
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVL-------TPRVVGVD-TAASHRG-NHFFITRRSDELFNSE 103 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l-------~~~~~~~~-~~~s~dg-~~l~~~~~~~~~~~~~ 103 (505)
...++|+|||++|+.. ....|.+.|+.++. ....+ ........ ..|+|+| +.|+..+.+ ..
T Consensus 180 v~~~~~~~~~~~l~s~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~ 250 (447)
T 3dw8_B 180 INSISINSDYETYLSA----DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK-----GT 250 (447)
T ss_dssp CCEEEECTTSSEEEEE----CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT-----SC
T ss_pred eEEEEEcCCCCEEEEe----CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC-----Ce
Confidence 3467899999987653 25678888887432 12211 12221222 3499999 666555543 36
Q ss_pred EEEeeCCCCCCc----eEEEcCCCC-----------ceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCc
Q 010654 104 LLACPVDNTSET----TVLIPHRES-----------VKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGK 168 (505)
Q Consensus 104 l~~~~~~~~~~~----~~~~~~~~~-----------~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 168 (505)
|.++|+.. +.. ...+....+ ..+..+.|++++.+++.... ..+.+|++...+..+..+....
T Consensus 251 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 251 IRLCDMRA-SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp EEEEETTT-CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCG
T ss_pred EEEEECcC-CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccc
Confidence 78888765 222 224544433 15788999987544444333 5688899864333222221100
Q ss_pred eeec-------cCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 169 SVEF-------IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 169 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.- ....+.+..+.+++++..+ ++.+. -..+.+.++.+++
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~---dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSY---NNFFRMFDRNTKR 375 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECS---TTEEEEEETTTCC
T ss_pred cccccccccccccccccceEEEECCCCCEE-EEecc---CCEEEEEEcCCCc
Confidence 0000 0000000113466777755 44443 3578888888776
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=95.84 E-value=0.26 Score=48.29 Aligned_cols=140 Identities=11% Similarity=0.148 Sum_probs=81.2
Q ss_pred CceEEEEECCCCCC-CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecccccee-EEe
Q 010654 7 PDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAA 83 (505)
Q Consensus 7 ~~~l~~~~lgt~~~-~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~ 83 (505)
...|.+|++.+... .....+.. ...-...+.|+|+|++++++... ...|.++|+.+.. ....+........ ..|
T Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 253 DQKLMIWDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp TSEEEEEETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred CCeEEEEECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 35689999987531 22333332 22234467899999976655433 3458888888743 2344443332222 349
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCC-----------ceEEEcCC-CCceeeEEEEeCCE--EEEEEecCCeeEE
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSE-----------TTVLIPHR-ESVKLQDIQLFIDH--LAVYEREGGLQKI 149 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~~-~~~~i~~~~~~~d~--l~~~~~~~~~~~l 149 (505)
+|+|+.+++....+ ..|.++++...+. ...+.... ....+..+.|+++. +++....++ .+
T Consensus 330 sp~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg--~i 403 (430)
T 2xyi_A 330 SPHNETILASSGTD----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN--IM 403 (430)
T ss_dssp CSSCTTEEEEEETT----SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTS--EE
T ss_pred CCCCCCEEEEEeCC----CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCC--CE
Confidence 99998877776543 2566667653121 12222222 23358899999873 566666665 46
Q ss_pred EEEEcC
Q 010654 150 TTYRLP 155 (505)
Q Consensus 150 ~~~~~~ 155 (505)
.+|++.
T Consensus 404 ~iw~~~ 409 (430)
T 2xyi_A 404 QVWQMA 409 (430)
T ss_dssp EEEEEC
T ss_pred EEeEcc
Confidence 677765
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=95.84 E-value=0.12 Score=50.64 Aligned_cols=139 Identities=8% Similarity=0.074 Sum_probs=81.3
Q ss_pred ceEEEEECCCCCCCC-----eEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeeccccce
Q 010654 8 DKAWLHKLEADQSND-----ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGV 79 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~-----~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~ 79 (505)
..|.+|++.++.... ...+.. .......++|+|++..++++... ...|.+.|+.++. ....+.......
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD--DQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred CeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC--CCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 468899997643211 122322 22234578899965555544332 3568888888762 123333333233
Q ss_pred e-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCC
Q 010654 80 D-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 80 ~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~ 156 (505)
. ..|+|+++.+++....+ ..|.++|+...+.....+... ...+..+.|+++. ++++...++ .+.+|++..
T Consensus 281 ~~i~~~p~~~~~l~tg~~d----g~v~vwd~~~~~~~~~~~~~h-~~~v~~i~~sp~~~~~l~s~~~d~--~i~iwd~~~ 353 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSAD----KTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETILASSGTDR--RLHVWDLSK 353 (430)
T ss_dssp EEEEECSSCTTEEEEEETT----SEEEEEETTCTTSCSEEEECC-SSCEEEEEECSSCTTEEEEEETTS--CCEEEEGGG
T ss_pred EEEEeCCCCCCEEEEEeCC----CeEEEEeCCCCCCCeEEeecC-CCCEEEEEECCCCCCEEEEEeCCC--cEEEEeCCC
Confidence 2 34999999777776543 378888987533322234433 2357889998864 566666665 467788864
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.61 Score=48.84 Aligned_cols=181 Identities=11% Similarity=0.001 Sum_probs=98.7
Q ss_pred CceEEEEECCCCCCCC---eEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EE
Q 010654 7 PDKAWLHKLEADQSND---ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TA 82 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~---~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~ 82 (505)
...|.+|++.+..... ...+.+ +......+.|||||++|+..+. ...|.+.|+.++...+.+..+...+. ..
T Consensus 404 D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs~---Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~ 479 (694)
T 3dm0_A 404 DKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGSW---DGELRLWDLAAGVSTRRFVGHTKDVLSVA 479 (694)
T ss_dssp TSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred CCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEeC---CCcEEEEECCCCcceeEEeCCCCCEEEEE
Confidence 3568889986543211 122332 2334557889999998764433 34688889988763344444433333 34
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC---CCCceeeEEEEeCCE---EEEEEecCCeeEEEEEEcCC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH---RESVKLQDIQLFIDH---LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~d~---l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+|||+.|+-.+.+ ..+.+.+..+ .....+.. .....+..+.|+++. .++....++. +.+|++..
T Consensus 480 ~s~~~~~l~s~s~D-----~~i~iwd~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~--v~vwd~~~ 550 (694)
T 3dm0_A 480 FSLDNRQIVSASRD-----RTIKLWNTLG--ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT--VKVWNLSN 550 (694)
T ss_dssp ECTTSSCEEEEETT-----SCEEEECTTS--CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC--EEEEETTT
T ss_pred EeCCCCEEEEEeCC-----CEEEEEECCC--CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe--EEEEECCC
Confidence 99999987755543 2566667643 22222221 112246778887753 5566666653 67788763
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.... .+......+..+.++++++. +++.+.. ..+.+.++.+++
T Consensus 551 -~~~~~--------~~~~h~~~v~~v~~spdg~~-l~sg~~D---g~i~iwd~~~~~ 594 (694)
T 3dm0_A 551 -CKLRS--------TLAGHTGYVSTVAVSPDGSL-CASGGKD---GVVLLWDLAEGK 594 (694)
T ss_dssp -CCEEE--------EECCCSSCEEEEEECTTSSE-EEEEETT---SBCEEEETTTTE
T ss_pred -CcEEE--------EEcCCCCCEEEEEEeCCCCE-EEEEeCC---CeEEEEECCCCc
Confidence 22111 11111112233456677774 3444432 456667776665
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.14 Score=51.89 Aligned_cols=111 Identities=13% Similarity=0.034 Sum_probs=68.0
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-----ce-eEEeeeeCCEEEEEEcCCCCCCceE
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-----GV-DTAASHRGNHFFITRRSDELFNSEL 104 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-----~~-~~~~s~dg~~l~~~~~~~~~~~~~l 104 (505)
..+...++|||||++|+..+... .+.+.|.++ . +..+. +.. .. ...|||||+.|+.-+.+ +.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg---~V~iwd~~~-~-l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtV 153 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNG---NVSVFKDNK-M-LTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-----GEL 153 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTS---CEEEEETTE-E-EEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT-----SEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCC---cEEEEeCCc-e-eeecc-CCCccccccEEEEEEcCCCCEEEEEcCC-----CEE
Confidence 45677899999999998766543 355566433 1 33333 211 12 23599999999988764 267
Q ss_pred EEeeCCCCCCc------e-EEEc---CCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 105 LACPVDNTSET------T-VLIP---HRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 105 ~~~~~~~~~~~------~-~~~~---~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.+.++.+ +.. . ..+. ......+..++|++|+ +++...+. .+++|++..
T Consensus 154 kIWd~~~-~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~--tVrlWd~~~ 211 (588)
T 2j04_A 154 QFFSIRK-NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNN--SVFSMTVSA 211 (588)
T ss_dssp EEEECCC-CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTC--CEEEECCCS
T ss_pred EEEECCC-CccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCC--eEEEEECCC
Confidence 7777765 321 1 1231 1112368899999999 55555543 367788763
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.56 Score=42.23 Aligned_cols=133 Identities=10% Similarity=0.090 Sum_probs=74.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
+.|...|+.|+.. ..-..-++..|-.+ .+++|..|+...+ ..+.++++|.++.+....+.-..+| ..+++||
T Consensus 65 S~v~~vD~~Tgkv--~~~~~l~~~~FgeG--it~~g~~ly~ltw--~~~~v~v~D~~t~~~~~ti~~~~eG--~glt~dg 136 (262)
T 3nol_A 65 SSIRKVDIESGKT--LQQIELGKRYFGEG--ISDWKDKIVGLTW--KNGLGFVWNIRNLRQVRSFNYDGEG--WGLTHND 136 (262)
T ss_dssp EEEEEECTTTCCE--EEEEECCTTCCEEE--EEEETTEEEEEES--SSSEEEEEETTTCCEEEEEECSSCC--CCEEECS
T ss_pred ceEEEEECCCCcE--EEEEecCCccceeE--EEEeCCEEEEEEe--eCCEEEEEECccCcEEEEEECCCCc--eEEecCC
Confidence 4688888887632 22222222334334 4556777765533 4678999999988733444322222 2367899
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCce-EEEcCC--CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETT-VLIPHR--ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~--~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+.||... +. .+|+.+|.+++.... +.++.. +-..+.++.|.++.++..... ...+.++|..
T Consensus 137 ~~L~~Sd---Gs--~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~--~~~I~vIDp~ 200 (262)
T 3nol_A 137 QYLIMSD---GT--PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ--TNKIVRIDPE 200 (262)
T ss_dssp SCEEECC---SS--SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT--SSEEEEECTT
T ss_pred CEEEEEC---CC--CeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc--CCeEEEEECC
Confidence 8877653 22 489999988643322 223211 112345678887776644333 2456677654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.12 Score=52.91 Aligned_cols=109 Identities=9% Similarity=0.010 Sum_probs=64.7
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCC----Cceeeeeccccc-ee-EEeee--eCCEEEEEEcCCCCCCceEEE
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKP----EELRVLTPRVVG-VD-TAASH--RGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~----~~~~~l~~~~~~-~~-~~~s~--dg~~l~~~~~~~~~~~~~l~~ 106 (505)
..++|||||++|++.. ...+.++|++++ .....+..+... +. ..|+| ||+.|+..+.+ ..+.+
T Consensus 22 ~~~~~spdg~~l~~~~----~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d-----g~v~v 92 (615)
T 1pgu_A 22 THLSYDPTTNAIAYPC----GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES-----GKVIV 92 (615)
T ss_dssp CCCEEETTTTEEEEEE----TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT-----SEEEE
T ss_pred eEEEECCCCCEEEEec----CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC-----CEEEE
Confidence 3578999999998876 236888898887 434555544434 33 34999 99988776643 35666
Q ss_pred eeCCCC-------CCceEEEcCCCCceeeEEEEeCCE-EEEEEecC--CeeEEEEEE
Q 010654 107 CPVDNT-------SETTVLIPHRESVKLQDIQLFIDH-LAVYEREG--GLQKITTYR 153 (505)
Q Consensus 107 ~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~--~~~~l~~~~ 153 (505)
.++... ......+... ...+..+.|+++. .+++...+ ....+++++
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d 148 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGEGRDNFGVFISWD 148 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEECCSSCSEEEEETT
T ss_pred EeCCCCcccccccccccchhhcc-cccEEEEEEeCCCCEEEEeccCCCCccEEEEEE
Confidence 676431 0111123322 3357888998874 33333322 124566665
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=95.73 E-value=0.52 Score=45.07 Aligned_cols=187 Identities=10% Similarity=-0.011 Sum_probs=95.5
Q ss_pred ceEEEEECCCCCC----CCeEEEEecCCceEEEEEEeCC----C---cEEEEEeccccceEEEEEeCCCCCc-----eee
Q 010654 8 DKAWLHKLEADQS----NDICLYHEKDDIYSLGLQASES----K---KFLFIASESKITRFVFYLDVSKPEE-----LRV 71 (505)
Q Consensus 8 ~~l~~~~lgt~~~----~~~~~~~~~~~~~~~~~~~SpD----g---~~i~~~~~~~~~~~l~~~d~~~~~~-----~~~ 71 (505)
..|.+|++.+... +....+.. .......+.|+|| | ++|+..... ..|+++|+.++.. ...
T Consensus 36 g~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 36 GYLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp SEEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEEECTTTCCEEEEE
T ss_pred CEEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEccCCccccccccee
Confidence 4689999976530 12333332 2333457789999 9 887655432 3477777766642 344
Q ss_pred eecc-----cccee-EEee----eeCCE-EEEEEcCCCCCCceEEEeeCCC------CCCce-----EEEc-----CCCC
Q 010654 72 LTPR-----VVGVD-TAAS----HRGNH-FFITRRSDELFNSELLACPVDN------TSETT-----VLIP-----HRES 124 (505)
Q Consensus 72 l~~~-----~~~~~-~~~s----~dg~~-l~~~~~~~~~~~~~l~~~~~~~------~~~~~-----~~~~-----~~~~ 124 (505)
+... ..... ..|+ |+++. |+..+.. ..|+++++.. ..... .+.. ....
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 4333 12222 3499 99998 6655543 2566666543 12221 1221 2223
Q ss_pred ceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeec-cCC---eeeecCCCCcccCCEEEEEEecCCC
Q 010654 125 VKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF-IDP---VYSIDPSESVFSSRILRFHYSSLRT 200 (505)
Q Consensus 125 ~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (505)
..+..+.|.++.++++...++ .+.+|++.. +..+.. +.. ... ...+..+.+++++..++ +.+....
T Consensus 187 ~~i~~~~~~~~~~l~~~~~dg--~i~i~d~~~-~~~~~~------~~~~~~h~~~~~~i~~i~~~~~~~~l~-~~~~d~~ 256 (397)
T 1sq9_A 187 QFATSVDISERGLIATGFNNG--TVQISELST-LRPLYN------FESQHSMINNSNSIRSVKFSPQGSLLA-IAHDSNS 256 (397)
T ss_dssp CCCCEEEECTTSEEEEECTTS--EEEEEETTT-TEEEEE------EECCC---CCCCCEEEEEECSSTTEEE-EEEEETT
T ss_pred CCceEEEECCCceEEEEeCCC--cEEEEECCC-CceeEE------EeccccccccCCccceEEECCCCCEEE-EEecCCC
Confidence 357788998877444444444 477898763 221111 111 001 11122345567777554 3333333
Q ss_pred CceEEEEECCCCc
Q 010654 201 PPSVYDYDMDMGI 213 (505)
Q Consensus 201 p~~~~~~~~~~~~ 213 (505)
...+.++++.+++
T Consensus 257 ~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 257 FGCITLYETEFGE 269 (397)
T ss_dssp EEEEEEEETTTCC
T ss_pred CceEEEEECCCCc
Confidence 3578888887665
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.69 E-value=1.2 Score=40.62 Aligned_cols=178 Identities=12% Similarity=0.044 Sum_probs=94.0
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc------ee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG------VD 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~------~~ 80 (505)
..+|++|+..++ ...+..+ ......+.++|||+.++.. . ....|+++|.++++ .+.+.....+ ..
T Consensus 49 ~~~i~~~~~~~~----~~~~~~~-~~~~~~l~~~~dg~l~v~~-~--~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~ 119 (296)
T 3e5z_A 49 QNRTWAWSDDGQ----LSPEMHP-SHHQNGHCLNKQGHLIACS-H--GLRRLERQREPGGE-WESIADSFEGKKLNSPND 119 (296)
T ss_dssp GTEEEEEETTSC----EEEEESS-CSSEEEEEECTTCCEEEEE-T--TTTEEEEECSTTCC-EEEEECEETTEECCCCCC
T ss_pred CCEEEEEECCCC----eEEEECC-CCCcceeeECCCCcEEEEe-c--CCCeEEEEcCCCCc-EEEEeeccCCCCCCCCCC
Confidence 457888988653 3344322 2334567899999854332 2 23569999998886 6555432211 12
Q ss_pred EEeeeeCCEEEEEEcC-------------CCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCee
Q 010654 81 TAASHRGNHFFITRRS-------------DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQ 147 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~ 147 (505)
..++|||+ +|+.... .......|+.++.++ ... .+..... ...++.|++|+-.++ ......
T Consensus 120 i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~-~~~~~~~-~~~gi~~s~dg~~lv-~~~~~~ 193 (296)
T 3e5z_A 120 VCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG--TLS-APIRDRV-KPNGLAFLPSGNLLV-SDTGDN 193 (296)
T ss_dssp EEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS--CEE-EEECCCS-SEEEEEECTTSCEEE-EETTTT
T ss_pred EEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCCC--CEE-EeecCCC-CCccEEECCCCCEEE-EeCCCC
Confidence 34889886 5664211 011235899998763 333 2333322 356788988743333 333334
Q ss_pred EEEEEEcCCCCCcc-cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 148 KITTYRLPAVGEPL-KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 148 ~l~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
.+++|++...+. + .. .+.+. .......++.+++++. +++.. ...|++++..+
T Consensus 194 ~i~~~~~~~~g~-~~~~---~~~~~--~~~~~p~~i~~d~~G~-l~v~~-----~~~v~~~~~~g 246 (296)
T 3e5z_A 194 ATHRYCLNARGE-TEYQ---GVHFT--VEPGKTDGLRVDAGGL-IWASA-----GDGVHVLTPDG 246 (296)
T ss_dssp EEEEEEECSSSC-EEEE---EEEEC--CSSSCCCSEEEBTTSC-EEEEE-----TTEEEEECTTS
T ss_pred eEEEEEECCCCc-CcCC---CeEee--CCCCCCCeEEECCCCC-EEEEc-----CCeEEEECCCC
Confidence 678888753232 1 00 01110 0001112334556665 55444 35788998763
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=95.68 E-value=0.37 Score=44.81 Aligned_cols=112 Identities=8% Similarity=0.028 Sum_probs=64.1
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
......+++++...++..... ...|.+.|+.++.....+......+. ..|+|||+.|+--+.+ ..+.++|+..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~-d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~ 246 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGW-DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD-----GQAMLWDLNE 246 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEET-TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----CEEEEEETTT
T ss_pred cccceEEccCCCCcEEEEEcC-CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEecc
Confidence 344567888775533332222 23477888888752233333332222 3499999977755543 3788888875
Q ss_pred CCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 112 TSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
......+... ..+..+.+.++..+++...++ .+.+|++.
T Consensus 247 -~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~d~--~i~iwd~~ 285 (340)
T 4aow_A 247 -GKHLYTLDGG--DIINALCFSPNRYWLCAATGP--SIKIWDLE 285 (340)
T ss_dssp -TEEEEEEECS--SCEEEEEECSSSSEEEEEETT--EEEEEETT
T ss_pred -CceeeeecCC--ceEEeeecCCCCceeeccCCC--EEEEEECC
Confidence 3222233322 246778888876666665554 46778876
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=95.62 E-value=0.09 Score=50.63 Aligned_cols=118 Identities=7% Similarity=0.021 Sum_probs=68.9
Q ss_pred EEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC-----CCCCceEEEeeCC
Q 010654 38 QASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD-----ELFNSELLACPVD 110 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~~~l~~~~~~ 110 (505)
...|||+++++..... ..+.|+++|.++++....+.-.... ...+||||+++|+..... +.....+.++|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3479999987775532 2479999999988623333322222 356999999999886310 1112468899988
Q ss_pred CCCCc-eEEEcCCC----CceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSET-TVLIPHRE----SVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~-~~~~~~~~----~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
+.... ++.++... ......+..++|+ .+++.+......+.++|+.+
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 73322 22333211 1123456677763 33444443345688888764
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.62 E-value=1.6 Score=41.36 Aligned_cols=179 Identities=9% Similarity=0.108 Sum_probs=99.9
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc-ccc-eeEEeeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVG-VDTAASHR 86 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~-~~~~~s~d 86 (505)
.|++.++.+. ..+.+.. ......+++|.+++..|+++-. ....|++++++++. .+.+... ... ....+++.
T Consensus 54 ~I~~i~~~g~--~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~--~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~ 126 (349)
T 3v64_C 54 DIRQVLPHRS--EYTLLLN--NLENAIALDFHHRRELVFWSDV--TLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWV 126 (349)
T ss_dssp CEEEECTTSC--CEEEEEC--SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETT
T ss_pred ceEEEeCCCC--eeEEeec--CCCceEEEEEeccccEEEEEec--cCCceEEEecCCCC-ceEEEeCCCCCccEEEEecC
Confidence 4666666432 2233332 2334567889988888877643 24579999998875 4444322 111 11346667
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
++.||+.... ..+|.++++++ .....++..... ...++.+++ +.+|++-..+ ..+++.++++ |...+.+
T Consensus 127 ~g~ly~~d~~----~~~I~~~~~dG-~~~~~l~~~~l~-~P~~iavdp~~g~ly~td~~~-~~~I~r~~~d--G~~~~~~ 197 (349)
T 3v64_C 127 HDKLYWTDSG----TSRIEVANLDG-AHRKVLLWQSLE-KPRAIALHPMEGTIYWTDWGN-TPRIEASSMD--GSGRRII 197 (349)
T ss_dssp TTEEEEEETT----TTEEEEEETTS-CSCEEEECTTCS-CEEEEEEETTTTEEEEEECSS-SCEEEEEETT--SCSCEES
T ss_pred CCeEEEEcCC----CCeEEEEcCCC-CceEEEEeCCCC-CcceEEEecCcCeEEEeccCC-CCEEEEEeCC--CCCcEEE
Confidence 8888888643 24899999886 333334443333 356777875 3555554332 3567777765 4322222
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.. ..+.. + .++.++++++.++++-+. -..|+++++.+..
T Consensus 198 ~~-~~~~~--P----nGla~d~~~~~lY~aD~~---~~~I~~~~~dG~~ 236 (349)
T 3v64_C 198 AD-THLFW--P----NGLTIDYAGRRMYWVDAK---HHVIERANLDGSH 236 (349)
T ss_dssp CC-SSCSC--E----EEEEEETTTTEEEEEETT---TTEEEEEETTSCS
T ss_pred EE-CCCCC--c----ceEEEeCCCCEEEEEECC---CCEEEEEeCCCCc
Confidence 11 11111 1 123456677877766432 2578888876543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.5 Score=43.40 Aligned_cols=140 Identities=6% Similarity=-0.053 Sum_probs=84.7
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~ 85 (505)
..|.+|++.+++.....+.... .........++|++..++..........+.+.|..... ........... ...++|
T Consensus 172 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~ 250 (318)
T 4ggc_A 172 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSP 250 (318)
T ss_dssp SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEET
T ss_pred cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-ccccccceeeeeeeeecc
Confidence 4578889877644332222221 12233466799999888776655555667788887765 33322222222 234899
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
+++.++..+.. ....|++.|+.+ +.....+..... .+..++|++|+ ++++...++. +.+|++.
T Consensus 251 ~~~~~~~~sg~---~d~~i~iwd~~~-~~~~~~l~gH~~-~V~~l~~spdg~~l~S~s~D~~--v~iWd~~ 314 (318)
T 4ggc_A 251 HYKELISGHGF---AQNQLVIWKYPT-MAKVAELKGHTS-RVLSLTMSPDGATVASAAADET--LRLWRCF 314 (318)
T ss_dssp TTTEEEEEECT---TTCCEEEEETTT-CCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTE--EEEECCS
T ss_pred cccceEEEEEc---CCCEEEEEECCC-CcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCe--EEEEECC
Confidence 99998877643 124788889876 333224443333 57889999874 5555666654 6678764
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.53 E-value=1.1 Score=41.89 Aligned_cols=137 Identities=12% Similarity=0.058 Sum_probs=70.9
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-------ceeeeeccccce
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-------ELRVLTPRVVGV 79 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-------~~~~l~~~~~~~ 79 (505)
..|.+|++.++..+...++... ...-...++|+|||++|+..... ..|.+.|+.... ....+..+...+
T Consensus 34 ~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V 110 (330)
T 2hes_X 34 RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAIIEGHENEV 110 (330)
T ss_dssp SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEEEC----CE
T ss_pred CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEEEcCCCCcE
Confidence 4588888866422222233211 23344578899999987654432 235555654321 112232222222
Q ss_pred e-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC-ceE--EEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEc
Q 010654 80 D-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE-TTV--LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 80 ~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~--~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~ 154 (505)
. ..|+|+|+.|+--+.+ ..+.+.|+...+. .+. .+.... ..+..+.|+++ .++++...++. +.+|++
T Consensus 111 ~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~~--i~iW~~ 182 (330)
T 2hes_X 111 KGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHS-QDVKHVIWHPSEALLASSSYDDT--VRIWKD 182 (330)
T ss_dssp EEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCS-SCEEEEEECSSSSEEEEEETTSC--EEEEEE
T ss_pred EEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCC-CceEEEEECCCCCEEEEEcCCCe--EEEEEC
Confidence 2 3499999977755543 2566777743121 111 233332 34788899886 45556666654 556665
Q ss_pred C
Q 010654 155 P 155 (505)
Q Consensus 155 ~ 155 (505)
.
T Consensus 183 ~ 183 (330)
T 2hes_X 183 Y 183 (330)
T ss_dssp E
T ss_pred C
Confidence 4
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.83 Score=42.81 Aligned_cols=93 Identities=9% Similarity=-0.008 Sum_probs=57.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeee---ecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVL---TPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l---~~~~~~~~-~~ 82 (505)
..|.+|++.++ +....+.. .......+.|+| |+++|+.... ...|.++|+.+++....+ ........ ..
T Consensus 95 g~i~v~d~~~~--~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 95 GIIRIINPITM--QCIKHYVG-HGNAINELKFHPRDPNLLLSVSK---DHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp CEEEEECTTTC--CEEEEEES-CCSCEEEEEECSSCTTEEEEEET---TSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred CEEEEEEchhc--eEeeeecC-CCCcEEEEEECCCCCCEEEEEeC---CCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 46889998764 23334432 233455788999 8888765443 345888899887522233 12222222 34
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
|+|+|+.|+..+.+ ..|.++|+..
T Consensus 169 ~~~~~~~l~~~~~d-----g~i~i~d~~~ 192 (366)
T 3k26_A 169 YDLLGEKIMSCGMD-----HSLKLWRINS 192 (366)
T ss_dssp ECTTSSEEEEEETT-----SCEEEEESCS
T ss_pred ECCCCCEEEEecCC-----CCEEEEECCC
Confidence 99999988766643 3677778764
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.51 E-value=1.8 Score=41.23 Aligned_cols=136 Identities=7% Similarity=0.016 Sum_probs=77.2
Q ss_pred ceEEEEECCCCCCCCeEEEEe----------cCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccc
Q 010654 8 DKAWLHKLEADQSNDICLYHE----------KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV 76 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~----------~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~ 76 (505)
..|.+|++.+........... ....-...+.|+| +++.++.... ...|.+.|+.++. ........
T Consensus 66 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~-~~~~~~~~ 141 (408)
T 4a11_B 66 GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF---DKTLKVWDTNTLQ-TADVFNFE 141 (408)
T ss_dssp SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET---TSEEEEEETTTTE-EEEEEECS
T ss_pred CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC---CCeEEEeeCCCCc-cceeccCC
Confidence 458889997764433322111 0223345788999 6665554332 3468888998876 33333222
Q ss_pred cce-eEEeee---eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEE
Q 010654 77 VGV-DTAASH---RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKIT 150 (505)
Q Consensus 77 ~~~-~~~~s~---dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~ 150 (505)
... ...+++ ++..++..+.. ..|.++++.. +.....+..... .+..+.|.++. ++++...++. +.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~-~~~~~~~~~~~~-~v~~~~~~~~~~~ll~~~~~dg~--i~ 212 (408)
T 4a11_B 142 ETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKS-GSCSHILQGHRQ-EILAVSWSPRYDYILATASADSR--VK 212 (408)
T ss_dssp SCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSS-SCCCEEECCCCS-CEEEEEECSSCTTEEEEEETTSC--EE
T ss_pred CceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCC-cceeeeecCCCC-cEEEEEECCCCCcEEEEEcCCCc--EE
Confidence 222 223555 44455555432 3788888876 333224443333 57788998874 6666666654 67
Q ss_pred EEEcCC
Q 010654 151 TYRLPA 156 (505)
Q Consensus 151 ~~~~~~ 156 (505)
+|++..
T Consensus 213 i~d~~~ 218 (408)
T 4a11_B 213 LWDVRR 218 (408)
T ss_dssp EEETTC
T ss_pred EEECCC
Confidence 788764
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.26 Score=46.39 Aligned_cols=137 Identities=10% Similarity=0.106 Sum_probs=75.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCce-eeeec-ccccee-EEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL-RVLTP-RVVGVD-TAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~-~~l~~-~~~~~~-~~~s 84 (505)
..|.+||+.++. ...++...........+|+|||++|+.... ...|.++|+.++... ..+.. +..... ..|+
T Consensus 149 g~i~~wd~~~~~--~~~~~~~~~~~~i~~~~~~pdg~~lasg~~---dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 149 GTIGFQSYEDDS--QYIVHSAKSDVEYSSGVLHKDSLLLALYSP---DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp CCEEEEESSSSC--EEEEECCCSSCCCCEEEECTTSCEEEEECT---TSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC
T ss_pred CcEEEEECCCCc--EEEEEecCCCCceEEEEECCCCCEEEEEcC---CCEEEEEECCCCCCCccEEeccCCCCEEEEEEe
Confidence 468899997753 233332222222346789999998765432 346888999888622 34443 232222 3499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC--CCCceee--EEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH--RESVKLQ--DIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~i~--~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
|+|..|+..+ . + .+.+.|+....... .+.. .....+. .++|++++.+++....+...+.+|++..
T Consensus 224 ~~g~~l~s~~-~-~----~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 224 DNGYWMVVEC-D-Q----TVVCFDLRKDVGTL-AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp TTSSEEEEEE-S-S----BEEEEETTSSTTCB-SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEe-C-C----eEEEEEcCCCCcce-eecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 9999877666 2 2 67888887522111 1111 0111222 4888887544444222123467777753
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.47 Score=42.76 Aligned_cols=131 Identities=11% Similarity=0.027 Sum_probs=76.0
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGN 88 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~ 88 (505)
+|...|+.|++..... + ++..|-.+ .+++|..|+...+ ..+.++++|.++.+....+.-..+| ..+++||+
T Consensus 76 ~v~~iD~~Tgkv~~~~-l--~~~~FgeG--it~~g~~Ly~ltw--~~~~v~V~D~~Tl~~~~ti~~~~eG--wGLt~Dg~ 146 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-R--LGNIFAEG--LASDGERLYQLTW--TEGLLFTWSGMPPQRERTTRYSGEG--WGLCYWNG 146 (268)
T ss_dssp EEEECCSSCSSCSEEE-E--CTTCCEEE--EEECSSCEEEEES--SSCEEEEEETTTTEEEEEEECSSCC--CCEEEETT
T ss_pred EEEEEECCCCcEEeEE-C--CCCcceeE--EEEeCCEEEEEEc--cCCEEEEEECCcCcEEEEEeCCCce--eEEecCCC
Confidence 3777888887543333 2 33334444 3567777765533 4678999999988633444322222 33678999
Q ss_pred EEEEEEcCCCCCCceEEEeeCCCCCCce-EEEcCCCC--ceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 89 HFFITRRSDELFNSELLACPVDNTSETT-VLIPHRES--VKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 89 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~--~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+||... . ..+|+.+|.+++.... +.++.... ..+.++.|.++.++..... ...+.++|..
T Consensus 147 ~L~vSd-G----s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~--s~~I~vIDp~ 209 (268)
T 3nok_A 147 KLVRSD-G----GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWH--SSDVLEIDPA 209 (268)
T ss_dssp EEEEEC-S----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT--CSEEEEECTT
T ss_pred EEEEEC-C----CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECC--CCeEEEEeCC
Confidence 877653 2 2489999988743322 22322211 1345778887776644333 2467777754
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=95.41 E-value=1 Score=42.34 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=73.7
Q ss_pred ceEEEEECCCCCCC-----CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-E
Q 010654 8 DKAWLHKLEADQSN-----DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~-----~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~ 81 (505)
..|.+|++.+.... ....+.+ .......+.|+|||++++-... ...|.+.|+.+++....+..+..... .
T Consensus 49 ~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v 124 (343)
T 2xzm_R 49 KTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENCFAISSSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSV 124 (343)
T ss_dssp SCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEET---TSEEEEEETTSSCEEEEEECCCSCEEEE
T ss_pred CEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCcEEEEEcCCCCcEEEE
Confidence 45778887553211 1122222 2234457789999998764332 34688889988763344444433332 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC--CCCceeeEEEEeCCE-----------EEEEEecCCeeE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH--RESVKLQDIQLFIDH-----------LAVYEREGGLQK 148 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~d~-----------l~~~~~~~~~~~ 148 (505)
.|+|||+.|+-.+.+ ..+.+.|+.+ ........ .....+..+.+.++. .++....++ .
T Consensus 125 ~~sp~~~~l~s~~~d-----~~i~~wd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--~ 195 (343)
T 2xzm_R 125 AFSPDNRQILSAGAE-----REIKLWNILG--ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG--R 195 (343)
T ss_dssp EECSSTTEEEEEETT-----SCEEEEESSS--CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS--E
T ss_pred EECCCCCEEEEEcCC-----CEEEEEeccC--CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC--E
Confidence 499999988755543 2566777653 11111110 112245667776652 455555565 4
Q ss_pred EEEEEc
Q 010654 149 ITTYRL 154 (505)
Q Consensus 149 l~~~~~ 154 (505)
+.+|+.
T Consensus 196 i~iwd~ 201 (343)
T 2xzm_R 196 LKVWNT 201 (343)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 667774
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.40 E-value=1.4 Score=41.24 Aligned_cols=134 Identities=11% Similarity=0.021 Sum_probs=79.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEe--
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAA-- 83 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~-- 83 (505)
...|.+|++.+........+... ..-...+.|+|||++|+.... ...|.+.|+.++. ...+........ ..|
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~-~~~~~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWSDDGSKVFTASC---DKTAKMWDLSSNQ-AIQIAQHDAPVKTIHWIK 137 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEEC-SSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTE-EEEEEECSSCEEEEEEEE
T ss_pred CCcEEEEEcCCCCceeEEEeccc-cCCEEEEEECcCCCEEEEEcC---CCcEEEEEcCCCC-ceeeccccCceEEEEEEe
Confidence 35688999976322222344332 333457889999999875443 3468888998886 544444332322 337
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+++++.|+..+.+ ..|.++|+.. +.....+.... .+..+.+..+.+++....+ .+.+|++..
T Consensus 138 ~~~~~~l~~~~~d-----g~i~vwd~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~i~~~~~~~ 199 (368)
T 3mmy_A 138 APNYSCVMTGSWD-----KTLKFWDTRS-SNPMMVLQLPE--RCYCADVIYPMAVVATAER---GLIVYQLEN 199 (368)
T ss_dssp CSSCEEEEEEETT-----SEEEEECSSC-SSCSEEEECSS--CEEEEEEETTEEEEEEGGG---CEEEEECSS
T ss_pred CCCCCEEEEccCC-----CcEEEEECCC-CcEEEEEecCC--CceEEEecCCeeEEEeCCC---cEEEEEecc
Confidence 7888766655543 3788889876 33322343322 3456667777655554433 366787763
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.69 Score=43.79 Aligned_cols=126 Identities=11% Similarity=0.079 Sum_probs=73.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cce-eEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGV-DTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~-~~~~s 84 (505)
..|.+||+.+++ ....+.. .......++|+|||++|+.... ...+.+.|+.++.....+.... .+. ...|+
T Consensus 220 g~v~~wd~~~~~--~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~---D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 220 KKAMVWDMRSGQ--CVQAFET-HESDVNSVRYYPSGDAFASGSD---DATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp SCEEEEETTTCC--EEEEECC-CSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred CeEEEEECCCCc--EEEEecC-CCCCeEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 468899998753 3344432 2334457889999998765443 2347778887764222222211 112 23499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCe
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGL 146 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~ 146 (505)
|+|+.|+.-+.+ ..+.++|+.. +...-.+.... ..+..+.|++|+ .+++...++.
T Consensus 294 ~~g~~l~~g~~d-----~~i~vwd~~~-~~~~~~l~~h~-~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 294 LSGRLLFAGYND-----YTINVWDVLK-GSRVSILFGHE-NRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTT-CSEEEEECCCS-SCEEEEEECTTSSCEEEEETTSE
T ss_pred CCCCEEEEEECC-----CcEEEEECCC-CceEEEEECCC-CcEEEEEECCCCCEEEEEcCCCC
Confidence 999977765543 3678888865 33221343333 357889998874 4445555554
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.29 Score=47.20 Aligned_cols=139 Identities=12% Similarity=0.095 Sum_probs=80.7
Q ss_pred CceEEEEECCCCCCCCeEEEEecC-----CceEEEEEEeCCCcEEEEEecc-ccceEEEEEeCCCCC-ceeeee-ccccc
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKD-----DIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE-ELRVLT-PRVVG 78 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~-----~~~~~~~~~SpDg~~i~~~~~~-~~~~~l~~~d~~~~~-~~~~l~-~~~~~ 78 (505)
...|.+|++.++ +....+.... ......+.|+|||+.+++.... .....|.++|+.++. ....+. .....
T Consensus 187 dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 187 SNFASIWDLKAK--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSCEEEEETTTT--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred CCCEEEEECCCC--CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 346889998764 2333333221 2334578999998654444333 223368888988763 233333 23222
Q ss_pred ee-EEeee-eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEc
Q 010654 79 VD-TAASH-RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 79 ~~-~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~ 154 (505)
.. ..|+| +++.|+..+.+ ..|.++|+.. +.....+..... .+..+.|+++. ++++...++ .+.+|++
T Consensus 265 v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~~~-~~~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~d~--~i~iw~~ 335 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRD-----NTVLLWNPES-AEQLSQFPARGN-WCFKTKFAPEAPDLFACASFDN--KIEVQTL 335 (416)
T ss_dssp EEEEEECSSCSSCEEEEESS-----SEEEEECSSS-CCEEEEEECSSS-CCCCEEECTTCTTEEEECCSSS--EEEEEES
T ss_pred eeEEEeCCCCCCeEEEEeCC-----CCEEEeeCCC-CccceeecCCCC-ceEEEEECCCCCCEEEEEecCC--cEEEEEc
Confidence 22 34999 77766655543 3788889876 332223433333 46788999874 555555554 4778888
Q ss_pred CC
Q 010654 155 PA 156 (505)
Q Consensus 155 ~~ 156 (505)
..
T Consensus 336 ~~ 337 (416)
T 2pm9_A 336 QN 337 (416)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.89 Score=44.06 Aligned_cols=134 Identities=10% Similarity=0.054 Sum_probs=76.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|++.+.+ ....+.. .......+.|+|||++|+.... ...|.+.|+.++...+.+........ ..++||
T Consensus 172 ~~i~iwd~~~~~--~~~~~~~-h~~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 172 MTIKLWDFQGFE--CIRTMHG-HDHNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp SCCCEEETTSSC--EEECCCC-CSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CeEEEEeCCCCc--eeEEEcC-CCCCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCCCccEEEEEECCC
Confidence 346678886532 2222222 2233457889999998764433 34688889988763344443332222 348899
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC---------------------EEEEEEecCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID---------------------HLAVYEREGG 145 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d---------------------~l~~~~~~~~ 145 (505)
|+.|+--+.+ ..+.+.|+.. +...-.+.... ..+..+.|.++ .++++...++
T Consensus 246 g~~l~s~s~D-----~~v~vwd~~~-~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 246 GTLIASCSND-----QTVRVWVVAT-KECKAELREHR-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp SSEEEEEETT-----SCEEEEETTT-CCEEEEECCCS-SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred CCEEEEEcCC-----CeEEEEECCC-CceeeEecCCC-ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 9877655543 2566777765 32221333332 24667777663 3455555555
Q ss_pred eeEEEEEEcCC
Q 010654 146 LQKITTYRLPA 156 (505)
Q Consensus 146 ~~~l~~~~~~~ 156 (505)
.+.+|++..
T Consensus 319 --~i~iwd~~~ 327 (410)
T 1vyh_C 319 --TIKMWDVST 327 (410)
T ss_dssp --EEEEEETTT
T ss_pred --eEEEEECCC
Confidence 477888763
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=95.31 E-value=1.4 Score=44.66 Aligned_cols=149 Identities=12% Similarity=0.060 Sum_probs=83.2
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
...+++||||++|+..... ..|.+.|.++.. .+.+........ ..|+||++.|+..+.+ ..+.+.++.+
T Consensus 388 v~~~~~s~dg~~l~~~~~d---~~v~~~~~~~~~-~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~- 457 (577)
T 2ymu_A 388 VRGVAFSPDGQTIASASDD---KTVKLWNRNGQL-LQTLTGHSSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNG- 457 (577)
T ss_dssp EEEEEECTTSSCEEEEETT---SEEEEECTTCCE-EEEEECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTS-
T ss_pred eEEEEECCCCCEEEEEeCC---CEEEEEeCCCCE-EEEecCCCCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCC-
Confidence 3467899999998755432 357777865443 455544433322 3499999988766543 3677778654
Q ss_pred CCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEE
Q 010654 113 SETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRIL 191 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (505)
.... .+..... .+..+.+++|. ++++...++ .+.+|+.+ +..+.. +......+..+.++++++.+
T Consensus 458 ~~~~-~~~~~~~-~v~~~~~spd~~~las~~~d~--~i~iw~~~--~~~~~~--------~~~h~~~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 458 QLLQ-TLTGHSS-SVRGVAFSPDGQTIASASDDK--TVKLWNRN--GQLLQT--------LTGHSSSVRGVAFSPDGQTI 523 (577)
T ss_dssp CEEE-EEECCSS-CEEEEEECTTSCEEEEEETTS--EEEEEETT--SCEEEE--------EECCSSCEEEEEECTTSSCE
T ss_pred CEEE-EEcCCCC-CEEEEEEcCCCCEEEEEeCCC--EEEEEcCC--CCEEEE--------EeCCCCCEEEEEEcCCCCEE
Confidence 2222 3333333 47788998874 445555555 46778754 332221 11111123334567777754
Q ss_pred EEEEecCCCCceEEEEECC
Q 010654 192 RFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 192 ~~~~~~~~~p~~~~~~~~~ 210 (505)
++.+.. ..+.+.+..
T Consensus 524 -~s~~~d---g~v~lwd~~ 538 (577)
T 2ymu_A 524 -ASASDD---KTVKLWNRN 538 (577)
T ss_dssp -EEEETT---SEEEEECTT
T ss_pred -EEEECc---CEEEEEeCC
Confidence 444432 356666653
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.62 Score=52.49 Aligned_cols=157 Identities=9% Similarity=-0.012 Sum_probs=90.2
Q ss_pred ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 32 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
.....++|||||++|+.... ...|.+.|+.++.....+..+...+. ..|+|||+.|+..+.+ ..+.+.|+.
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~---d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~ 687 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGA---DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSA 687 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETT
T ss_pred ccEEEEEECCCCCEEEEEeC---CCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC-----CeEEEEECC
Confidence 34557889999999875543 34588889988863444443333333 3499999988766543 378888987
Q ss_pred CCCCceEEEcCCCCceeeEEEEeC--CE-EEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCccc
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFI--DH-LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFS 187 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~--d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 187 (505)
+ +.....+..... .+..+.|++ +. +++....++ .+.+|++.. +.... .+......+..+.++++
T Consensus 688 ~-~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~sg~~d~--~v~vwd~~~-~~~~~--------~~~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 688 T-GKLVHTYDEHSE-QVNCCHFTNKSNHLLLATGSNDF--FLKLWDLNQ-KECRN--------TMFGHTNSVNHCRFSPD 754 (1249)
T ss_dssp T-CCEEEEEECCSS-CEEEEEECSSSSCCEEEEEETTS--CEEEEETTS-SSEEE--------EECCCSSCEEEEEECSS
T ss_pred C-CceEEEEcCCCC-cEEEEEEecCCCceEEEEEeCCC--eEEEEECCC-cchhh--------eecCCCCCEEEEEEecC
Confidence 6 433324443333 477888877 33 444555554 367888764 22111 11111111223445677
Q ss_pred CCEEEEEEecCCCCceEEEEECCCCc
Q 010654 188 SRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 188 ~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++.++ +.+.. ..+.+.++.+++
T Consensus 755 ~~~l~-s~s~d---g~v~vwd~~~~~ 776 (1249)
T 3sfz_A 755 DELLA-SCSAD---GTLRLWDVRSAN 776 (1249)
T ss_dssp TTEEE-EEESS---SEEEEEEGGGTE
T ss_pred CCEEE-EEECC---CeEEEEeCCCCc
Confidence 77443 44332 456666766554
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=95.28 E-value=1.8 Score=40.03 Aligned_cols=179 Identities=8% Similarity=0.072 Sum_probs=94.0
Q ss_pred ceEEEEECCCCCCC---CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEe
Q 010654 8 DKAWLHKLEADQSN---DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAA 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~---~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~ 83 (505)
..|.+|++.+.... ....+.+ .........|+|||++|+-... ...|.+.|+.+++..+.+..+..... ..|
T Consensus 40 ~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~---D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~ 115 (319)
T 3frx_A 40 KTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGAYALSASW---DKTLRLWDVATGETYQRFVGHKSDVMSVDI 115 (319)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred ccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCCEEEEEeC---CCEEEEEECCCCCeeEEEccCCCcEEEEEE
Confidence 45778887543211 1122332 2234446789999998765443 34588889988863344443333332 348
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-------EEEEEEecCCeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-------HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-------~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+|+++.|+--+.+ ..+.+.++.+ .... .+..... .+..+.+.++ ..++....++ .+.+|++..
T Consensus 116 ~~~~~~l~s~s~D-----~~i~vwd~~~-~~~~-~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~--~i~~wd~~~ 185 (319)
T 3frx_A 116 DKKASMIISGSRD-----KTIKVWTIKG-QCLA-TLLGHND-WVSQVRVVPNEKADDDSVTIISAGNDK--MVKAWNLNQ 185 (319)
T ss_dssp CTTSCEEEEEETT-----SCEEEEETTS-CEEE-EECCCSS-CEEEEEECCC------CCEEEEEETTS--CEEEEETTT
T ss_pred cCCCCEEEEEeCC-----CeEEEEECCC-CeEE-EEeccCC-cEEEEEEccCCCCCCCccEEEEEeCCC--EEEEEECCc
Confidence 9999877655543 2566667754 2111 2222222 3566666653 2455555555 367788753
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+... ..+......+..+.+++++..+ ++.+.. ..+.+.++.+++
T Consensus 186 -~~~~--------~~~~~h~~~v~~~~~sp~g~~l-~s~~~d---g~i~iwd~~~~~ 229 (319)
T 3frx_A 186 -FQIE--------ADFIGHNSNINTLTASPDGTLI-ASAGKD---GEIMLWNLAAKK 229 (319)
T ss_dssp -TEEE--------EEECCCCSCEEEEEECTTSSEE-EEEETT---CEEEEEETTTTE
T ss_pred -chhh--------eeecCCCCcEEEEEEcCCCCEE-EEEeCC---CeEEEEECCCCc
Confidence 1111 1111111112234566777744 344422 467777877665
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=95.21 E-value=2.2 Score=41.66 Aligned_cols=136 Identities=6% Similarity=-0.060 Sum_probs=74.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecccc---------------------------------
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI--------------------------------- 54 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~--------------------------------- 54 (505)
..|.+||+.+. +....+.. .........|+|||++++.......
T Consensus 290 ~~i~vwd~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~ 366 (464)
T 3v7d_B 290 NTLIVWDVAQM--KCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLV 366 (464)
T ss_dssp SCEEEEETTTT--EEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEE
T ss_pred CeEEEEECCCC--cEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEE
Confidence 46889998764 23333332 2334557789999998776553210
Q ss_pred ----ceEEEEEeCCCCCceeeeeccccc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeE
Q 010654 55 ----TRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD 129 (505)
Q Consensus 55 ----~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 129 (505)
...|.+.|+.++. .......... ....++++|+.++..+ . ..+.+.|+.+ ++.-..+.......+..
T Consensus 367 s~s~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~-d-----g~i~iwd~~~-g~~~~~~~~~~~~~v~~ 438 (464)
T 3v7d_B 367 SAAADGSIRGWDANDYS-RKFSYHHTNLSAITTFYVSDNILVSGS-E-----NQFNIYNLRS-GKLVHANILKDADQIWS 438 (464)
T ss_dssp EEETTSEEEEEETTTCC-EEEEEECTTCCCEEEEEECSSEEEEEE-T-----TEEEEEETTT-CCEEESCTTTTCSEEEE
T ss_pred EEeCCCcEEEEECCCCc-eeeeecCCCCccEEEEEeCCCEEEEec-C-----CeEEEEECCC-CcEEehhhccCCCcEEE
Confidence 1123333333322 1111111111 1123677776555443 1 3788888876 33221111222446788
Q ss_pred EEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 130 IQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 130 ~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
+.++++.++.....++...+.++++
T Consensus 439 v~~~~~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 439 VNFKGKTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp EEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EEecCCEEEEEEEeCCeEEEEEeec
Confidence 9999889988888888777777664
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.2 Score=47.70 Aligned_cols=138 Identities=8% Similarity=-0.050 Sum_probs=69.5
Q ss_pred ceEEEEECCCCC-CCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCc---eeeeec-ccccee-E
Q 010654 8 DKAWLHKLEADQ-SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE---LRVLTP-RVVGVD-T 81 (505)
Q Consensus 8 ~~l~~~~lgt~~-~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~---~~~l~~-~~~~~~-~ 81 (505)
..|.+|++.++. ......+.. .......+.|+|||++|+..... ..|.+.|+.++.. .+.+.. ...... .
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGSGA---RVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp SSEEEC------CCCCEEECCC-CSSCEEEEECCTTSSCCEEEESS---SCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred CeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEecC---CeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 458888887653 112233322 23344578899999987765442 3477778777641 344443 232222 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC---------------CceEEEcCCCCceeeEEEEeCCE-EEEEEecCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTS---------------ETTVLIPHRESVKLQDIQLFIDH-LAVYEREGG 145 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~---------------~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~ 145 (505)
.|+|+|+.|+..+.+ ..+.++|+.... ..+.+..-.....+..+.|++++ ++++...++
T Consensus 153 ~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 153 DWHPNNVLLAAGCAD-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp EECTTSSEEEEEESS-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT
T ss_pred EEcCCCCEEEEEeCC-----CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC
Confidence 499999988776654 256666653200 01111111223347788998874 445555555
Q ss_pred eeEEEEEEcCC
Q 010654 146 LQKITTYRLPA 156 (505)
Q Consensus 146 ~~~l~~~~~~~ 156 (505)
.+.+|++..
T Consensus 228 --~i~iwd~~~ 236 (377)
T 3dwl_C 228 --SVTIAYPSA 236 (377)
T ss_dssp --EEC-CEECS
T ss_pred --cEEEEECCC
Confidence 467788764
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.72 Score=42.15 Aligned_cols=131 Identities=8% Similarity=0.051 Sum_probs=77.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|.+|+.+ +....+............|+|+|+ ++... ....|.++|+.+++....+........ ..|+|+
T Consensus 165 ~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 165 KTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGH-FISCS---NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp SCEEEEETT----EEEEEECSSCSSCEEEEEEEETTE-EEEEE---TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CCEEEEecC----ceEEEEeccCcccEEEEEEcCCCe-EEEcc---CCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 457777732 223344432344555788999998 44322 234689999988763333433332222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
| .|+..+.+ ..+.++|+.. +.....+.... ..+..+.|.++..+++...++ .+.+|++..
T Consensus 237 ~-~l~~~~~d-----g~v~iwd~~~-~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~dg--~i~iw~~~~ 296 (313)
T 3odt_A 237 G-DIVSCGED-----RTVRIWSKEN-GSLKQVITLPA-ISIWSVDCMSNGDIIVGSSDN--LVRIFSQEK 296 (313)
T ss_dssp S-CEEEEETT-----SEEEEECTTT-CCEEEEEECSS-SCEEEEEECTTSCEEEEETTS--CEEEEESCG
T ss_pred C-CEEEEecC-----CEEEEEECCC-CceeEEEeccC-ceEEEEEEccCCCEEEEeCCC--cEEEEeCCC
Confidence 9 44433322 4788999876 43333444333 357889998875555666665 477888763
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.89 Score=42.44 Aligned_cols=138 Identities=7% Similarity=0.025 Sum_probs=75.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC---CcEEEEEeccccceEEEEEeCCCCC-ceeeeecccccee-E
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES---KKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-T 81 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD---g~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~ 81 (505)
...|.+|++.+++ ...+.......-...+.|+|| |++|+.... ...|.++|+.++. ....+........ .
T Consensus 43 d~~v~iw~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 117 (357)
T 3i2n_A 43 TGVIQLYEIQHGD--LKLLREIEKAKPIKCGTFGATSLQQRYLATGDF---GGNLHIWNLEAPEMPVYSVKGHKEIINAI 117 (357)
T ss_dssp CEEEEEEEECSSS--EEEEEEEEESSCEEEEECTTCCTTTCCEEEEET---TSCEEEECTTSCSSCSEEECCCSSCEEEE
T ss_pred CcEEEEEeCCCCc--ccceeeecccCcEEEEEEcCCCCCCceEEEecC---CCeEEEEeCCCCCccEEEEEecccceEEE
Confidence 4568999997753 222222122333457789999 677765443 3458888888775 3444443332222 1
Q ss_pred ------EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC---CceeeEEE----EeCC-EEEEEEecCCee
Q 010654 82 ------AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE---SVKLQDIQ----LFID-HLAVYEREGGLQ 147 (505)
Q Consensus 82 ------~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~i~~~~----~~~d-~l~~~~~~~~~~ 147 (505)
.|+|+++.|+..+.+ ..+.++|+.........+.... ...+..+. ++++ .++++...++
T Consensus 118 ~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~-- 190 (357)
T 3i2n_A 118 DGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG-- 190 (357)
T ss_dssp EEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS--
T ss_pred eeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC--
Confidence 257899887766543 3678888876221222333211 22455555 3344 4455555554
Q ss_pred EEEEEEcCC
Q 010654 148 KITTYRLPA 156 (505)
Q Consensus 148 ~l~~~~~~~ 156 (505)
.+.+|++..
T Consensus 191 ~i~i~d~~~ 199 (357)
T 3i2n_A 191 DIKLFDLRN 199 (357)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECcc
Confidence 477888763
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=95.11 E-value=1.2 Score=42.14 Aligned_cols=97 Identities=11% Similarity=0.054 Sum_probs=55.9
Q ss_pred CceEEEEECCCCCC------C-------C-eEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeee
Q 010654 7 PDKAWLHKLEADQS------N-------D-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 72 (505)
Q Consensus 7 ~~~l~~~~lgt~~~------~-------~-~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l 72 (505)
...|.+|++.++.. . . ...+.. ...-...++|||||++|+-.+.. .+-+.+.|+.+++....+
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d--~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQD--GTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETT--CSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEE
Confidence 34688888876420 0 0 233332 22334578899999987644332 223888899888634444
Q ss_pred ec--ccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 73 TP--RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 73 ~~--~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.. ...... ..|+|||+.|+-.+.+ ..+.+.++..
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~ 271 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFN 271 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSC
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccC
Confidence 42 222222 3499999988776653 2566667654
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=95.10 E-value=1.7 Score=40.07 Aligned_cols=134 Identities=7% Similarity=-0.036 Sum_probs=73.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
..|.+|++.+.. ....+.. .......++|+|||++|+.... ...|.+.|+.+......+.....-....|+|++
T Consensus 195 ~~i~i~d~~~~~--~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~---Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 195 KLVKVWNLANCK--LKTNHIG-HTGYLNTVTVSPDGSLCASGGK---DGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp SCEEEEETTTTE--EEEEECC-CSSCEEEEEECTTSSEEEEEET---TCEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred CEEEEEECCCCc--eeeEecC-CCCcEEEEEECCCCCEEEEEeC---CCeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 357788886642 2233322 2223446789999998765433 346888898877522333222211223488877
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc--------CCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIP--------HRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+. .+.. ..+.+.|+.+ +.....+. ......+..++|++|+ .+++...++ .+.+|++.+
T Consensus 269 ~~~~-~~~d-----~~i~iwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg--~v~iW~~~t 337 (340)
T 4aow_A 269 YWLC-AATG-----PSIKIWDLEG-KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN--LVRVWQVTI 337 (340)
T ss_dssp SEEE-EEET-----TEEEEEETTT-TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS--CEEEEEEEC
T ss_pred ceee-ccCC-----CEEEEEECCC-CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC--EEEEEeCCC
Confidence 5443 2221 3677777765 21111111 1112346788898874 555556665 367788764
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.68 Score=49.13 Aligned_cols=137 Identities=8% Similarity=0.094 Sum_probs=77.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.++..+....+.. ...-...+.|+|+ |++|+..... ..|.+.|+.++. ....+........ ..
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~ 106 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 106 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECCCCcccccccccCCCCCeEEEE
Confidence 457888875432222223332 2233457789998 8887655432 347777777764 1222222222222 34
Q ss_pred eeee--CCEEEEEEcCCCCCCceEEEeeCCCCCC-ceEEEcCCCCceeeEEEEeC--------------CEEEEEEecCC
Q 010654 83 ASHR--GNHFFITRRSDELFNSELLACPVDNTSE-TTVLIPHRESVKLQDIQLFI--------------DHLAVYEREGG 145 (505)
Q Consensus 83 ~s~d--g~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~--------------d~l~~~~~~~~ 145 (505)
|+|+ |+.++..+.+ ..+.++|+..... ....+.... ..+..+.|.+ +.++++...++
T Consensus 107 ~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~-~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg 180 (753)
T 3jro_A 107 WAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHA-IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (753)
T ss_dssp ECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCS-SCEEEEEECCCC---------CGGGCCEEEEETTS
T ss_pred ECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCC-CceEEEEecCcccccccccccCCCCCEEEEEECCC
Confidence 9999 8877766643 3788888865221 222333333 3477888887 35566666665
Q ss_pred eeEEEEEEcCC
Q 010654 146 LQKITTYRLPA 156 (505)
Q Consensus 146 ~~~l~~~~~~~ 156 (505)
. +.+|++..
T Consensus 181 ~--I~iwd~~~ 189 (753)
T 3jro_A 181 L--VKIWKYNS 189 (753)
T ss_dssp C--EEEEEEET
T ss_pred e--EEEEeccC
Confidence 4 66777754
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.91 Score=43.52 Aligned_cols=132 Identities=8% Similarity=0.009 Sum_probs=78.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..|++|++.++. ....+... ......+.|+|||++|+.... ...|.++|+.++.....+........ ..|+|+
T Consensus 227 g~i~~~d~~~~~--~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 227 GAIFVYQITEKT--PTGKLIGH-HGPISVLEFNDTNKLLLSASD---DGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp GCEEEEETTCSS--CSEEECCC-SSCEEEEEEETTTTEEEEEET---TSCEEEECSSSBSCSEEECCCSSCEEEEEEETT
T ss_pred CeEEEEEcCCCc--eeeeeccC-CCceEEEEECCCCCEEEEEcC---CCEEEEEECCCCccceEecCCCccEEEEEECCC
Confidence 468899997752 33333322 223457789999998776543 34588889887752333332322222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
| .++..+.. ..|.++++.. +.....+... ...+..+.|+++. ++++...++ .+.+|++.
T Consensus 301 ~-~l~~~~~d-----~~i~i~d~~~-~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg--~i~i~~~~ 360 (425)
T 1r5m_A 301 D-KVISCSMD-----GSVRLWSLKQ-NTLLALSIVD-GVPIFAGRISQDGQKYAVAFMDG--QVNVYDLK 360 (425)
T ss_dssp T-EEEEEETT-----SEEEEEETTT-TEEEEEEECT-TCCEEEEEECTTSSEEEEEETTS--CEEEEECH
T ss_pred C-EEEEEeCC-----CcEEEEECCC-CcEeEecccC-CccEEEEEEcCCCCEEEEEECCC--eEEEEECC
Confidence 8 44444332 3788899876 3332233332 2357788998863 455555554 46778875
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=95.03 E-value=2.2 Score=39.69 Aligned_cols=111 Identities=7% Similarity=0.018 Sum_probs=70.3
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
-+++..|++.+|+++.+. ....|+++++++.. .+.+....-. ....++++++.||+.-.. ..+|+++++++
T Consensus 125 ~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~----~~~I~~~d~dG- 197 (318)
T 3sov_A 125 RAIALDPSSGFMYWTDWG-EVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAK----LNFIHKSNLDG- 197 (318)
T ss_dssp EEEEEEGGGTEEEEEECS-SSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETT----TTEEEEEETTS-
T ss_pred cEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECC----CCEEEEEcCCC-
Confidence 466788888888776533 35689999998764 4444322111 123488999999988643 35999999986
Q ss_pred CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 113 SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
...+.++.... ....+++.+.+.+|++-..+ .++..++..
T Consensus 198 ~~~~~~~~~~~-~~P~glav~~~~lywtd~~~--~~V~~~~~~ 237 (318)
T 3sov_A 198 TNRQAVVKGSL-PHPFALTLFEDILYWTDWST--HSILACNKY 237 (318)
T ss_dssp CSCEEEECSCC-SCEEEEEEETTEEEEEETTT--TEEEEEETT
T ss_pred CceEEEecCCC-CCceEEEEeCCEEEEEecCC--CeEEEEECC
Confidence 33332443232 23567788888888774433 356666653
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=95.02 E-value=1.1 Score=41.84 Aligned_cols=134 Identities=7% Similarity=0.015 Sum_probs=78.5
Q ss_pred eEEEEECCCCCCCCeEEEE-ec---CCceEEEEEEeCC----CcEEEEEeccccceEEEEEeCCCCCceeeeecccccee
Q 010654 9 KAWLHKLEADQSNDICLYH-EK---DDIYSLGLQASES----KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD 80 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~-~~---~~~~~~~~~~SpD----g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 80 (505)
.|.+|++.+++ ....+. .. ...-.....|+|| |++|+.... ...|.++|+.+++....+........
T Consensus 45 ~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~~~~~~~~~i~ 119 (366)
T 3k26_A 45 RVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS---RGIIRIINPITMQCIKHYVGHGNAIN 119 (366)
T ss_dssp EEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET---TCEEEEECTTTCCEEEEEESCCSCEE
T ss_pred EEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC---CCEEEEEEchhceEeeeecCCCCcEE
Confidence 58888887643 222222 11 1133457789999 666655433 34688899988763333433332332
Q ss_pred -EEeee-eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc--CCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 81 -TAASH-RGNHFFITRRSDELFNSELLACPVDNTSETTVLIP--HRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 81 -~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
..|+| +++.|+..+.+ ..|.++|+.. +.....+. ......+..+.|+++. .+++...++ .+.+|++.
T Consensus 120 ~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~ 191 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVSKD-----HALRLWNIQT-DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH--SLKLWRIN 191 (366)
T ss_dssp EEEECSSCTTEEEEEETT-----SCEEEEETTT-TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS--CEEEEESC
T ss_pred EEEECCCCCCEEEEEeCC-----CeEEEEEeec-CeEEEEecccccccCceeEEEECCCCCEEEEecCCC--CEEEEECC
Confidence 34999 77776655543 3788888875 33322331 2234457889998863 555555554 46778876
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=95.00 E-value=0.95 Score=42.58 Aligned_cols=136 Identities=10% Similarity=-0.024 Sum_probs=74.7
Q ss_pred ceEEEEECCCCCCCC-eEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC------------------CCCc
Q 010654 8 DKAWLHKLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS------------------KPEE 68 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~-~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~------------------~~~~ 68 (505)
..+.+|++.+..... ...+..........+.|+|||++|+.... ...++++|+. .+..
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC---DFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET---TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC---CCCEEEEEcccccccccccccccccccchhhh
Confidence 346777776542111 11121122334557899999998776543 2357777753 3321
Q ss_pred eeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCee
Q 010654 69 LRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQ 147 (505)
Q Consensus 69 ~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~ 147 (505)
...+....... ...|+|+|+.|+..+.+ ..|.++|+.. +.....+... ...+..+.|+++..+++...++.
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~d~~- 266 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADK-KMAVATLASE-TLPLLAVTFITESSLVAAGHDCF- 266 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGG-TTEEEEEECS-SCCEEEEEEEETTEEEEEETTSS-
T ss_pred eEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCC-CceeEEEccC-CCCeEEEEEecCCCEEEEEeCCe-
Confidence 22232222222 23499999987776643 3788888865 3332234333 23577888887754554445553
Q ss_pred EEEEEEcC
Q 010654 148 KITTYRLP 155 (505)
Q Consensus 148 ~l~~~~~~ 155 (505)
+.+|++.
T Consensus 267 -i~i~~~~ 273 (372)
T 1k8k_C 267 -PVLFTYD 273 (372)
T ss_dssp -CEEEEEE
T ss_pred -EEEEEcc
Confidence 5567765
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=94.98 E-value=1.1 Score=41.63 Aligned_cols=133 Identities=9% Similarity=-0.008 Sum_probs=71.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
..|.+|++.+.+ ....+... ......+.|||||++|+.... ...|.+.|+.+++....+.....-....|+|+|
T Consensus 176 ~~i~~wd~~~~~--~~~~~~~h-~~~v~~~~~sp~g~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~ 249 (319)
T 3frx_A 176 KMVKAWNLNQFQ--IEADFIGH-NSNINTLTASPDGTLIASAGK---DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNR 249 (319)
T ss_dssp SCEEEEETTTTE--EEEEECCC-CSCEEEEEECTTSSEEEEEET---TCEEEEEETTTTEEEEEEECCSCEEEEEECSSS
T ss_pred CEEEEEECCcch--hheeecCC-CCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCC
Confidence 357788886542 22223222 223446789999998765433 346888899887523333322211224499999
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-------CCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-------ESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
..|+..+.. .+.+++++. ......+... ....+..++|++|+ .+++...++. +.+|++.
T Consensus 250 ~~la~~~~~------~i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~--i~vWd~~ 316 (319)
T 3frx_A 250 YWLAAATAT------GIKVFSLDP-QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNV--IRVWQVM 316 (319)
T ss_dssp SEEEEEETT------EEEEEEETT-EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSC--EEEEEEE
T ss_pred CEEEEEcCC------CcEEEEeCc-CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCce--EEEEEEe
Confidence 988766532 233444432 1110011111 11235578888874 4455556654 5667764
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=94.95 E-value=2.4 Score=39.53 Aligned_cols=183 Identities=12% Similarity=0.098 Sum_probs=101.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCc-eeeeeccccce-eEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~-~~~~s~ 85 (505)
..|.+.++.+...+..++... ....+.++|.+.+..|+++-. ....|++++++++.. ...+....... ...+.+
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~--~~~~~~ld~d~~~~~lyw~D~--~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGG--LEDAAAVDFVFSHGLIYWSDV--SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEE--EEEEEEEEEEGGGTEEEEEET--TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred CeEEEEECCCCceEEEEEecC--CCccEEEEEEeCCCEEEEEEC--CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 468888886543234444432 223457789998888877643 245799999887641 12222211111 133666
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
.++.||+.... ..+|.++++++ ...+.++..... ...++..++ +.+|++-. ....+++.++++ |...+.
T Consensus 89 ~~g~ly~~d~~----~~~I~~~~~dG-~~~~~l~~~~~~-~P~giavdp~~g~ly~td~-~~~~~I~r~~~d--G~~~~~ 159 (318)
T 3sov_A 89 LGEKLYWTDSE----TNRIEVSNLDG-SLRKVLFWQELD-QPRAIALDPSSGFMYWTDW-GEVPKIERAGMD--GSSRFI 159 (318)
T ss_dssp TTTEEEEEETT----TTEEEEEETTS-CSCEEEECSSCS-SEEEEEEEGGGTEEEEEEC-SSSCEEEEEETT--SCSCEE
T ss_pred CCCeEEEEECC----CCEEEEEECCC-CcEEEEEeCCCC-CccEEEEeCCCCEEEEEec-CCCCEEEEEEcC--CCCeEE
Confidence 68888887543 24899999876 333334443333 356777775 45555532 223567777765 432222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.. ..+.. + .++.++++++.++++-+ .-..|+++++.+..
T Consensus 160 ~~~-~~l~~--P----nglavd~~~~~lY~aD~---~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 160 IIN-SEIYW--P----NGLTLDYEEQKLYWADA---KLNFIHKSNLDGTN 199 (318)
T ss_dssp EEC-SSCSC--E----EEEEEETTTTEEEEEET---TTTEEEEEETTSCS
T ss_pred EEE-CCCCC--c----cEEEEeccCCEEEEEEC---CCCEEEEEcCCCCc
Confidence 110 01111 1 12345677787776643 34578888886543
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=94.95 E-value=1.4 Score=42.35 Aligned_cols=134 Identities=12% Similarity=0.037 Sum_probs=75.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeee-
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH- 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~- 85 (505)
..|.+|++.++ +....+.+. ......+.|+|||++|+.... ...+.+.|+.+++ .........+. ...|+|
T Consensus 145 ~~i~iwd~~~~--~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~-~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 145 RLIRIWDIENR--KIVMILQGH-EQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQ-CSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp SCEEEEETTTT--EEEEEECCC-SSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTE-EEEEEECSSCEEEEEECST
T ss_pred CeEEEEECCCC--cEEEEEccC-CCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCe-eEEEEEcCCCcEEEEEECC
Confidence 46888998764 233344332 223457889999998764433 3457888998875 33222222232 234888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc------CCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIP------HRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
||+.|+.-+.+ ..+.++|+.+ +.....+. ..-...+..+.|++++ .+++...++ .+.+|++..
T Consensus 218 ~~~~l~~~s~d-----~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~--~v~~wd~~~ 287 (393)
T 1erj_A 218 DGKYIAAGSLD-----RAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR--SVKLWNLQN 287 (393)
T ss_dssp TCCEEEEEETT-----SCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS--EEEEEEC--
T ss_pred CCCEEEEEcCC-----CcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC--EEEEEECCC
Confidence 77766655533 2567778765 32111221 1112357788898874 455555565 366787753
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.6 Score=44.00 Aligned_cols=133 Identities=9% Similarity=0.068 Sum_probs=70.9
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCcee---eeecccccee-EEee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR---VLTPRVVGVD-TAAS 84 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~---~l~~~~~~~~-~~~s 84 (505)
.+.+|++.++..+....+.+ .......++|+|||++|+..... ..|.+.|+.++.... .+........ ..|+
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGNLLATCSRD---KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp CEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred cEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCCEEEEEECC---CeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 46677775532112223322 22344578999999987654432 346677776654122 2222222222 3499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCce--EEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETT--VLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~ 154 (505)
|+|+.|+.-+.+ + .+.+++... +... ..+... ...+..+.|++++ .++....++. +.+|++
T Consensus 160 p~~~~l~s~s~d-~----~i~~w~~~~-~~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~~--v~iW~~ 223 (345)
T 3fm0_A 160 PSQELLASASYD-D----TVKLYREEE-DDWVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDRT--VRIWRQ 223 (345)
T ss_dssp SSSSCEEEEETT-S----CEEEEEEET-TEEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSC--EEEEEE
T ss_pred CCCCEEEEEeCC-C----cEEEEEecC-CCEEEEEEecCC-CCceEEEEECCCCCEEEEEeCCCe--EEEecc
Confidence 999977766643 2 455555543 2111 123322 2357889998874 4555566664 455654
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.87 E-value=2.2 Score=38.86 Aligned_cols=135 Identities=12% Similarity=0.124 Sum_probs=75.3
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
..|++||+.|++ ...++... .......+.|+|||++|+.... ...|.+.|+.+++..+.+.... .....++++
T Consensus 45 ~tV~iWd~~tg~--~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~~~~~~h~-~~~~~~~~~ 118 (318)
T 4ggc_A 45 NSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRLRNMTSHS-ARVGSLSWN 118 (318)
T ss_dssp TEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECCS-SCEEEEEEE
T ss_pred CEEEEEECCCCC--EEEEEEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeEEEecCcc-ceEEEeecC
Confidence 458999998863 44455432 3345567899999998865433 3468888998886233333222 333457788
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+..++.-+.. ..+...+..........+..... .+....+..+ ..++....++. +.+|++..
T Consensus 119 ~~~l~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~--i~iwd~~~ 181 (318)
T 4ggc_A 119 SYILSSGSRS-----GHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNL--VNVWPSAP 181 (318)
T ss_dssp TTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSC--EEEEESSC
T ss_pred CCEEEEEecC-----CceEeeecCCCceeEEEEcCccC-ceEEEEEcCCCCEEEEEecCcc--eeEEECCC
Confidence 8766654433 24444454431111112222222 3455566654 45555555553 66788764
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.71 Score=44.16 Aligned_cols=135 Identities=11% Similarity=0.058 Sum_probs=76.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc---c-----e
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV---G-----V 79 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~---~-----~ 79 (505)
..|.+||+.... +....+.+. ......+.|+|||++|+..+. ...|.+.|+.++.....+..... . .
T Consensus 228 ~~v~~wd~~~~~-~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~---D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 228 TTVRLWDLRITS-RAVRTYHGH-EGDINSVKFFPDGQRFGTGSD---DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp SCEEEEETTTTC-CCCEEECCC-SSCCCEEEECTTSSEEEEECS---SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCS
T ss_pred CeEEEEECCCCC-cceEEECCc-CCCeEEEEEecCCCeEEEEcC---CCeEEEEECCCCcEEEEecccccccccccCceE
Confidence 457889987432 333444432 222336789999998764332 34578888888752222221111 0 1
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc---CCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP---HRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
...|+|+|+.|+.-+.. ..+++.|+.. ++....+. ..-...+..+.|++|+ .+++...++. +.+|++.
T Consensus 303 ~~~~s~~g~~l~~g~~d-----g~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~--i~iW~~~ 374 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYSN-----GDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN--LKIWAFS 374 (380)
T ss_dssp EEEECSSSSEEEEECTT-----SCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC--EEEEECC
T ss_pred EEEECCCCCEEEEEECC-----CCEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC--EEEEecC
Confidence 23499999977654432 3788888765 32221221 1223357788898874 4445555653 6678775
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=94.82 E-value=2 Score=38.13 Aligned_cols=134 Identities=10% Similarity=0.051 Sum_probs=75.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
.+.|...|+.|++. ..-..-+...|-.+. +++|..|+... ...+.++++|.++.+....+.-...| ..+++|
T Consensus 42 ~S~v~~vD~~tgkv--~~~~~l~~~~fgeGi--~~~~~~ly~lt--w~~~~v~v~D~~tl~~~~ti~~~~~G--wglt~d 113 (243)
T 3mbr_X 42 RSSVRKVDLETGRI--LQRAEVPPPYFGAGI--VAWRDRLIQLT--WRNHEGFVYDLATLTPRARFRYPGEG--WALTSD 113 (243)
T ss_dssp SCEEEEEETTTCCE--EEEEECCTTCCEEEE--EEETTEEEEEE--SSSSEEEEEETTTTEEEEEEECSSCC--CEEEEC
T ss_pred CceEEEEECCCCCE--EEEEeCCCCcceeEE--EEeCCEEEEEE--eeCCEEEEEECCcCcEEEEEeCCCCc--eEEeeC
Confidence 45788888887632 222222223344443 45567766553 34678999999987633344322222 346789
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCce-EEEcCCC--CceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETT-VLIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~--~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|+.||+. + +. .+|+.+|.+++.... +.++... -..+.++.|.++.++..... ...+.++|..
T Consensus 114 g~~L~vS-d--gs--~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~--s~~I~vIDp~ 178 (243)
T 3mbr_X 114 DSHLYMS-D--GT--AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWL--TSRIARIDPA 178 (243)
T ss_dssp SSCEEEE-C--SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT--TTEEEEECTT
T ss_pred CCEEEEE-C--CC--CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECC--CCeEEEEECC
Confidence 9887765 3 22 489999988744322 2232211 12345778887776644333 2456777754
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.79 Score=46.37 Aligned_cols=108 Identities=8% Similarity=0.071 Sum_probs=61.4
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--c-----eeeeecc----cccee-EEeeeeCCEEEEEEcCCCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPE--E-----LRVLTPR----VVGVD-TAASHRGNHFFITRRSDELFN 101 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~-----~~~l~~~----~~~~~-~~~s~dg~~l~~~~~~~~~~~ 101 (505)
...++|||||++|+.... ...|-+.|+.++. + +..+... ...+. ..||||| ++..+. +
T Consensus 132 v~svafSPDG~~LAsgs~---DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~-D---- 201 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNE---DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS-N---- 201 (588)
T ss_dssp EEEEEECSSSSCEEEEET---TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET-T----
T ss_pred EEEEEEcCCCCEEEEEcC---CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC-C----
Confidence 447899999999876644 3457778887774 1 1333211 11222 3499998 443333 2
Q ss_pred ceEEEeeCCCCCCc-eE-EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 102 SELLACPVDNTSET-TV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 102 ~~l~~~~~~~~~~~-~~-~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
..+++.++.+.... .+ .+.......+.+++|.++.++.. . + ..+.+|++.
T Consensus 202 ~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa-~-~--~tIkLWd~~ 253 (588)
T 2j04_A 202 NSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLT-C-P--GYVHKIDLK 253 (588)
T ss_dssp CCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEE-C-S--SEEEEEETT
T ss_pred CeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEE-e-C--CeEEEEECC
Confidence 36777787652211 11 34222223577888884444433 3 3 468899976
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.65 Score=45.19 Aligned_cols=95 Identities=9% Similarity=0.028 Sum_probs=56.0
Q ss_pred ceEEEEECCCCCCC--CeEEEEecCC-----------ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCC-CCceeeee
Q 010654 8 DKAWLHKLEADQSN--DICLYHEKDD-----------IYSLGLQASESKKFLFIASESKITRFVFYLDVSK-PEELRVLT 73 (505)
Q Consensus 8 ~~l~~~~lgt~~~~--~~~~~~~~~~-----------~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~-~~~~~~l~ 73 (505)
..|.+|++.++... ...++..... .....+.|+|||++|+.... ..|.+.|+.+ +.....+.
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEEEEETTCCSSCSCCEE
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC----CeEEEEeCCCCccccceee
Confidence 46889999775321 1345543321 13457899999999874432 6788889876 43233333
Q ss_pred ccccce----------------eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 74 PRVVGV----------------DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 74 ~~~~~~----------------~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
....-. ...|+|||+.|+..+ .+ ..|+++|+.+
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s-~d----g~v~iwd~~~ 373 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS-YN----NFFRMFDRNT 373 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC-ST----TEEEEEETTT
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEec-cC----CEEEEEEcCC
Confidence 222100 145999999884333 22 3777778765
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=94.66 E-value=0.33 Score=44.50 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=54.2
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC-chhHHHcccccCCcchH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGKFLKKKNTF 323 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~-g~~~~~~~~~~~~~~~~ 323 (505)
...+++.... .+.-+||.+||-.. ....+.+.++.+...+.. .++. .+-|.. ......
T Consensus 62 ~~~g~v~~~~------~~~~iVvafRGT~~---------~~d~~~d~~~~~~~~~~~-~~~~vh~Gf~~-----~~~~~~ 120 (279)
T 1tia_A 62 DTAGYIAVDH------TNSAVVLAFRGSYS---------VRNWVADATFVHTNPGLC-DGCLAELGFWS-----SWKLVR 120 (279)
T ss_pred CceEEEEEEC------CCCEEEEEEeCcCC---------HHHHHHhCCcEeecCCCC-CCCccChhHHH-----HHHHHH
Confidence 3456665533 23467778888632 234566777776654432 2211 011111 001234
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
+++...++.+.++. ...+|.+.|||+||.++..++...
T Consensus 121 ~~~~~~l~~~~~~~--p~~~i~vtGHSLGGalA~l~a~~l 158 (279)
T 1tia_A 121 DDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATDL 158 (279)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHHH
Confidence 56666666666542 125899999999999998887753
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.57 E-value=2.7 Score=40.36 Aligned_cols=109 Identities=10% Similarity=0.078 Sum_probs=69.9
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
-++++.|++.+|+++.+.. ...|+++++++.. .+.+....-. .-..++|+++.||+.... ..+|+++++++
T Consensus 205 ~giavdp~~g~ly~td~~~-~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD~~----~~~I~~~d~dG- 277 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWGN-TPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAK----HHVIERANLDG- 277 (386)
T ss_dssp EEEEEETTTTEEEEEECSS-SCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEETT----TTEEEEECTTS-
T ss_pred cEEEEEcCCCeEEEeccCC-CCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEECC----CCEEEEEeCCC-
Confidence 4677889888888775432 4789999998765 4444322111 123489999999988643 25899999876
Q ss_pred CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 113 SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
...+.++..... ...++..+.+.+|++-..++ ++..++
T Consensus 278 ~~~~~~~~~~~~-~P~giav~~~~ly~td~~~~--~V~~~~ 315 (386)
T 3v65_B 278 SHRKAVISQGLP-HPFAITVFEDSLYWTDWHTK--SINSAN 315 (386)
T ss_dssp CSCEEEECSSCS-SEEEEEEETTEEEEEETTTT--EEEEEE
T ss_pred CeeEEEEECCCC-CceEEEEECCEEEEeeCCCC--eEEEEE
Confidence 333324443333 35677778888877765443 455565
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.50 E-value=2 Score=40.78 Aligned_cols=136 Identities=10% Similarity=0.034 Sum_probs=76.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC---CcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEe
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES---KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAA 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD---g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~ 83 (505)
..|.+|++.++ +....+.. ..-.....++|+ +..++.... ...|+++|+.++.....+........ ..|
T Consensus 122 ~~i~iwd~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 122 KTLKVWDTNTL--QTADVFNF--EETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp SEEEEEETTTT--EEEEEEEC--SSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred CeEEEeeCCCC--ccceeccC--CCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 46888998764 23333332 223345567774 446655433 34688889888763344443332322 349
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc--------------CCCCceeeEEEEeCCE-EEEEEecCCeeE
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP--------------HRESVKLQDIQLFIDH-LAVYEREGGLQK 148 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~d~-l~~~~~~~~~~~ 148 (505)
+|+++++++....+ ..+.++|+.........+. ......+..+.|++++ .+++...++ .
T Consensus 195 ~~~~~~ll~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~ 268 (408)
T 4a11_B 195 SPRYDYILATASAD----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN--R 268 (408)
T ss_dssp CSSCTTEEEEEETT----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS--C
T ss_pred CCCCCcEEEEEcCC----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC--e
Confidence 99999766655443 3677778754211111110 1123357788998874 444555554 4
Q ss_pred EEEEEcCC
Q 010654 149 ITTYRLPA 156 (505)
Q Consensus 149 l~~~~~~~ 156 (505)
+.+|++..
T Consensus 269 i~vwd~~~ 276 (408)
T 4a11_B 269 MRLWNSSN 276 (408)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 77888764
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.41 E-value=3.4 Score=38.96 Aligned_cols=133 Identities=10% Similarity=0.071 Sum_probs=78.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~ 85 (505)
.+|++.++... ..+.+.. .+...--+.++.|++..|+++.+.. ...|+++++++.. .+.+....-. .-..++|
T Consensus 138 ~~I~~~~~dG~--~~~~l~~-~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~ 212 (349)
T 3v64_C 138 SRIEVANLDGA--HRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSG-RRIIADTHLFWPNGLTIDY 212 (349)
T ss_dssp TEEEEEETTSC--SCEEEEC-TTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCS-CEESCCSSCSCEEEEEEET
T ss_pred CeEEEEcCCCC--ceEEEEe-CCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCC-cEEEEECCCCCcceEEEeC
Confidence 35666665332 2233332 2222234678899888888875432 4789999998765 4444322111 1234888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
+++.||+.... ..+|+++++++ ...+.++..... ...+++.+.+.++++-..++ ++..++
T Consensus 213 ~~~~lY~aD~~----~~~I~~~~~dG-~~~~~~~~~~~~-~P~giav~~~~ly~td~~~~--~V~~~~ 272 (349)
T 3v64_C 213 AGRRMYWVDAK----HHVIERANLDG-SHRKAVISQGLP-HPFAITVFEDSLYWTDWHTK--SINSAN 272 (349)
T ss_dssp TTTEEEEEETT----TTEEEEEETTS-CSCEEEECSSCS-SEEEEEEETTEEEEEETTTT--EEEEEE
T ss_pred CCCEEEEEECC----CCEEEEEeCCC-CceEEEEeCCCC-CceEEEEECCEEEEecCCCC--eEEEEE
Confidence 99999988643 25899999886 333324443333 35677778888877755443 455555
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=94.28 E-value=0.43 Score=46.90 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=62.6
Q ss_pred EEEEEEeCCCcEEEEEe-ccccceEEEEEeCCCC-----Cc------eeeeeccccce-eEEeeee-CCEEEEEEcCCCC
Q 010654 34 SLGLQASESKKFLFIAS-ESKITRFVFYLDVSKP-----EE------LRVLTPRVVGV-DTAASHR-GNHFFITRRSDEL 99 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~-~~~~~~~l~~~d~~~~-----~~------~~~l~~~~~~~-~~~~s~d-g~~l~~~~~~~~~ 99 (505)
...++|||||++|++.. .......|.++|+.++ .. .+.+..+.... ...|+|+ ++.|+-.+.+
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D--- 171 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD--- 171 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT---
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC---
Confidence 34678999999988753 2334556777776553 10 11122122222 2349998 4555444432
Q ss_pred CCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 100 FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
..|.+.|+.. +....... .....+..++|++++ .+++...++ .+.+|++.
T Consensus 172 --g~v~iwD~~~-~~~~~~~~-~~~~~v~~v~wspdg~~lasgs~dg--~v~iwd~~ 222 (434)
T 2oit_A 172 --GSIAVLQVTE-TVKVCATL-PSTVAVTSVCWSPKGKQLAVGKQNG--TVVQYLPT 222 (434)
T ss_dssp --SCEEEEEESS-SEEEEEEE-CGGGCEEEEEECTTSSCEEEEETTS--CEEEECTT
T ss_pred --CeEEEEEcCC-Ccceeecc-CCCCceeEEEEcCCCCEEEEEcCCC--cEEEEccC
Confidence 3678888875 32211111 112357889999874 444455555 46778765
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=94.25 E-value=0.42 Score=45.58 Aligned_cols=115 Identities=9% Similarity=0.062 Sum_probs=65.8
Q ss_pred CCCcEEEEEeccc---cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcC-----CCCCCceEEEeeCCCC
Q 010654 41 ESKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS-----DELFNSELLACPVDNT 112 (505)
Q Consensus 41 pDg~~i~~~~~~~---~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~-----~~~~~~~l~~~~~~~~ 112 (505)
+|++++++..... ....++++|.++++....+.... +....+||||+++|..... .+.....+.++|+++.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~-~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAF-NGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCE-EEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCC-CCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 6888877665332 24589999999886222332222 2234599999999988641 1112246888998753
Q ss_pred CCceEE-EcCCC---CceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 113 SETTVL-IPHRE---SVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 113 ~~~~~~-~~~~~---~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
.....+ +.... ......+.+++|+ .+++.+......+.++++.+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 222212 22110 1124467777764 44444544345688898864
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=94.24 E-value=3.2 Score=37.86 Aligned_cols=137 Identities=9% Similarity=0.094 Sum_probs=72.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.+...+....+.+. ......++|+++ |++|+-.+. ...|.+.|+.++. ....+........ ..
T Consensus 31 ~~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g~~l~s~s~---D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 31 KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSY---DGKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp SCEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEET---TTEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred CEEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcCCEEEEEcC---CCEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 4578888854322333444432 223446789874 776653332 2346777777764 1222222222222 34
Q ss_pred eeee--CCEEEEEEcCCCCCCceEEEeeCCCCCCc-eEEEcCCCCceeeEEEEeCC--------------EEEEEEecCC
Q 010654 83 ASHR--GNHFFITRRSDELFNSELLACPVDNTSET-TVLIPHRESVKLQDIQLFID--------------HLAVYEREGG 145 (505)
Q Consensus 83 ~s~d--g~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~d--------------~l~~~~~~~~ 145 (505)
|+|+ |..|+..+.+ ..+.++++...... ...+.... ..+..+.|.++ .++++...++
T Consensus 107 ~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 107 WAPHEYGPMLLVASSD-----GKVSVVEFKENGTTSPIIIDAHA-IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp ECCGGGCSEEEEEETT-----SEEEEEEBCSSSCBCCEEEECCS-SCEEEEEECCCC------------CCEEEEEETTS
T ss_pred eCcCCCCcEEEEEECC-----CcEEEEEecCCCceeeeeeeccc-CccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 8997 7766655433 36777777642211 11233222 24667788775 3555666665
Q ss_pred eeEEEEEEcCC
Q 010654 146 LQKITTYRLPA 156 (505)
Q Consensus 146 ~~~l~~~~~~~ 156 (505)
. +.+|++..
T Consensus 181 ~--v~lwd~~~ 189 (297)
T 2pm7_B 181 L--VKIWKYNS 189 (297)
T ss_dssp C--EEEEEEET
T ss_pred c--EEEEEEcC
Confidence 4 56677653
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.24 E-value=1.7 Score=46.08 Aligned_cols=136 Identities=11% Similarity=0.087 Sum_probs=76.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.++.......+.. .......+.|+|+ |+.++.... ...|.+.|+.++. ....+........ ..
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~ 152 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 152 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCCCCEEEECCSSCEEEEE
T ss_pred CeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCcceeEeecCCCceEEEE
Confidence 457888886642112222221 2334557889999 888766543 3468888887764 1222222222222 33
Q ss_pred eee-------------eCCEEEEEEcCCCCCCceEEEeeCCCCCCceE----EEcCCCCceeeEEEEeCC----EEEEEE
Q 010654 83 ASH-------------RGNHFFITRRSDELFNSELLACPVDNTSETTV----LIPHRESVKLQDIQLFID----HLAVYE 141 (505)
Q Consensus 83 ~s~-------------dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d----~l~~~~ 141 (505)
|+| ||+.++..+.+ ..+.++|+.. +...+ .+... ...+..+.|+++ .++++.
T Consensus 153 ~~p~~~~~~~~~~~~~d~~~l~sgs~d-----g~I~iwd~~~-~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 153 WAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNS-DAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp ECCCC---------CGGGCCEEEEETT-----SCEEEEEEET-TTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEE
T ss_pred ecCcccccccccccCCCCCEEEEEECC-----CeEEEEeccC-CcccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEE
Confidence 888 57766665543 2567777654 22221 22322 335788999887 455555
Q ss_pred ecCCeeEEEEEEcCC
Q 010654 142 REGGLQKITTYRLPA 156 (505)
Q Consensus 142 ~~~~~~~l~~~~~~~ 156 (505)
..++. +.+|++..
T Consensus 226 s~Dg~--I~iwd~~~ 238 (753)
T 3jro_A 226 SQDRT--CIIWTQDN 238 (753)
T ss_dssp ESSSC--EEEEEESS
T ss_pred ecCCE--EEEecCCC
Confidence 66653 67788764
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=94.10 E-value=3.7 Score=38.08 Aligned_cols=181 Identities=14% Similarity=0.117 Sum_probs=97.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCC---Cceeeeeccc-cc-eeEE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP---EELRVLTPRV-VG-VDTA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~---~~~~~l~~~~-~~-~~~~ 82 (505)
..|.+.++.+.. .+.+.. ....-.+++|++++..|++.... ...|+++++++. .....+.... .. ....
T Consensus 10 ~~I~~i~~~~~~--~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 10 HEVRKMTLDRSE--YTSLIP--NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (316)
T ss_dssp SSEEEEETTSCC--CEEEEC--SCSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred CeEEEEECCCcc--eEehhc--CCCceEEEEEEeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence 357888886642 333332 22334578999988888876433 567999998871 2133333211 11 1123
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
+++.++.||+.... ..+|.++++++ .....++..... ...++..++ +.+|++- .....++..++++ |..
T Consensus 84 vd~~~~~ly~~d~~----~~~I~~~~~~g-~~~~~~~~~~~~-~P~~iavdp~~g~ly~~d-~~~~~~I~~~~~d--G~~ 154 (316)
T 1ijq_A 84 VDWIHSNIYWTDSV----LGTVSVADTKG-VKRKTLFRENGS-KPRAIVVDPVHGFMYWTD-WGTPAKIKKGGLN--GVD 154 (316)
T ss_dssp EETTTTEEEEEETT----TTEEEEEETTS-SSEEEEEECTTC-CEEEEEEETTTTEEEEEE-CSSSCEEEEEETT--SCC
T ss_pred EeecCCeEEEEECC----CCEEEEEeCCC-CceEEEEECCCC-CcceEEeCCCCCEEEEEc-cCCCCeEEEEcCC--CCC
Confidence 66668888887543 24899999876 333334443333 456777774 3555543 3223567777765 432
Q ss_pred ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 161 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.+.. ..+.. + .++.++++++.+++.-+. -..|+.+++.+..
T Consensus 155 ~~~~~~-~~~~~--P----~gla~d~~~~~lY~~D~~---~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 155 IYSLVT-ENIQW--P----NGITLDLLSGRLYWVDSK---LHSISSIDVNGGN 197 (316)
T ss_dssp EEEEEC-SSCSC--E----EEEEEETTTTEEEEEETT---TTEEEEEETTSCS
T ss_pred eEEEEE-CCCCC--c----eEEEEeccCCEEEEEECC---CCeEEEEecCCCc
Confidence 221110 01111 1 123456667777765432 3578888886543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=94.09 E-value=2.4 Score=39.51 Aligned_cols=115 Identities=7% Similarity=0.130 Sum_probs=63.2
Q ss_pred EEEEEEeCCCcEEEEEecccc---------------------ceEEEEEeCCCCCceeeeecc-c-cc-eeEEeeeeCCE
Q 010654 34 SLGLQASESKKFLFIASESKI---------------------TRFVFYLDVSKPEELRVLTPR-V-VG-VDTAASHRGNH 89 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~---------------------~~~l~~~d~~~~~~~~~l~~~-~-~~-~~~~~s~dg~~ 89 (505)
..+++++|||+.++....... ...|+++|.++++ +...... . .. ....++++|+
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~p~gia~d~~g~- 103 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE-ILQSSGKNLFYLPHGLSIDTDGN- 103 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC-EEEEECTTTCSSEEEEEECTTSC-
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe-EEeccCCCccCCceEEEECCCCC-
Confidence 346789999987654433311 1369999998886 4332221 1 11 1234888888
Q ss_pred EEEEEcCCCCCCceEEEeeCCCCCCceEEEc--------CCCCceeeEEEEeC-CEEEEEEecCCeeEEEEEEc
Q 010654 90 FFITRRSDELFNSELLACPVDNTSETTVLIP--------HRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 90 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~-d~l~~~~~~~~~~~l~~~~~ 154 (505)
+|+.... ..+|++++.++.......+. ......+.++++++ ++.++++...+..++.+++.
T Consensus 104 l~v~d~~----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 104 YWVTDVA----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp EEEEETT----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred EEEEECC----CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 6665433 24899999865211222332 11122466888887 54444433212345777764
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=93.98 E-value=4.8 Score=39.04 Aligned_cols=152 Identities=11% Similarity=0.079 Sum_probs=76.6
Q ss_pred CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC
Q 010654 42 SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH 121 (505)
Q Consensus 42 Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (505)
||++++.... ...|.+.|+.+++....+.... .....++++++.++..+.+ ..+.++|+.. +.....+..
T Consensus 288 ~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~-~~~~~~~~~ 357 (445)
T 2ovr_B 288 DGIHVVSGSL---DTSIRVWDVETGNCIHTLTGHQ-SLTSGMELKDNILVSGNAD-----STVKIWDIKT-GQCLQTLQG 357 (445)
T ss_dssp CSSEEEEEET---TSCEEEEETTTCCEEEEECCCC-SCEEEEEEETTEEEEEETT-----SCEEEEETTT-CCEEEEECS
T ss_pred CCCEEEEEeC---CCeEEEEECCCCCEEEEEcCCc-ccEEEEEEeCCEEEEEeCC-----CeEEEEECCC-CcEEEEEcc
Confidence 7776654433 3458888888876233333222 3334467788866655533 3788888865 333223332
Q ss_pred --CCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecC-
Q 010654 122 --RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL- 198 (505)
Q Consensus 122 --~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (505)
.....+..+.++++. +++...++ .+.+|++.. +..+..+.. .........+..+.+++++. ++++.+..
T Consensus 358 ~~~~~~~v~~~~~~~~~-l~s~~~dg--~v~iwd~~~-~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~-~la~~~~dg 429 (445)
T 2ovr_B 358 PNKHQSAVTCLQFNKNF-VITSSDDG--TVKLWDLKT-GEFIRNLVT---LESGGSGGVVWRIRASNTKL-VCAVGSRNG 429 (445)
T ss_dssp TTSCSSCEEEEEECSSE-EEEEETTS--EEEEEETTT-CCEEEEEEE---CTTGGGTCEEEEEEECSSEE-EEEEECSSS
T ss_pred CCCCCCCEEEEEECCCE-EEEEeCCC--eEEEEECCC-Cceeeeeec---cccCCCCceEEEEEecCCEE-EEEEcccCC
Confidence 123457788887654 44445554 477888764 332221100 00000011122234555554 33344433
Q ss_pred CCCceEEEEECCC
Q 010654 199 RTPPSVYDYDMDM 211 (505)
Q Consensus 199 ~~p~~~~~~~~~~ 211 (505)
+.+..+++++.+.
T Consensus 430 ~~~~~l~v~df~~ 442 (445)
T 2ovr_B 430 TEETKLLVLDFDV 442 (445)
T ss_dssp SSCCEEEEEECCC
T ss_pred CCccEEEEEECCC
Confidence 3356777777653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=93.98 E-value=2.5 Score=39.03 Aligned_cols=127 Identities=7% Similarity=-0.019 Sum_probs=66.1
Q ss_pred ceEEEEECCC-CCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCC------Cceeeeecccc--
Q 010654 8 DKAWLHKLEA-DQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKP------EELRVLTPRVV-- 77 (505)
Q Consensus 8 ~~l~~~~lgt-~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~------~~~~~l~~~~~-- 77 (505)
..|.+|++.+ ..... .............+.|+| ||++++.... ...+.+.+++.. .....+.....
T Consensus 170 ~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~---dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSI---DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp TEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEET---TSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred CeEEEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEec---CCcEEEEEEcCCCcccccccceeeecccccc
Confidence 4789999977 43222 222222233345778999 9998776544 234555555443 22333332211
Q ss_pred -------ce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCC
Q 010654 78 -------GV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGG 145 (505)
Q Consensus 78 -------~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~ 145 (505)
.. ...|+|+|+.|+..+.+ ..|.++|+.. +.....+...-...+..+. ..+.++++...++
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~-~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSD-----GIISCWNLQT-RKKIKNFAKFNEDSVVKIA-CSDNILCLATSDD 314 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETT-----SCEEEEETTT-TEEEEECCCCSSSEEEEEE-ECSSEEEEEEECT
T ss_pred cccccceeEEEEEEcCCCCEEEEecCC-----ceEEEEcCcc-HhHhhhhhcccCCCceEec-CCCCeEEEEecCC
Confidence 22 23499999987765533 3788889875 3322233322033455555 3333444444444
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=93.97 E-value=3.3 Score=37.06 Aligned_cols=112 Identities=6% Similarity=0.019 Sum_probs=68.9
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
-.+.+++|++.+|++.........|+++++++.. .+.+...... ....++++++.||+.... ..+|+++++++
T Consensus 124 P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~----~~~I~~~~~~g 198 (267)
T 1npe_A 124 PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAG----THRAECLNPAQ 198 (267)
T ss_dssp EEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETT----TTEEEEEETTE
T ss_pred ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECC----CCEEEEEecCC
Confidence 3467899988888776544335689999987654 4444322111 123488999999888754 24899999875
Q ss_pred CCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 112 TSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.....++. ... ...+++.+++.++++...++ ++..++..
T Consensus 199 -~~~~~~~~-~~~-~P~gi~~d~~~lyva~~~~~--~v~~~d~~ 237 (267)
T 1npe_A 199 -PGRRKVLE-GLQ-YPFAVTSYGKNLYYTDWKTN--SVIAMDLA 237 (267)
T ss_dssp -EEEEEEEE-CCC-SEEEEEEETTEEEEEETTTT--EEEEEETT
T ss_pred -CceEEEec-CCC-CceEEEEeCCEEEEEECCCC--eEEEEeCC
Confidence 22222333 222 24567777777777654443 46677754
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=93.76 E-value=1.8 Score=41.99 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=65.1
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
..++|+|||+ |++... ....|+++|++++. +..+..........|+++|+.||+..... ..+|++++..+...
T Consensus 134 ~~la~d~~g~-lyv~d~--~~~~I~~id~~~g~-~~~~~~~~~~~~ia~~~~g~~l~~~d~~~---~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 134 WGIAAVGNNT-VLAYQR--DDPRVRLISVDDNK-VTTVHPGFKGGKPAVTKDKQRVYSIGWEG---THTVYVYMKASGWA 206 (409)
T ss_dssp EEEEECSTTE-EEEEET--TTTEEEEEETTTTE-EEEEEETCCBCBCEECTTSSEEEEEBSST---TCEEEEEEGGGTTC
T ss_pred eEEEEeCCCC-EEEEec--CCCcEEEEECCCCE-EEEeeccCCCCceeEecCCCcEEEEecCC---CceEEEEEcCCCce
Confidence 4678999998 444432 34679999999886 55554332222255999999888776532 12899999765222
Q ss_pred ceEEE---cCCCCceeeEEEEeC-C-EEEEEEecCCeeEEEEEEcC
Q 010654 115 TTVLI---PHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 115 ~~~~~---~~~~~~~i~~~~~~~-d-~l~~~~~~~~~~~l~~~~~~ 155 (505)
.. .+ .......+.++.+++ + .+++ ...+ .+++.++..
T Consensus 207 ~~-~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~--~~I~~~d~~ 248 (409)
T 3hrp_A 207 PT-RIGQLGSTFSGKIGAVALDETEEWLYF-VDSN--KNFGRFNVK 248 (409)
T ss_dssp EE-EEEECCTTSCSCCCBCEECTTSSEEEE-ECTT--CEEEEEETT
T ss_pred eE-EeeeccchhcCCcEEEEEeCCCCeEEE-EECC--CcEEEEECC
Confidence 12 23 111122345667776 4 5555 3333 467778765
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=93.68 E-value=5.3 Score=38.49 Aligned_cols=111 Identities=11% Similarity=0.059 Sum_probs=66.5
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
.++++.+.++.|++.-.. ...|+++++++.. .+.+.... .. ....+.|.++.||+.... ...+|+++++++
T Consensus 162 ~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~---~~~~I~~~~~dG- 234 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV--LGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNG- 234 (400)
T ss_dssp EEEEEETTTTEEEEEETT--TTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECS---SSCCEEEEETTS-
T ss_pred ccEEEEecCCceEEEECC--CCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCC---CCCEEEEEeCCC-
Confidence 355666766677665432 4578899998765 44444322 11 123477888888887532 235899999986
Q ss_pred CCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 010654 113 SETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.....++..... ...++.++. +.||++-.. ..++..++++
T Consensus 235 ~~~~~~~~~~l~-~P~glavd~~~~~lY~aD~~--~~~I~~~d~d 276 (400)
T 3p5b_L 235 VDIYSLVTENIQ-WPNGITLDLLSGRLYWVDSK--LHSISSIDVN 276 (400)
T ss_dssp CSCEEEECSSCS-CEEEEEEETTTTEEEEEETT--TTEEEEEETT
T ss_pred CccEEEEECCCC-ceEEEEEEeCCCEEEEEECC--CCEEEEEeCC
Confidence 333324443333 456788884 466665433 3467778775
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=93.64 E-value=5.4 Score=38.45 Aligned_cols=181 Identities=14% Similarity=0.133 Sum_probs=96.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeec-ccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTP-RVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~-~~~~~~-~~ 82 (505)
..|.+.++.+. +.+.+.. ......+++|++++..|+++-.. ...|+++++++.. ....+.. ...... ..
T Consensus 92 ~~I~~i~l~~~--~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 92 HEVRKMTLDRS--EYTSLIP--NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp TEEEEECTTSC--SCEEEEC--SCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred ceeEEEccCCc--ceeEecc--ccCcceEEeeeeccCceEEEecC--CCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 45666676543 2333332 23345678899988888876433 3568889887621 1233332 211111 23
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
+.+.++.||+.... ..+|.++++++ .....++..... ...++..++ +.||++-. ....++..++++ |..
T Consensus 166 vD~~~~~lY~~d~~----~~~I~~~~~~g-~~~~~l~~~~~~-~P~~iavdp~~g~ly~td~-~~~~~I~~~~~d--G~~ 236 (400)
T 3p5b_L 166 VDWIHSNIYWTDSV----LGTVSVADTKG-VKRKTLFRENGS-KPRAIVVDPVHGFMYWTDW-GTPAKIKKGGLN--GVD 236 (400)
T ss_dssp EETTTTEEEEEETT----TTEEEEECTTT-CSEEEEEECSSC-CEEEEEEETTTTEEEEEEC-SSSCCEEEEETT--SCS
T ss_pred EEecCCceEEEECC----CCeEEEEeCCC-CceEEEEeCCCC-CcceEEEecccCeEEEEeC-CCCCEEEEEeCC--CCc
Confidence 55567888887643 24899999886 333334544433 356777775 45555533 223467777765 432
Q ss_pred ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 161 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.+.. ..+.. + .++.++++++.+++.-+ ....|+.+++.+..
T Consensus 237 ~~~~~~-~~l~~--P----~glavd~~~~~lY~aD~---~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 237 IYSLVT-ENIQW--P----NGITLDLLSGRLYWVDS---KLHSISSIDVNGGN 279 (400)
T ss_dssp CEEEEC-SSCSC--E----EEEEEETTTTEEEEEET---TTTEEEEEETTSCC
T ss_pred cEEEEE-CCCCc--e----EEEEEEeCCCEEEEEEC---CCCEEEEEeCCCCc
Confidence 222211 01111 1 12345666777766633 23578888886544
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.63 E-value=5.8 Score=42.06 Aligned_cols=110 Identities=11% Similarity=0.057 Sum_probs=67.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
++++.+.++.|++.-.. ...|+++++++.. .+.|.... .. ....+.|.++.||+.... ...+|.++++++ .
T Consensus 475 GLAvD~~~~~LY~tD~~--~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g---~~~~I~~~~~dG-~ 547 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSV--LGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNG-V 547 (791)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECS---SSCEEEEEETTS-C
T ss_pred eeeeeecCCcEEEEecC--CCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCC---CCCeEEEEecCC-C
Confidence 56677778887776432 4579999998765 55544322 11 123477888888887532 225899999986 3
Q ss_pred CceEEEcCCCCceeeEEEEe--CCEEEEEEecCCeeEEEEEEcC
Q 010654 114 ETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~--~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
....++..... ...++..+ .+.||++-.. ..++..++++
T Consensus 548 ~~~~lv~~~l~-~P~GLavD~~~~~LYwaD~~--~~~I~~~d~d 588 (791)
T 3m0c_C 548 DIYSLVTENIQ-WPNGITLDLLSGRLYWVDSK--LHSISSIDVN 588 (791)
T ss_dssp CEEEEECSSCS-CEEEEEEETTTTEEEEEETT--TTEEEEEETT
T ss_pred ceEEEEeCCCC-CceEEEEecCCCeEEEEeCC--CCcEEEEecC
Confidence 33324443333 35677777 3566666433 3467777765
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=93.51 E-value=1.1 Score=40.70 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
.+++..+++.+.++. ...++.++|||+||.++..++...
T Consensus 119 ~~~~~~~l~~~~~~~--p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 119 QNELVATVLDQFKQY--PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHC--CCceEEEEeeCHHHHHHHHHHHHH
Confidence 345555555555431 125799999999999988777554
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=93.50 E-value=6 Score=38.52 Aligned_cols=148 Identities=13% Similarity=0.082 Sum_probs=83.3
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCce
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETT 116 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 116 (505)
.++++|++++..... ..|.+.|+.+++....+........ ..|+|+|+.++..+.+ ..|.++|+.+ +...
T Consensus 275 ~~~~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~-~~~~ 345 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYD---NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLEN-GELM 345 (464)
T ss_dssp EEEEETTEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTT-TEEE
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCC-CcEE
Confidence 457888887765433 3588889988752333333332322 3499999987766543 3688889876 4333
Q ss_pred EEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEe
Q 010654 117 VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYS 196 (505)
Q Consensus 117 ~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (505)
..+.... ..+..+.++++. +++...++ .+.+|++.. +.. ........ ......+++++.. +++.+
T Consensus 346 ~~~~~h~-~~v~~~~~~~~~-l~s~s~dg--~v~vwd~~~-~~~--------~~~~~~~~-~~~~~~~~~~~~~-l~~~~ 410 (464)
T 3v7d_B 346 YTLQGHT-ALVGLLRLSDKF-LVSAAADG--SIRGWDAND-YSR--------KFSYHHTN-LSAITTFYVSDNI-LVSGS 410 (464)
T ss_dssp EEECCCS-SCEEEEEECSSE-EEEEETTS--EEEEEETTT-CCE--------EEEEECTT-CCCEEEEEECSSE-EEEEE
T ss_pred EEEeCCC-CcEEEEEEcCCE-EEEEeCCC--cEEEEECCC-Cce--------eeeecCCC-CccEEEEEeCCCE-EEEec
Confidence 2444333 347788887654 44445554 477888764 221 11111100 0111234566664 34443
Q ss_pred cCCCCceEEEEECCCCc
Q 010654 197 SLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 197 ~~~~p~~~~~~~~~~~~ 213 (505)
-..+.+.++.+++
T Consensus 411 ----dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 411 ----ENQFNIYNLRSGK 423 (464)
T ss_dssp ----TTEEEEEETTTCC
T ss_pred ----CCeEEEEECCCCc
Confidence 2578888988876
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=93.48 E-value=0.023 Score=53.34 Aligned_cols=61 Identities=11% Similarity=0.064 Sum_probs=40.5
Q ss_pred CCceeeEEEEEeCCccCCCCC-CcEEEEEcCCCCcCCC--CCCc--hhHHHHHH-CCcEEEEEcccCC
Q 010654 242 DGTQIPICIVYRKNLVKLDGS-DPLLLYGYGSYEICND--PAFN--SSRLSLLD-RGFIFAIAQIRGG 303 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~-~P~iv~~hGg~~~~~~--~~~~--~~~~~l~~-~G~~v~~~d~rG~ 303 (505)
.+....++++.|++. ..+.+ .|+||.+||..++... ..|. .....|++ .||+|+.|+-.+.
T Consensus 200 ~~~~~~~~~yvP~~~-~~~~~~~~l~v~lHGc~~~~~~~g~~~~~~~~~~~~Ad~~~~iv~yP~~~~~ 266 (318)
T 2d81_A 200 NGMDTTGYLYVPQSC-ASGATVCSLHVALHGCLQSYSSIGSRFIQNTGYNKWADTNNMIILYPQAIPD 266 (318)
T ss_dssp TTBCSEEEEEECHHH-HSSSSCEEEEEEECCTTCSHHHHTTHHHHHSCHHHHHTTTTEEEEECCBCCE
T ss_pred CCCCcceEEEecCCC-CCCCCCCCEEEEecCCCCCcchhhhhhhcccChHHHHHhCCeEEEeCCCcCC
Confidence 344566778999886 44444 7999999998765420 1121 12356777 5999999997654
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.43 E-value=0.27 Score=46.82 Aligned_cols=136 Identities=8% Similarity=0.069 Sum_probs=70.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeecccccee-EEe
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGVD-TAA 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~~-~~~ 83 (505)
..|.+|++.++..+....+.. .......++|+|||++|+..... ..|.+.|+.++. ....+........ ..|
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEETT---SSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred CEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 456677775531011122222 22234578899999987755432 347777777653 1222333332322 349
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCC---ceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSE---TTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
+|||+.|+..+.+ ..+.++++..... .. .+.......+..+.|+++. ++++...++ .+.+|++.
T Consensus 109 ~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~ 176 (377)
T 3dwl_C 109 SPNEDKFAVGSGA-----RVISVCYFEQENDWWVSK-HLKRPLRSTILSLDWHPNNVLLAAGCADR--KAYVLSAY 176 (377)
T ss_dssp CTTSSCCEEEESS-----SCEEECCC-----CCCCE-EECSSCCSCEEEEEECTTSSEEEEEESSS--CEEEEEEC
T ss_pred CCCCCEEEEEecC-----CeEEEEEECCcccceeee-EeecccCCCeEEEEEcCCCCEEEEEeCCC--EEEEEEEE
Confidence 9999988876653 3677778765221 22 4443223457889998874 555555554 36678775
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=93.41 E-value=4.4 Score=36.71 Aligned_cols=175 Identities=11% Similarity=0.086 Sum_probs=87.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCc--eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cce-eEE
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDI--YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGV-DTA 82 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~--~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~-~~~ 82 (505)
..+|+++|..|++ .+++-+.+. -.-++..+|||+.++ + ....++.+|. +|+.+..+.... ... ...
T Consensus 14 ~~~v~~~d~~tG~----~~w~~~~~~~~~~~~~~~~pdG~ilv-s----~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 14 WNKIAIINKDTKE----IVWEYPLEKGWECNSVAATKAGEILF-S----YSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp CSEEEEEETTTTE----EEEEEECCTTCCCCEEEECTTSCEEE-E----CBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred CCEEEEEECCCCe----EEEEeCCCccCCCcCeEECCCCCEEE-e----CCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 4568888876652 344432221 123567899998665 2 2346999999 555244443221 111 223
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC-----ceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-----VKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+.+||+.++-.+.. +.+++.++.+ |+..|.+..... .....+....+ .++++...++ ++..++.+
T Consensus 84 ~~~dG~~lv~~~~~----~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~--~v~~~d~~- 154 (276)
T 3no2_A 84 ILPDGNALVAWCGH----PSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS--EVREIAPN- 154 (276)
T ss_dssp ECTTSCEEEEEEST----TEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT--EEEEECTT-
T ss_pred ECCCCCEEEEecCC----CCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC--EEEEECCC-
Confidence 78899876655431 2488888865 344443321111 11223334444 3444444443 46667654
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
|+.+- ....+...+.. ...++++.+ +.... ...++.+++.+|+.
T Consensus 155 -G~~~w------~~~~~~~~~~~---~~~~~g~~~-v~~~~---~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 155 -GQLLN------SVKLSGTPFSS---AFLDNGDCL-VACGD---AHCFVQLNLESNRI 198 (276)
T ss_dssp -SCEEE------EEECSSCCCEE---EECTTSCEE-EECBT---TSEEEEECTTTCCE
T ss_pred -CCEEE------EEECCCCccce---eEcCCCCEE-EEeCC---CCeEEEEeCcCCcE
Confidence 44221 11111111111 123455543 33332 24689999887874
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=93.11 E-value=6.9 Score=38.17 Aligned_cols=103 Identities=8% Similarity=0.060 Sum_probs=58.0
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecC-C------ce--EEEEEEeCCCcEEEEEeccc----cceEEEEEeCCCCCceee
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKD-D------IY--SLGLQASESKKFLFIASESK----ITRFVFYLDVSKPEELRV 71 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~-~------~~--~~~~~~SpDg~~i~~~~~~~----~~~~l~~~d~~~~~~~~~ 71 (505)
++..+|++.|+.+.+.+. .+.+... . .+ --...-+||| |+++.... ....+.++|.++.+....
T Consensus 103 l~s~~I~viD~~t~p~~p-~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~ 179 (462)
T 2ece_A 103 LRSSRIYIIDTKPNPREP-KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGK 179 (462)
T ss_dssp TTTCCEEEEECCSCTTSC-EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEE
T ss_pred CCCCeEEEEECCCCCCCc-eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEE
Confidence 456788999987765433 3333221 0 11 1134678999 55543221 357899999998862233
Q ss_pred eecc--cccee--EEeeeeCCEEEEEEcCC-------C--------CCCceEEEeeCCC
Q 010654 72 LTPR--VVGVD--TAASHRGNHFFITRRSD-------E--------LFNSELLACPVDN 111 (505)
Q Consensus 72 l~~~--~~~~~--~~~s~dg~~l~~~~~~~-------~--------~~~~~l~~~~~~~ 111 (505)
+... ..+.. +.|+|+++. ++.++-. + ....+|.++|+++
T Consensus 180 ~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 180 WEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp CCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred EccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 3212 12222 347999994 4444310 0 1236999999986
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=93.11 E-value=5 Score=36.49 Aligned_cols=136 Identities=11% Similarity=0.098 Sum_probs=72.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.++.......+.. .......++|+|| |++|+.... ...+.++|+.++. ....+........ ..
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s~---d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~ 152 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 152 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEET---TSEEEEEEBCSSSCBCCEEEECCSSCEEEEE
T ss_pred CEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEEC---CCcEEEEEecCCCceeeeeeecccCccceEe
Confidence 457889987653223333332 2233457889998 777664433 3457777776653 1222322222222 34
Q ss_pred eeeeC-------------CEEEEEEcCCCCCCceEEEeeCCCCCCceE----EEcCCCCceeeEEEEeCC----EEEEEE
Q 010654 83 ASHRG-------------NHFFITRRSDELFNSELLACPVDNTSETTV----LIPHRESVKLQDIQLFID----HLAVYE 141 (505)
Q Consensus 83 ~s~dg-------------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d----~l~~~~ 141 (505)
|+|++ +.|+--+ .+ ..+.+.|+.. +...+ .+..... .+..+.|+++ .+++..
T Consensus 153 ~~p~~~~~~~~~~~~~~~~~l~sgs-~D----~~v~lwd~~~-~~~~~~~~~~l~~H~~-~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 153 WAPATIEEDGEHNGTKESRKFVTGG-AD----NLVKIWKYNS-DAQTYVLESTLEGHSD-WVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp ECCCC------------CCEEEEEE-TT----SCEEEEEEET-TTTEEEEEEEECCCSS-CEEEEEECCCCSSSEEEEEE
T ss_pred ecCCcccccccCCCCCCcceEEEEc-CC----CcEEEEEEcC-CCceEEEEEEecCCCC-ceEEEEECCCCCCceEEEEE
Confidence 88863 3444333 22 2455566544 22222 2333333 4788999886 566666
Q ss_pred ecCCeeEEEEEEcCC
Q 010654 142 REGGLQKITTYRLPA 156 (505)
Q Consensus 142 ~~~~~~~l~~~~~~~ 156 (505)
..++. +.+|++..
T Consensus 226 s~D~~--v~iWd~~~ 238 (297)
T 2pm7_B 226 SQDRT--CIIWTQDN 238 (297)
T ss_dssp ETTSC--EEEEEESS
T ss_pred ECCCc--EEEEEeCC
Confidence 66664 56677653
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=93.09 E-value=0.27 Score=48.15 Aligned_cols=137 Identities=14% Similarity=0.141 Sum_probs=76.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
..|.+||+.+. ....+..... ......++|+|||++|+.... ...|+++|+++.. +..+..+...+. ..|+|
T Consensus 187 ~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p 260 (435)
T 4e54_B 187 GTTRLQDFKGN--ILRVFASSDTINIWFCSLDVSASSRMVVTGDN---VGNVILLNMDGKE-LWNLRMHKKKVTHVALNP 260 (435)
T ss_dssp SCEEEEETTSC--EEEEEECCSSCSCCCCCEEEETTTTEEEEECS---SSBEEEEESSSCB-CCCSBCCSSCEEEEEECT
T ss_pred CEEEEeeccCC--ceeEEeccCCCCccEEEEEECCCCCEEEEEeC---CCcEeeeccCcce-eEEEecccceEEeeeecC
Confidence 35778898653 1222222211 223346789999998765433 3458888887654 555544433332 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCC-ceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSE-TTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
+++.+++....++ .+.++|+..... ........-...+..+.|++++ .+++...++ .+.+|++..
T Consensus 261 ~~~~~~~s~s~d~----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~--~i~iwd~~~ 327 (435)
T 4e54_B 261 CCDWFLATASVDQ----TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS--EIRVYSASQ 327 (435)
T ss_dssp TCSSEEEEEETTS----BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS--CEEEEESSS
T ss_pred CCceEEEEecCcc----eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC--EEEEEECCC
Confidence 9987776655432 455667654221 1111111112346778888763 444555554 467888764
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.07 E-value=3.2 Score=43.25 Aligned_cols=133 Identities=9% Similarity=0.032 Sum_probs=71.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
..|.+|++.+. +....+.. .......++|||||++|+.... ...|.+.|+.+++.+..+.....-....|+|++
T Consensus 541 ~~v~vwd~~~~--~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~---Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 541 KTVKVWNLSNC--KLRSTLAG-HTGYVSTVAVSPDGSLCASGGK---DGVVLLWDLAEGKKLYSLEANSVIHALCFSPNR 614 (694)
T ss_dssp SCEEEEETTTC--CEEEEECC-CSSCEEEEEECTTSSEEEEEET---TSBCEEEETTTTEEEECCBCSSCEEEEEECSSS
T ss_pred CeEEEEECCCC--cEEEEEcC-CCCCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCceEEEecCCCcEEEEEEcCCC
Confidence 45788888764 23333332 2334557899999998765433 345778888877522222221111223499998
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC------------------CCceeeEEEEeCCE-EEEEEecCCeeE
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHR------------------ESVKLQDIQLFIDH-LAVYEREGGLQK 148 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------------~~~~i~~~~~~~d~-l~~~~~~~~~~~ 148 (505)
..+...++. .+.+.|+.+ +...-.+... .-..+..+.|++|+ .+++...++.
T Consensus 615 ~~l~~~~~~------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~-- 685 (694)
T 3dm0_A 615 YWLCAATEH------GIKIWDLES-KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV-- 685 (694)
T ss_dssp SEEEEEETT------EEEEEETTT-TEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE--
T ss_pred cEEEEEcCC------CEEEEECCC-CCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe--
Confidence 776654421 466677654 2110011100 01124678888874 4555556654
Q ss_pred EEEEEcC
Q 010654 149 ITTYRLP 155 (505)
Q Consensus 149 l~~~~~~ 155 (505)
+.+|++.
T Consensus 686 i~iW~i~ 692 (694)
T 3dm0_A 686 IRVWGIG 692 (694)
T ss_dssp EEEEEC-
T ss_pred EEEEecc
Confidence 5667653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.00 E-value=11 Score=40.85 Aligned_cols=131 Identities=10% Similarity=0.079 Sum_probs=74.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
..|.+|+..+. ..++......-...++|+| |++|+... ....|.+.|+.+++....+... ..+ ...|+|+
T Consensus 39 g~I~lw~~~~~----~~~~~~~~~~~V~~l~fsp-g~~L~S~s---~D~~v~lWd~~~~~~~~~~~~~-~~V~~v~~sp~ 109 (902)
T 2oaj_A 39 GEVHIYGQQQV----EVVIKLEDRSAIKEMRFVK-GIYLVVIN---AKDTVYVLSLYSQKVLTTVFVP-GKITSIDTDAS 109 (902)
T ss_dssp SEEEEECSTTC----EEEEECSSCCCEEEEEEET-TTEEEEEE---TTCEEEEEETTTCSEEEEEECS-SCEEEEECCTT
T ss_pred CEEEEEeCCCc----EEEEEcCCCCCEEEEEEcC-CCEEEEEE---CcCeEEEEECCCCcEEEEEcCC-CCEEEEEECCC
Confidence 46788887542 2233222233345788999 88554332 2356888899887623334322 222 2349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCc-eEEE--------c-CCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSET-TVLI--------P-HRESVKLQDIQLFID--HLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~--------~-~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~ 154 (505)
|++|+.-+.+ ..+.++|+.+ +.. ...+ . ......+..+.|.++ .++++...++ .+ +|++
T Consensus 110 g~~l~sgs~d-----g~V~lwd~~~-~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg--~v-lWd~ 180 (902)
T 2oaj_A 110 LDWMLIGLQN-----GSMIVYDIDR-DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV--TL-TYSL 180 (902)
T ss_dssp CSEEEEEETT-----SCEEEEETTT-TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC--EE-EEET
T ss_pred CCEEEEEcCC-----CcEEEEECCC-CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC--cE-EEEC
Confidence 9988776643 3677788865 221 1111 0 111234678999985 4555555554 46 8888
Q ss_pred CC
Q 010654 155 PA 156 (505)
Q Consensus 155 ~~ 156 (505)
..
T Consensus 181 ~~ 182 (902)
T 2oaj_A 181 VE 182 (902)
T ss_dssp TT
T ss_pred CC
Confidence 64
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=92.65 E-value=0.92 Score=44.47 Aligned_cols=114 Identities=13% Similarity=0.204 Sum_probs=64.0
Q ss_pred eEEEEEEeCC-CcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 33 YSLGLQASES-KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 33 ~~~~~~~SpD-g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
....++|+|+ ++.|+.... ...|.++|+.++............. ...|+|||+.|+.-+.+ ..+.++|..
T Consensus 151 ~V~~v~~~p~~~~~las~s~---Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~ 222 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLA---DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPT 222 (434)
T ss_dssp SEEEEEECSSCTTEEEEEET---TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT-----SCEEEECTT
T ss_pred ceEEEEECCCCCCEEEEEEC---CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC-----CcEEEEccC
Confidence 3457899998 565544333 3357788887764111112222222 23599999988876643 367778876
Q ss_pred CCCCceEEEcCCC------CceeeEEEEeCCEEEEEE--ecCC----eeEEEEEEcCC
Q 010654 111 NTSETTVLIPHRE------SVKLQDIQLFIDHLAVYE--REGG----LQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~~~~~~~~------~~~i~~~~~~~d~l~~~~--~~~~----~~~l~~~~~~~ 156 (505)
+ .... .+.... ...+..+.|.++..+++. ..+| ...+.+|++..
T Consensus 223 ~-~~~~-~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 223 L-QEKK-VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp C-CEEE-EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred C-cccc-cccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 3 2121 222111 125778999988655533 2322 23477788764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=92.44 E-value=0.56 Score=44.91 Aligned_cols=73 Identities=14% Similarity=-0.039 Sum_probs=46.8
Q ss_pred EEEEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeee-cc-------ccceeEEeeeeCCEEEEEEcCCCCC
Q 010654 36 GLQASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLT-PR-------VVGVDTAASHRGNHFFITRRSDELF 100 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~-~~-------~~~~~~~~s~dg~~l~~~~~~~~~~ 100 (505)
.+..||||+++++.... ...+.|.++|+.+++....+. +. ..-....+||||+++|+....+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~--- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS--- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS---
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC---
Confidence 67899999998877532 235779999999987333332 20 1111245999999998886431
Q ss_pred CceEEE--eeCCC
Q 010654 101 NSELLA--CPVDN 111 (505)
Q Consensus 101 ~~~l~~--~~~~~ 111 (505)
...+.+ +|..+
T Consensus 146 ~~~v~V~~iD~~t 158 (368)
T 1mda_H 146 SAAAGLSVPGASD 158 (368)
T ss_dssp SCEEEEEETTTEE
T ss_pred CCeEEEEEEchhh
Confidence 235555 66643
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.42 E-value=1.3 Score=39.85 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=68.5
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
.+.|++++||..++.+ .+|+.+|+.+ .....++-......+++++.+++.++++.+. ..++++++++..+. +
T Consensus 33 a~~~~~~~L~aV~d~~----~~I~~ld~~g--~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~-~~~l~~~~v~~~~~-i 104 (255)
T 3qqz_A 33 TWSAQSNTLFSTINKP----AAIVEMTTNG--DLIRTIPLDFVKDLETIEYIGDNQFVISDER-DYAIYVISLTPNSE-V 104 (255)
T ss_dssp EEETTTTEEEEEEETT----EEEEEEETTC--CEEEEEECSSCSSEEEEEECSTTEEEEEETT-TTEEEEEEECTTCC-E
T ss_pred EEeCCCCEEEEEECCC----CeEEEEeCCC--CEEEEEecCCCCChHHeEEeCCCEEEEEECC-CCcEEEEEcCCCCe-e
Confidence 3788899999988762 5899999874 3222343333345889999887655555433 36688888875442 1
Q ss_pred cccCCCceeeccC----CeeeecCCCCcccCCEEEEEEecCCCCceEEEEE
Q 010654 162 KSLQGGKSVEFID----PVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYD 208 (505)
Q Consensus 162 ~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 208 (505)
..+ ....++- ....+.++.++++++++++..... |..+|.++
T Consensus 105 ~~~---~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~~ 150 (255)
T 3qqz_A 105 KIL---KKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKVN 150 (255)
T ss_dssp EEE---EEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEEE
T ss_pred eee---eeeccccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEEc
Confidence 111 1111110 111123455667777787766554 55888887
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.39 E-value=6.1 Score=35.67 Aligned_cols=129 Identities=12% Similarity=0.064 Sum_probs=70.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeec-ccccee-EEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~-~~~s 84 (505)
..|.+|+. .+....+.. .........|+| +++.++..... ..+.+.|.... ...+.. ...... ..|+
T Consensus 124 ~~i~~~d~----~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~--~~~~~~~~~~~i~~~~~~ 193 (313)
T 3odt_A 124 KTAKVWKE----GSLVYNLQA-HNASVWDAKVVSFSENKFLTASAD---KTIKLWQNDKV--IKTFSGIHNDVVRHLAVV 193 (313)
T ss_dssp SEEEEEET----TEEEEEEEC-CSSCEEEEEEEETTTTEEEEEETT---SCEEEEETTEE--EEEECSSCSSCEEEEEEE
T ss_pred CCEEEEcC----CcEEEeccc-CCCceeEEEEccCCCCEEEEEECC---CCEEEEecCce--EEEEeccCcccEEEEEEc
Confidence 45677772 122333332 222344567777 88887655432 34666773321 333332 222222 3489
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
|++. ++..+.. ..+.++|+.. +.....+.... ..+..+.+++++.+++...++ .+.+|++..
T Consensus 194 ~~~~-~~~~~~d-----g~i~i~d~~~-~~~~~~~~~~~-~~i~~~~~~~~~~l~~~~~dg--~v~iwd~~~ 255 (313)
T 3odt_A 194 DDGH-FISCSND-----GLIKLVDMHT-GDVLRTYEGHE-SFVYCIKLLPNGDIVSCGEDR--TVRIWSKEN 255 (313)
T ss_dssp ETTE-EEEEETT-----SEEEEEETTT-CCEEEEEECCS-SCEEEEEECTTSCEEEEETTS--EEEEECTTT
T ss_pred CCCe-EEEccCC-----CeEEEEECCc-hhhhhhhhcCC-ceEEEEEEecCCCEEEEecCC--EEEEEECCC
Confidence 9987 4433322 3788899876 33332444333 357889999886556666655 477888764
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=92.27 E-value=0.58 Score=45.71 Aligned_cols=116 Identities=10% Similarity=0.017 Sum_probs=66.8
Q ss_pred eCCCcEEEEEeccccc--eEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC-----CCCCceEEEeeCCCC
Q 010654 40 SESKKFLFIASESKIT--RFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD-----ELFNSELLACPVDNT 112 (505)
Q Consensus 40 SpDg~~i~~~~~~~~~--~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~~~l~~~~~~~~ 112 (505)
.+|++++++....... +.|.++|+++.+....+.-.... ...+||||+++|+..... +.....|.++|..+.
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 3789887776543322 79999999998733333322222 355999999999886410 111247899998763
Q ss_pred CCceE-EEc-CCC---CceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 113 SETTV-LIP-HRE---SVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 113 ~~~~~-~~~-~~~---~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
..... .++ ... ......+.+++|+ .+|+.+......+.++|+.+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 32222 233 110 1123456667663 34444443345688888764
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=92.27 E-value=4.6 Score=36.57 Aligned_cols=143 Identities=13% Similarity=0.039 Sum_probs=71.0
Q ss_pred cceEEEEEeCCCCCceeeeeccc--cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE
Q 010654 54 ITRFVFYLDVSKPEELRVLTPRV--VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ 131 (505)
Q Consensus 54 ~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 131 (505)
....|+++|.++|+....+.... ......++|+|+.|+ +.. ..++.+|. + ++..|.+.......+....
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~-----~~V~~~d~-~-G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYS-----KGAKMITR-D-GRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECB-----SEEEEECT-T-SCEEEEEECCTTCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCC-----CCEEEECC-C-CCEEEEEcCCCCccccccE
Confidence 35678899998886233333221 122345889997554 321 36889998 4 5677866643333456666
Q ss_pred EeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 132 LFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 132 ~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
...|+-+++.......++..++. +|+.+....-...+ +............++++. +++.. ....++.++.+
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~--~Gk~l~~~~~~~~~--~~~~~~~~~v~~~~~G~~-lv~~~---~~~~v~~~d~~- 154 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM--KGEVLSKTEFETGI--ERPHAQFRQINKNKKGNY-LVPLF---ATSEVREIAPN- 154 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT--TSCEEEEEEECCSC--SSGGGSCSCCEECTTSCE-EEEET---TTTEEEEECTT-
T ss_pred ECCCCCEEEEecCCCCEEEEEeC--CCCEEEEEeccCCC--CcccccccCceECCCCCE-EEEec---CCCEEEEECCC-
Confidence 66664333333221234555543 35432111000000 000000112233456664 44433 34578899987
Q ss_pred CcE
Q 010654 212 GIS 214 (505)
Q Consensus 212 ~~~ 214 (505)
|+.
T Consensus 155 G~~ 157 (276)
T 3no2_A 155 GQL 157 (276)
T ss_dssp SCE
T ss_pred CCE
Confidence 764
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=92.26 E-value=1.9 Score=41.86 Aligned_cols=134 Identities=9% Similarity=-0.012 Sum_probs=71.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee---c-cccc-eeE
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT---P-RVVG-VDT 81 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~~~~-~~~ 81 (505)
..+|+++++.++. ...+... . ..-. +.|+|||+.|++.... ....||+++.+++...+.+. . .... ...
T Consensus 151 ~~~I~~id~~~g~--~~~~~~~-~-~~~~-ia~~~~g~~l~~~d~~-~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~i 224 (409)
T 3hrp_A 151 DPRVRLISVDDNK--VTTVHPG-F-KGGK-PAVTKDKQRVYSIGWE-GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAV 224 (409)
T ss_dssp TTEEEEEETTTTE--EEEEEET-C-CBCB-CEECTTSSEEEEEBSS-TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBC
T ss_pred CCcEEEEECCCCE--EEEeecc-C-CCCc-eeEecCCCcEEEEecC-CCceEEEEEcCCCceeEEeeeccchhcCCcEEE
Confidence 4567777775532 2223222 1 1112 6899999987665432 22389999988764223331 1 1111 123
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEE----cCCCCc-eee-EEEEeC--CEEEEEEecCCeeEEEEEE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI----PHRESV-KLQ-DIQLFI--DHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~-~i~-~~~~~~--d~l~~~~~~~~~~~l~~~~ 153 (505)
.++|+++.||+ .+. ..+|++++.++ +... ++ ...... ... .+.+++ +.++++-..+ .+++.++
T Consensus 225 av~p~~g~lyv-~d~----~~~I~~~d~~~-~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~--~~I~~~~ 295 (409)
T 3hrp_A 225 ALDETEEWLYF-VDS----NKNFGRFNVKT-QEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL--SSVYKIT 295 (409)
T ss_dssp EECTTSSEEEE-ECT----TCEEEEEETTT-CCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT--TEEEEEC
T ss_pred EEeCCCCeEEE-EEC----CCcEEEEECCC-CCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCC--CEEEEEe
Confidence 48887788888 432 24899999876 3333 33 111111 112 778887 3555554333 3566666
Q ss_pred cC
Q 010654 154 LP 155 (505)
Q Consensus 154 ~~ 155 (505)
.+
T Consensus 296 ~~ 297 (409)
T 3hrp_A 296 PD 297 (409)
T ss_dssp TT
T ss_pred cC
Confidence 54
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=92.13 E-value=5.1 Score=38.04 Aligned_cols=136 Identities=10% Similarity=0.086 Sum_probs=73.0
Q ss_pred ceEEEEECCCCCCCCeEEEEe----cCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCC-Cceeeeecccccee-
Q 010654 8 DKAWLHKLEADQSNDICLYHE----KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKP-EELRVLTPRVVGVD- 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~----~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~- 80 (505)
..|.+||+.+++ ...++.. ..........|++ |+..++.... ...|.+.|+... ...+.+..+...+.
T Consensus 180 ~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~---D~~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 180 QTCVLWDVTTGQ--RISIFGSEFPSGHTADVLSLSINSLNANMFISGSC---DTTVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp SCEEEECTTTCC--EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET---TSCEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred CcEEEEEcCCCc--EEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC---CCeEEEEECCCCCcceEEECCcCCCeEE
Confidence 458889997753 3334421 1122344667766 7766543322 234777787643 22344443332322
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC------ceeeEEEEeCCE-EEEEEecCCeeEEEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES------VKLQDIQLFIDH-LAVYEREGGLQKITTYR 153 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~ 153 (505)
..|+|||+.|+--+.+ ..+.+.|+.. +.....+..... ..+..++|++++ ++++...++ .+.+|+
T Consensus 255 v~~~p~~~~l~s~s~D-----~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--~i~vwd 326 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDD-----GTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--DCYVWD 326 (380)
T ss_dssp EEECTTSSEEEEECSS-----SCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS--CEEEEE
T ss_pred EEEecCCCeEEEEcCC-----CeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC--CEEEEE
Confidence 3499999877644432 3677778765 322212322211 125678888764 455555554 477888
Q ss_pred cCC
Q 010654 154 LPA 156 (505)
Q Consensus 154 ~~~ 156 (505)
+..
T Consensus 327 ~~~ 329 (380)
T 3iz6_a 327 TLL 329 (380)
T ss_dssp TTT
T ss_pred CCC
Confidence 753
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.97 E-value=6.6 Score=35.14 Aligned_cols=193 Identities=11% Similarity=0.064 Sum_probs=92.7
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE---EeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT---AASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..+.+|.||+..|+...+. ...|+.+|++ ++..+.+.-.. ..++ .+.++| .+++.... . .+|+++++.
T Consensus 29 lSGla~~~~~~~L~aV~d~--~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g-~~~vs~E~-~---~~l~~~~v~ 99 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK--PAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDN-QFVISDER-D---YAIYVISLT 99 (255)
T ss_dssp EEEEEEETTTTEEEEEEET--TEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTT-EEEEEETT-T---TEEEEEEEC
T ss_pred cceeEEeCCCCEEEEEECC--CCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCC-EEEEEECC-C---CcEEEEEcC
Confidence 4578899998887766555 6779999998 54244442111 1122 244444 44444432 1 488888876
Q ss_pred CCCCceE--EEc-----CCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 111 NTSETTV--LIP-----HRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 111 ~~~~~~~--~~~-----~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
..+.... ... ......+++++|+++ +++++ .+.....++.++--..+...+-+. ...+.-......+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va-~E~~p~~i~~~~g~~~~~~l~i~~-~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFF-KEKNPIEVYKVNGLLSSNELHISK-DKALQRQFTLDDVSG 177 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEE-EESSSEEEEEEESTTCSSCCEEEE-CHHHHHTCCSSCCCE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEE-ECcCCceEEEEcccccCCceeeec-chhhccccccCCcee
Confidence 5332110 121 122344689999875 56664 444444566665100111111000 000000000111233
Q ss_pred CCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCC---CCCCCceEEEEEEECCCCc
Q 010654 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGG---FDTNNYFTERKWASASDGT 244 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~dG~ 244 (505)
+..++..+.+++... ....|..+|..+ + ++..-.+... +....-++|=+.+.. +|.
T Consensus 178 l~~dp~tg~lliLS~---~s~~L~~~d~~g-~--~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~ 236 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSH---ESRALQEVTLVG-E--VIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGN 236 (255)
T ss_dssp EEEETTTTEEEEEET---TTTEEEEECTTC-C--EEEEEECSTTGGGCSSCCCSEEEEEECT-TCC
T ss_pred EEEcCCCCeEEEEEC---CCCeEEEEcCCC-C--EEEEEEcCCccCCcccccCCCCeeEECC-CCC
Confidence 445566666665543 236788888654 4 2222233222 211222677777754 663
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=91.89 E-value=7.8 Score=35.81 Aligned_cols=111 Identities=5% Similarity=0.050 Sum_probs=69.0
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
-+.+..|++++|++.... ....|+++++++.. .+.+....-. ....++++++.||+.... ..+|+++++++
T Consensus 123 ~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~----~~~I~~~d~dg- 195 (316)
T 1ijq_A 123 RAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNG- 195 (316)
T ss_dssp EEEEEETTTTEEEEEECS-SSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETT----TTEEEEEETTS-
T ss_pred ceEEeCCCCCEEEEEccC-CCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECC----CCeEEEEecCC-
Confidence 466788988888877542 23689999998654 4444322111 123488899999988643 25899999986
Q ss_pred CCceEEEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 113 SETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 113 ~~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
...+.++... ......+++.+.+.+|++-..+ .++..++.
T Consensus 196 ~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~--~~V~~~~~ 236 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANR 236 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEEETTEEEEEETTT--TEEEEEET
T ss_pred CceEEEeecCCccCCcEEEEEECCEEEEEECCC--CeEEEEeC
Confidence 3333233321 1223557778888877766443 35666664
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.77 E-value=3.2 Score=40.16 Aligned_cols=136 Identities=9% Similarity=0.062 Sum_probs=76.4
Q ss_pred ceEEEEECCCCCCCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee-cccccee-EE--
Q 010654 8 DKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVD-TA-- 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~-~~-- 82 (505)
..|.+||+.+. +....+... .......+.|+|||++|+..... ..|.+.|+.++.....+. ....... ..
T Consensus 192 ~~i~iwd~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 192 SRVIIFDIRTL--ERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIRFNVLIRSWSFGDHAPITHVEVC 266 (437)
T ss_dssp SEEEEEETTTC--CEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETTTTEEEEEEBCTTCEEEEEEEEC
T ss_pred CeEEEEeCCCC--eeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcCCccEEEEEecCCCCceEEEEec
Confidence 56899999775 334444432 23345578899999988765443 458888988775223332 2221211 21
Q ss_pred --eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE-EEcCC------------------------CCceeeEEEEeCC
Q 010654 83 --ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHR------------------------ESVKLQDIQLFID 135 (505)
Q Consensus 83 --~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~------------------------~~~~i~~~~~~~d 135 (505)
+++||+.|+ ....+ ..|.+.|+.+ +.... +.... ....+..+.++++
T Consensus 267 ~~~s~~~~~l~-s~~~d----g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~ 340 (437)
T 3gre_A 267 QFYGKNSVIVV-GGSSK----TFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSND 340 (437)
T ss_dssp TTTCTTEEEEE-EESTT----EEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETT
T ss_pred cccCCCccEEE-EEcCC----CcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCc
Confidence 445554444 33222 3677888765 22111 11111 1223566788866
Q ss_pred EEEEEEecCCeeEEEEEEcCC
Q 010654 136 HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 136 ~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.++++...++ .+.+|++..
T Consensus 341 ~~l~s~~~d~--~i~~wd~~~ 359 (437)
T 3gre_A 341 KILLTDEATS--SIVMFSLNE 359 (437)
T ss_dssp EEEEEEGGGT--EEEEEETTC
T ss_pred eEEEecCCCC--eEEEEECCC
Confidence 7777777665 477898863
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.60 E-value=6.5 Score=42.52 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=37.0
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEc-C--CCCceeeEEEEe-----CC----EEEEEEecCCee
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIP-H--RESVKLQDIQLF-----ID----HLAVYEREGGLQ 147 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~-~--~~~~~i~~~~~~-----~d----~l~~~~~~~~~~ 147 (505)
.||||| .|+.-+.+ ..+.++|+++ ...-. .+. . .....+..++|+ +| ..++....++.
T Consensus 582 afSpdG-~lAsgs~D-----~tv~lwd~~~-~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~t- 653 (902)
T 2oaj_A 582 NNSNIG-FVGIAYAA-----GSLMLIDRRG-PAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGE- 653 (902)
T ss_dssp EECBTS-EEEEEETT-----SEEEEEETTT-TEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSE-
T ss_pred EecCCc-EEEEEeCC-----CcEEEEECCC-CeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCc-
Confidence 499999 76665543 3677888765 21100 111 0 112347889999 76 35555666654
Q ss_pred EEEEEEc
Q 010654 148 KITTYRL 154 (505)
Q Consensus 148 ~l~~~~~ 154 (505)
+.+|++
T Consensus 654 -v~~wd~ 659 (902)
T 2oaj_A 654 -VITYKI 659 (902)
T ss_dssp -EEEEEE
T ss_pred -EEEEEE
Confidence 566776
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=91.57 E-value=7.4 Score=34.90 Aligned_cols=111 Identities=7% Similarity=0.015 Sum_probs=59.5
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGV-DTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..++.++|||+. ++... ....|+++|.++.. ...+.... ... ...++++|+ +|+.... ...|++++..
T Consensus 123 ~~~i~~~~~g~l-~v~~~--~~~~i~~~~~~g~~-~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----~~~i~~~~~~ 193 (286)
T 1q7f_A 123 PRGVTVDNKGRI-IVVEC--KVMRVIIFDQNGNV-LHKFGCSKHLEFPNGVVVNDKQE-IFISDNR----AHCVKVFNYE 193 (286)
T ss_dssp EEEEEECTTSCE-EEEET--TTTEEEEECTTSCE-EEEEECTTTCSSEEEEEECSSSE-EEEEEGG----GTEEEEEETT
T ss_pred ceEEEEeCCCCE-EEEEC--CCCEEEEEcCCCCE-EEEeCCCCccCCcEEEEECCCCC-EEEEECC----CCEEEEEcCC
Confidence 346778999973 44322 24578889876442 33332111 111 234788875 6665432 2488999975
Q ss_pred CCCCceEEEcCCC-CceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 111 NTSETTVLIPHRE-SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 111 ~~~~~~~~~~~~~-~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+ .....+.... ...+.+++.++++-+++........+.+|+.+
T Consensus 194 g--~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 194 G--QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp C--CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred C--CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 4 2222343321 13466788887754444433222257778743
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=91.04 E-value=8.1 Score=36.33 Aligned_cols=138 Identities=12% Similarity=0.061 Sum_probs=67.7
Q ss_pred CceEEEEECCCCCCCCeEEEEecCC--ceEEEEEEeCCCcEEEEEecc---------ccceEEEEEeCCCCCceeeee--
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDD--IYSLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELRVLT-- 73 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~--~~~~~~~~SpDg~~i~~~~~~---------~~~~~l~~~d~~~~~~~~~l~-- 73 (505)
...|.+||+.|++ ....+++.+. ......++||||+.++..... .....+-+.|..+++.+..+.
T Consensus 202 D~TIkIWDl~TGk--~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 202 MNNIVIWNLKTGQ--LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp TSEEEEEETTTCC--EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEECCCCc--EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 3468899998863 3444443221 122345789999987654321 123455556777765122111
Q ss_pred -c-cccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEE
Q 010654 74 -P-RVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKIT 150 (505)
Q Consensus 74 -~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~ 150 (505)
+ ...+.....+.+|..++ ....+ ..+.+.|+.+ ++..-.+....+..+..+.|++|+ .++....++. ++
T Consensus 280 ~p~Gh~~~~lsg~~sg~~lA-SgS~D----gTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T--Ik 351 (356)
T 2w18_A 280 LPPGQAGRFLEGDVKDHCAA-AILTS----GTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN--IF 351 (356)
T ss_dssp CCTTCCCCEEEEEEETTEEE-EEETT----SCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSC--EE
T ss_pred ccCCCcceeEccccCCCEEE-EEcCC----CcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCc--EE
Confidence 1 11111111222233332 22222 3677889876 433224544444345557888874 4555566654 45
Q ss_pred EEEc
Q 010654 151 TYRL 154 (505)
Q Consensus 151 ~~~~ 154 (505)
+|++
T Consensus 352 lWd~ 355 (356)
T 2w18_A 352 VYHY 355 (356)
T ss_dssp EEEE
T ss_pred EecC
Confidence 5553
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.99 E-value=8.5 Score=37.00 Aligned_cols=108 Identities=10% Similarity=0.112 Sum_probs=64.3
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec--ccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~--~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+++||++|+.... ...|.+.|+.+++....+.. ...... ..|+|+|+.|+.-+.+ ..|.++|+.. +.
T Consensus 177 ~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~-~~ 247 (437)
T 3gre_A 177 FVNEEKSLLVALTN---LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRF-NV 247 (437)
T ss_dssp EECSSCEEEEEEET---TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTT-TE
T ss_pred EEcCCCCEEEEEeC---CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCC-cc
Confidence 37788988765544 35689999988763334433 222222 3499999887766643 3688888875 32
Q ss_pred ceEEEcCCCCceeeEEEEeC----CE-EEEEEecCCeeEEEEEEcCC
Q 010654 115 TTVLIPHRESVKLQDIQLFI----DH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~----d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
....+.......+..+.|.+ +. ++++...++ .+.+|++..
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg--~i~iwd~~~ 292 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT--FLTIWNFVK 292 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE--EEEEEETTT
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC--cEEEEEcCC
Confidence 22133322333577776653 45 444444554 577888763
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.98 E-value=8.3 Score=35.62 Aligned_cols=111 Identities=12% Similarity=0.068 Sum_probs=67.3
Q ss_pred eEEEEEEeCC---CcEEEEEeccccceEEEEEeCCC-CCce-eeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 33 YSLGLQASES---KKFLFIASESKITRFVFYLDVSK-PEEL-RVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 33 ~~~~~~~SpD---g~~i~~~~~~~~~~~l~~~d~~~-~~~~-~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
....++|+|| |++|+..... ..|.+.|+.+ +... ..+........ ..|+|+|+.|+..+.+ ..+.+
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~i 112 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA---NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKM 112 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT---SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCC---CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEE
Confidence 4457789999 5776654332 4577777776 3322 33333332332 3499999988866543 37888
Q ss_pred eeCCCCCCceEEEcCCCCceeeEEEE--eCC-EEEEEEecCCeeEEEEEEcCC
Q 010654 107 CPVDNTSETTVLIPHRESVKLQDIQL--FID-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~~~--~~d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.++.+ +.......+ ...+..+.| .++ .++++...++ .+.+|++..
T Consensus 113 wd~~~-~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg--~i~vwd~~~ 160 (368)
T 3mmy_A 113 WDLSS-NQAIQIAQH--DAPVKTIHWIKAPNYSCVMTGSWDK--TLKFWDTRS 160 (368)
T ss_dssp EETTT-TEEEEEEEC--SSCEEEEEEEECSSCEEEEEEETTS--EEEEECSSC
T ss_pred EEcCC-CCceeeccc--cCceEEEEEEeCCCCCEEEEccCCC--cEEEEECCC
Confidence 89876 332223333 234778888 666 4566666665 477888764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=90.84 E-value=0.8 Score=43.78 Aligned_cols=72 Identities=7% Similarity=-0.056 Sum_probs=47.2
Q ss_pred EEEeCCCcEEEEEeccc-c-----ceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 37 LQASESKKFLFIASESK-I-----TRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~-~-----~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..++|||+++++..... . ...+.++|+++.+..+.+.-........++|||+++++..+.. ...|.++|++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~---~~~VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAG---TEVLDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETT---TTEEEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCC---CCeEEEEECC
Confidence 46899999988765411 1 2345599999987333333222122245999999998887621 1489999987
Q ss_pred C
Q 010654 111 N 111 (505)
Q Consensus 111 ~ 111 (505)
+
T Consensus 346 t 346 (368)
T 1mda_H 346 S 346 (368)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=90.75 E-value=9.3 Score=34.61 Aligned_cols=156 Identities=8% Similarity=0.083 Sum_probs=78.2
Q ss_pred EEEEeCCCcEEEEEeccc------------cceEEEEEeCCCCCceeeeeccccc-eeEEee----eeCCEEEEEEcCCC
Q 010654 36 GLQASESKKFLFIASESK------------ITRFVFYLDVSKPEELRVLTPRVVG-VDTAAS----HRGNHFFITRRSDE 98 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~------------~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s----~dg~~l~~~~~~~~ 98 (505)
++.++|||+..+...... ....||++|.+ ++ .+.+...... ....++ +||+.+|+....+
T Consensus 121 ~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~- 197 (314)
T 1pjx_A 121 DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT- 197 (314)
T ss_dssp EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT-
T ss_pred CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEEeccCCCCcceEEEecccCCCCCEEEEEECCC-
Confidence 567889997543322210 12679999987 54 5444332211 123488 9998888776432
Q ss_pred CCCceEEEeeCCCCCCc----eE-EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccCCCceeec
Q 010654 99 LFNSELLACPVDNTSET----TV-LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 172 (505)
Q Consensus 99 ~~~~~l~~~~~~~~~~~----~~-~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 172 (505)
.+|++++++..+.. .+ .+.......+..+.+++++ +++....++ .+.+++.++ +.... .+..
T Consensus 198 ---~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~--~i~~~d~~~-g~~~~------~~~~ 265 (314)
T 1pjx_A 198 ---KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS--HIEVFGPDG-GQPKM------RIRC 265 (314)
T ss_dssp ---TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT--EEEEECTTC-BSCSE------EEEC
T ss_pred ---CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC--EEEEEcCCC-CcEeE------EEeC
Confidence 47888886521221 11 1111110346678888765 444433333 466776542 22111 1222
Q ss_pred cCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 173 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
+.. .+..+.++++++.+++.... ...|+++++..
T Consensus 266 ~~~--~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~~ 299 (314)
T 1pjx_A 266 PFE--KPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp SSS--CEEEEEECTTSSEEEEEETT---TTEEEEEECSS
T ss_pred CCC--CceeEEECCCCCEEEEEeCC---CCeEEEEeCCC
Confidence 211 11122345667656555432 24677777653
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=90.67 E-value=9.7 Score=34.67 Aligned_cols=96 Identities=14% Similarity=0.002 Sum_probs=53.9
Q ss_pred ceEEEEECCCCCCCCeEEEEe-cCCceEEEEEEeC--CCcEEEEEeccccceEEEEEeCCCCC---------ceeeeecc
Q 010654 8 DKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASE--SKKFLFIASESKITRFVFYLDVSKPE---------ELRVLTPR 75 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~-~~~~~~~~~~~Sp--Dg~~i~~~~~~~~~~~l~~~d~~~~~---------~~~~l~~~ 75 (505)
..|.+|++.++....+.+..- ........++|+| ||++|+..... ..|.+.|+.++. ....+...
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD---KTVKLWEEDPDQEECSGRRWNKLCTLNDS 109 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEECTTSCTTSSCSEEEEEEECCC
T ss_pred CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC---CeEEEEecCCCcccccccCcceeeeeccc
Confidence 468888987653322222221 1233445788999 68887655432 346666766653 01222222
Q ss_pred cccee-EEeeee--CCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 76 VVGVD-TAASHR--GNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 76 ~~~~~-~~~s~d--g~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..... ..|+|+ ++.|+..+.+ ..|.++|+..
T Consensus 110 ~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~ 143 (351)
T 3f3f_A 110 KGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALE 143 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSS
T ss_pred CCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCC
Confidence 22222 349999 8877766643 3788888765
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=90.43 E-value=1.4 Score=46.09 Aligned_cols=156 Identities=11% Similarity=0.058 Sum_probs=80.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
++++.+.++.|++.- .....|+++++++.. .+.+.... .. ....++|++++||+.... ...+|+++++++ .
T Consensus 457 glavD~~~g~LY~tD--~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~---~~~~I~~~~~dG-~ 529 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTD--SVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNG-V 529 (699)
T ss_dssp CEECCCSSSBCEECC--TTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCS---SSCCEEBCCSSS-C
T ss_pred eEEEEeeCCcEEEEe--ccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccC---CCCeEEEEeCCC-C
Confidence 345555555555532 234578999988765 44443321 11 123478888888776422 235899999876 2
Q ss_pred CceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEE
Q 010654 114 ETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRIL 191 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (505)
..+.++.... ....+++++.+ .||++-.. ..++..++++ |...+.+. .... .. ..+..++.+++.+
T Consensus 530 ~~~~l~~~~l-~~PnGlavd~~~~~LY~aD~~--~~~I~~~d~d--G~~~~~~~-----~~~~-~~-~~P~glavd~~~l 597 (699)
T 1n7d_A 530 DIYSLVTENI-QWPNGITLDLLSGRLYWVDSK--LHSISSIDVN--GGNRKTIL-----EDEK-RL-AHPFSLAVFEDKV 597 (699)
T ss_dssp CCCEESCSSC-SSCCCEEECTTTCCEEEEETT--TTEEEEECSS--SSCCEEEC-----CCSS-SC-SSCCCCEEETTEE
T ss_pred CeeEEEeCCC-CCccEEEEeccCCEEEEEecC--CCeEEEEccC--CCceEEEE-----ecCC-cC-CCceEeEEECCEE
Confidence 2332333322 23457888753 55555433 3457777765 33222111 0000 00 0112334556655
Q ss_pred EEEEecCCCCceEEEEECCCCc
Q 010654 192 RFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 192 ~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++- ..-..|.+++..+++
T Consensus 598 ywtd---~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 598 FWTD---IINEAIFSANRLTGS 616 (699)
T ss_dssp EEEC---STTTCEEEEETTTEE
T ss_pred EEEe---CCCCeEEEEEccCCC
Confidence 5443 233567777765554
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=90.29 E-value=11 Score=34.85 Aligned_cols=133 Identities=9% Similarity=0.035 Sum_probs=67.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~d 86 (505)
..|.+|+... +....+.. .......++|||||++|+.... ...|.+.|+.... ....+.....-....|+|+
T Consensus 194 ~~i~iwd~~~---~~~~~~~~-h~~~v~~~~~s~~g~~l~sgs~---dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~ 266 (343)
T 2xzm_R 194 GRLKVWNTNF---QIRYTFKA-HESNVNHLSISPNGKYIATGGK---DKKLLIWDILNLTYPQREFDAGSTINQIAFNPK 266 (343)
T ss_dssp SEEEEEETTT---EEEEEEEC-CSSCEEEEEECTTSSEEEEEET---TCEEEEEESSCCSSCSEEEECSSCEEEEEECSS
T ss_pred CEEEEEcCCC---ceeEEEcC-ccccceEEEECCCCCEEEEEcC---CCeEEEEECCCCcccceeecCCCcEEEEEECCC
Confidence 3567777421 22223332 2334457889999999765433 3457888884332 1222212111122349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceE-EEcC----------CCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTV-LIPH----------RESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~----------~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~ 154 (505)
+..++.-+ . ..+.++++.+...... .+.. .....+..++|++++ .+++...++. +.+|++
T Consensus 267 ~~~la~~~-d-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~--v~~w~~ 338 (343)
T 2xzm_R 267 LQWVAVGT-D-----QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGV--IRTFSF 338 (343)
T ss_dssp SCEEEEEE-S-----SCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSE--EEEEEE
T ss_pred CCEEEEEC-C-----CCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCce--EEEEEE
Confidence 98665333 2 1356666654211110 1110 112246788998874 4455566654 556665
Q ss_pred C
Q 010654 155 P 155 (505)
Q Consensus 155 ~ 155 (505)
.
T Consensus 339 ~ 339 (343)
T 2xzm_R 339 E 339 (343)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=90.25 E-value=18 Score=37.14 Aligned_cols=137 Identities=11% Similarity=0.029 Sum_probs=79.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-eeEEee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG-VDTAAS 84 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s 84 (505)
...|.+.++.+... ..+..-..-....++++.+++..|+++.. ....|+++++++.. .+.+.... .. ....+.
T Consensus 14 ~~~I~~i~l~~~~~--~~~~~~~~~~~~~~l~~d~~~~~lywtD~--~~~~I~r~~~~g~~-~~~v~~~g~~~P~GlAvD 88 (628)
T 4a0p_A 14 RADIRRISLETNNN--NVAIPLTGVKEASALDFDVTDNRIYWTDI--SLKTISRAFMNGSA-LEHVVEFGLDYPEGMAVD 88 (628)
T ss_dssp TTEEEEEESSCTTC--EEECCCCSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEEECSSCSCCCEEEEE
T ss_pred CCcEEEEECCCCCc--ceEEEcCCCCceEEEEEECCCCEEEEEEC--CCCeEEEEECCCCC-cEEEEeCCCCCcceEEEE
Confidence 34577778865321 21211112223457789998888887643 24679999998765 44443321 11 113366
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+.++.||+.... ..+|.++++++ ...+.++..... ...++..++ +.||++- .....++...+++
T Consensus 89 ~~~~~LY~tD~~----~~~I~v~~~dG-~~~~~l~~~~l~-~P~~iavdp~~G~lY~tD-~g~~~~I~r~~~d 154 (628)
T 4a0p_A 89 WLGKNLYWADTG----TNRIEVSKLDG-QHRQVLVWKDLD-SPRALALDPAEGFMYWTE-WGGKPKIDRAAMD 154 (628)
T ss_dssp TTTTEEEEEETT----TTEEEEEETTS-TTCEEEECSSCC-CEEEEEEETTTTEEEEEE-CSSSCEEEEEETT
T ss_pred eCCCEEEEEECC----CCEEEEEecCC-CcEEEEEeCCCC-CcccEEEccCCCeEEEeC-CCCCCEEEEEeCC
Confidence 678889887542 25899999986 333334444433 356888875 3555543 2334567777765
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=89.89 E-value=4.2 Score=36.06 Aligned_cols=107 Identities=13% Similarity=0.209 Sum_probs=59.4
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
++.++|||+ |++... ....|+++|.++.. ........ .. ....++++| .+|+.... ...|++++..+ .
T Consensus 154 ~i~~~~~g~-l~v~~~--~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~----~~~v~~~~~~~-~ 223 (270)
T 1rwi_B 154 GVAVDNSGN-VYVTDT--DNNRVVKLEAESNN-QVVLPFTDITAPWGIAVDEAG-TVYVTEHN----TNQVVKLLAGS-T 223 (270)
T ss_dssp CEEECTTCC-EEEEEG--GGTEEEEECTTTCC-EEECCCSSCCSEEEEEECTTC-CEEEEETT----TSCEEEECTTC-S
T ss_pred eEEEeCCCC-EEEEEC--CCCEEEEEecCCCc-eEeecccCCCCceEEEECCCC-CEEEEECC----CCcEEEEcCCC-C
Confidence 567899998 444332 24579999988765 33322111 11 123377777 67766543 24788998865 2
Q ss_pred CceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
... .+.......+.++.+++++ +++....+ .++.++++.
T Consensus 224 ~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~--~~v~~~~~~ 263 (270)
T 1rwi_B 224 TST-VLPFTGLNTPLAVAVDSDRTVYVADRGN--DRVVKLTSL 263 (270)
T ss_dssp CCE-ECCCCSCSCEEEEEECTTCCEEEEEGGG--TEEEEECCC
T ss_pred cce-eeccCCCCCceeEEECCCCCEEEEECCC--CEEEEEcCC
Confidence 222 2222222346678887764 44443333 456777654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.85 E-value=8.1 Score=35.72 Aligned_cols=137 Identities=10% Similarity=0.067 Sum_probs=67.8
Q ss_pred ceEEEEECCCCCCCCe--EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EE
Q 010654 8 DKAWLHKLEADQSNDI--CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~--~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~ 82 (505)
..|.+|++.+....-. ..+.+ .......+.|+|||++|+..... ..|.+.|..++. ....+..+...+. ..
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D---~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSSYD---DTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEcCC---CeEEEEECCCCCeeEEEEccCCCCcEEEEE
Confidence 4588899854322222 22332 23345578899999987644332 234444544442 1223333322222 34
Q ss_pred eeeeC--CEEEEEEcCCCCCCceEEEeeCCCC---CCceE----EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 83 ASHRG--NHFFITRRSDELFNSELLACPVDNT---SETTV----LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 83 ~s~dg--~~l~~~~~~~~~~~~~l~~~~~~~~---~~~~~----~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
|+|++ ..|+--+ .++ .+.+.++.+. ....| .+.......+..+.|+++.+++....++. +.+|+
T Consensus 205 ~~~~~~~~~l~s~s-~D~----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~--v~iw~ 277 (330)
T 2hes_X 205 FDKTEGVFRLCSGS-DDS----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGV--LAVYE 277 (330)
T ss_dssp ECCSSSSCEEEEEE-TTS----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSC--EEEEE
T ss_pred ecCCCCeeEEEEEe-CCC----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCE--EEEEE
Confidence 88884 3444333 222 3444444221 12223 12221233577888988777777777664 55676
Q ss_pred cC
Q 010654 154 LP 155 (505)
Q Consensus 154 ~~ 155 (505)
+.
T Consensus 278 ~~ 279 (330)
T 2hes_X 278 EV 279 (330)
T ss_dssp EE
T ss_pred cC
Confidence 54
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=89.83 E-value=13 Score=34.78 Aligned_cols=174 Identities=10% Similarity=0.044 Sum_probs=88.2
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCC-CceeeeeccccceeEEeeeeC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP-EELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~~~~s~dg 87 (505)
.|.+||+.++. ....++ .+.-.....+++++.. +.. ...+++.|+.++ +....+.. . .....+++
T Consensus 82 ~v~iWd~~~~~--~~~~~~--~~~~v~~v~~~~~~~~--~~~----~~~i~i~d~~~~~~~~~~~~~-~-~~~~~~s~-- 147 (355)
T 3vu4_A 82 VVHIWDDVKKQ--DVSRIK--VDAPVKDLFLSREFIV--VSY----GDVISVFKFGNPWKRITDDIR-F-GGVCEFSN-- 147 (355)
T ss_dssp EEEEEETTTTE--EEEEEE--CSSCEEEEEECSSEEE--EEE----TTEEEEEESSTTCCBSSCCEE-E-EEEEEEET--
T ss_pred EEEEEECCCCc--EEEEEE--CCCceEEEEEcCCEEE--EEE----cCEEEEEECCCCceeeEEecc-C-CceEEEEc--
Confidence 78889987642 222332 2223446678887633 222 345889999887 32333322 1 11233666
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCC--------------c-eEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEE
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSE--------------T-TVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITT 151 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~--------------~-~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~ 151 (505)
+.+++.+.. ....+.++|+..... + ...+.... ..+..+.|++++ ++++...++. .+.+
T Consensus 148 ~~la~~sg~---~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~~~~~s~~g~~l~s~s~d~~-~v~i 222 (355)
T 3vu4_A 148 GLLVYSNEF---NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIKMVRLNRKSDMVATCSQDGT-IIRV 222 (355)
T ss_dssp TEEEEEESS---CTTCEEEEECCC------------------CCEEECCCS-SCEEEEEECTTSSEEEEEETTCS-EEEE
T ss_pred cEEEEeCCC---cCcEEEEEECCCCCccccccccccccccCcccEEEEccC-CceEEEEECCCCCEEEEEeCCCC-EEEE
Confidence 677776322 124677788765210 0 11333333 357889999874 4555555552 2678
Q ss_pred EEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 152 YRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
|++.. +..+..+..+ .....+..+.+++++..+ ++.+.. ..+.+.++..+
T Consensus 223 wd~~~-~~~~~~~~~g------~h~~~v~~~~~s~~~~~l-~s~s~d---~~v~iw~~~~~ 272 (355)
T 3vu4_A 223 FKTED-GVLVREFRRG------LDRADVVDMKWSTDGSKL-AVVSDK---WTLHVFEIFND 272 (355)
T ss_dssp EETTT-CCEEEEEECT------TCCSCEEEEEECTTSCEE-EEEETT---CEEEEEESSCC
T ss_pred EECCC-CcEEEEEEcC------CCCCcEEEEEECCCCCEE-EEEECC---CEEEEEEccCC
Confidence 88764 3322211100 011113334567777754 344332 45666666543
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=89.63 E-value=0.68 Score=42.12 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
.+++...++.+.++. ...+|.+.|||+||.++..++...
T Consensus 120 ~~~~~~~l~~~~~~~--~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 120 VNDYFPVVQEQLTAH--PTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCCeEEEeccChHHHHHHHHHHHH
Confidence 456666676666542 135899999999999988877653
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.60 E-value=8 Score=37.64 Aligned_cols=137 Identities=11% Similarity=0.026 Sum_probs=72.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-ceeeeeccccceeEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE-ELRVLTPRVVGVDTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s 84 (505)
.+|+++++.+. ....+.. ....-..+++++||++|++..... ....++.++.++.. ..+.+.....-....++
T Consensus 159 ~~I~~id~~~~--~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavd 234 (430)
T 3tc9_A 159 HPTRLIDFEKE--YVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETH 234 (430)
T ss_dssp EEEEEEETTTT--EEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEEC
T ss_pred CcEEEEECCCC--EEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEe
Confidence 56777777543 2222322 222345678999999877765432 23456666655432 11233211111123478
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~ 155 (505)
|+++.||+.... ..+|++++.++ +....+...........+.+++++ ++++-..+ .++..++.+
T Consensus 235 p~~g~lyv~d~~----~~~V~~~~~~~-~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~--~~I~~~~~d 300 (430)
T 3tc9_A 235 PINGELYFNSWN----AGQVFRYDFTT-QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ--HYILRSDYD 300 (430)
T ss_dssp TTTCCEEEEETT----TTEEEEEETTT-TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT--TEEEEEEEE
T ss_pred CCCCEEEEEECC----CCEEEEEECCC-CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC--CEEEEEeCC
Confidence 866677777643 24899999875 332112322222234577887763 45443333 456666654
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=89.55 E-value=8.8 Score=34.80 Aligned_cols=100 Identities=13% Similarity=0.114 Sum_probs=55.5
Q ss_pred EEEEEeCCCcEEEEE----eccccceEEEEEeCCCCCceeeeec-----cccce-eEEeeeeCCEEEEEEcCCCCCCceE
Q 010654 35 LGLQASESKKFLFIA----SESKITRFVFYLDVSKPEELRVLTP-----RVVGV-DTAASHRGNHFFITRRSDELFNSEL 104 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~----~~~~~~~~l~~~d~~~~~~~~~l~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l 104 (505)
.++.|++||+.++.. ........|+++|.++++ .+.+.. ..... ...+++|++.||+.+.. ..|
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-----~~l 94 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK-KTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-----LGL 94 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC-EEEEECCEETTEECCEEEEEECSSSSEEEEEETT-----TEE
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc-EEEEEecccCCCCCCCceEEEecCCCcEEEEECC-----CCE
Confidence 478899999754331 112234579999988886 555432 11111 12377884567776642 278
Q ss_pred EEeeCCCCCCceEE-EcCC---CCceeeEEEEeCC-EEEEEEe
Q 010654 105 LACPVDNTSETTVL-IPHR---ESVKLQDIQLFID-HLAVYER 142 (505)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~~---~~~~i~~~~~~~d-~l~~~~~ 142 (505)
++++.+ +....+ .... ....+..+.++++ .+++...
T Consensus 95 ~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 95 LVVQTD--GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp EEEETT--SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred EEEeCC--CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 889876 333312 2211 1123567778776 4555543
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=88.82 E-value=3.6 Score=40.18 Aligned_cols=111 Identities=10% Similarity=0.112 Sum_probs=63.7
Q ss_pred EEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.++++| ++..|++.... ..|+++|++++. ++.+....... ...++++|++||+....++.....++.++..+ .
T Consensus 141 ~lavdp~~~g~Lyv~d~~---~~I~~id~~~~~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~ 215 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQ---HPTRLIDFEKEY-VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-G 215 (430)
T ss_dssp EEEEETTEEEEEEEEEBT---EEEEEEETTTTE-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-T
T ss_pred EEEECCCCCCeEEEEeCC---CcEEEEECCCCE-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-c
Confidence 567888 46666665443 789999999875 66655432222 23489999988888764332334566666544 2
Q ss_pred Cc-eEEEcCCCCceeeEEEEeC-C-EEEEEEecCCeeEEEEEEcC
Q 010654 114 ET-TVLIPHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 114 ~~-~~~~~~~~~~~i~~~~~~~-d-~l~~~~~~~~~~~l~~~~~~ 155 (505)
.. ...+.. . ....++.+++ + .++++-..+ .+++.++.+
T Consensus 216 ~~~~~~l~~-~-~~p~giavdp~~g~lyv~d~~~--~~V~~~~~~ 256 (430)
T 3tc9_A 216 FKVITELTK-G-QNCNGAETHPINGELYFNSWNA--GQVFRYDFT 256 (430)
T ss_dssp SCSEEEEEE-C-SSCCCEEECTTTCCEEEEETTT--TEEEEEETT
T ss_pred eeeeeeecc-C-CCceEEEEeCCCCEEEEEECCC--CEEEEEECC
Confidence 11 112221 1 1244666776 4 455544433 457777765
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.52 E-value=28 Score=36.88 Aligned_cols=111 Identities=5% Similarity=0.043 Sum_probs=67.9
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
.++++.|.+.+|+|+-+. ....|+++++++.. .+.+....-. ....++++++.||+.-.. ..+|.++++++
T Consensus 517 ~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~LYwaD~~----~~~I~~~d~dG- 589 (791)
T 3m0c_C 517 RAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNG- 589 (791)
T ss_dssp EEEEEETTTTEEEEEECS-SSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETT----TTEEEEEETTS-
T ss_pred ceEEEecCCCCEEEecCC-CCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeEEEEeCC----CCcEEEEecCC-
Confidence 467788988888887543 23679999998765 5444432211 113377778899988532 25899999986
Q ss_pred CCceEEEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 113 SETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 113 ~~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
...+.++... .-....+++.++++||++-..+. .+..++.
T Consensus 590 ~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~--~I~~~dk 630 (791)
T 3m0c_C 590 GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINE--AIFSANR 630 (791)
T ss_dssp CSCEEEEECTTTTSSEEEEEEETTEEEEEETTTT--EEEEEET
T ss_pred CceEEEecCCCccCCCCEEEEeCCEEEEEECCCC--EEEEEeC
Confidence 3223244321 11123477788888777655443 4555553
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=87.97 E-value=16 Score=33.37 Aligned_cols=123 Identities=9% Similarity=0.019 Sum_probs=61.4
Q ss_pred EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCce
Q 010654 24 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSE 103 (505)
Q Consensus 24 ~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 103 (505)
.+.+-+.+.+-.++.|++||+ |++... ....|+++|.++.. ...+.....-....+++||+ ||+.... ....+
T Consensus 24 ~~~~~p~~~~pegia~~~~g~-lyv~d~--~~~~I~~~d~~g~~-~~~~~~~~~p~gia~~~dG~-l~vad~~--~~~~~ 96 (306)
T 2p4o_A 24 IITSFPVNTFLENLASAPDGT-IFVTNH--EVGEIVSITPDGNQ-QIHATVEGKVSGLAFTSNGD-LVATGWN--ADSIP 96 (306)
T ss_dssp EEEEECTTCCEEEEEECTTSC-EEEEET--TTTEEEEECTTCCE-EEEEECSSEEEEEEECTTSC-EEEEEEC--TTSCE
T ss_pred EeEeCCCCCCcceEEECCCCC-EEEEeC--CCCeEEEECCCCce-EEEEeCCCCceeEEEcCCCc-EEEEecc--CCcce
Confidence 333333345666899999998 444432 24579999988653 22222111111123788887 6555422 11236
Q ss_pred EEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 104 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|++++..+ +....+..........++....+..+++... ....++.++..
T Consensus 97 v~~~d~~~-g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-~~g~i~~~d~~ 146 (306)
T 2p4o_A 97 VVSLVKSD-GTVETLLTLPDAIFLNGITPLSDTQYLTADS-YRGAIWLIDVV 146 (306)
T ss_dssp EEEEECTT-SCEEEEEECTTCSCEEEEEESSSSEEEEEET-TTTEEEEEETT
T ss_pred EEEEcCCC-CeEEEEEeCCCccccCcccccCCCcEEEEEC-CCCeEEEEeCC
Confidence 88888665 4433233222222233444333333333332 22357777654
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.93 E-value=3.2 Score=41.74 Aligned_cols=135 Identities=11% Similarity=0.098 Sum_probs=72.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEE--EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-c-e-eEE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGL--QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-G-V-DTA 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~--~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~-~-~~~ 82 (505)
..|.+||+.++. .....+.... ....++ .++|||..++++.+. ...+.+.|+.+++....+..+.. + . ...
T Consensus 287 gtV~lWD~~~~~-~~~~~~~~H~-~~V~sv~~~~s~~g~~~laS~S~--D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 287 GFVAEFDLTDPE-VPSFYDQVHD-SYILSVSTAYSDFEDTVVSTVAV--DGYFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp SEEEEEETTBCS-SCSEEEECSS-SCEEEEEEECCTTSCCEEEEEET--TSEEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred CEEEEEECCCCC-CceEEeeccc-ccEEEEEEEcCCCCCeEEEEecc--CCeEEEEECCCCCcccccccccccCcccceE
Confidence 468899997652 2223343322 223344 679998444444332 33577778776542223332221 1 1 245
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+|+++.|+..+ .+ ..+.+.|+.. +.....+..... .+..++|++++ .++....++. +.+|++.
T Consensus 363 fsp~~~~l~s~~-~d----~tv~lwd~~~-~~~~~~l~gH~~-~V~sva~Sp~g~~l~Sgs~Dgt--v~lwd~~ 427 (524)
T 2j04_B 363 YCPQIYSYIYSD-GA----SSLRAVPSRA-AFAVHPLVSRET-TITAIGVSRLHPMVLAGSADGS--LIITNAA 427 (524)
T ss_dssp EETTTTEEEEEC-SS----SEEEEEETTC-TTCCEEEEECSS-CEEEEECCSSCCBCEEEETTTE--EECCBSC
T ss_pred eCCCcCeEEEeC-CC----CcEEEEECcc-cccceeeecCCC-ceEEEEeCCCCCeEEEEECCCE--EEEEech
Confidence 999998755333 21 2577778765 322122332323 47788999874 4555566654 5667754
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=87.84 E-value=10 Score=36.18 Aligned_cols=169 Identities=10% Similarity=-0.061 Sum_probs=0.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-------
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD------- 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~------- 80 (505)
..|.+||+.++ ...............++|+|++..++++... ...|.+.|+.+++....+........
T Consensus 166 ~tv~~Wd~~~~---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~--d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 166 CTLIIWRLTDE---GPILAGYPLSSPGISVQFRPSNPNQLIVGER--NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp SEEEEEEEETT---EEEEEEEECSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred CeEEEEECCCC---ceeeeecCCCCCcEEEEECCCCCceEEecCC--CCEEEEEECCCCcccccccccCCcccceEEecc
Q ss_pred --------------------EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEE--
Q 010654 81 --------------------TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA-- 138 (505)
Q Consensus 81 --------------------~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~-- 138 (505)
..+++||+.|+-.+.. ..+.+.|+.. +... ..-......+..+.+.++..-
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d-----~~i~vwd~~~-~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKS-----GAWLRWNLFA-NNDY-NEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEEEECTT-----SEEEEEEC---------------------CCSCSEEEEC
T ss_pred cccceeeeecccccccceeeeeecCCCCEEEEEeCC-----CCEEEEECcc-CCCC-ceEeeecCccccEEEcccccccc
Q ss_pred -----------------EEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 139 -----------------VYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 139 -----------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
+++.-.....+.+|++.. +. ....+......+..+.+++||+.++.....
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-~~--------~~~~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYE-KD--------SNSIPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTC-TT--------CCEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCC-Cc--------EEEEecCCCCcEEEEEEcCCCCEEEEEeCC
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=87.77 E-value=27 Score=35.81 Aligned_cols=185 Identities=12% Similarity=0.093 Sum_probs=0.0
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEE-e
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTA-A 83 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~-~ 83 (505)
....|.+.++.....+.+++... .....++++++++..|+++-.. ...|+++++++.. ....+.........- +
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~--~~~~~~ld~~~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv 91 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGG--LEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 91 (619)
T ss_dssp CSSBEEEECCC---------CBC--CSCEEEEEEETTTTEEEEEETT--TTEEEEEEC-----CEEEECSSCSCEEEEEE
T ss_pred ccccEEEEeCCCCcceEEEEEcC--CCceEEEEEEeCCCEEEEEECC--CCeEEEEEccCCCceEEEEeCCCCCcCeEEE
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
++.++.||+.....+ +|.++++++ ...+.++...... ..++..++. +.+|....+...++...+++ |.
T Consensus 92 D~~~~~ly~~d~~~~----~I~v~~~dG-~~~~~l~~~~l~~-P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d--G~--- 160 (619)
T 3s94_A 92 DWLGEKLYWTDSETN----RIEVSNLDG-SLRKVLFWQELDQ-PRAIALDPSSGFMYWTDWGEVPKIERAGMD--GS--- 160 (619)
T ss_dssp ETTTTEEEEEETTTT----EEEEEETTS-CSCEEEECSSCSC-CCCEEEETTTTEEEEEECSSSCEEEEEETT--SC---
T ss_pred EecCCEEEEEeCCCC----EEEEEECCC-CCEEEEEeCCCCC-CceEEEecCCCeEEEeccCCCCEEEEEECC--CC---
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
....-.........++.++++++.+++. ...-..|+.+++.+.
T Consensus 161 ----~~~~l~~~~~~~P~Glald~~~~~LY~a---D~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 161 ----SRFIIINSEIYWPNGLTLDYEEQKLYWA---DAKLNFIHKSNLDGT 203 (619)
T ss_dssp ----SCEEEECSSCSSEEEEEEETTTTEEEEE---ETTTCCEEEESSSCC
T ss_pred ----ceEEEEeCCCCCCcEEEEEccCCEEEEE---eCCCCeEEEecCCCC
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=87.41 E-value=5.8 Score=35.12 Aligned_cols=107 Identities=11% Similarity=0.140 Sum_probs=57.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
++.+++||+ |++... ...|+++|.++.. ...+.... ... ...++++|+ +|+.... ...|++++..+ .
T Consensus 71 ~i~~~~~g~-l~v~~~---~~~i~~~d~~~~~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----~~~i~~~~~~~-~ 139 (270)
T 1rwi_B 71 GLAVDGAGT-VYVTDF---NNRVVTLAAGSNN-QTVLPFDGLNYPEGLAVDTQGA-VYVADRG----NNRVVKLAAGS-K 139 (270)
T ss_dssp CEEECTTCC-EEEEET---TTEEEEECTTCSC-CEECCCCSCSSEEEEEECTTCC-EEEEEGG----GTEEEEECTTC-C
T ss_pred eeEECCCCC-EEEEcC---CCEEEEEeCCCce-EeeeecCCcCCCcceEECCCCC-EEEEECC----CCEEEEEECCC-c
Confidence 567899998 444433 4579999988765 44332111 111 234778876 6665432 24788887543 2
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
... .........+.++.+++++-+++.... ...+.+++..
T Consensus 140 ~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~-~~~i~~~~~~ 179 (270)
T 1rwi_B 140 TQT-VLPFTGLNDPDGVAVDNSGNVYVTDTD-NNRVVKLEAE 179 (270)
T ss_dssp SCE-ECCCCSCCSCCCEEECTTCCEEEEEGG-GTEEEEECTT
T ss_pred eeE-eeccccCCCceeEEEeCCCCEEEEECC-CCEEEEEecC
Confidence 222 222222223567777765433333322 2357777754
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=87.25 E-value=13 Score=37.59 Aligned_cols=143 Identities=13% Similarity=0.060 Sum_probs=0.0
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEE-e-CCCcEEEEEe---------------ccccceEEEEEeCCCCC-c
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQA-S-ESKKFLFIAS---------------ESKITRFVFYLDVSKPE-E 68 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~-S-pDg~~i~~~~---------------~~~~~~~l~~~d~~~~~-~ 68 (505)
+.+|-+.|+.+ .+...+.+-+...-.-+.+. + |||+++++.. .+...+.+-++|.++.+ .
T Consensus 111 ~~rVavIdl~t--~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 111 NTRVARVRCDV--MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp TTEEEEEETTT--TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred CCEEEEEECCC--ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Q ss_pred eeeeeccccceeEEeeeeCCEEEEEEcCCCCC---------------------------------CceEEEeeCCC--CC
Q 010654 69 LRVLTPRVVGVDTAASHRGNHFFITRRSDELF---------------------------------NSELLACPVDN--TS 113 (505)
Q Consensus 69 ~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~---------------------------------~~~l~~~~~~~--~~ 113 (505)
++..... .-....+||||+++|..+...... ...+-++|.+. ..
T Consensus 189 ~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~ 267 (595)
T 1fwx_A 189 WQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASS 267 (595)
T ss_dssp EEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCC
T ss_pred EEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCc
Q ss_pred C-ceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 114 E-TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 114 ~-~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
. .. .++.... ..++..++|+.+++....+..++.+|++.
T Consensus 268 ~~~~-~Ipvg~~--PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 268 LFTR-YIPIANN--PHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp SSEE-EEEEESS--CCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred eeEE-EEecCCC--ceEEEEcCCCCEEEEeCCCCCeEEEEECc
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=87.01 E-value=7.6 Score=36.23 Aligned_cols=96 Identities=8% Similarity=0.074 Sum_probs=55.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecC-----CceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeecc-----
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKD-----DIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPR----- 75 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~-----~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~----- 75 (505)
..+|+++|+.+++ ....+.-+. ..+.-+++++|++..++++..+. ....|+++|+++++ ...+...
T Consensus 92 ~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~ 168 (343)
T 2qe8_A 92 VPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AARVLQGYPGIA 168 (343)
T ss_dssp CCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EEEECTTCTTTS
T ss_pred CCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EEEEecCCCccc
Confidence 4578888886642 222333211 12334677888877776654321 45689999998775 3332211
Q ss_pred -------cc------------------cee-EEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 76 -------VV------------------GVD-TAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 76 -------~~------------------~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
.+ +.. ..|||||+.||+..... .+||.++.
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~----~~l~~~~~ 224 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS----TSMYRIKS 224 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC----SEEEEEEH
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC----CeEEEEEH
Confidence 00 111 23899999888886542 38888874
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=86.65 E-value=0.9 Score=41.09 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.+++...++.+.++. ...+|.+.|||+||.++..++..
T Consensus 108 ~~~~~~~l~~~~~~~--p~~~i~vtGHSLGGalA~l~a~~ 145 (261)
T 1uwc_A 108 QDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCceEEEEecCHHHHHHHHHHHH
Confidence 345566666665542 13589999999999998877764
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=86.61 E-value=0.23 Score=40.88 Aligned_cols=50 Identities=22% Similarity=0.178 Sum_probs=36.8
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcC--------------------CCCCeEEEEecCCCCCCCCCChHH
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMK--------------------TDDNILLFKCELGAGHFSKSGRFE 478 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~--------------------~~~~~~~~~~~~~~gH~~~~~~~~ 478 (505)
++||.+|+.|.+||...++.+.++|.-.+ ...+++... ++||..+.++++
T Consensus 66 rvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~---~AGHmVP~dqP~ 135 (153)
T 1whs_B 66 RIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVR---GAGHEVPLHRPR 135 (153)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEET---TCCSSHHHHSHH
T ss_pred eEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEEC---CCcccCcccCHH
Confidence 49999999999999999999999886211 133444444 999986544444
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=85.47 E-value=19 Score=31.98 Aligned_cols=110 Identities=15% Similarity=0.229 Sum_probs=59.2
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VG-VDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..++.++|||+ |++... ....|+++|.++.. ...+.... .. ....++++|+ +|+....+ +.+|.+++.+
T Consensus 166 p~~i~~~~~g~-l~v~~~--~~~~i~~~~~~g~~-~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~---~~~i~~~~~~ 237 (286)
T 1q7f_A 166 PNGVVVNDKQE-IFISDN--RAHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSNGE-ILIADNHN---NFNLTIFTQD 237 (286)
T ss_dssp EEEEEECSSSE-EEEEEG--GGTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTTCC-EEEEECSS---SCEEEEECTT
T ss_pred cEEEEECCCCC-EEEEEC--CCCEEEEEcCCCCE-EEEEccCCccCCCcEEEECCCCC-EEEEeCCC---CEEEEEECCC
Confidence 34678899998 333322 24578899986543 44443211 11 1234788884 56555331 1378888865
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcC
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~ 155 (505)
+ .....+........+.++.++++ .++++ ..+ ..+.+|++.
T Consensus 238 g-~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~--~~v~v~~~~ 279 (286)
T 1q7f_A 238 G-QLISALESKVKHAQCFDVALMDDGSVVLA-SKD--YRLYIYRYV 279 (286)
T ss_dssp S-CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETT--TEEEEEECS
T ss_pred C-CEEEEEcccCCCCcceeEEECCCCcEEEE-CCC--CeEEEEEcc
Confidence 4 22221222222223557888876 44444 444 457777764
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.56 E-value=21 Score=35.33 Aligned_cols=96 Identities=4% Similarity=0.036 Sum_probs=55.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCce--EEEEEE-------eCCCcEEEEEeccc----cceEEEEEeCCC-CCce----
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIY--SLGLQA-------SESKKFLFIASESK----ITRFVFYLDVSK-PEEL---- 69 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~--~~~~~~-------SpDg~~i~~~~~~~----~~~~l~~~d~~~-~~~~---- 69 (505)
.+|++.|+.++ .-..+.......+ -..++| ++||++|++..... ....+++++.+. +. +
T Consensus 162 ~~i~~ID~~~~--~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~-~~~~~ 238 (496)
T 3kya_A 162 KAIQLIDLKNR--MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGT-FDDRS 238 (496)
T ss_dssp EEEEEEETTTT--EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSC-CSTTS
T ss_pred CeEEEEECCCC--EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCc-eeecc
Confidence 45777777553 2233333211112 346789 99999877775443 245688887554 33 2
Q ss_pred --eeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 70 --RVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 70 --~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
+.+..........++|+++.||+..... .+|++++++
T Consensus 239 ~~~~v~~~~~p~giavdp~~g~LYvtd~~~----g~V~r~d~~ 277 (496)
T 3kya_A 239 DIQLIAAYKQCNGATIHPINGELYFNSYEK----GQVFRLDLV 277 (496)
T ss_dssp CEEEEEEESCCCCEEECTTTCCEEEEETTT----TEEEEECHH
T ss_pred cceeeccCCCceEEEEcCCCCeEEEEECCC----CEEEEEecc
Confidence 2232111111234788888888887542 489999986
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=84.26 E-value=24 Score=31.93 Aligned_cols=136 Identities=12% Similarity=0.098 Sum_probs=73.5
Q ss_pred ceEEEEECCCCCCCC-----eEEEEe-cCCceEEEEEEeCC--CcEEEEEeccccceEEEEEeCCCCCceeeee------
Q 010654 8 DKAWLHKLEADQSND-----ICLYHE-KDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPEELRVLT------ 73 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~-----~~~~~~-~~~~~~~~~~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~------ 73 (505)
..|.+|++.+++... ..+..- ........+.|+|+ |++|+.... ...|.+.|+.++.....+.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChHHhcccccccccc
Confidence 458888887653211 222222 22334557889999 988776543 3468888888765111111
Q ss_pred -------ccccc-eeEEeeee---CCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCC-----
Q 010654 74 -------PRVVG-VDTAASHR---GNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFID----- 135 (505)
Q Consensus 74 -------~~~~~-~~~~~s~d---g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d----- 135 (505)
..... ....|+|+ ++.++..+.. ..+...+... +.... .+.. ....+..+.|.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE-----QAIIYQRGKD-GKLHVAAKLPG-HKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT-----EEEEEEECTT-SCEEEEEECCC-CCSCEEEEEECCCSSCSS
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCC-----CcEEEEccCC-CceeeeeecCC-CCcceeEEEECCCCCCcc
Confidence 01111 12348887 6666655543 1333333333 22221 2222 2335788999987
Q ss_pred EEEEEEecCCeeEEEEEEcC
Q 010654 136 HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 136 ~l~~~~~~~~~~~l~~~~~~ 155 (505)
.++++...++. +.+|++.
T Consensus 231 ~~l~s~~~dg~--i~iwd~~ 248 (351)
T 3f3f_A 231 QLIATGCKDGR--IRIFKIT 248 (351)
T ss_dssp EEEEEEETTSC--EEEEEEE
T ss_pred eEEEEEcCCCe--EEEEeCC
Confidence 57777777764 5667765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=84.17 E-value=8.8 Score=34.20 Aligned_cols=39 Identities=21% Similarity=0.374 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.+.++.+.++...++. -..|+.+.|+|.|+.++..++..
T Consensus 56 G~~~~~~~i~~~~~~C--P~tkiVL~GYSQGA~V~~~~l~~ 94 (254)
T 3hc7_A 56 GVAELILQIELKLDAD--PYADFAMAGYSQGAIVVGQVLKH 94 (254)
T ss_dssp HHHHHHHHHHHHHHHC--TTCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC--CCCeEEEEeeCchHHHHHHHHHh
Confidence 3455555555544432 23699999999999998887654
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=84.01 E-value=2.7 Score=43.98 Aligned_cols=110 Identities=5% Similarity=0.042 Sum_probs=64.6
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-c-ceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-V-GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
+++++|++++|+++.+. ....|+++++++.. .+.+.... . -....|+|++++||+.... ..+|+++++++ .
T Consensus 500 giavDp~~g~ly~td~~-~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~----~~~I~~~d~dG-~ 572 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNG-G 572 (699)
T ss_dssp CEECCSSSSCCEECCCS-SSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETT----TTEEEEECSSS-S
T ss_pred eEEEccCCCcEEEcccC-CCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecC----CCeEEEEccCC-C
Confidence 45788888877765432 23678998887654 33332211 1 1124589999999987643 35899999876 3
Q ss_pred CceEEEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 114 ETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 114 ~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
..+.++... ......++.++.+++|++.... .++..++.
T Consensus 573 ~~~~~~~~~~~~~~P~glavd~~~lywtd~~~--~~V~~~d~ 612 (699)
T 1n7d_A 573 NRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANR 612 (699)
T ss_dssp CCEEECCCSSSCSSCCCCEEETTEEEEECSTT--TCEEEEET
T ss_pred ceEEEEecCCcCCCceEeEEECCEEEEEeCCC--CeEEEEEc
Confidence 233233321 1112346677788777766443 34666664
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=83.89 E-value=1.5 Score=40.74 Aligned_cols=52 Identities=15% Similarity=-0.004 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh---CCCceeEEEecCCc
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVPF 376 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~---~p~~~~a~v~~~~~ 376 (505)
..++...++.+.++. ...+|.|.|||+||.++..++.. ....+.+.....|.
T Consensus 119 ~~~l~~~l~~~~~~~--p~~~i~vtGHSLGGAlA~L~a~~l~~~~~~v~~~TFG~Pr 173 (319)
T 3ngm_A 119 SAAATAAVAKARKAN--PSFKVVSVGHSLGGAVATLAGANLRIGGTPLDIYTYGSPR 173 (319)
T ss_dssp HHHHHHHHHHHHHSS--TTCEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEESCCC
T ss_pred HHHHHHHHHHHHhhC--CCCceEEeecCHHHHHHHHHHHHHHhcCCCceeeecCCCC
Confidence 345566666666542 13589999999999988776653 22245555555553
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=83.65 E-value=23 Score=32.34 Aligned_cols=99 Identities=10% Similarity=0.082 Sum_probs=57.6
Q ss_pred EEEEEeC-CCcEEEEEecc---------------ccceEEEEEeCCCCCceeeeeccccc-eeEEeeeeCCEEEEEEcCC
Q 010654 35 LGLQASE-SKKFLFIASES---------------KITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSD 97 (505)
Q Consensus 35 ~~~~~Sp-Dg~~i~~~~~~---------------~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~ 97 (505)
-+....+ ||+. ++.... .....||++|.+++. .+.+...... ....+++||+.||+....
T Consensus 129 ~~i~~d~~~G~l-~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~~~~~~~~~~p~gia~~~dg~~lyv~d~~- 205 (322)
T 2fp8_A 129 YAVTVDQRTGIV-YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-TTLLLKELHVPGGAEVSADSSFVLVAEFL- 205 (322)
T ss_dssp EEEEECTTTCCE-EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-EEEEEEEESCCCEEEECTTSSEEEEEEGG-
T ss_pred ceEEEecCCCEE-EEECCcccccccccceehcccCCCceEEEEeCCCCE-EEEeccCCccCcceEECCCCCEEEEEeCC-
Confidence 3577889 8864 444322 113679999988775 5544322111 123589999988887643
Q ss_pred CCCCceEEEeeCCCC--CCceEEEcCCCCceeeEEEEeCCE-EEEEEe
Q 010654 98 ELFNSELLACPVDNT--SETTVLIPHRESVKLQDIQLFIDH-LAVYER 142 (505)
Q Consensus 98 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~ 142 (505)
..+|+++++++. +..+ .+... .. ..++..+.++ ++++..
T Consensus 206 ---~~~I~~~~~~~~~~~~~~-~~~~~-~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 206 ---SHQIVKYWLEGPKKGTAE-VLVKI-PN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp ---GTEEEEEESSSTTTTCEE-EEEEC-SS-EEEEEECTTSCEEEEEE
T ss_pred ---CCeEEEEECCCCcCCccc-eEEeC-CC-CCCeEECCCCCEEEEec
Confidence 248999998752 1222 23222 22 5677777764 554443
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=83.64 E-value=29 Score=32.48 Aligned_cols=101 Identities=14% Similarity=0.058 Sum_probs=54.1
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee------ccccce-eEEeeee---CCEEEEEEcCCC-CCCc
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT------PRVVGV-DTAASHR---GNHFFITRRSDE-LFNS 102 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~------~~~~~~-~~~~s~d---g~~l~~~~~~~~-~~~~ 102 (505)
-.+++++|||+ |+++... ..|++++ ++. .+.+. ....+. ...++|| +++||+...... ....
T Consensus 33 P~~ia~~pdG~-l~V~e~~---g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 33 PWALAFLPDGG-MLIAERP---GRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp EEEEEECTTSC-EEEEETT---TEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred ceEEEEcCCCe-EEEEeCC---CeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 34778999998 4444332 6799998 343 33221 111121 1348888 778888765321 1125
Q ss_pred eEEEeeCCCCC--CceEEEc-----CCCCceeeEEEEeCCE-EEEEE
Q 010654 103 ELLACPVDNTS--ETTVLIP-----HRESVKLQDIQLFIDH-LAVYE 141 (505)
Q Consensus 103 ~l~~~~~~~~~--~~~~~~~-----~~~~~~i~~~~~~~d~-l~~~~ 141 (505)
+|+++++.+.. ..+.++. .........+.+.+|+ ||++.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 89999876411 1222332 1112234577887775 44443
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=83.56 E-value=1.5 Score=39.41 Aligned_cols=37 Identities=24% Similarity=0.222 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.++...++.+.++. ...+|.|.|||+||.++..++..
T Consensus 108 ~~~~~~l~~~~~~~--p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 108 DTIITEVKALIAKY--PDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHS--TTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCCeEEEeccCHHHHHHHHHHHH
Confidence 45556666665542 12589999999999998777654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=83.26 E-value=27 Score=31.89 Aligned_cols=112 Identities=13% Similarity=0.150 Sum_probs=60.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeecccccee-EEeeeeCCEEEEEEcCCC------CCCceEEE
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TAASHRGNHFFITRRSDE------LFNSELLA 106 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~------~~~~~l~~ 106 (505)
+++++|||+.|++... ....|+++++++.. ..+.+.. ..+.. ..++++|+ ||+...... ....+|++
T Consensus 189 gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~ 264 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIK 264 (322)
T ss_dssp EEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEE
T ss_pred ceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEE
Confidence 5789999998776643 24679999988642 1333322 11211 23777775 665543210 11357888
Q ss_pred eeCCCCCCceEEEcCCC---CceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 107 CPVDNTSETTVLIPHRE---SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~~---~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
++.++ ...-.+.... ...+..+...++.|++....+ ..+..++++
T Consensus 265 ~d~~G--~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~--~~i~~~~~~ 312 (322)
T 2fp8_A 265 FDEFG--NILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFH--GSVGILVYD 312 (322)
T ss_dssp ECTTS--CEEEEEECCTTTTTSCCCEEEEETTEEEEECSSC--SEEEEEEC-
T ss_pred ECCCC--CEEEEEECCCCCccccceEEEEeCCEEEEeecCC--CceEEEecc
Confidence 88754 2211232211 123445555566777665443 346666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 505 | ||||
| d1qfma2 | 280 | c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-term | 7e-42 | |
| d1qfma1 | 430 | b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-termin | 2e-19 | |
| d1xfda2 | 258 | c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-li | 1e-18 | |
| d2bgra2 | 258 | c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26 | 6e-15 | |
| d1mpxa2 | 381 | c.69.1.21 (A:24-404) Alpha-amino acid ester hydrol | 2e-14 | |
| d1sfra_ | 288 | c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculo | 3e-14 | |
| d2hu7a2 | 260 | c.69.1.33 (A:322-581) Acylamino-acid-releasing enz | 1e-13 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 1e-13 | |
| d2b9va2 | 385 | c.69.1.21 (A:50-434) Alpha-amino acid ester hydrol | 2e-12 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 6e-12 | |
| d1dqza_ | 280 | c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo | 2e-11 | |
| d1r88a_ | 267 | c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu | 8e-11 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 6e-10 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 2e-06 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 0.001 | |
| d3c8da2 | 246 | c.69.1.2 (A:151-396) Enterochelin esterase, cataly | 0.002 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 0.003 |
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 149 bits (375), Expect = 7e-42
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 8/277 (2%)
Query: 227 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRL 286
D ++Y T + + + DGT+IP+ IV++K + KLDGS P LYGYG + I P ++ SRL
Sbjct: 1 DASDYQTVQIFYPSKDGTKIPMFIVHKKGI-KLDGSHPAFLYGYGGFNISITPNYSVSRL 59
Query: 287 SLLDRG-FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 345
+ + A+A IRGGGE G W++ G K+N F DF AEYLIK Y + ++L
Sbjct: 60 IFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLT 119
Query: 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 405
I G S GGLL+ N RPDLF +A V +D+L T ++ E
Sbjct: 120 INGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFE 179
Query: 406 FYFYMKSYSPVDNVKAQN--YPHILVTAGLNDPRVMYSEPAKFVAKLRE----MKTDDNI 459
+ V +A + YP +L+ +D RV+ KF+A L+ + +N
Sbjct: 180 WLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNP 239
Query: 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496
LL + AGH + + + E + + F+ R L++
Sbjct: 240 LLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 276
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 430 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.1 bits (217), Expect = 2e-19
Identities = 32/239 (13%), Positives = 72/239 (30%), Gaps = 27/239 (11%)
Query: 2 DEILRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESKITRF--V 58
K + H L DQS DI D+ + G + S+ +++ ++ +
Sbjct: 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRL 261
Query: 59 FYLDVSKPEEL-------RVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLA--CPV 109
+Y D+ + L G ++ G F +
Sbjct: 262 WYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321
Query: 110 DNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS 169
+ + ++ H + V + + L + + + L G
Sbjct: 322 EESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH----------DLATGAL 371
Query: 170 VE-FIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG---ISVLKKIETVLG 224
++ F V S+ + + ++S +P +Y D+ V +++ V G
Sbjct: 372 LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT-VKG 429
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.7 bits (205), Expect = 1e-18
Identities = 38/260 (14%), Positives = 79/260 (30%), Gaps = 15/260 (5%)
Query: 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYG---SYEICNDPAFNSSRLSLLDRGFIFAI 297
D +P+ I+ PLLL G S + + + + G +
Sbjct: 10 IDDYNLPMQILKPATFTD-TTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 68
Query: 298 AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357
RG G G + + D + ++K Y + ++ + G+ GG L
Sbjct: 69 CDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLST 128
Query: 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417
+L + + + +T +E Y K
Sbjct: 129 YILPAKGENQGQTFTCGSALSPITDFKLYASA--FSERYLGLHGLDNRAYEMTKVA---H 183
Query: 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH-FSKSGR 476
V A L+ D ++ + A+ + +L K + ++ ++ H F+ S
Sbjct: 184 RVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYP---DESHYFTSSSL 240
Query: 477 FERLREAAFTYTFLMRALSM 496
+ L + F + +
Sbjct: 241 KQHLYRS--IINFFVECFRI 258
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 72.5 bits (176), Expect = 6e-15
Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 17/268 (6%)
Query: 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYG---SYEICNDPAFNSSRLSLL 289
+++ + T+ ++ + K PLLL Y S + N +
Sbjct: 3 SKKLDFIILNETKFWYQMILPPHFDK-SKKYPLLLDVYAGPCSQKADTVFRLNWATYLAS 61
Query: 290 DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGR 349
I A RG G G + D I A K + +++ I G
Sbjct: 62 TENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGW 121
Query: 350 SAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFY 409
S GG + VL +FK +A P + + G P E+ +
Sbjct: 122 SYGGYVTSMVLGSGSGVFKCGIAVAP-------VSRWEYYDSVYTERYMGLPTPEDNLDH 174
Query: 410 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469
++ + + + L+ G D V + + A+ L ++ D + +
Sbjct: 175 YRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYT---DED 231
Query: 470 H-FSKSGRFERLREAAFTYTFLMRALSM 496
H + S + + F+ + S+
Sbjct: 232 HGIASSTAHQHIYTH--MSHFIKQCFSL 257
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Score = 72.5 bits (176), Expect = 2e-14
Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 23/246 (9%)
Query: 227 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLL----YGYGSYEICNDPAFN 282
+N+Y DG ++ IV K + P++L Y
Sbjct: 18 ASNDYIKREVMIPMRDGVKLHTVIVLPKG----AKNAPIVLTRTPYDASGRTERLASPHM 73
Query: 283 SSRLS-----LLDRGFIFAIAQIRGGGELGRQWY-----ENGKFLKKKNTFTDFIACAEY 332
LS ++ G+I +RG + + + TD ++
Sbjct: 74 KDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDW 133
Query: 333 LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392
L+KN + K+ + G S G + L K AV P +D
Sbjct: 134 LVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID----GWMGDDWFNY 189
Query: 393 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLND-PRVMYSEPAKFVAKLR 451
+ + + + + +Y + L D + E + KL
Sbjct: 190 GAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLT 249
Query: 452 EMKTDD 457
E D
Sbjct: 250 EHAAYD 255
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 71.2 bits (173), Expect = 3e-14
Identities = 35/212 (16%), Positives = 57/212 (26%), Gaps = 16/212 (7%)
Query: 237 WASASDGTQIPICIVYRKNLVKLDGSDPLL--LYGYGSYEICNDPAFNSSRLSLLDRGFI 294
S S G I + + P L L G + + + N+ D+ +
Sbjct: 14 VPSPSMGRDIKVQFQSG------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGL 67
Query: 295 FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAE----YLIKNCYCTKEKLCIEGRS 350
+ + G WY+ T+ +L N + + G S
Sbjct: 68 SVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLS 127
Query: 351 AGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE--WGDPWKEEFYF 408
+ P F A A +D M I L + D W +
Sbjct: 128 MAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDP 187
Query: 409 YMKSYSPVDNVK--AQNYPHILVTAGLNDPRV 438
+ P+ NV N + V G P
Sbjct: 188 AWQRNDPLLNVGKLIANNTRVWVYCGNGKPSD 219
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Score = 68.8 bits (166), Expect = 1e-13
Identities = 36/270 (13%), Positives = 81/270 (30%), Gaps = 15/270 (5%)
Query: 225 GFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS 284
+ + W + DG+++P ++ P ++ +G + ++++
Sbjct: 4 DLRRSIAGSRLVWVESFDGSRVPTYVLESGR---APTPGPTVVLVHGGPFAEDSDSWDTF 60
Query: 285 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 344
SL GF + RG G +W D A A + ++ ++ +
Sbjct: 61 AASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYI 120
Query: 345 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKE 404
+ K + + L+ A + + +
Sbjct: 121 MGYSYGGYM-------TLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTG 173
Query: 405 EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464
M+S SP+++V P L+ ND R + + +L +
Sbjct: 174 GSREIMRSRSPINHVDRIKEPLALIHPQ-NDSRTPLKPLLRLMGELLARGKTFEAHIIP- 231
Query: 465 ELGAGHFSKSGRFERLREAAFTYTFLMRAL 494
AGH + + + ++ FL
Sbjct: 232 --DAGH-AINTMEDAVKILLPAVFFLATQR 258
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 69.4 bits (168), Expect = 1e-13
Identities = 44/310 (14%), Positives = 86/310 (27%), Gaps = 35/310 (11%)
Query: 195 YSSLRTPPSVYDYDMDMGISVLKKI----ETVLGGFDTNNYFTERKWASASDGTQIPICI 250
Y +T P + + + L K+ + + + R + +I
Sbjct: 14 YKPEKTAPKDFSEFWKLSLEELAKVQAEPDLQPVDYPADGVKVYRLTYKSFGNARITGWY 73
Query: 251 VYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310
+G P ++ +G + ++ G+ +RG
Sbjct: 74 AVPDK----EGPHPAIVKYHGYNA--SYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTS 127
Query: 311 YENGKF--------------LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLI 356
+ + D + E + + ++ + G S GG L
Sbjct: 128 ISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLT 187
Query: 357 GAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE----EWGDPWKEEFYFYMKS 412
A + KAAVA P++ +D + E G P E S
Sbjct: 188 IAAAALSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLS 246
Query: 413 YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472
Y + N+ + +L++ GL D S L K + +++ GH
Sbjct: 247 YFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKE---LKVYR---YFGHEY 300
Query: 473 KSGRFERLRE 482
Sbjct: 301 IPAFQTEKLA 310
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} Length = 385 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Score = 66.3 bits (160), Expect = 2e-12
Identities = 33/273 (12%), Positives = 62/273 (22%), Gaps = 35/273 (12%)
Query: 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLL----YGYGSYEICNDPAFNSSR 285
+Y DG ++ ++ K + P+LL Y A
Sbjct: 25 DYIKREVMVPMRDGVKLY-TVIVIP---KNARNAPILLTRTPYNAKGRANRVPNALTMRE 80
Query: 286 LS------LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF-----TDFIACAEYLI 334
+ ++ G+I IRG + N TD ++L+
Sbjct: 81 VLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLV 140
Query: 335 KNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD---------------- 378
N + ++ + G S G + L K A P VD
Sbjct: 141 HNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWMGDDWFHYGAFRQG 200
Query: 379 VLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRV 438
+ D + S + +
Sbjct: 201 AFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYD 260
Query: 439 MYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471
+ + L + K +L +
Sbjct: 261 AFWQGQALDKILAQRKPTVPMLWEQGLWDQEDM 293
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 64.3 bits (155), Expect = 6e-12
Identities = 54/299 (18%), Positives = 87/299 (29%), Gaps = 42/299 (14%)
Query: 215 VLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE 274
V +++E+ L + S G +I ++ K + P ++ G
Sbjct: 42 VFERMESHLKTVEA-----YDVTFSGYRGQRIKGWLLVPKLE---EEKLPCVVQYIGY-- 91
Query: 275 ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG-------------------- 314
F L G+I + RG G +
Sbjct: 92 -NGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILD 150
Query: 315 -KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373
+ + FTD + E +E++ I G S GG + AV + KA +
Sbjct: 151 PRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK-AKALLCD 209
Query: 374 VPFVDVLTTMLDPTIPLTTAEWEEW--GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTA 431
VPF+ + AE + KEE F SY N A+ L +
Sbjct: 210 VPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSV 269
Query: 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 490
GL D S K I ++ H G F+ + + F
Sbjct: 270 GLMDNICPPSTVFAAYNYYAGPKE---IRIYP---YNNH-EGGGSFQAVEQVKFLKKLF 321
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 62.2 bits (150), Expect = 2e-11
Identities = 34/210 (16%), Positives = 55/210 (26%), Gaps = 18/210 (8%)
Query: 239 SASDGTQIPICIVYRKNLVKLDGSDPL--LLYGYGSYEICNDPAFNSSRLSLLDRGFIFA 296
SAS G I + G LL G + + N N+ + +
Sbjct: 13 SASMGRDIKVQF--------QGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSV 64
Query: 297 IAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLI----KNCYCTKEKLCIEGRSAG 352
I + G WY+ + + T+ + N + G S
Sbjct: 65 IMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMS 124
Query: 353 GLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE--WGDPWKEEFYFYM 410
G + P F A + F++ + I L + W
Sbjct: 125 GGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAW 184
Query: 411 KSYSPVDNVK--AQNYPHILVTAGLNDPRV 438
K P+ + N I V G P
Sbjct: 185 KRNDPMVQIPRLVANNTRIWVYCGNGTPSD 214
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 60.3 bits (145), Expect = 8e-11
Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 21/208 (10%)
Query: 239 SASDGTQIPICIVYRKNLVKLDGSDP--LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFA 296
S S G IP+ L G LL + + ++ + ++ L I
Sbjct: 11 SPSMGRDIPVAF--------LAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISV 62
Query: 297 IAQIRGGGELGRQWYENGKFLKKKNTFTDFIA--CAEYLIKNCYCTKEKLCIEGRSAGGL 354
+A G + W ++G + F++ ++L N G + GG
Sbjct: 63 VAPAGGAYSMYTNWEQDGS-----KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGY 117
Query: 355 LIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE--EWGDPWKEEFYFYMKS 412
A+ PD F A + F+ T + I ++ + W K
Sbjct: 118 GAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKW 177
Query: 413 YSPVDNVK--AQNYPHILVTAGLNDPRV 438
+ P + AQN + V + N
Sbjct: 178 HDPWVHASLLAQNNTRVWVWSPTNPGAS 205
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 58.1 bits (140), Expect = 6e-10
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 401
+ + G ++GG + + D+F T+ + +
Sbjct: 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCA---RNQYYTSCMYNGYPSI 67
Query: 402 WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459
S + + +V I + G +D V + + A+L N+
Sbjct: 68 TTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANV 125
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 47.9 bits (112), Expect = 2e-06
Identities = 34/203 (16%), Positives = 61/203 (30%), Gaps = 15/203 (7%)
Query: 230 NYFTERK-WASASDGTQIPICIVYRKNLVKLDGSDPLLLY--GYGSYEICNDPAFNSSRL 286
NY DG ++ +YR DG P+LL Y +++ +++ L
Sbjct: 1 NYSVASNVMVPMRDGVRLA-VDLYRP---DADGPVPVLLVRNPYDKFDVFAWSTQSTNWL 56
Query: 287 SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCI 346
+ G+ I RG G+F+ + D ++++ +C + +
Sbjct: 57 EFVRDGYAVVIQDTRGLFASE------GEFVPHVDDEADAEDTLSWILEQAWCDG-NVGM 109
Query: 347 EGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-TMLDPTIPLTTAEWEEWGDPWKEE 405
G S G+ KA ++ D+ P L+ W
Sbjct: 110 FGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEALLGWSALIGTG 169
Query: 406 FYFYMKSYSPVDNVKAQNYPHIL 428
P D IL
Sbjct: 170 LITSRSDARPEDAADFVQLAAIL 192
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.3 bits (87), Expect = 0.001
Identities = 14/160 (8%), Positives = 36/160 (22%), Gaps = 19/160 (11%)
Query: 329 CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 388
+ + + G S G I +L D + A + L ++
Sbjct: 91 VSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVF 150
Query: 389 PLTTAEWE---------------EWGDPWKEEFYFYMKSYSPVDNVKAQNYPH-ILVTAG 432
L + + P + + +
Sbjct: 151 LLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHS 210
Query: 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472
+D + + ++ L++ + + L H
Sbjct: 211 YSDELLTLRQTNCLISCLQDYQLSFKLYLDD---LGLHND 247
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} Length = 246 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Score = 37.6 bits (86), Expect = 0.002
Identities = 29/225 (12%), Positives = 56/225 (24%), Gaps = 26/225 (11%)
Query: 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG 292
E W S + ++ V PL + G + + P + SL R
Sbjct: 16 KEIIWKSERLKNSRRV-WIFTTGDVT-AEERPLAVLLDGEFWAQSMPVW-PVLTSLTHRQ 72
Query: 293 FIFAIAQIRGGGELGRQWYENGKFLKKKNTF-TDFIACAEYLIKNCYCTKEKLCIEGRSA 351
+ + + +I ++ + G+S
Sbjct: 73 QLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSF 132
Query: 352 GGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMK 411
GGL P+ F ++ + W +E
Sbjct: 133 GGLSALYAGLHWPERFGCVLSQSG-----------------SYWWPHRGGQQEGVLLEKL 175
Query: 412 SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456
V I++ AG+ +P + A+L +K
Sbjct: 176 KAGEVSA----EGLRIVLEAGIREPMI-MRANQALYAQLHPIKES 215
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 37.6 bits (86), Expect = 0.003
Identities = 24/215 (11%), Positives = 42/215 (19%), Gaps = 56/215 (26%)
Query: 288 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY--------- 338
L RGF G A ++L
Sbjct: 132 FLTRGFASIYVAGVGTRSSDGFQTSGD-----YQQIYSMTAVIDWLNGRARAYTSRKKTH 186
Query: 339 -----CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---------- 383
K+ + G+S G + + + +A
Sbjct: 187 EIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPG 246
Query: 384 --------------------------LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417
+ AE D ++ + + +
Sbjct: 247 GFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLI 306
Query: 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 452
N +L+ GL D V + F L E
Sbjct: 307 NTDKVKAD-VLIVHGLQDWNVTPEQAYNFWKALPE 340
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 505 | |||
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 100.0 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 100.0 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 100.0 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 100.0 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.95 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.95 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.89 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.89 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.89 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.89 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.88 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.88 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.88 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.88 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.87 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.87 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.86 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.86 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.85 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.85 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.82 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.82 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.81 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.8 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.79 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.79 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.78 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.75 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.75 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.74 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.73 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.73 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.73 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.72 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.71 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.7 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.7 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.7 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.69 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 99.69 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.68 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.68 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.68 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.68 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.67 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.67 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.66 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.65 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.65 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.64 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.64 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.63 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.62 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.62 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.61 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.61 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.59 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.58 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.57 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.56 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.56 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.5 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.49 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.4 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.4 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.23 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.21 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.18 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.16 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.15 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.11 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.09 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 98.97 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 98.93 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 98.93 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.87 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.84 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 98.83 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.81 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.81 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.77 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 98.76 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.74 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.73 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.72 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.71 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.67 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 98.66 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.62 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.61 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.57 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.47 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.44 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.38 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.25 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.23 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.17 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 98.15 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 97.99 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 97.99 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 97.98 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.87 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 97.65 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 97.41 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 97.41 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 97.32 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 97.32 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.29 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 97.12 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 96.99 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 96.97 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.97 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 96.72 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 96.67 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 96.66 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 96.64 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 96.63 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 96.61 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 96.6 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 96.35 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 96.33 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 96.27 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 96.14 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.13 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 96.0 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.0 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 95.96 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.93 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 95.91 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 95.87 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 95.6 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 95.46 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 95.42 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 95.31 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 95.3 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 95.03 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 94.91 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 94.85 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 94.79 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 94.11 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 93.93 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 93.89 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 93.79 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 93.53 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 93.37 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 93.28 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 92.98 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 92.8 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 92.75 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 92.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 91.97 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 91.88 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 91.84 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 91.5 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 91.43 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 89.82 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 89.42 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 89.08 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 86.66 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 86.32 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 86.12 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 85.25 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 84.51 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 84.42 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 84.03 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 83.95 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 83.68 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 83.46 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 81.62 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 80.99 |
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=5.8e-36 Score=278.26 Aligned_cols=250 Identities=20% Similarity=0.234 Sum_probs=207.3
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
..++.++|++.||.+|++++++|++. .++.|+||++|||++.+....|....+.|+++||+|+.+|+||++++|..+
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~~---~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~ 86 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGRA---PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEW 86 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTS---CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHH
T ss_pred CceEEEEEECCCCCEEEEEEEeCCCC---CCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeecccccccc
Confidence 36788899999999999999999764 467899999999988777778888888999999999999999999999999
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
........+..+++|+.++++|+.+++ ++++++|+|+|+||++++.++..+|+.++++++.+|+.++......... .
T Consensus 87 ~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~-~ 163 (260)
T d2hu7a2 87 RLKIIGDPCGGELEDVSAAARWARESG--LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDA-A 163 (260)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHHTT--CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHHTCCH-H
T ss_pred ccccccccchhhhhhhccccccccccc--ccceeeccccccccccccchhccCCcccccccccccchhhhhhhccccc-c
Confidence 887777778889999999999999975 6789999999999999999999999999999999999987665422110 0
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
...+...-...+.+ .+...+|+.+++++++| +|++||+.|.+||+.++.+++++|+++++++++++|+ +++|
T Consensus 164 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P-~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~---g~~H 235 (260)
T d2hu7a2 164 -FRNFIEQLTGGSRE---IMRSRSPINHVDRIKEP-LALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIP---DAGH 235 (260)
T ss_dssp -HHHHHHHHHCSCHH---HHHHTCGGGCGGGCCSC-EEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEET---TCCS
T ss_pred -cccccccccccccc---cccccchhhcccccCCC-ceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEEC---cCCC
Confidence 00111000112333 44778999999999998 9999999999999999999999999999999999998 8899
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 471 FSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++.. .....+.+..+++||.+||+
T Consensus 236 ~~~~-~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 236 AINT-MEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp SCCB-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-hHhHHHHHHHHHHHHHHHhc
Confidence 8653 23344555578999999985
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=2.9e-35 Score=273.19 Aligned_cols=253 Identities=17% Similarity=0.125 Sum_probs=203.9
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC---CCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND---PAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
+.|.+.+...||.++.++|++|+++ ++++++|+||++|||++.... ..+......++++||+|+.+|+||+++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~-~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~ 80 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHF-DKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD 80 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTC-CTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred CceeEEEEEeCCcEEEEEEEECCCc-CCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcch
Confidence 5688999999999999999999998 888999999999998655332 223344456788999999999999999999
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCC
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
.|.......++..++.|+.++++++.+++.+|+++|+++|+|+||.+++.++..+|+++.++++..+.........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 156 (258)
T d2bgra2 81 KIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS---- 156 (258)
T ss_dssp HHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH----
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccc----
Confidence 9988888888888999999999999999999999999999999999999999999999999999888765432110
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
.......+.+......+.....+|+..+.+++.+|+|++||++|++||+.++++++++|+++|+++++++|+ ++
T Consensus 157 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~---g~ 230 (258)
T d2bgra2 157 ---VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYT---DE 230 (258)
T ss_dssp ---HHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEET---TC
T ss_pred ---cccchhcccccchhhHHHhhcccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEEC---CC
Confidence 000111233211112234477899999988754459999999999999999999999999999999999999 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 469 GHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+|++.. .....+....+.+||+++|..
T Consensus 231 ~H~~~~-~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 231 DHGIAS-STAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp CTTCCS-HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCC-CccHHHHHHHHHHHHHHHhcC
Confidence 998643 233344456789999999975
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-35 Score=271.71 Aligned_cols=241 Identities=16% Similarity=0.216 Sum_probs=188.3
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCC--chhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~--~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
.||.+|++++++|+++ +.++++|+||++|||++... ...| ....+.|+++||+|+.+|+||++++|.+|.......
T Consensus 10 ~dg~~l~~~l~~P~~~-~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~ 88 (258)
T d1xfda2 10 IDDYNLPMQILKPATF-TDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR 88 (258)
T ss_dssp ETTEEECCBEEBCSSC-CSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTC
T ss_pred eCCeEEEEEEEECCCc-CCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhcc
Confidence 4999999999999998 77888999999999876432 2333 334567899999999999999999999998877777
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhhhhccCCCCCCCcc
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTMLDPTIPLTTA 393 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~~~~~~~~~~~ 393 (505)
.+..++.|+.++++++++++.+|++||+|+|+|+||++++.++...++ .+++.+...|+..+.... ...
T Consensus 89 ~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 161 (258)
T d1xfda2 89 LGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA-------SAF 161 (258)
T ss_dssp TTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB-------HHH
T ss_pred chhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccc-------ccc
Confidence 788899999999999999999999999999999999999998876554 577777777765432110 000
Q ss_pred cccccCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 394 EWEEWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 394 ~~~~~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
.....+.+ .+++.+ ...++..++.++..+|+|++||+.|.+||++++.+++++|+++++++++++|| +++|++
T Consensus 162 ~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p---~~~H~~ 235 (258)
T d1xfda2 162 SERYLGLHGLDNRAY---EMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYP---DESHYF 235 (258)
T ss_dssp HHHHHCCCSSCCSST---TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEET---TCCSSC
T ss_pred ccccccccccchHHh---hccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEEC---CCCCCC
Confidence 11112222 222222 45678888888755569999999999999999999999999999999999999 889987
Q ss_pred CCChHHHHHHHHHHHHHHHHhhCC
Q 010654 473 KSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 473 ~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
... .........+++||.++|++
T Consensus 236 ~~~-~~~~~~~~~~~~f~~~~~~~ 258 (258)
T d1xfda2 236 TSS-SLKQHLYRSIINFFVECFRI 258 (258)
T ss_dssp CCH-HHHHHHHHHHHHHHTTTTCC
T ss_pred CCC-cCHHHHHHHHHHHHHHhhCC
Confidence 542 23344456789999999874
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.9e-32 Score=256.85 Aligned_cols=266 Identities=35% Similarity=0.565 Sum_probs=209.2
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhH-HHHHHCCcEEEEEcccCCCCC
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGEL 306 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~ 306 (505)
+..+++|+|+|++.||.+|+++|++|++. ++++++|+||++|||++.+....+.... ..++..|++++..++++...+
T Consensus 2 ~~~y~~e~v~~~s~DG~~i~~~l~~P~~~-~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T d1qfma2 2 ASDYQTVQIFYPSKDGTKIPMFIVHKKGI-KLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEY 80 (280)
T ss_dssp GGGEEEEEEEEECTTSCEEEEEEEEETTC-CCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTT
T ss_pred cccCEEEEEEEECCCCCEEEEEEEEcCCC-CCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeecccccccccc
Confidence 34578899999999999999999999998 7889999999999999988777665544 455667899999999988888
Q ss_pred chhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC
Q 010654 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP 386 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 386 (505)
+..+..............+...++.+...+...+..+++++|+|.||+++..++...++++++++...++.++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (280)
T d1qfma2 81 GETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT 160 (280)
T ss_dssp HHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST
T ss_pred chhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhcccc
Confidence 87777665666666777888888888888888889999999999999999999999999999999999999876654322
Q ss_pred CCCCCcccccccCCCCCHHHHHHHHhCChhhcccC-----CCCCeEEEEccCCCCCCCCChHHHHHHHHHhc-------C
Q 010654 387 TIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA-----QNYPHILVTAGLNDPRVMYSEPAKFVAKLREM-------K 454 (505)
Q Consensus 387 ~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~-----~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~-------~ 454 (505)
..+. ...........+........+|..++.. ..+||+||+||+.|++||+.|+++|+++|+++ |
T Consensus 161 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~ 237 (280)
T d1qfma2 161 IGHA---WTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQN 237 (280)
T ss_dssp TGGG---GHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCC
T ss_pred cccc---ceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCC
Confidence 1110 0011122223333344455566554332 25678999999999999999999999999654 7
Q ss_pred CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCCC
Q 010654 455 TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 455 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 500 (505)
+++++++|+ ++||++.....+.++..+++++||.++|+....|
T Consensus 238 ~~~~l~~~~---~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~~~~ 280 (280)
T d1qfma2 238 NPLLIHVDT---KAGHGAGKPTAKVIEEVSDMFAFIARCLNIDWIP 280 (280)
T ss_dssp SCEEEEEES---SCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CcEEEEEeC---cCCCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 788899998 8899886665666777788999999999987643
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=5.8e-28 Score=231.06 Aligned_cols=249 Identities=18% Similarity=0.103 Sum_probs=179.3
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
...+..+.++|++.||.+|+++++.|++. .++.|+||++||++.... +......|+++||+|+.+|+||+|.++
T Consensus 50 ~~~~~~~~v~~~s~dG~~l~~~l~~P~~~---~~~~P~Vv~~hG~~~~~~---~~~~~~~~a~~G~~v~~~D~rG~G~s~ 123 (322)
T d1vlqa_ 50 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE---EEKLPCVVQYIGYNGGRG---FPHDWLFWPSMGYICFVMDTRGQGSGW 123 (322)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS---CSSEEEEEECCCTTCCCC---CGGGGCHHHHTTCEEEEECCTTCCCSS
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEeccCC---CCCccEEEEecCCCCCcC---cHHHHHHHHhCCCEEEEeeccccCCCC
Confidence 34567889999999999999999999865 467899999999865433 233446899999999999999999775
Q ss_pred hhHHHccccc---------------------CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc
Q 010654 308 RQWYENGKFL---------------------KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL 366 (505)
Q Consensus 308 ~~~~~~~~~~---------------------~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~ 366 (505)
.......... .....+.|+.++++++..++.+|++|++++|+|+||++++.+++..+ +
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~ 202 (322)
T d1vlqa_ 124 LKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-K 202 (322)
T ss_dssp SCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-S
T ss_pred CCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-C
Confidence 5422111000 00124689999999999999999999999999999999999988765 6
Q ss_pred eeEEEecCCchhhhhhccCCCCCCCccccccc--CCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChH
Q 010654 367 FKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW--GDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP 443 (505)
Q Consensus 367 ~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~--g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~ 443 (505)
++++++.+|......................+ ..+ ..+...+.+..+||..++.++++| +|++||++|.+||++++
T Consensus 203 ~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P-~Lv~~G~~D~~vp~~~~ 281 (322)
T d1vlqa_ 203 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIP-ALFSVGLMDNICPPSTV 281 (322)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSC-EEEEEETTCSSSCHHHH
T ss_pred ccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCC-EEEEEeCCCCCcCHHHH
Confidence 88888887765433222110110000111111 122 334445566778999999999998 99999999999999998
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 444 AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 444 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.++++++ +.++++++|| +++|... ..... ...++||.++|.
T Consensus 282 ~~~~~~~---~~~~~l~~~p---~~~H~~~--~~~~~---~~~~~~l~~~l~ 322 (322)
T d1vlqa_ 282 FAAYNYY---AGPKEIRIYP---YNNHEGG--GSFQA---VEQVKFLKKLFE 322 (322)
T ss_dssp HHHHHHC---CSSEEEEEET---TCCTTTT--HHHHH---HHHHHHHHHHHC
T ss_pred HHHHHHC---CCCeEEEEEC---CCCCCCc--cccCH---HHHHHHHHHHhC
Confidence 8777665 5678899998 7899653 22211 235789999874
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.95 E-value=6.1e-27 Score=223.12 Aligned_cols=249 Identities=15% Similarity=0.105 Sum_probs=179.6
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
...+..+.++|++.||.+|+++++.|++. ++.|+||++||+.+... .+......|+++||+|+.+|+||+|.+.
T Consensus 51 ~~~~~~~~v~~~~~dg~~i~~~l~~P~~~----~~~P~vv~~HG~~~~~~--~~~~~~~~la~~Gy~vi~~D~rG~G~s~ 124 (318)
T d1l7aa_ 51 ADGVKVYRLTYKSFGNARITGWYAVPDKE----GPHPAIVKYHGYNASYD--GEIHEMVNWALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp CSSEEEEEEEEEEGGGEEEEEEEEEESSC----SCEEEEEEECCTTCCSG--GGHHHHHHHHHTTCEEEEECCTTTSSSC
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEecCCC----CCceEEEEecCCCCCcc--chHHHHHHHHHCCCEEEEEeeCCCCCCC
Confidence 34678899999999999999999999865 67899999999876543 3555667899999999999999999876
Q ss_pred hhHHHcccccC--------------CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 308 RQWYENGKFLK--------------KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 308 ~~~~~~~~~~~--------------~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
..+........ ....+.|...+++++..++.+|+++++++|+|+||.+++.++...++ ++++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~ 203 (318)
T d1l7aa_ 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEE
T ss_pred CCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEe
Confidence 54432111111 01346888999999999999999999999999999999999998764 5666666
Q ss_pred CCch-hhhhhccC-CCCCCCcc-cc-cccCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHH
Q 010654 374 VPFV-DVLTTMLD-PTIPLTTA-EW-EEWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVA 448 (505)
Q Consensus 374 ~~~~-d~~~~~~~-~~~~~~~~-~~-~~~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~ 448 (505)
.|.. ++...... ...+.... .+ ...+.. ...+.+......++...++++++| +|++||++|..||++++.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~Lii~G~~D~~vp~~~~~~~~~ 282 (318)
T d1l7aa_ 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVP-VLMSIGLIDKVTPPSTVFAAYN 282 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSC-EEEEEETTCSSSCHHHHHHHHH
T ss_pred ccccccHHHHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCC-EEEEEECCCCCcCHHHHHHHHH
Confidence 5543 32222111 01111100 01 111222 223334445667888889999998 9999999999999999999988
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+| +.+.++++|+ ++||... .+. ..++++||+++|+.
T Consensus 283 ~l---~~~~~l~~~~---~~gH~~~---~~~---~~~~~~fl~~~LkG 318 (318)
T d1l7aa_ 283 HL---ETKKELKVYR---YFGHEYI---PAF---QTEKLAFFKQILKG 318 (318)
T ss_dssp HC---CSSEEEEEET---TCCSSCC---HHH---HHHHHHHHHHHHCC
T ss_pred Hc---CCCcEEEEEC---CCCCCCc---HHH---HHHHHHHHHHhCCC
Confidence 76 4467888998 7899653 222 23478999999963
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=5.5e-26 Score=219.90 Aligned_cols=241 Identities=20% Similarity=0.134 Sum_probs=169.9
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
....|++.++. ||..|+++++.|++. ++.|+||++||..+... .+....+.|+++||+|+.+|+||+|+....
T Consensus 103 ~~~~e~v~ip~-dg~~l~g~l~~P~~~----~~~P~Vi~~hG~~~~~e--~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~ 175 (360)
T d2jbwa1 103 SPPAERHELVV-DGIPMPVYVRIPEGP----GPHPAVIMLGGLESTKE--ESFQMENLVLDRGMATATFDGPGQGEMFEY 175 (360)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSSS----CCEEEEEEECCSSCCTT--TTHHHHHHHHHTTCEEEEECCTTSGGGTTT
T ss_pred CCCeEEeecCc-CCcccceEEEecCCC----CCceEEEEeCCCCccHH--HHHHHHHHHHhcCCEEEEEccccccccCcc
Confidence 45678888885 789999998888654 67899999999755432 344556789999999999999998865432
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 389 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 389 (505)
. ........++.++++++..+..+|++||+|+|+|+||++++.++..+| +++++|+..|+.++..... ..+
T Consensus 176 ~------~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~--~~~ 246 (360)
T d2jbwa1 176 K------RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL--ETP 246 (360)
T ss_dssp C------CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG--SCH
T ss_pred c------cccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhh--hhh
Confidence 1 112233456677899999999999999999999999999999999877 6899999999877533211 111
Q ss_pred CCccccc-ccCCCCCHHH-HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 390 LTTAEWE-EWGDPWKEEF-YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 390 ~~~~~~~-~~g~~~~~~~-~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
.....+. ..+.....+. ......++....+.++++| +|++||++|. ||+.++.++++++.... .++++++ +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~Lii~G~~D~-vp~~~~~~l~~~~~~~~--~~l~~~~---~ 319 (360)
T d2jbwa1 247 LTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACP-TYILHGVHDE-VPLSFVDTVLELVPAEH--LNLVVEK---D 319 (360)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSC-EEEEEETTSS-SCTHHHHHHHHHSCGGG--EEEEEET---T
T ss_pred hhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCC-EEEEEeCCCC-cCHHHHHHHHHhcCCCC--eEEEEEC---C
Confidence 1111111 1122222221 2233456666778899998 9999999997 79999999999886543 3456665 7
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
++|..... ... ....+.+||.++|..
T Consensus 320 g~H~~~~~-~~~--~~~~i~dWl~~~L~~ 345 (360)
T d2jbwa1 320 GDHCCHNL-GIR--PRLEMADWLYDVLVA 345 (360)
T ss_dssp CCGGGGGG-TTH--HHHHHHHHHHHHHTS
T ss_pred CCcCCCcC-hHH--HHHHHHHHHHHHhcc
Confidence 78854322 222 233578999999954
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.89 E-value=9.3e-23 Score=196.66 Aligned_cols=244 Identities=16% Similarity=0.212 Sum_probs=171.8
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCC--cCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE--ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~--~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
.+.|.++.+||.+|.+.+++|++. ++.|+||..||... ......+....+.|+++||+|+.+|.||+|+++..+
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~~~----~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~ 80 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPDAD----GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEF 80 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCS----SCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred EeCeEEECCCCCEEEEEEEEcCCC----CCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCcc
Confidence 466899999999999999999754 68999999987322 111122334457899999999999999999988765
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc-CCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML-DPTIP 389 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-~~~~~ 389 (505)
. .......|..++++|+.++++.| .||+++|.||||++++.+|+..|..++|++..++..|+..... ...-.
T Consensus 81 ~------~~~~~~~d~~d~i~w~~~q~~~~-grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~~~~~~~~gg~ 153 (347)
T d1ju3a2 81 V------PHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGA 153 (347)
T ss_dssp C------TTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCC
T ss_pred c------cccchhhhHHHHHHHHHhhccCC-cceEeeeccccccchhhhhhcccccceeeeeccccchhhhhhhhhcCCc
Confidence 3 23345688999999999999987 6999999999999999999988989999999999887532110 00000
Q ss_pred CCcc---cc--------------------------------------------------------ccc-CCCCCHHHHHH
Q 010654 390 LTTA---EW--------------------------------------------------------EEW-GDPWKEEFYFY 409 (505)
Q Consensus 390 ~~~~---~~--------------------------------------------------------~~~-g~~~~~~~~~~ 409 (505)
+... .| ..+ ..|... ++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 230 (347)
T d1ju3a2 154 LSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDND---ES 230 (347)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTCCSCC---HH
T ss_pred cchhhHHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhcccch---hh
Confidence 0000 00 000 011111 23
Q ss_pred HHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC-----------hHH
Q 010654 410 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-----------RFE 478 (505)
Q Consensus 410 ~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~-----------~~~ 478 (505)
+...+|...+.++++| +|+++|..|..+ ..+.+++++++. +.+.++++.|. +|..... ...
T Consensus 231 w~~~~~~~~~~~i~vP-~L~i~G~~D~~~--~~~~~~~~~~~~-~~~~~liigpw----~H~~~~~~~~~~~~g~~~~~~ 302 (347)
T d1ju3a2 231 WQSISLFERLGGLATP-ALITAGWYDGFV--GESLRTFVAVKD-NADARLVVGPW----SHSNLTGRNADRKFGIAATYP 302 (347)
T ss_dssp HHTTCCHHHHTTCCCC-EEEEEEEECTTH--HHHHHHHHHHTT-TSCEEEEEEEE----ESSCCSSEETTEECCGGGSCC
T ss_pred hhcCCHHHHhhcCCCC-EEEeccccCCCc--chhHHHHHHhhc-cCCceEEEcCc----cccCcccccCCCCCCcccccc
Confidence 4567888889999998 999999999876 457888888875 55677888774 3422100 001
Q ss_pred HHHHHHHHHHHHHHhhCCCC
Q 010654 479 RLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 479 ~~~~~~~~~~fl~~~l~~~~ 498 (505)
..+.....++||+++|+...
T Consensus 303 ~~~~~~~~l~wfD~~LKg~~ 322 (347)
T d1ju3a2 303 IQEATTMHKAFFDRHLRGET 322 (347)
T ss_dssp HHHHHHHHHHHHHHHTSCCT
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 22334457999999997543
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.89 E-value=2.8e-22 Score=196.68 Aligned_cols=254 Identities=14% Similarity=0.077 Sum_probs=178.4
Q ss_pred CCCCCCceEEEEEEECC-----CCc--eeeEEEEEeCCccCCCCCCcEEEEEcC--C-----------------------
Q 010654 225 GFDTNNYFTERKWASAS-----DGT--QIPICIVYRKNLVKLDGSDPLLLYGYG--S----------------------- 272 (505)
Q Consensus 225 ~~~~~~~~~~~~~~~s~-----dG~--~i~~~l~~p~~~~~~~~~~P~iv~~hG--g----------------------- 272 (505)
.++...+..|.|++.+. ||+ +|.+.|++|++. +|.|+|+..+- .
T Consensus 15 ~~~~~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~~----~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (405)
T d1lnsa3 15 TFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKST----EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTS 90 (405)
T ss_dssp CSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCS----SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCS
T ss_pred eecCCCceEeEEEEeCCCCCCCCCCEeEEEEEEEccCCC----CCceEEEEeCCcCCCCccccccccccccccccccccc
Confidence 35555567788888765 899 599999999865 58999997532 1
Q ss_pred --------------------------CCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHH
Q 010654 273 --------------------------YEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF 326 (505)
Q Consensus 273 --------------------------~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~ 326 (505)
+............++|+++||+|+.+|.||+|+++..|. ..+..+.+|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~-----~~~~~e~~D~ 165 (405)
T d1lnsa3 91 HEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSM 165 (405)
T ss_dssp EECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccchHHHHhCCCEEEEECCCCCCCCCCccc-----cCChhhhhhH
Confidence 000011111234578999999999999999999988764 3445678999
Q ss_pred HHHHHHHHHcCCCCC--------------CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 327 IACAEYLIKNCYCTK--------------EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 327 ~~~~~~l~~~~~~d~--------------~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
.++|+|+.++..+++ .|||++|.||||++.+.+|+..|..++|+|..+++.|+...+.........
T Consensus 166 ~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~ 245 (405)
T d1lnsa3 166 TAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSP 245 (405)
T ss_dssp HHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCC
T ss_pred HHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccc
Confidence 999999987533222 589999999999999999998888999999999999986654322111000
Q ss_pred cc-cc-------------------------------------cc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccC
Q 010654 393 AE-WE-------------------------------------EW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGL 433 (505)
Q Consensus 393 ~~-~~-------------------------------------~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~ 433 (505)
.. +. .. ..+... +++.+.+|..++++|++| +|+++|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~w~~~s~~~~~~~I~vP-~L~i~Gw 321 (405)
T d1lnsa3 246 GGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYN---QFWHDRNYLINTDKVKAD-VLIVHGL 321 (405)
T ss_dssp TTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCC---HHHHTTBGGGGGGGCCSE-EEEEEET
T ss_pred cchhhhhhhhhhccccccccccchhhhchhhhhhccchhhhhhhhccccch---hhhhhcChhhhhhcCCCC-EEEEEec
Confidence 00 00 00 011111 235778999999999997 9999999
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 434 NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 434 ~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.|..|++.++.+++++|++ +.+.++++.| .+|...... ...+....+++||+++|+..
T Consensus 322 ~D~~v~~~~~~~~y~al~~-~~~~~Lilgp----w~H~~~~~~-~~~d~~~~~~~wFD~~LkG~ 379 (405)
T d1lnsa3 322 QDWNVTPEQAYNFWKALPE-GHAKHAFLHR----GAHIYMNSW-QSIDFSETINAYFVAKLLDR 379 (405)
T ss_dssp TCCSSCTHHHHHHHHHSCT-TCCEEEEEES----CSSCCCTTB-SSCCHHHHHHHHHHHHHTTC
T ss_pred cCCCCCHHHHHHHHHHHHh-CCCcEEEEeC----CCCCCCccc-ccchHHHHHHHHHHHHhCCC
Confidence 9999999999999999974 5666777665 478542211 11112234688999999654
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.89 E-value=1.1e-22 Score=193.59 Aligned_cols=248 Identities=19% Similarity=0.174 Sum_probs=158.1
Q ss_pred CCCCCceEEEEEEECCCCc-eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHH-CCcEEEEEcccC
Q 010654 226 FDTNNYFTERKWASASDGT-QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRG 302 (505)
Q Consensus 226 ~~~~~~~~~~~~~~s~dG~-~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~rG 302 (505)
.....+..+.+++++.||. .|++++++|++. .++.|+||++|||...... ..+......++. .||+|+.+|||.
T Consensus 43 ~~~~~v~~~~~~~~~~~g~~~i~~~~~~P~~~---~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl 119 (317)
T d1lzla_ 43 LSFDGVSLRELSAPGLDGDPEVKIRFVTPDNT---AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRL 119 (317)
T ss_dssp CCCTTEEEEEEEECCSTTCCCEEEEEEEESSC---CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCC
T ss_pred CCCCCceEEEEEEecCCCCceEEEEEECCCCC---CCCCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccc
Confidence 3445667889999999986 699999999864 4678999999998643322 223334455655 599999999998
Q ss_pred CCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCC
Q 010654 303 GGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVP 375 (505)
Q Consensus 303 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~ 375 (505)
.++. .....++|+.+++.|+.++ ..+|++||+|+|+|+||++++.++.+.++ .....+...+
T Consensus 120 ~pe~-----------~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~ 188 (317)
T d1lzla_ 120 APET-----------TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIP 188 (317)
T ss_dssp TTTS-----------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESC
T ss_pred cccc-----------cccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcccccccccccccc
Confidence 7653 2235678999999988764 34899999999999999999988865322 1122222222
Q ss_pred chhhh----hhccCCCCCC-Ccc--cc------cc-cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCC
Q 010654 376 FVDVL----TTMLDPTIPL-TTA--EW------EE-WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 376 ~~d~~----~~~~~~~~~~-~~~--~~------~~-~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~ 441 (505)
..+.. ........+. ... .+ .. ...+.++... ...+|.........||+||+||+.|.. ..
T Consensus 189 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pp~li~~g~~D~l--~~ 263 (317)
T d1lzla_ 189 ELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVS---IYAAPSRATDLTGLPPTYLSTMELDPL--RD 263 (317)
T ss_dssp CCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCC---TTTCGGGCSCCTTCCCEEEEEETTCTT--HH
T ss_pred cccccccccccccccccchhhhhhhHHHHhhhccccccCCCCchhc---cccCchhhhhccCCCCeEEEECCCCCC--HH
Confidence 11100 0000000000 000 00 00 0001111100 012333333333456799999999965 47
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHhhC
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSK--SGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++++|+++|+++|+++++++|+ +++|++. .......+...+.++||.++|+
T Consensus 264 ~~~~~~~~L~~~G~~v~~~~~~---g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 264 EGIEYALRLLQAGVSVELHSFP---GTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp HHHHHHHHHHHTTCCEEEEEET---TCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCCEEEEEEC---cCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999998 8899753 1223334445678999999986
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.89 E-value=2.6e-22 Score=184.86 Aligned_cols=192 Identities=17% Similarity=0.146 Sum_probs=143.7
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHH
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 325 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 325 (505)
..+.|++|.+. .+++.|+||++||+.+... .+......|+++||+|+.+|++|....... ...|
T Consensus 37 ~~~~ly~P~~~--~~g~~P~Vv~~HG~~g~~~--~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~~------------~~~d 100 (260)
T d1jfra_ 37 GGGTIYYPTST--ADGTFGAVVISPGFTAYQS--SIAWLGPRLASQGFVVFTIDTNTTLDQPDS------------RGRQ 100 (260)
T ss_dssp CCEEEEEESCC--TTCCEEEEEEECCTTCCGG--GTTTHHHHHHTTTCEEEEECCSSTTCCHHH------------HHHH
T ss_pred cCEEEEEcCCC--CCCCccEEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEEeeCCCcCCchh------------hHHH
Confidence 34778999864 4568899999999866543 345567899999999999999987654332 2477
Q ss_pred HHHHHHHHHHc----CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCC
Q 010654 326 FIACAEYLIKN----CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 401 (505)
Q Consensus 326 ~~~~~~~l~~~----~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 401 (505)
+.++++++.+. +.+|++||+++|+|+||.+++.++...+ +++|+++.+|....
T Consensus 101 ~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~---------------------- 157 (260)
T d1jfra_ 101 LLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD---------------------- 157 (260)
T ss_dssp HHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC----------------------
T ss_pred HHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc----------------------
Confidence 88888988875 6799999999999999999999999765 78888887764210
Q ss_pred CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHH
Q 010654 402 WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLR 481 (505)
Q Consensus 402 ~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 481 (505)
....++++| +|++||+.|.++|+.+..+++.++...+.+.+++.++ |++|++.......+.
T Consensus 158 ---------------~~~~~~~~P-~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~---ga~H~~~~~~~~~~~ 218 (260)
T d1jfra_ 158 ---------------KTWPELRTP-TLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELR---GASHFTPNTSDTTIA 218 (260)
T ss_dssp ---------------CCCTTCCSC-EEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEET---TCCTTGGGSCCHHHH
T ss_pred ---------------ccccccccc-eeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEEC---CCccCCCCCChHHHH
Confidence 011234566 9999999999999988766666666667788888887 899976432222222
Q ss_pred HHHHHHHHHHHhhCCC
Q 010654 482 EAAFTYTFLMRALSML 497 (505)
Q Consensus 482 ~~~~~~~fl~~~l~~~ 497 (505)
..+++||+++|+..
T Consensus 219 --~~~~~wl~~~L~~d 232 (260)
T d1jfra_ 219 --KYSISWLKRFIDSD 232 (260)
T ss_dssp --HHHHHHHHHHHSCC
T ss_pred --HHHHHHHHHHhcCc
Confidence 24789999998643
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.88 E-value=8e-22 Score=191.79 Aligned_cols=259 Identities=16% Similarity=0.143 Sum_probs=170.3
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcC--CCCc--CC-CC----CCchhHHHHHHCCcEEEEEc
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYG--SYEI--CN-DP----AFNSSRLSLLDRGFIFAIAQ 299 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hG--g~~~--~~-~~----~~~~~~~~l~~~G~~v~~~d 299 (505)
..+..+.|.++.+||.+|.+.|++|++. +++|+||..|+ +... .. .. .+....+.|+++||+|+.+|
T Consensus 20 ~~~~~~~v~i~~rDG~~L~~~v~~P~~~----~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d 95 (381)
T d1mpxa2 20 NDYIKREVMIPMRDGVKLHTVIVLPKGA----KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 95 (381)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred cCceEEEEEEECCCCCEEEEEEEEeCCC----CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEe
Confidence 3567788999999999999999999764 78999999875 2111 11 11 11234578999999999999
Q ss_pred ccCCCCCchhHHHcc-----cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 300 IRGGGELGRQWYENG-----KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
.||+|+++..|.... .......++.|..++++|+.+++.+|.+||+++|+||||++++++|+..|..++|+|+.+
T Consensus 96 ~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~ 175 (381)
T d1mpxa2 96 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPES 175 (381)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEES
T ss_pred cCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeec
Confidence 999998877664321 122334689999999999999988888999999999999999999998899999999999
Q ss_pred Cchhhhhhcc---CC-----------------CCC-----CCcccccc-------------cCCCCCHHHH---------
Q 010654 375 PFVDVLTTML---DP-----------------TIP-----LTTAEWEE-------------WGDPWKEEFY--------- 407 (505)
Q Consensus 375 ~~~d~~~~~~---~~-----------------~~~-----~~~~~~~~-------------~g~~~~~~~~--------- 407 (505)
|+.|+..... .. ..+ .....+.. .+....+...
T Consensus 176 ~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 255 (381)
T d1mpxa2 176 PMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYD 255 (381)
T ss_dssp CCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSC
T ss_pred cccccccccccccCchhhhccHHHHHhhhhhccccchhhhhhhhhHHHHHhcccccccchhhccccchHHHHHhhCCCcc
Confidence 9988543210 00 000 00000000 0000000000
Q ss_pred HHHHhCChhh--cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc---CCCCCeEEEEecCCCCCCCC---------
Q 010654 408 FYMKSYSPVD--NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM---KTDDNILLFKCELGAGHFSK--------- 473 (505)
Q Consensus 408 ~~~~~~sp~~--~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~---~~~~~~~~~~~~~~~gH~~~--------- 473 (505)
..+...++.. ...++++| +|+++|..|..+.. .+...++.++.+ +.+.++++-|. +|...
T Consensus 256 ~~w~~~s~~~~~~~~~i~vP-~l~i~G~~d~~~~~-~~~~~~~~~~~~~~~~~~~~LviGPw----~H~~~~~~~~~~~~ 329 (381)
T d1mpxa2 256 AFWQEQALDKVMARTPLKVP-TMWLQGLWDQEDMW-GAIHSYAAMEPRDKRNTLNYLVMGPW----RHSQVNYDGSALGA 329 (381)
T ss_dssp HHHHTTCHHHHHHTSCCCSC-EEEEEETTCSSCSS-HHHHHHHHHGGGCTTSSSEEEEEESC----CTTGGGSCCSEETT
T ss_pred chhhhcCchhhhhhccccCc-eEEEeccccCCccc-cHHHHHHHHHHhccccCCceEEEecC----cCCCCccCCCcCCc
Confidence 1223344433 34567888 99999999976644 456666666543 46677877763 56311
Q ss_pred ---CChHHHHHHHHHHHHHHHHhhCCC
Q 010654 474 ---SGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 474 ---~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
............+++||+++|+..
T Consensus 330 ~~~~~~~~~~~~~~~~l~wFD~~LKg~ 356 (381)
T d1mpxa2 330 LNFEGDTARQFRHDVLRPFFDQYLVDG 356 (381)
T ss_dssp EECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccccchhhhhHHHHHHHHHHHHhCCC
Confidence 011122222334689999999754
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.88 E-value=2.6e-22 Score=193.83 Aligned_cols=250 Identities=16% Similarity=0.133 Sum_probs=163.1
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC---CCchhHHHHHHCCcEEEEEcccCCC
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP---AFNSSRLSLLDRGFIFAIAQIRGGG 304 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~---~~~~~~~~l~~~G~~v~~~d~rG~~ 304 (505)
...+..+..++++.||..|++.++.|++. +++.|+||++|||....... .+....+.++++|++|+.+|||.++
T Consensus 74 ~~~v~~~~~~i~~~dg~~i~~~iy~P~~~---~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~ 150 (358)
T d1jkma_ 74 RDDVETSTETILGVDGNEITLHVFRPAGV---EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAW 150 (358)
T ss_dssp CCCEEEEEEEEECTTSCEEEEEEEEETTC---CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSE
T ss_pred CCCccEEEEEEeCCCCCEEEEEEEecCCC---CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccc
Confidence 34567888899999999999999999875 46789999999996543332 2234567889999999999999875
Q ss_pred CCchhHHHcccccCCcchHHHHHHHHHHHHHcC-CCCCCcEEEEeeChHHHHHHHHHhh-----CCCceeEEEecCCchh
Q 010654 305 ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNM-----RPDLFKAAVAAVPFVD 378 (505)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~rv~i~G~S~GG~~~~~~~~~-----~p~~~~a~v~~~~~~d 378 (505)
+... .......++|+.++++|+.++. ..|++||+|+|.|+||++++.++.. ....+.+.+...|+++
T Consensus 151 ~~~p-------e~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~ 223 (358)
T d1jkma_ 151 TAEG-------HHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 223 (358)
T ss_dssp ETTE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred cccc-------cCCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceec
Confidence 4322 1234468999999999998762 4688999999999999998877643 2345778888888765
Q ss_pred hhhhccCCCCCCCc-ccc-cccCCCCCHHHHH-HHH--------hCChhhc---c---cCCCCCeEEEEccCCCCCCCCC
Q 010654 379 VLTTMLDPTIPLTT-AEW-EEWGDPWKEEFYF-YMK--------SYSPVDN---V---KAQNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 379 ~~~~~~~~~~~~~~-~~~-~~~g~~~~~~~~~-~~~--------~~sp~~~---~---~~~~~Pp~Li~~G~~D~~vp~~ 441 (505)
....... ...... ..+ ...+......... .+. ..+|... . .....||+||++|+.|..+ .
T Consensus 224 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~--~ 300 (358)
T d1jkma_ 224 GGYAWDH-ERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLR--D 300 (358)
T ss_dssp CCTTSCH-HHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTH--H
T ss_pred cccCccc-hhhcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCCH--H
Confidence 3211000 000000 000 0000000000000 000 0122111 0 1125678999999999765 6
Q ss_pred hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC----CChHHHHHH-HHHHHHHHHHh
Q 010654 442 EPAKFVAKLREMKTDDNILLFKCELGAGHFSK----SGRFERLRE-AAFTYTFLMRA 493 (505)
Q Consensus 442 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~~~~-~~~~~~fl~~~ 493 (505)
++++|+++|+++|+++++++|+ |.+|++. ...+...+. ...+..|+..+
T Consensus 301 e~~~~~~~L~~aGv~v~~~~~~---g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 301 EGIAFARRLARAGVDVAARVNI---GLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEET---TCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEEC---CCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 8899641 111233333 44577788664
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.88 E-value=3.2e-22 Score=189.56 Aligned_cols=240 Identities=15% Similarity=0.086 Sum_probs=157.3
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCCchhHHHHHHCC-cEEEEEcccCCCCCchh
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAFNSSRLSLLDRG-FIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~~~~~~~l~~~G-~~v~~~d~rG~~~~g~~ 309 (505)
.++.+++.. +|..|.+.+++|++. +++.|+||++|||..... ...+......++++| +.|+.+|||...+.
T Consensus 45 ~~~~~~~~~-~g~~i~~~~y~P~~~---~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~--- 117 (308)
T d1u4na_ 45 EVREFDMDL-PGRTLKVRMYRPEGV---EPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEH--- 117 (308)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECTTC---CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred cEEEEEEec-CCceEEEEEEecccc---CCCCCEEEEEecCeeeeeccccccchhhhhhhccccccccccccccccc---
Confidence 456666665 788999999999865 357999999999864332 233444556777764 57889999976642
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhhhh
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~ 382 (505)
.....++|+.++++|+.++. .+|++||+|+|+|+||++++.++....+ ...+.....+..+....
T Consensus 118 --------~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
T d1u4na_ 118 --------KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPA 189 (308)
T ss_dssp --------CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTT
T ss_pred --------ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccc
Confidence 33457799999999998764 5899999999999999999988765433 23444444444332111
Q ss_pred cc------CCCCC-CCccc----ccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 383 ML------DPTIP-LTTAE----WEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 383 ~~------~~~~~-~~~~~----~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
.. ..... ..... +..+.....+... ...++.........||+||+||+.|..+ .++++|+++|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~~~~L~ 264 (308)
T d1u4na_ 190 HPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTH---PWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALN 264 (308)
T ss_dssp SCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGC---TTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHH
T ss_pred cccchhhhccccccccchhhhhhhhcccCccccccc---hhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHHHHHHH
Confidence 00 00000 00000 0001010000000 1134444445557788999999999776 68999999999
Q ss_pred hcCCCCCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHhh
Q 010654 452 EMKTDDNILLFKCELGAGHFSK---SGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~~fl~~~l 494 (505)
++|+++++++|+ |++|++. ...++..+.+.++.+||.+.|
T Consensus 265 ~~G~~v~~~~~~---g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 265 KAGVKVEIENFE---DLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp HTTCCEEEEEEE---EEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCEEEEEEC---CCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999 6688652 222344455667889998876
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.88 E-value=3.6e-22 Score=180.93 Aligned_cols=211 Identities=16% Similarity=0.120 Sum_probs=148.1
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH-
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY- 311 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~- 311 (505)
.|.|++++.||..+++++..|.+ +++|+||++|++++... ......+.|+++||.|+.+|+.+.++.+....
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~~-----~~~P~vl~~h~~~G~~~--~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~ 75 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPAK-----APAPVIVIAQEIFGVNA--FMRETVSWLVDQGYAAVCPDLYARQAPGTALDP 75 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCSS-----SSEEEEEEECCTTBSCH--HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCT
T ss_pred ceEEEEEcCCCCEEEEEEECCCC-----CCceEEEEeCCCCCCCH--HHHHHHHHHHhcCCcceeeeeccCCCcCcccCh
Confidence 45678999999999999888854 57899999998765432 12334578999999999999876655432110
Q ss_pred ----------HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh
Q 010654 312 ----------ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 381 (505)
Q Consensus 312 ----------~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 381 (505)
...........+.|+.++++++.+.+. +.+||+++|+|+||.+++.++.. + .+.++++..|..-
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~-~~~~i~~~G~s~Gg~~a~~~a~~-~-~~~~~~~~~~~~~--- 149 (233)
T d1dina_ 76 QDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPY-SNGKVGLVGYCLGGALAFLVAAK-G-YVDRAVGYYGVGL--- 149 (233)
T ss_dssp TSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTT-EEEEEEEEEETHHHHHHHHHHHH-T-CSSEEEEESCSCG---
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCC-CCCceEEEEecccccceeecccc-c-ccceecccccccc---
Confidence 000011122467899999999988875 45899999999999999998875 4 3455554433100
Q ss_pred hccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 382 TMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 382 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
.+++..+.++++| +|++||++|+.||+++.+++.++++ .+.++++++
T Consensus 150 -------------------------------~~~~~~~~~i~~P-vl~~~G~~D~~vp~e~~~~~~~~~~-~~~~~~~~~ 196 (233)
T d1dina_ 150 -------------------------------EKQLNKVPEVKHP-ALFHMGGQDHFVPAPSRQLITEGFG-ANPLLQVHW 196 (233)
T ss_dssp -------------------------------GGGGGGGGGCCSC-EEEEEETTCTTSCHHHHHHHHHHHT-TCTTEEEEE
T ss_pred -------------------------------ccchhhhhccCCc-ceeeecccccCCCHHHHHHHHHHHh-cCCCEEEEE
Confidence 0122334566777 9999999999999998888877665 577889999
Q ss_pred EEecCCCCCCCCCC------hHHHHHHHHHHHHHHHH
Q 010654 462 FKCELGAGHFSKSG------RFERLREAAFTYTFLMR 492 (505)
Q Consensus 462 ~~~~~~~gH~~~~~------~~~~~~~~~~~~~fl~~ 492 (505)
|+ |++|++... .....+.+.++++||.+
T Consensus 197 y~---ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~ 230 (233)
T d1dina_ 197 YE---EAGHSFARTSSSGYVASAAALANERTLDFLAP 230 (233)
T ss_dssp ET---TCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred EC---CCCcCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence 98 889976321 12223335567888875
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.87 E-value=1.3e-21 Score=173.26 Aligned_cols=208 Identities=13% Similarity=0.037 Sum_probs=146.5
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC--CcCCCC-CCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY--EICNDP-AFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~--~~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+.+++..++| +|.+.+..|... ...+.+++|++|+-+ +..... .+....+.|+++||.|+.+|+||.|.+..
T Consensus 7 ~~~~l~i~gp~G-~l~~~~~~p~~~--~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g 83 (218)
T d2fuka1 7 ESAALTLDGPVG-PLDVAVDLPEPD--VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 83 (218)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTT--SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred CceEEEEeCCCc-cEEEEEEcCCCC--CCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCC
Confidence 346678888898 688887777553 334557778887432 222211 12234578999999999999999987655
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCC
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
.+ .......+|+.++++|+.++. +.++++++|+|+||.+++.++.+. ..+++|+.+|..+...+
T Consensus 84 ~~------~~~~~~~~D~~a~~~~~~~~~--~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~~~------ 147 (218)
T d2fuka1 84 SF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWDF------ 147 (218)
T ss_dssp CC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBCC------
T ss_pred cc------CcCcchHHHHHHHHHHHhhcc--cCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccchhh------
Confidence 33 233467899999999999874 457899999999999999888763 35778887775432100
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
++ .+..+| +|+|||+.|+.||++++.++++++. .+.++++++ |+
T Consensus 148 -------------------------~~----~~~~~P-~Lvi~G~~D~~vp~~~~~~l~~~~~---~~~~l~~i~---ga 191 (218)
T d2fuka1 148 -------------------------SD----VQPPAQ-WLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMP---DT 191 (218)
T ss_dssp -------------------------TT----CCCCSS-EEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEET---TC
T ss_pred -------------------------hc----cccccc-eeeEecCCCcCcCHHHHHHHHHHcc---CCceEEEeC---CC
Confidence 00 122456 9999999999999999988876554 456788888 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 469 GHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+|++..... .+ ...+.+|+.++|..+
T Consensus 192 ~H~f~~~~~-~l--~~~~~~~v~~~l~~~ 217 (218)
T d2fuka1 192 SHFFHRKLI-DL--RGALQHGVRRWLPAT 217 (218)
T ss_dssp CTTCTTCHH-HH--HHHHHHHHGGGCSSC
T ss_pred CCCCCCCHH-HH--HHHHHHHHHHhcCCC
Confidence 998764332 22 235788999998654
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.87 E-value=8.1e-22 Score=185.69 Aligned_cols=225 Identities=15% Similarity=0.099 Sum_probs=150.8
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch-hHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR-QWY 311 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~-~~~ 311 (505)
++...++..||..|++|.+.|++. ..++.|+||++||..+.. ..|......|+++||.|+.+|+||++|... .+.
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~--~~~~~~~Vvi~HG~~~~~--~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~ 79 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKEN--VPFKNNTILIASGFARRM--DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID 79 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT--SCCCSCEEEEECTTCGGG--GGGHHHHHHHHTTTCCEEEECCCBCC--------
T ss_pred eeeeEEEcCCCCEEEEEEecCcCC--CCCCCCEEEEeCCCcchH--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 345567789999999998888764 345789999999976543 346677889999999999999999744322 221
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc---CCCC
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPTI 388 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~~ 388 (505)
.........|+.++++++.+++ +++++|+|+||||.+++.++.. ..++++|+.+|+.++..... ....
T Consensus 80 ----~~~~~~~~~dl~~vi~~l~~~~---~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~~~~~~~ 150 (302)
T d1thta_ 80 ----EFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEKALGFDY 150 (302)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHHHHSSCG
T ss_pred ----CCCHHHHHHHHHHHHHhhhccC---CceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHHHHhhcc
Confidence 1111246789999999998874 4789999999999998887763 35789999999877543221 1000
Q ss_pred C-CCccccc---cc-CCCCCHHHH--HHHHh-----CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 389 P-LTTAEWE---EW-GDPWKEEFY--FYMKS-----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 389 ~-~~~~~~~---~~-g~~~~~~~~--~~~~~-----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
+ ....... .. +.......+ ..+.. .++...+.++++| +|++||++|..||+++++++++.++.. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vLii~G~~D~~V~~~~~~~l~~~i~s~--~ 227 (302)
T d1thta_ 151 LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVP-LIAFTANNDDWVKQEEVYDMLAHIRTG--H 227 (302)
T ss_dssp GGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSC-EEEEEETTCTTSCHHHHHHHHTTCTTC--C
T ss_pred chhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCC-EEEEEeCCCCccCHHHHHHHHHhCCCC--C
Confidence 0 0000000 00 000011111 11110 1345678888998 999999999999999999998877543 4
Q ss_pred CCeEEEEecCCCCCCCCCCh
Q 010654 457 DNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~~ 476 (505)
.++++++ |++|....+.
T Consensus 228 ~kl~~~~---g~~H~l~e~~ 244 (302)
T d1thta_ 228 CKLYSLL---GSSHDLGENL 244 (302)
T ss_dssp EEEEEET---TCCSCTTSSH
T ss_pred ceEEEec---CCCcccccCh
Confidence 5677887 8999876553
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=8.8e-21 Score=179.45 Aligned_cols=234 Identities=18% Similarity=0.157 Sum_probs=155.0
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCchhHHHHHH-CCcEEEEEcccCCCCCch
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSSRLSLLD-RGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~ 308 (505)
..++.+++++.+| .|++.++.|+. +.|+||++|||....... .+....+.+++ .|++|+.+|||.+.++
T Consensus 54 ~~~~~~~i~~~~g-~i~~~iy~P~~------~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~-- 124 (311)
T d1jjia_ 54 ERVEDRTIKGRNG-DIRVRVYQQKP------DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEH-- 124 (311)
T ss_dssp SEEEEEEEEETTE-EEEEEEEESSS------SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTS--
T ss_pred ceEEEEEEeCCCC-cEEEEEEcCCC------CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEecccccccc--
Confidence 3677788888888 69999888864 349999999996543332 23334455545 6999999999988753
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC----CCceeEEEecCCchhhhh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR----PDLFKAAVAAVPFVDVLT 381 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~~~~~d~~~ 381 (505)
.....++|+.++++|+.++ ..+|++||+|+|.|+||++++.++... .....+.++..|.+++..
T Consensus 125 ---------~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~ 195 (311)
T d1jjia_ 125 ---------KFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVA 195 (311)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSS
T ss_pred ---------ccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeecc
Confidence 2335689999999999875 368999999999999999988776432 336788888888877432
Q ss_pred hcc-----CCCCCCCcccc----cccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHh
Q 010654 382 TML-----DPTIPLTTAEW----EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 452 (505)
Q Consensus 382 ~~~-----~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~ 452 (505)
... ........... .....+...... -...||+....+ ..||+||+||+.|..+ .++.+|+++|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~sp~~~~~~-~~pP~li~~g~~D~l~--d~~~~~~~~L~~ 270 (311)
T d1jjia_ 196 PTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKF--NPLASVIFADLE-NLPPALIITAEYDPLR--DEGEVFGQMLRR 270 (311)
T ss_dssp CCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGG--CTTTSGGGSCCT-TCCCEEEEEEEECTTH--HHHHHHHHHHHH
T ss_pred CcccccccccccccccHHHhhhhhhhccccccccc--ccccchhhcccc-cCCCEEEEEcCCCCCh--HHHHHHHHHHHH
Confidence 110 00000000000 000000000000 012467655433 5667999999999776 599999999999
Q ss_pred cCCCCCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHHH
Q 010654 453 MKTDDNILLFKCELGAGHFSK---SGRFERLREAAFTYTFL 490 (505)
Q Consensus 453 ~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~~fl 490 (505)
+|+++++++|+ |.+|++. ....+..+.+..+.+||
T Consensus 271 ~Gv~v~~~~~~---g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 271 AGVEASIVRYR---GVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp TTCCEEEEEEE---EEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEC---CCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 99999999999 6688652 12233344455567776
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=2e-21 Score=176.65 Aligned_cols=210 Identities=17% Similarity=0.051 Sum_probs=136.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc----hHHHHHHHHHHHHHc
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN----TFTDFIACAEYLIKN 336 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~----~~~D~~~~~~~l~~~ 336 (505)
++.|+||++||..+... .|......|+++||+|+++|+||+|................. ...++.++..++...
T Consensus 22 ~~~~~vl~lHG~~~~~~--~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (238)
T d1ufoa_ 22 APKALLLALHGLQGSKE--HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEA 99 (238)
T ss_dssp SCCEEEEEECCTTCCHH--HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCCCHH--HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhc
Confidence 45699999999876432 233445678899999999999998865432211000000011 112222333334445
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChh
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPV 416 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~ 416 (505)
+.+++++++++|+|+||++++.++.++|+. +++++..+..+.... .+...+..+... .....++.
T Consensus 100 ~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~ 164 (238)
T d1ufoa_ 100 ERRFGLPLFLAGGSLGAFVAHLLLAEGFRP-RGVLAFIGSGFPMKL-------------PQGQVVEDPGVL-ALYQAPPA 164 (238)
T ss_dssp HHHHCCCEEEEEETHHHHHHHHHHHTTCCC-SCEEEESCCSSCCCC-------------CTTCCCCCHHHH-HHHHSCGG
T ss_pred cccCCceEEEEEecccHHHHHHHHhcCcch-hheeeeeeecccccc-------------cccccccccccc-chhhhhhh
Confidence 567889999999999999999999988854 555554443332111 011122233333 33457777
Q ss_pred hcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 417 DNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 417 ~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.+..+. +.| +|++||++|..||++++.+++++|++.+.+..+..+..+ |+||... ++. +....+||.++|.
T Consensus 165 ~~~~~~~~~P-~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-g~gH~~~---~~~---~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 165 TRGEAYGGVP-LLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEE-GAGHTLT---PLM---ARVGLAFLEHWLE 236 (238)
T ss_dssp GCGGGGTTCC-EEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEET-TCCSSCC---HHH---HHHHHHHHHHHHH
T ss_pred hhhhhhcCCC-eEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEEC-CCCCccC---HHH---HHHHHHHHHHHhc
Confidence 666655 566 999999999999999999999999999987655444333 8899764 232 2346789999884
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.85 E-value=3.6e-21 Score=176.51 Aligned_cols=184 Identities=15% Similarity=0.228 Sum_probs=136.8
Q ss_pred EEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHH
Q 010654 248 ICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF 326 (505)
Q Consensus 248 ~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~ 326 (505)
..+++|++ .+.|+||++|||++.... ..+....+.|+++||+|+.+|||.+++.. ....++|+
T Consensus 52 lDiy~P~~-----~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~-----------~p~~~~d~ 115 (261)
T d2pbla1 52 FDLFLPEG-----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR-----------ISEITQQI 115 (261)
T ss_dssp EEEECCSS-----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-----------HHHHHHHH
T ss_pred EEEeccCC-----CCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccccc-----------CchhHHHH
Confidence 45566754 357999999999864433 44556678999999999999999876532 22568999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC------CceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 327 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP------DLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 327 ~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p------~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
.++++|+.++. ++||+|+|+|+||+++++++.... ..+++++..+|+.++...... .. . ..++
T Consensus 116 ~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~--~~~~- 184 (261)
T d2pbla1 116 SQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT-SM----N--EKFK- 184 (261)
T ss_dssp HHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS-TT----H--HHHC-
T ss_pred HHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh-hh----c--cccc-
Confidence 99999999874 589999999999999988876532 257899999998886433211 00 0 1111
Q ss_pred CCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 401 PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 401 ~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
.+++. ....||+.++.+.+.| +||+||++|..++..|+++|+++|+. +.+.++ +.+|+
T Consensus 185 -~~~~~---~~~~SP~~~~~~~~~P-~li~~G~~D~~~~~~qs~~~~~~l~~-----~~~~~~---~~~HF 242 (261)
T d2pbla1 185 -MDADA---AIAESPVEMQNRYDAK-VTVWVGGAERPAFLDQAIWLVEAWDA-----DHVIAF---EKHHF 242 (261)
T ss_dssp -CCHHH---HHHTCGGGCCCCCSCE-EEEEEETTSCHHHHHHHHHHHHHHTC-----EEEEET---TCCTT
T ss_pred -CCHHH---HHHhCchhhcccCCCe-EEEEEecCCCchHHHHHHHHHHHhCC-----CceEeC---CCCch
Confidence 23333 3678999999887775 99999999999999999999999964 445666 77784
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.85 E-value=2.4e-20 Score=181.72 Aligned_cols=260 Identities=16% Similarity=0.150 Sum_probs=169.5
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC----CcCCCC------CCchhHHHHHHCCcEEEEE
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY----EICNDP------AFNSSRLSLLDRGFIFAIA 298 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~----~~~~~~------~~~~~~~~l~~~G~~v~~~ 298 (505)
..+..+.|.++.+||.+|.+.|++|++. ++.|+||..|.-. ...... .+....+.|+++||+|+.+
T Consensus 24 ~~~~~~~v~ipmrDG~~L~~~v~~P~~~----~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~ 99 (385)
T d2b9va2 24 RDYIKREVMVPMRDGVKLYTVIVIPKNA----RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 99 (385)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred CCCeEeEEEEECCCCCEEEEEEEEcCCC----CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEE
Confidence 3467788999999999999999999764 7899999875311 111111 1123347899999999999
Q ss_pred cccCCCCCchhHHHcc-----cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 299 QIRGGGELGRQWYENG-----KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 299 d~rG~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
|+||.|+++..|.... .......+.+|..++++|+.+++..+.+||+++|+||||++++.+|++.|..++|++..
T Consensus 100 d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~ 179 (385)
T d2b9va2 100 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 179 (385)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCCcccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEe
Confidence 9999999988775322 22344578999999999999998777899999999999999999999888999999998
Q ss_pred CCchhhhhhcc---CC---------------------CCCC-Ccccccc---cC----------CCCCHHHH--------
Q 010654 374 VPFVDVLTTML---DP---------------------TIPL-TTAEWEE---WG----------DPWKEEFY-------- 407 (505)
Q Consensus 374 ~~~~d~~~~~~---~~---------------------~~~~-~~~~~~~---~g----------~~~~~~~~-------- 407 (505)
.+..|+..... .. ..+. ....+.. .+ ....+...
T Consensus 180 ~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~ 259 (385)
T d2b9va2 180 SPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAY 259 (385)
T ss_dssp EECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSS
T ss_pred cccccccccccccCCchhccccHHHHHhhhhhcccCccccccchHHHHHHHHhccccccchhcccchhhhhhhhccCccc
Confidence 88777533110 00 0000 0000000 00 00000000
Q ss_pred -HHHHhCChhhcc--cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC--CCCCeEEEEecCCCCCCCC---------
Q 010654 408 -FYMKSYSPVDNV--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK--TDDNILLFKCELGAGHFSK--------- 473 (505)
Q Consensus 408 -~~~~~~sp~~~~--~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~--~~~~~~~~~~~~~~gH~~~--------- 473 (505)
.++...++...+ .++..| +|+++|..|... ...+.+.+++|+.+. .+.++++-|- +|...
T Consensus 260 d~~w~~~s~~~~~~~~~i~vP-~l~~~g~~dd~~-~~g~~~~~~~l~~~~~~~~~~LiiGPw----~H~~~~~~~~~~g~ 333 (385)
T d2b9va2 260 DAFWQGQALDKILAQRKPTVP-MLWEQGLWDQED-MWGAIHAWQALKDADVKAPNTLVMGPW----RHSGVNYNGSTLGP 333 (385)
T ss_dssp SHHHHTTCHHHHHHHHCCCSC-EEEEEETTCSSC-SSHHHHHHHHHHHTTCSSCEEEEEESC----CTTGGGSCCSEETT
T ss_pred chhhhhcChhHHHhhccccCc-eEEEEecccCCc-ccchHHHHHHHHhhccCCCcEEEEeCC----cCCCcccccccccc
Confidence 223444554333 345677 888889877543 567888888887764 4556666652 45321
Q ss_pred ---CChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 474 ---SGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 474 ---~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
............+++||+++|+...
T Consensus 334 ~~~~~~~~~~~~~~~~l~WFD~~LKG~~ 361 (385)
T d2b9va2 334 LEFEGDTAHQYRRDVFRPFFDEYLKPGS 361 (385)
T ss_dssp EECSSCHHHHHHHHTHHHHHHHHHSTTC
T ss_pred cccCcccchhhHHHHHHHHHHHHcCCCC
Confidence 0111222223346899999997643
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.82 E-value=7.5e-20 Score=171.20 Aligned_cols=253 Identities=15% Similarity=0.037 Sum_probs=165.8
Q ss_pred CceEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCC
Q 010654 230 NYFTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGE 305 (505)
Q Consensus 230 ~~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~ 305 (505)
.++++.+++.|+ .|.+++..+..| .+++|+|+++||+++......|.. ..+.+.+.|++|++++..+.+.
T Consensus 6 ~~~v~~~~~~s~~~~r~~~~~v~~p------~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 79 (288)
T d1sfra_ 6 GLPVEYLQVPSPSMGRDIKVQFQSG------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSF 79 (288)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEECC------STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCT
T ss_pred CCEEEEEEEECCCCCcEEEEEEeCC------CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCC
Confidence 345566777654 677888765433 257999999999765544333322 2356677899999999987765
Q ss_pred CchhHHHcccc-c--CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 306 LGRQWYENGKF-L--KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 306 ~g~~~~~~~~~-~--~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
++..+...... . ....+-.-+.+.+.++.++..+|++|++|+|+|+||++++.++.++|++|+++++.+|..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~~~ 159 (288)
T d1sfra_ 80 YSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQA 159 (288)
T ss_dssp TCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTST
T ss_pred CccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccccc
Confidence 55433211111 1 11122223456778888887899999999999999999999999999999999999998764322
Q ss_pred ccCCCCC-----CCcccc-cccCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCCCCCC--------------
Q 010654 383 MLDPTIP-----LTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDPRVMY-------------- 440 (505)
Q Consensus 383 ~~~~~~~-----~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~~vp~-------------- 440 (505)
....... ...... ..+|.+..+ .+...+|+.++.+. +.+++++.+|..|..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~e~~~~ 235 (288)
T d1sfra_ 160 MGPTLIGLAMGDAGGYKASDMWGPKEDP----AWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVR 235 (288)
T ss_dssp THHHHHHHHHHHTTSCCHHHHHCSTTST----HHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHH
T ss_pred ccchhhhhhhhhcccccHhhhcCCcchh----hhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccccchhHHHHH
Confidence 1000000 000000 112333222 23567887766544 223599999999988775
Q ss_pred ChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 441 SEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 441 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
.++++|.++|+++|+++.+..++. +++|... .. ...+...+.||.+.||..|
T Consensus 236 ~~~~~l~~~l~~~g~~~~~~~~~~--~G~H~w~--~w--~~~l~~~l~~l~~alg~~~ 287 (288)
T d1sfra_ 236 TSNIKFQDAYNAGGGHNGVFDFPD--SGTHSWE--YW--GAQLNAMKPDLQRALGATP 287 (288)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCS--CCCSSHH--HH--HHHHHHTHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHCCCCeEEEEECC--CCccChh--HH--HHHHHHHHHHHHHhcCCCC
Confidence 567899999999999998877772 3469531 11 2234457899999999765
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.82 E-value=1.2e-19 Score=160.48 Aligned_cols=186 Identities=14% Similarity=0.090 Sum_probs=130.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc-c----CCcchHHHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF-L----KKKNTFTDFIACAEYLIK 335 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~-~----~~~~~~~D~~~~~~~l~~ 335 (505)
++.|+||++||..+.. ..|......+ ..++.|+.++.......+..+...... . ......+++...++++.+
T Consensus 12 ~~~P~vi~lHG~g~~~--~~~~~~~~~l-~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNE--LDLLPLAEIV-DSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAK 88 (202)
T ss_dssp TTSCEEEEECCTTCCT--TTTHHHHHHH-HTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCH--HHHHHHHHHh-ccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 6689999999975433 2344444444 468888888654332222222110000 0 011245567777788888
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 415 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 415 (505)
+..+|++||+++|+|+||++++.++.++|+++.++++.+|..... ..
T Consensus 89 ~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~------~~--------------------------- 135 (202)
T d2h1ia1 89 EYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR------GM--------------------------- 135 (202)
T ss_dssp HTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS------SC---------------------------
T ss_pred hccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcc------cc---------------------------
Confidence 888999999999999999999999999999999999988754310 00
Q ss_pred hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 416 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 416 ~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
........ +++++||++|++||++++++++++|+++|++++++.|+ + ||... .+. ...+.+||.+.+
T Consensus 136 -~~~~~~~~-~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~---g-gH~~~---~~~---~~~~~~wl~k~f 202 (202)
T d2h1ia1 136 -QLANLAGK-SVFIAAGTNDPICSSAESEELKVLLENANANVTMHWEN---R-GHQLT---MGE---VEKAKEWYDKAF 202 (202)
T ss_dssp -CCCCCTTC-EEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEES---S-TTSCC---HHH---HHHHHHHHHHHC
T ss_pred -cccccccc-hhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEEC---C-CCcCC---HHH---HHHHHHHHHHhC
Confidence 00111123 59999999999999999999999999999999999887 4 79764 222 335789999864
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=2.9e-20 Score=171.55 Aligned_cols=189 Identities=12% Similarity=0.063 Sum_probs=124.2
Q ss_pred CCCcEEEEEcCCCCcCCC---CCCchhH----HHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICND---PAFNSSR----LSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL 333 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~---~~~~~~~----~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 333 (505)
++.|+||++|||...... ..|.... ..++++||.|+.+|||.+++.. ....++|+.++++|+
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~-----------~~~~~~d~~~~~~~l 97 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNITRL 97 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchh-----------hhHHHHhhhhhhhcc
Confidence 567999999998643222 2232222 3445789999999999887532 235689999999999
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----------------ceeEEEecCCchhhhhhccCCCCCCCcccc-
Q 010654 334 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----------------LFKAAVAAVPFVDVLTTMLDPTIPLTTAEW- 395 (505)
Q Consensus 334 ~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----------------~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~- 395 (505)
.++. ++++|+|+|+|+||++++.++...++ ...+.+...+..++...... .+......
T Consensus 98 ~~~~--~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 173 (263)
T d1vkha_ 98 VKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIE--YPEYDCFTR 173 (263)
T ss_dssp HHHH--TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHH--CGGGHHHHH
T ss_pred cccc--cccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhh--ccccchhhh
Confidence 9874 67899999999999999998876543 34555555555554332210 00000000
Q ss_pred cccCC-C----CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 396 EEWGD-P----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 396 ~~~g~-~----~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
..++. + ...... . ......+.++..| +|++||++|+.||+.++.+|+++|++.|+++++++++ +++|
T Consensus 174 ~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~P-~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~---~~~H 245 (263)
T d1vkha_ 174 LAFPDGIQMYEEEPSRV--M--PYVKKALSRFSID-MHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDD---LGLH 245 (263)
T ss_dssp HHCTTCGGGCCCCHHHH--H--HHHHHHHHHHTCE-EEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEEC---CCSG
T ss_pred ccccccccccccccccc--C--ccccccccccCCC-eeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEEC---CCCc
Confidence 00111 1 000000 0 0112223344555 9999999999999999999999999999999999998 7889
Q ss_pred CC
Q 010654 471 FS 472 (505)
Q Consensus 471 ~~ 472 (505)
..
T Consensus 246 ~~ 247 (263)
T d1vkha_ 246 ND 247 (263)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.7e-19 Score=166.67 Aligned_cols=210 Identities=12% Similarity=0.057 Sum_probs=144.8
Q ss_pred CceEEEEEEECCCCc-eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 230 NYFTERKWASASDGT-QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~-~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
....+.+.+.+.||. ++.++|+.|++. ++++++|+|+++||++...... .....+....+|++|+.+++++...++.
T Consensus 10 ~~~~~~~~~~s~dg~~~~~~~v~~P~~~-~~~~~yPvi~~lhG~~~~~~~~-~~~~~~~~~~~~~~vV~v~~~~~~~~~~ 87 (265)
T d2gzsa1 10 FYHFSATSFDSVDGTRHYRVWTAVPNTT-APASGYPILYMLDGNAVMDRLD-DELLKQLSEKTPPVIVAVGYQTNLPFDL 87 (265)
T ss_dssp SEEEEEEEEECTTSSCEEEEEEEEESSC-CCTTCEEEEEESSHHHHHHHCC-HHHHHHHTTSCCCEEEEEEESSSSSCCH
T ss_pred cceeEEEEEEcCCCCEEEEEEEEcCCCC-CCCCCceEEEEecCcchhhhHH-HHHHHHHHhcCCCeEEEecCCCCCcCcc
Confidence 346788899999985 799999999998 7888999999999975322111 1122344556799999999999987765
Q ss_pred hHHHcccc-----------------c-CCcchHHHH--HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCcee
Q 010654 309 QWYENGKF-----------------L-KKKNTFTDF--IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 368 (505)
Q Consensus 309 ~~~~~~~~-----------------~-~~~~~~~D~--~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~ 368 (505)
..+..... . .+...+.+. ..++.++.++..+|+++++|+|+|+||++++.++.+ ++.|.
T Consensus 88 ~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~ 166 (265)
T d2gzsa1 88 NSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFR 166 (265)
T ss_dssp HHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCS
T ss_pred cccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccC
Confidence 43211100 0 001112222 234566666677899999999999999999998876 66888
Q ss_pred EEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCC--------CCCCCC
Q 010654 369 AAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN--------DPRVMY 440 (505)
Q Consensus 369 a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~--------D~~vp~ 440 (505)
++++.+|...+.. ...... .+++......+.| +++.+|+. |.++++
T Consensus 167 ~~~a~s~~~~~~~----------------------~~~~~~---~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~d~~~~~ 220 (265)
T d2gzsa1 167 SYYSASPSLGRGY----------------------DALLSR---VTAVEPLQFCTKH-LAIMEGSATQGDNRETHAVGVL 220 (265)
T ss_dssp EEEEESGGGSTTH----------------------HHHHHH---HHTSCTTTTTTCE-EEEEECCC-----------CHH
T ss_pred EEEEECCcccccc----------------------hhhhhc---cccccccccCCCc-EEEEcCCcccccccccccchhH
Confidence 8888888654321 112212 2333333333444 88888866 778899
Q ss_pred ChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 441 SEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 441 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
.++++++++|+++|+++++.+|| |++|+
T Consensus 221 ~~~~~l~~~L~~~g~~~~~~~~p---G~~Hg 248 (265)
T d2gzsa1 221 SKIHTTLTILKDKGVNAVFWDFP---NLGHG 248 (265)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECT---TCCHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEcC---CCCcc
Confidence 99999999999999999999998 88995
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.79 E-value=6.9e-18 Score=150.46 Aligned_cols=209 Identities=14% Similarity=0.082 Sum_probs=149.9
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCC--cCC-CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE--ICN-DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~--~~~-~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
+.+..++| +|++++ .|+.. ...|++|++||.+. ... ..........|.++||.|+.+|+||.|.+...+
T Consensus 3 v~i~g~~G-~Le~~~-~~~~~----~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~-- 74 (218)
T d2i3da1 3 VIFNGPAG-RLEGRY-QPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF-- 74 (218)
T ss_dssp EEEEETTE-EEEEEE-ECCSS----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC--
T ss_pred EEEeCCCc-cEEEEE-eCCCC----CCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccc--
Confidence 66888899 799974 55432 45689999998542 221 111223446789999999999999999875543
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
..+..+.+|..++++|+..+...+ .++.++|+|+||.+++.++.+.+ ...++++.+|.......
T Consensus 75 ----~~~~~e~~d~~aa~~~~~~~~~~~-~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~~---------- 138 (218)
T d2i3da1 75 ----DHGAGELSDAASALDWVQSLHPDS-KSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYDF---------- 138 (218)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHCTTC-CCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSCC----------
T ss_pred ----ccchhHHHHHHHHHhhhhcccccc-cceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccch----------
Confidence 455678899999999999887544 46889999999999999998765 45555555554321100
Q ss_pred ccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc-CCCCCeEEEEecCCCCCC
Q 010654 393 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM-KTDDNILLFKCELGAGHF 471 (505)
Q Consensus 393 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~gH~ 471 (505)
..+.....| +|++||..|..+|..+..++++.++.. +...++++++ |++|+
T Consensus 139 ------------------------~~~~~~~~p-~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~---gAdHf 190 (218)
T d2i3da1 139 ------------------------SFLAPCPSS-GLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLP---GANHF 190 (218)
T ss_dssp ------------------------TTCTTCCSC-EEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEET---TCCTT
T ss_pred ------------------------hhccccCCC-ceeeecccceecChHHHHHHHHHHhhccCCCccEEEeC---CCCCC
Confidence 011122455 999999999999999999999999864 5566778887 89998
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 472 SKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 472 ~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
+.. ....+. ..+.+||+++|..+..
T Consensus 191 F~g-~~~~l~--~~v~~~l~~~l~~~~~ 215 (218)
T d2i3da1 191 FNG-KVDELM--GECEDYLDRRLNGELV 215 (218)
T ss_dssp CTT-CHHHHH--HHHHHHHHHHHTTCSS
T ss_pred CcC-CHHHHH--HHHHHHHHHhcCCCCC
Confidence 753 333332 3589999999966543
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.79 E-value=1.1e-17 Score=153.38 Aligned_cols=201 Identities=15% Similarity=0.084 Sum_probs=131.2
Q ss_pred ceEEEEEEEC-CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC-ch----hHHHHHHCC----cEEEEEcc
Q 010654 231 YFTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-NS----SRLSLLDRG----FIFAIAQI 300 (505)
Q Consensus 231 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~-~~----~~~~l~~~G----~~v~~~d~ 300 (505)
...+.+++.| .+|.++++++++|+++ ++++++|+||++||+++....... .. ........+ +.+...+.
T Consensus 20 g~~~~~~~~S~~~g~~~~~~v~lP~~y-~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (255)
T d1jjfa_ 20 GQVVNISYFSTATNSTRPARVYLPPGY-SKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNT 98 (255)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTC-CTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECC
T ss_pred eEEEEEEEEecCCCCEEEEEEEeCCCC-CCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccc
Confidence 4667777765 4789999999999998 788899999999998765433211 11 112233332 33444433
Q ss_pred cCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc--CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh
Q 010654 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378 (505)
Q Consensus 301 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 378 (505)
........... .......+.+.+.++.++ ..+|+++++++|+|+||++++.++.++|++|+++++.+|..+
T Consensus 99 ~~~~~~~~~~~-------~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 99 NAAGPGIADGY-------ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 171 (255)
T ss_dssp CCCCTTCSCHH-------HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred ccccccccccc-------cchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcC
Confidence 22211111100 001122233344555443 457899999999999999999999999999999999988654
Q ss_pred hhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCC
Q 010654 379 VLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 458 (505)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~ 458 (505)
..... ..+ + ++...... ..|+++|.||+.|..++ .+++++++|+++|++++
T Consensus 172 ~~~~~------------~~~--~------------~~~~~~~~-~~~~~~i~~G~~D~~~~--~~~~~~~~L~~~g~~~~ 222 (255)
T d1jjfa_ 172 TYPNE------------RLF--P------------DGGKAARE-KLKLLFIACGTNDSLIG--FGQRVHEYCVANNINHV 222 (255)
T ss_dssp SCCHH------------HHC--T------------TTTHHHHH-HCSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCCE
T ss_pred Ccccc------------ccc--c------------cHHHHhhc-cCCcceEEeCCCCCCch--HHHHHHHHHHHCCCCEE
Confidence 32110 000 0 11111111 12369999999999986 57899999999999999
Q ss_pred eEEEEecCCCCCC
Q 010654 459 ILLFKCELGAGHF 471 (505)
Q Consensus 459 ~~~~~~~~~~gH~ 471 (505)
+..++ ++||.
T Consensus 223 ~~~~~---~ggH~ 232 (255)
T d1jjfa_ 223 YWLIQ---GGGHD 232 (255)
T ss_dssp EEEET---TCCSS
T ss_pred EEEEC---CCCcC
Confidence 99998 78995
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.78 E-value=2.8e-19 Score=163.15 Aligned_cols=224 Identities=13% Similarity=0.061 Sum_probs=140.2
Q ss_pred ceEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc----EEEEEcccCCCC
Q 010654 231 YFTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF----IFAIAQIRGGGE 305 (505)
Q Consensus 231 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~----~v~~~d~rG~~~ 305 (505)
..++.+++.|. .|.+++++++.|++. + .+++|+||++||+....... .......+.++|. +++.++. +
T Consensus 13 ~~~~~~~~~S~~lg~~~~~~v~~P~~~-~-~~~~Pvvv~lhG~~~~~~~~-~~~~l~~l~~~~~~~~~i~v~~~~----~ 85 (246)
T d3c8da2 13 IPAKEIIWKSERLKNSRRVWIFTTGDV-T-AEERPLAVLLDGEFWAQSMP-VWPVLTSLTHRQQLPPAVYVLIDA----I 85 (246)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC-------CCCCEEEESSHHHHHHTSC-CHHHHHHHHHTTSSCSCEEEEECC----C
T ss_pred CCcEEEEEECCCCCCEEEEEEEECCCC-C-CCCCCEEEEeCCcchhccCc-HHHHHHHHHHhCCCCceEEeeccc----c
Confidence 35677777764 588899999999987 4 46799999999976433222 3334566777664 3333332 2
Q ss_pred CchhHHHcccccCCcchHHHHHH-HHHHHHHc--CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 306 LGRQWYENGKFLKKKNTFTDFIA-CAEYLIKN--CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~--~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
.+..+.. .......-.+.+.+ .+.++.+. ..+|+++++|+|+|+||++++.++.++|++|+++++.+|..++...
T Consensus 86 ~~~~~~~--~~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~ 163 (246)
T d3c8da2 86 DTTHRAH--ELPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 163 (246)
T ss_dssp SHHHHHH--HSSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred ccccccc--ccCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccC
Confidence 1121111 11111111222222 22233332 3478999999999999999999999999999999999998765321
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 383 MLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 383 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
. .... ..+ ...++.....+...| +++.+|..|.++. .++++|+++|+++|+++++..+
T Consensus 164 ~----------------~~~~-~~~---~~~~~~~~~~~~~~~-~~l~~G~~D~~~~-~~~~~l~~~L~~~g~~~~~~~~ 221 (246)
T d3c8da2 164 G----------------GQQE-GVL---LEKLKAGEVSAEGLR-IVLEAGIREPMIM-RANQALYAQLHPIKESIFWRQV 221 (246)
T ss_dssp T----------------SSSC-CHH---HHHHHTTSSCCCSCE-EEEEEESSCHHHH-HHHHHHHHHTGGGTTSEEEEEE
T ss_pred C----------------ccch-HHH---HHHhhhhhhhccCCC-eEEEecCCCcchh-HHHHHHHHHHHHCCCCEEEEEe
Confidence 1 1100 011 222455555565665 9999999998774 7899999999999999988888
Q ss_pred EecCCCCCCCCCChHHHH-HHHHHHHHHHHHhh
Q 010654 463 KCELGAGHFSKSGRFERL-REAAFTYTFLMRAL 494 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~-~~~~~~~~fl~~~l 494 (505)
+ | ||.. ..+ ..+.+.+.||-+.|
T Consensus 222 ~---G-gH~~-----~~W~~~l~~~l~~l~~~~ 245 (246)
T d3c8da2 222 D---G-GHDA-----LCWRGGLMQGLIDLWQPL 245 (246)
T ss_dssp S---C-CSCH-----HHHHHHHHHHHHHHHGGG
T ss_pred C---C-CCCh-----HHHHHHHHHHHHHHHHhh
Confidence 6 5 7943 222 23344566665543
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.75 E-value=7.7e-18 Score=149.32 Aligned_cols=182 Identities=18% Similarity=0.126 Sum_probs=124.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccc-cc----CCcchHHHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FL----KKKNTFTDFIACAEYLIK 335 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~-~~----~~~~~~~D~~~~~~~l~~ 335 (505)
++.|+||++||.++.. ..|....+.|+ .++.++.++.+.....+..|..... .. ......+++.+.++.+.+
T Consensus 21 ~~~p~vv~lHG~g~~~--~~~~~l~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 97 (209)
T d3b5ea1 21 ESRECLFLLHGSGVDE--TTLVPLARRIA-PTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAK 97 (209)
T ss_dssp SCCCEEEEECCTTBCT--TTTHHHHHHHC-TTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCH--HHHHHHHHHhc-cCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHH
Confidence 5589999999976543 23444445554 4788888876533222222211100 00 001335666677778887
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 415 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 415 (505)
+..+|++||+|+|+|+||++++.++.++|++|+++++.+|..... . .+
T Consensus 98 ~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~------~--------------------------~~ 145 (209)
T d3b5ea1 98 RHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------H--------------------------VP 145 (209)
T ss_dssp HHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------S--------------------------CC
T ss_pred HhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc------c--------------------------cc
Confidence 777899999999999999999999999999999999988843210 0 00
Q ss_pred hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 416 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 416 ~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
. ....+. |++++||++|+++| ..+.++.+.|++.|.++++..|+ + ||+.. ... ...+.+||.
T Consensus 146 ~--~~~~~~-p~~~~~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~---g-gH~i~---~~~---~~~~~~wl~ 207 (209)
T d3b5ea1 146 A--TDLAGI-RTLIIAGAADETYG-PFVPALVTLLSRHGAEVDARIIP---S-GHDIG---DPD---AAIVRQWLA 207 (209)
T ss_dssp C--CCCTTC-EEEEEEETTCTTTG-GGHHHHHHHHHHTTCEEEEEEES---C-CSCCC---HHH---HHHHHHHHH
T ss_pred c--cccccc-hheeeeccCCCccC-HHHHHHHHHHHHCCCCeEEEEEC---C-CCCCC---HHH---HHHHHHHhC
Confidence 0 111134 49999999999998 67889999999999999999887 5 79774 222 234567874
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=3.8e-18 Score=153.53 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=121.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC------CCCchhHHHccc-ccCCcch---HHHHHH--
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG------GELGRQWYENGK-FLKKKNT---FTDFIA-- 328 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~------~~~g~~~~~~~~-~~~~~~~---~~D~~~-- 328 (505)
+..++||++||..+... .|......+...++.++.++-+.. +..+..|..... ......+ +.+..+
T Consensus 19 ~~~~~VI~lHG~G~~~~--~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l 96 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH--GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENI 96 (229)
T ss_dssp CCSEEEEEECCSSSCHH--HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH--HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHH
Confidence 45689999999654321 132233344567899998874311 111222321111 0111122 222222
Q ss_pred --HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHH
Q 010654 329 --CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEF 406 (505)
Q Consensus 329 --~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 406 (505)
.++...+. .+|++||+|+|+|+||.+++.++.++|+.|+++++.+|.......+..
T Consensus 97 ~~li~~~~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~~~--------------------- 154 (229)
T d1fj2a_ 97 KALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQ--------------------- 154 (229)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSCS---------------------
T ss_pred HHHhhhhhhc-CCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccccc---------------------
Confidence 33333333 479999999999999999999999999999999998885322111100
Q ss_pred HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc--CCCCCeEEEEecCCCCCCCCCChHHHHHHHH
Q 010654 407 YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM--KTDDNILLFKCELGAGHFSKSGRFERLREAA 484 (505)
Q Consensus 407 ~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~--~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 484 (505)
++.. ..+.+.| +|++||++|++||+++++++++.|++. +.++++..|+ +.||... .+ .+.
T Consensus 155 -------~~~~-~~~~~~P-vli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~---g~gH~i~---~~---~~~ 216 (229)
T d1fj2a_ 155 -------GPIG-GANRDIS-ILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYE---GMMHSSC---QQ---EMM 216 (229)
T ss_dssp -------SCCC-STTTTCC-EEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEET---TCCSSCC---HH---HHH
T ss_pred -------cccc-cccccCc-eeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeC---CCCCccC---HH---HHH
Confidence 0000 0112355 999999999999999999999999885 5667777887 7899753 22 234
Q ss_pred HHHHHHHHhh
Q 010654 485 FTYTFLMRAL 494 (505)
Q Consensus 485 ~~~~fl~~~l 494 (505)
.+.+||.++|
T Consensus 217 ~~~~wL~~~L 226 (229)
T d1fj2a_ 217 DVKQFIDKLL 226 (229)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhHC
Confidence 5789999998
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.74 E-value=1e-16 Score=147.61 Aligned_cols=225 Identities=16% Similarity=0.154 Sum_probs=129.6
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
++++||.+|+.... +..|.||++||.+++. ..|......|+++||.|+.+|+||.|.+...
T Consensus 3 ~~t~dG~~l~y~~~---------G~g~~ivlvHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-------- 63 (274)
T d1a8qa_ 3 CTTRDGVEIFYKDW---------GQGRPVVFIHGWPLNG--DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPV-------- 63 (274)
T ss_dssp EECTTSCEEEEEEE---------CSSSEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EECcCCCEEEEEEE---------CCCCeEEEECCCCCCH--HHHHHHHHHHHHCCCEEEEEeCCCCcccccc--------
Confidence 57899988864321 2346788999986553 2366666788899999999999998865331
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh-hCCCceeEEEecCCchhhhhhccCCCCCCCc----
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT---- 392 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~---- 392 (505)
.......+....+..+++.- ..+++.++|||+||.+++.+++ ..|+++++.+..++.................
T Consensus 64 ~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (274)
T d1a8qa_ 64 WDGYDFDTFADDLNDLLTDL--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFD 141 (274)
T ss_dssp SSCCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred cccccchhhHHHHHHHHHHh--hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHH
Confidence 11123334333333333332 2368999999999998877554 4589999888776532211100000000000
Q ss_pred ------------------ccccccCCC---CCH-------------------HHHHHHHhCChhhcccCCCCCeEEEEcc
Q 010654 393 ------------------AEWEEWGDP---WKE-------------------EFYFYMKSYSPVDNVKAQNYPHILVTAG 432 (505)
Q Consensus 393 ------------------~~~~~~g~~---~~~-------------------~~~~~~~~~sp~~~~~~~~~Pp~Li~~G 432 (505)
..+.....+ ... .....+...+....+.++++| +|+++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~G 220 (274)
T d1a8qa_ 142 ALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIP-TLVVHG 220 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSC-EEEEEE
T ss_pred HHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccce-eeeecc
Confidence 000000000 000 011111222333456778998 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHH
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMR 492 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~ 492 (505)
++|..+|++.+.+..+.+ -..+++++++ ++||.... ..++.+. ..+.+||.+
T Consensus 221 ~~D~~~~~~~~~~~~~~~---~~~~~~~~i~---~~gH~~~~~~~~p~~~~--~~i~~FL~k 274 (274)
T d1a8qa_ 221 DDDQVVPIDATGRKSAQI---IPNAELKVYE---GSSHGIAMVPGDKEKFN--RDLLEFLNK 274 (274)
T ss_dssp TTCSSSCGGGTHHHHHHH---STTCEEEEET---TCCTTTTTSTTHHHHHH--HHHHHHHTC
T ss_pred CCCCCcCHHHHHHHHHHh---CCCCEEEEEC---CCCCcccccccCHHHHH--HHHHHHHCc
Confidence 999999987765444333 2246788887 88996532 3333332 347788863
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.73 E-value=1.3e-17 Score=149.74 Aligned_cols=212 Identities=15% Similarity=0.125 Sum_probs=128.3
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.+.||++||.+++.. .|....+.|+++||.|+.+|+||+|........ ........++..++..+...+ .+
T Consensus 11 ~~~vvliHG~~~~~~--~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~ 81 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSA--DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVH----TGPDDWWQDVMNGYEFLKNKG---YE 81 (242)
T ss_dssp SCEEEEECCTTCCTH--HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTT----CCHHHHHHHHHHHHHHHHHHT---CC
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEEeCCCCccccccccc----cchhHHHHHHHHHHhhhhhcc---cC
Confidence 467889999876533 356667889999999999999999876543321 111233445555555555443 47
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC----------CCCCCccc----ccccCC--CCCHHH
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP----------TIPLTTAE----WEEWGD--PWKEEF 406 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----------~~~~~~~~----~~~~g~--~~~~~~ 406 (505)
++.++|+|+||.+++.++.++|......++.............. ........ ...+.. ......
T Consensus 82 ~~~l~G~S~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (242)
T d1tqha_ 82 KIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKA 161 (242)
T ss_dssp CEEEEEETHHHHHHHHHHTTSCCSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTHHH
T ss_pred ceEEEEcchHHHHhhhhcccCcccccccccccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhccchhhc
Confidence 89999999999999999999887655554433322110000000 00000000 000011 011110
Q ss_pred HHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC-hHHHHHHHHH
Q 010654 407 YFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-RFERLREAAF 485 (505)
Q Consensus 407 ~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~ 485 (505)
. .............++.| +|+++|++|..+|++.++++++.++. ..+++++++ ++||....+ .++.+ ...
T Consensus 162 ~-~~~~~~~~~~~~~~~~p-~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~gH~~~~~~~~~~~--~~~ 232 (242)
T d1tqha_ 162 L-QELIADVRDHLDLIYAP-TFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYE---QSGHVITLDQEKDQL--HED 232 (242)
T ss_dssp H-HHHHHHHHHTGGGCCSC-EEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEET---TCCSSGGGSTTHHHH--HHH
T ss_pred c-cccccccccccceeccc-cceeecccCCccCHHHHHHHHHHcCC--CCcEEEEEC---CCCCcCccccCHHHH--HHH
Confidence 0 00112234556677887 99999999999999999999887753 345788888 889975432 23333 235
Q ss_pred HHHHHHH
Q 010654 486 TYTFLMR 492 (505)
Q Consensus 486 ~~~fl~~ 492 (505)
+.+||++
T Consensus 233 i~~Fl~~ 239 (242)
T d1tqha_ 233 IYAFLES 239 (242)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8889875
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=9.9e-19 Score=154.84 Aligned_cols=194 Identities=16% Similarity=0.082 Sum_probs=121.8
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC-
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK- 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~- 319 (505)
.+|.+|++....|... ...|.||++||.+++...+........|+++||.|+++|+||.|.+...-. .....
T Consensus 13 v~G~~i~y~~~~~~~~----~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~---~~~~~~ 85 (208)
T d1imja_ 13 VQGQALFFREALPGSG----QARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAA---PAPIGE 85 (208)
T ss_dssp ETTEEECEEEEECSSS----CCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCC---SSCTTS
T ss_pred ECCEEEEEEEecCCCC----CCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCc---ccccch
Confidence 4898898765555432 456889999998754332111113467999999999999999875432110 01111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccC
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWG 399 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g 399 (505)
....+++.+.++.+ +.+++.|+|+|+||.+++.++.++|++++++|..+|+..- . +
T Consensus 86 ~~~~~~l~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~--------------~---~- 141 (208)
T d1imja_ 86 LAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD--------------K---I- 141 (208)
T ss_dssp CCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG--------------G---S-
T ss_pred hhhhhhhhhccccc------ccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccc--------------c---c-
Confidence 11223333333332 2368889999999999999999999999999998874210 0 0
Q ss_pred CCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 479 (505)
..+ ...++++| +|+++|++|+.+|.. .+ .++ .-...++++++ ++||....+.++.
T Consensus 142 ---~~~------------~~~~i~~P-~Lii~G~~D~~~~~~--~~---~~~-~~~~~~~~~i~---~~gH~~~~~~p~~ 196 (208)
T d1imja_ 142 ---NAA------------NYASVKTP-ALIVYGDQDPMGQTS--FE---HLK-QLPNHRVLIMK---GAGHPCYLDKPEE 196 (208)
T ss_dssp ---CHH------------HHHTCCSC-EEEEEETTCHHHHHH--HH---HHT-TSSSEEEEEET---TCCTTHHHHCHHH
T ss_pred ---ccc------------cccccccc-cccccCCcCcCCcHH--HH---HHH-hCCCCeEEEEC---CCCCchhhhCHHH
Confidence 111 12356777 999999999988643 22 222 22345677777 8899643233333
Q ss_pred HHHHHHHHHHHHH
Q 010654 480 LREAAFTYTFLMR 492 (505)
Q Consensus 480 ~~~~~~~~~fl~~ 492 (505)
+. ..+.+||.+
T Consensus 197 ~~--~~l~~Fl~~ 207 (208)
T d1imja_ 197 WH--TGLLDFLQG 207 (208)
T ss_dssp HH--HHHHHHHHT
T ss_pred HH--HHHHHHHhc
Confidence 32 356788763
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.73 E-value=4.9e-17 Score=151.90 Aligned_cols=226 Identities=16% Similarity=0.159 Sum_probs=135.8
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
.+|.+|+...+ + +...|.||++||.+.+.. .|.. ....|+++||.|+++|.||.|.+..... ...
T Consensus 7 ~g~~~i~y~~~---G----~~~~p~vvl~HG~~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~ 72 (297)
T d1q0ra_ 7 SGDVELWSDDF---G----DPADPALLLVMGGNLSAL--GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDF-----AAH 72 (297)
T ss_dssp ETTEEEEEEEE---S----CTTSCEEEEECCTTCCGG--GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCT-----TTS
T ss_pred ECCEEEEEEEe---c----CCCCCEEEEECCCCcChh--HHHHHHHHHHHhCCCEEEEEeCCCCcccccccc-----ccc
Confidence 35667754422 1 134588999999865433 2433 4567889999999999999987643221 111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------cc-CC---CC
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------ML-DP---TI 388 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------~~-~~---~~ 388 (505)
...++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++++.++....... .. .. ..
T Consensus 73 ~~~~~~~~~d~~~ll~~--l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (297)
T d1q0ra_ 73 PYGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGL 150 (297)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCS
T ss_pred ccccchhhhhhcccccc--ccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhh
Confidence 23456665555555443 23468999999999999999999999999999887664321100 00 00 00
Q ss_pred CCCcccc----------------------------cccCCCCCHHHHH-HHH----------------------hCChhh
Q 010654 389 PLTTAEW----------------------------EEWGDPWKEEFYF-YMK----------------------SYSPVD 417 (505)
Q Consensus 389 ~~~~~~~----------------------------~~~g~~~~~~~~~-~~~----------------------~~sp~~ 417 (505)
+.....+ .....+.+..... +.. ..+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (297)
T d1q0ra_ 151 PGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA 230 (297)
T ss_dssp CCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGG
T ss_pred hhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchh
Confidence 0000000 0001111111111 000 001123
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.++++++| +|+++|++|..+|+..++++.+.+. ..++++++ ++||......++.+.. .+.+||..
T Consensus 231 ~l~~i~~P-vlvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~---~~gH~~~~e~p~~~~~--~i~~~l~~ 295 (297)
T d1q0ra_ 231 ELREVTVP-TLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIP---GMGHALPSSVHGPLAE--VILAHTRS 295 (297)
T ss_dssp GGGGCCSC-EEEEEETTCSSSCTTHHHHHHHTST----TEEEEEET---TCCSSCCGGGHHHHHH--HHHHHHHH
T ss_pred hhhccCCc-eEEEEeCCCCCCCHHHHHHHHHhCC----CCEEEEEC---CCCCcchhhCHHHHHH--HHHHHHHh
Confidence 45677898 9999999999999999888876653 34677787 8899876655554332 45566543
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.72 E-value=1.1e-17 Score=161.73 Aligned_cols=140 Identities=20% Similarity=0.183 Sum_probs=96.1
Q ss_pred CceEEEEEEECCCCceeeEEEEE-eCCccCCCCCCcEEEEEcCCCCcCCCCCC----chhHHHHHHCCcEEEEEcccCCC
Q 010654 230 NYFTERKWASASDGTQIPICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAF----NSSRLSLLDRGFIFAIAQIRGGG 304 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~-p~~~~~~~~~~P~iv~~hGg~~~~~~~~~----~~~~~~l~~~G~~v~~~d~rG~~ 304 (505)
.|+.|...+++.||..|..+-+. ++......++.|+||++||.+++...+.. ......|+++||.|+++|.||.|
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G 103 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCC
Confidence 56778889999999888665332 22221345677999999998765443221 12456889999999999999998
Q ss_pred CCchhHHHcc-ccc-----CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEE
Q 010654 305 ELGRQWYENG-KFL-----KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 371 (505)
Q Consensus 305 ~~g~~~~~~~-~~~-----~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v 371 (505)
.....-.... ... .......|+.++++++.+.-. .+++.++|||+||.+++.++.++|+.++.++
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g--~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~ 174 (377)
T d1k8qa_ 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFSTNPKLAKRIK 174 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHHCHHHHTTEE
T ss_pred CCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcC--CCCEEEEEecchHHHHHHHHHhhhhhhhhce
Confidence 7643110000 000 011345788899999877632 3689999999999999999999988655443
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.71 E-value=8.4e-18 Score=155.98 Aligned_cols=230 Identities=17% Similarity=0.208 Sum_probs=133.2
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
|...||.+|+.... .. .+..|+||++||+++.... |......++++||.|+++|+||.|.+...-. ...
T Consensus 6 ~~~~~g~~i~y~~~-g~-----~~~~~~iv~lHG~~g~~~~--~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~---~~~ 74 (290)
T d1mtza_ 6 YAKVNGIYIYYKLC-KA-----PEEKAKLMTMHGGPGMSHD--YLLSLRDMTKEGITVLFYDQFGCGRSEEPDQ---SKF 74 (290)
T ss_dssp EEEETTEEEEEEEE-CC-----SSCSEEEEEECCTTTCCSG--GGGGGGGGGGGTEEEEEECCTTSTTSCCCCG---GGC
T ss_pred eEEECCEEEEEEEc-CC-----CCCCCeEEEECCCCCchHH--HHHHHHHHHHCCCEEEEEeCCCCcccccccc---ccc
Confidence 34458988865432 21 1235889999998765432 4444556788999999999999987532100 000
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh------ccCCCC---
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT------MLDPTI--- 388 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~------~~~~~~--- 388 (505)
.-....+|+.+.++.+. ..+++.++|||+||.+++.++.++|+++++++...++...... +.....
T Consensus 75 ~~~~~~~~l~~ll~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (290)
T d1mtza_ 75 TIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKY 149 (290)
T ss_dssp SHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHH
T ss_pred cccchhhhhhhhhcccc-----cccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHH
Confidence 11123344444444432 1268999999999999999999999999999988775421110 000000
Q ss_pred -----------CCCcccc--------cc--cCCC-CCHHHHHHH---H---------------------hCChhhcccCC
Q 010654 389 -----------PLTTAEW--------EE--WGDP-WKEEFYFYM---K---------------------SYSPVDNVKAQ 422 (505)
Q Consensus 389 -----------~~~~~~~--------~~--~g~~-~~~~~~~~~---~---------------------~~sp~~~~~~~ 422 (505)
......+ .. .... ..++....+ . ..+......++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (290)
T d1mtza_ 150 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAI 229 (290)
T ss_dssp HHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGC
T ss_pred HHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcc
Confidence 0000000 00 0011 111111110 0 01122345566
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
++| +|+++|++|..+| ..+.++.+.+. ..++++++ ++||....+.++.+. ..+.+||.+||
T Consensus 230 ~~P-~l~i~G~~D~~~~-~~~~~~~~~~~----~~~~~~~~---~~gH~~~~e~p~~~~--~~i~~FL~~h~ 290 (290)
T d1mtza_ 230 KIP-TLITVGEYDEVTP-NVARVIHEKIA----GSELHVFR---DCSHLTMWEDREGYN--KLLSDFILKHL 290 (290)
T ss_dssp CSC-EEEEEETTCSSCH-HHHHHHHHHST----TCEEEEET---TCCSCHHHHSHHHHH--HHHHHHHHTCC
T ss_pred cce-EEEEEeCCCCCCH-HHHHHHHHHCC----CCEEEEEC---CCCCchHHhCHHHHH--HHHHHHHHHhC
Confidence 888 9999999998765 45655555543 45678887 889976433444333 35788999875
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.70 E-value=1.5e-17 Score=146.70 Aligned_cols=183 Identities=17% Similarity=0.133 Sum_probs=119.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHH-----
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK----- 335 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~----- 335 (505)
++.|+||++||+.+.. ..|....+.++ .++.|+.++.+..++....+. ........+..|+...++.+..
T Consensus 15 ~~~P~vi~lHG~G~~~--~~~~~~~~~l~-~~~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDE--NQFFDFGARLL-PQATILSPVGDVSEHGAARFF--RRTGEGVYDMVDLERATGKMADFIKAN 89 (203)
T ss_dssp TTSCEEEEECCTTCCH--HHHHHHHHHHS-TTSEEEEECCSEEETTEEESS--CBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCH--HHHHHHHHHhc-cCCeEEEeccccccccccccc--cccCccccchhHHHHHHHHHHHHHHHh
Confidence 5589999999975432 12333333443 467888886543322111111 0111222333444443333322
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 415 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 415 (505)
...+|+++|+++|+|+||.+++.++..+|+.+.++++.+|..... .. ..
T Consensus 90 ~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~------~~----------~~--------------- 138 (203)
T d2r8ba1 90 REHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFE------PK----------IS--------------- 138 (203)
T ss_dssp HHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSC------CC----------CC---------------
T ss_pred hhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccc------cc----------cc---------------
Confidence 123688999999999999999999999999999999998854310 00 00
Q ss_pred hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 416 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 416 ~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
...... |++++||++|++||++++++++++|++.|+++++++|+ + ||++. .+ ....+.+||.++
T Consensus 139 ---~~~~~~-~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~---g-gH~~~---~~---~~~~~~~wl~~~ 202 (203)
T d2r8ba1 139 ---PAKPTR-RVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHP---G-GHEIR---SG---EIDAVRGFLAAY 202 (203)
T ss_dssp ---CCCTTC-EEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEES---S-CSSCC---HH---HHHHHHHHHGGG
T ss_pred ---cccccc-hhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEEC---C-CCcCC---HH---HHHHHHHHHHhc
Confidence 001123 59999999999999999999999999999999998886 4 79864 22 233478899765
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.70 E-value=2e-16 Score=144.97 Aligned_cols=226 Identities=20% Similarity=0.199 Sum_probs=135.1
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
+|.+.||.+|+... . +..|.||++||++++.. .|......|+++||.|+.+|+||.|.....
T Consensus 2 ~f~~~dG~~l~y~~---~------G~g~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~------- 63 (271)
T d1va4a_ 2 TFVAKDGTQIYFKD---W------GSGKPVLFSHGWLLDAD--MWEYQMEYLSSRGYRTIAFDRRGFGRSDQP------- 63 (271)
T ss_dssp EEECTTSCEEEEEE---E------SSSSEEEEECCTTCCGG--GGHHHHHHHHTTTCEEEEECCTTSTTSCCC-------
T ss_pred EEEeECCeEEEEEE---E------cCCCeEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEEecccccccccc-------
Confidence 57788999886431 1 22466889999876432 366667788899999999999998865321
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHH-HHHhhCCCceeEEEecCCchhhhhhccC--CCCCCC--
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG-AVLNMRPDLFKAAVAAVPFVDVLTTMLD--PTIPLT-- 391 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~-~~~~~~p~~~~a~v~~~~~~d~~~~~~~--~~~~~~-- 391 (505)
.....++++...+..+.+. ++.+++.++|+|+||.+++ .++.++|++++..+...+.......... ......
T Consensus 64 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 140 (271)
T d1va4a_ 64 -WTGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVF 140 (271)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHH
T ss_pred -ccccccccccccceeeeee--cCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHH
Confidence 1223445555555544443 2346888999999887654 5566789999998887664321110000 000000
Q ss_pred --------------cccc--cccC----CCCCH-------------------HHHHHHHhCChhhcccCCCCCeEEEEcc
Q 010654 392 --------------TAEW--EEWG----DPWKE-------------------EFYFYMKSYSPVDNVKAQNYPHILVTAG 432 (505)
Q Consensus 392 --------------~~~~--~~~g----~~~~~-------------------~~~~~~~~~sp~~~~~~~~~Pp~Li~~G 432 (505)
...+ ..++ ..... .....+...+....+.+++.| +|+++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~g 219 (271)
T d1va4a_ 141 ARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVP-TLVIHG 219 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSC-EEEEEE
T ss_pred HHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccc-eeeccc
Confidence 0000 0000 00000 001111223333456677888 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++|..+|+..+.++.+.+. ..+++++++ ++||....+.++.+. ..+.+||+|
T Consensus 220 ~~D~~~~~~~~~~~~~~~~---~~~~~~~~~---~~gH~~~~e~p~~~~--~~i~~fL~k 271 (271)
T d1va4a_ 220 DGDQIVPFETTGKVAAELI---KGAELKVYK---DAPHGFAVTHAQQLN--EDLLAFLKR 271 (271)
T ss_dssp TTCSSSCGGGTHHHHHHHS---TTCEEEEET---TCCTTHHHHTHHHHH--HHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHhC---CCCEEEEEC---CCCCchHHhCHHHHH--HHHHHHHCc
Confidence 9999999999888876653 245678887 889975433343332 347788753
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.70 E-value=1.9e-16 Score=145.74 Aligned_cols=227 Identities=19% Similarity=0.197 Sum_probs=131.2
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
++++.||.+|+...+-|+ ..|+||++||.++... .|......|+++||.|+.+|+||.|.....
T Consensus 2 ~i~~~dG~~l~y~~~G~~-------~~~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~------- 65 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPR-------DGLPVVFHHGWPLSAD--DWDNQMLFFLSHGYRVIAHDRRGHGRSDQP------- 65 (275)
T ss_dssp EEECTTSCEEEEEEESCT-------TSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EEEecCCCEEEEEEecCC-------CCCeEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEEecccccccccc-------
Confidence 467899999976544332 2477899999876433 366667789999999999999998865421
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeCh-HHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc---
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSA-GGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT--- 392 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~-GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--- 392 (505)
.....++++.+.+..+++. .+.+++.++|+|+ ||.++..++.++|++++.++...+.................
T Consensus 66 -~~~~~~~~~~~~~~~~l~~--l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 142 (275)
T d1a88a_ 66 -STGHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVF 142 (275)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHH
T ss_pred -ccccccccccccccccccc--ccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhh
Confidence 1112334444433333332 1336778889887 55566667788999999988876532110000000000000
Q ss_pred ------------c--------cccccC--CC-CCHHH----------------H---HHHHhCChhhcccCCCCCeEEEE
Q 010654 393 ------------A--------EWEEWG--DP-WKEEF----------------Y---FYMKSYSPVDNVKAQNYPHILVT 430 (505)
Q Consensus 393 ------------~--------~~~~~g--~~-~~~~~----------------~---~~~~~~sp~~~~~~~~~Pp~Li~ 430 (505)
. .+..+. .. ..... + ..+...+....+.++++| +|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l~i 221 (275)
T d1a88a_ 143 DEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP-VLVA 221 (275)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSC-EEEE
T ss_pred hhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccc-ccee
Confidence 0 000000 00 01110 0 111122223445677898 9999
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 431 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 431 ~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+|++|..+|+.++.+...++ ..++++++++ ++||....+.++.+. ..+.+||+
T Consensus 222 ~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~---~~gH~~~~e~p~~~~--~~i~~Fl~ 274 (275)
T d1a88a_ 222 HGTDDQVVPYADAAPKSAEL---LANATLKSYE---GLPHGMLSTHPEVLN--PDLLAFVK 274 (275)
T ss_dssp EETTCSSSCSTTTHHHHHHH---STTEEEEEET---TCCTTHHHHCHHHHH--HHHHHHHH
T ss_pred ecCCCCCcCHHHHHHHHHHh---CCCCEEEEEC---CCCCchHHhCHHHHH--HHHHHHHc
Confidence 99999999988766554443 2245678887 889976444444332 35777875
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.69 E-value=8e-16 Score=141.31 Aligned_cols=225 Identities=17% Similarity=0.151 Sum_probs=133.2
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
+|++.||.+|+.... ++.|.||++||.++... .|......|+++||.|+.+|.||.|.....
T Consensus 2 ~f~~~dG~~i~y~~~---------G~g~pvvllHG~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~------- 63 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW---------GSGQPIVFSHGWPLNAD--SWESQMIFLAAQGYRVIAHDRRGHGRSSQP------- 63 (273)
T ss_dssp EEECTTSCEEEEEEE---------SCSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EEEeeCCcEEEEEEE---------CCCCeEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEEechhcCccccc-------
Confidence 578899998865421 23466889999876433 366667788999999999999999875421
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHH-HHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc---
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG-AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT--- 392 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~-~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--- 392 (505)
.....++++.+.+..+++.- +.++..++|+|+||.+++ .++..+|++++.++...+.................
T Consensus 64 -~~~~~~~~~~~~~~~~l~~l--~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T d1a8sa_ 64 -WSGNDMDTYADDLAQLIEHL--DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVF 140 (273)
T ss_dssp -SSCCSHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH
T ss_pred -cccccccchHHHHHHHHHhc--CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhh
Confidence 11234455555444444432 335678899999876554 45566799988887765532111000000000000
Q ss_pred --------------------ccccccCCC---CCHH-------------------HHHHHHhCChhhcccCCCCCeEEEE
Q 010654 393 --------------------AEWEEWGDP---WKEE-------------------FYFYMKSYSPVDNVKAQNYPHILVT 430 (505)
Q Consensus 393 --------------------~~~~~~g~~---~~~~-------------------~~~~~~~~sp~~~~~~~~~Pp~Li~ 430 (505)
..+.....+ .... ....+...+....+.++++| +|++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vlii 219 (273)
T d1a8sa_ 141 DGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVP-TLVV 219 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSC-EEEE
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccc-eEEE
Confidence 000000000 1111 11112233444566788898 9999
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 431 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 431 ~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+|++|..+|+..+.++.+.+. ..+++++++ ++||....+.++.+. ..+.+||.
T Consensus 220 ~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~---~~gH~~~~e~p~~~~--~~i~~Fl~ 272 (273)
T d1a8sa_ 220 HGDADQVVPIEASGIASAALV---KGSTLKIYS---GAPHGLTDTHKDQLN--ADLLAFIK 272 (273)
T ss_dssp EETTCSSSCSTTTHHHHHHHS---TTCEEEEET---TCCSCHHHHTHHHHH--HHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHhC---CCCEEEEEC---CCCCchHHhCHHHHH--HHHHHHcC
Confidence 999999999988888776653 245677887 889976443444332 34677874
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.69 E-value=4.6e-15 Score=146.22 Aligned_cols=201 Identities=16% Similarity=0.185 Sum_probs=152.1
Q ss_pred CCCCCceEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-------ceeee
Q 010654 3 EILRPDKAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE-------ELRVL 72 (505)
Q Consensus 3 ~~~r~~~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-------~~~~l 72 (505)
+.+||.+||+|++||++.++++++++.+ +.|.++...|+||+++++..... ..+.+|++|+.... .+.++
T Consensus 203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 282 (430)
T d1qfma1 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (430)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEe
Confidence 5789999999999999999999999876 45777888999999998886654 35689999976543 12344
Q ss_pred eccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCC-ceeeEEEEeCCEEEEEEecCCeeEE
Q 010654 73 TPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRES-VKLQDIQLFIDHLAVYEREGGLQKI 149 (505)
Q Consensus 73 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~-~~i~~~~~~~d~l~~~~~~~~~~~l 149 (505)
.....+..+.+.++|+.||+.++. ++++++|+.++++.+....| ++++... ..+..+...++.+++...+++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~Tn~-~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l 361 (430)
T d1qfma1 283 IDNFEGEYDYVTNEGTVFTFKTNR-HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTL 361 (430)
T ss_dssp ECSSSSCEEEEEEETTEEEEEECT-TCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred ecccccceEEEecCCceeecccCc-ccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEE
Confidence 444444445577899999999997 56889999999987665666 6765543 4445666778899999999999999
Q ss_pred EEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 150 TTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.++++.. +.. ..+.++. .+++.+.+.+++++.+.|.++|+++|+.+|.+|+.+++
T Consensus 362 ~v~~~~~--~~~------~~~~~~~-~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~ 416 (430)
T d1qfma1 362 QLHDLAT--GAL------LKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (430)
T ss_dssp EEEETTT--CCE------EEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEECCC--CcE------EEecCCC-CceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence 9999863 322 1222222 23343445567788899999999999999999999886
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=4.2e-17 Score=141.65 Aligned_cols=162 Identities=15% Similarity=0.132 Sum_probs=105.2
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
..||++||..++.....+....+.|+++||.|+.+|++|++.. ..+|....++.+. ....++
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~---------------~~~~~~~~l~~~~---~~~~~~ 63 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP---------------RLEDWLDTLSLYQ---HTLHEN 63 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC---------------CHHHHHHHHHTTG---GGCCTT
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc---------------hHHHHHHHHHHHH---hccCCC
Confidence 3689999976654433344556789999999999999987642 2344444444333 334578
Q ss_pred EEEEeeChHHHHHHHHHhhCCCce--eEEEecCCchhhhhhccCCCCCCCccccccc-CCCCCHHHHHHHHhCChhhccc
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLF--KAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVK 420 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~--~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~ 420 (505)
+.++|+|+||++++.++.++++.. .++++.++....... .. ....+ ..+..... ..
T Consensus 64 ~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~------------~~ 122 (186)
T d1uxoa_ 64 TYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT--------LQ-MLDEFTQGSFDHQK------------II 122 (186)
T ss_dssp EEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT--------CG-GGGGGTCSCCCHHH------------HH
T ss_pred cEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchh--------hh-hhhhhhcccccccc------------cc
Confidence 999999999999999999988643 444444444321110 00 00111 11111111 11
Q ss_pred CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 421 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 421 ~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
++.. |+|++||++|++||+++++++++++. .+++.++ ++||...
T Consensus 123 ~~~~-p~lvi~g~~D~~vp~~~~~~l~~~~~-----~~~~~~~---~~gH~~~ 166 (186)
T d1uxoa_ 123 ESAK-HRAVIASKDDQIVPFSFSKDLAQQID-----AALYEVQ---HGGHFLE 166 (186)
T ss_dssp HHEE-EEEEEEETTCSSSCHHHHHHHHHHTT-----CEEEEET---TCTTSCG
T ss_pred cCCC-CEEEEecCCCCCCCHHHHHHHHHHcC-----CEEEEeC---CCCCcCc
Confidence 1234 59999999999999999999998772 4678887 8899653
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.68 E-value=1.6e-16 Score=145.92 Aligned_cols=224 Identities=18% Similarity=0.178 Sum_probs=130.1
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
..||.+++.. .. ++.|.||++||+++.... ..|......| ++||.|+.+|.||+|..... .
T Consensus 8 ~~dg~~l~y~---~~------G~g~~vvllHG~~~~~~~~~~~~~~~~~l-~~~~~v~~~D~~G~G~S~~~--------~ 69 (268)
T d1j1ia_ 8 NAGGVETRYL---EA------GKGQPVILIHGGGAGAESEGNWRNVIPIL-ARHYRVIAMDMLGFGKTAKP--------D 69 (268)
T ss_dssp EETTEEEEEE---EE------CCSSEEEEECCCSTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCC--------S
T ss_pred EECCEEEEEE---EE------cCCCeEEEECCCCCCccHHHHHHHHHHHH-hcCCEEEEEcccccccccCC--------c
Confidence 3589888643 11 234678899998654322 1233333444 56999999999999865321 1
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc--cCCC--CCCCccc
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--LDPT--IPLTTAE 394 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~--~~~~--~~~~~~~ 394 (505)
.....++....+..+++.-.+ .+++.++|+|+||.+++.++.++|++++.+|...|..-..... .... .......
T Consensus 70 ~~~~~~~~~~~~~~~i~~l~~-~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (268)
T d1j1ia_ 70 IEYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREG 148 (268)
T ss_dssp SCCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHH
T ss_pred cccccccccccchhhHHHhhh-cccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhh
Confidence 122344444444444443222 2578899999999999999999999999998876632111000 0000 0000000
Q ss_pred c----cc-cC--CCCCHHH--------------------HHHHHh----CChhhcccCCCCCeEEEEccCCCCCCCCChH
Q 010654 395 W----EE-WG--DPWKEEF--------------------YFYMKS----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEP 443 (505)
Q Consensus 395 ~----~~-~g--~~~~~~~--------------------~~~~~~----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~ 443 (505)
. .. .. ....... ...+.. .+....+.++++| +|+++|++|..+|++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l~i~G~~D~~~~~~~~ 227 (268)
T d1j1ia_ 149 MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVP-TLVVQGKDDKVVPVETA 227 (268)
T ss_dssp HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSC-EEEEEETTCSSSCHHHH
T ss_pred hHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCC-EEEEEeCCCCCCCHHHH
Confidence 0 00 00 0000000 000010 1112346677888 99999999999999888
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 444 AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 444 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.++.+.+. .+++++++ ++||....+.++.+. ..+.+||.+
T Consensus 228 ~~~~~~~~----~~~~~~~~---~~gH~~~~e~p~~~~--~~i~~FL~~ 267 (268)
T d1j1ia_ 228 YKFLDLID----DSWGYIIP---HCGHWAMIEHPEDFA--NATLSFLSL 267 (268)
T ss_dssp HHHHHHCT----TEEEEEES---SCCSCHHHHSHHHHH--HHHHHHHHH
T ss_pred HHHHHhCC----CCEEEEEC---CCCCchHHhCHHHHH--HHHHHHHcC
Confidence 88777664 35678887 889976433344333 357889876
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.68 E-value=1.7e-16 Score=146.00 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=133.5
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
..+|.++++.. . +..|.||++||.++.... ..|......| ++||.|+.+|.||.|..... ..
T Consensus 9 ~~~G~~~~Y~~-----~----G~G~pvvllHG~~~~~~~~~~~~~~~~~l-~~~~~vi~~Dl~G~G~S~~~-------~~ 71 (271)
T d1uk8a_ 9 LAAGVLTNYHD-----V----GEGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRP-------EN 71 (271)
T ss_dssp EETTEEEEEEE-----E----CCSSEEEEECCCSTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCC-------TT
T ss_pred EECCEEEEEEE-----E----eeCCeEEEECCCCCCccHHHHHHHHHHHH-hCCCEEEEEeCCCCCCcccc-------cc
Confidence 45888886541 1 234678899997654322 1122333444 57999999999999875431 11
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh------hhhccCCCCCCC-
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV------LTTMLDPTIPLT- 391 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~------~~~~~~~~~~~~- 391 (505)
....+++....+..+.+.- +.+++.++|||+||.+++.++.++|++++++|...+.... ...... ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~-~~~~~~ 148 (271)
T d1uk8a_ 72 YNYSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWG-YTPSIE 148 (271)
T ss_dssp CCCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHT-CCSCHH
T ss_pred ccccccccchhhhhhhhhh--cCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhh-ccchhH
Confidence 2234566666666666553 3468999999999999999999999999999887654211 000000 00000
Q ss_pred ----------------cccc-----cccCCCCCHHHH---------HHH-HhCChhhcccCCCCCeEEEEccCCCCCCCC
Q 010654 392 ----------------TAEW-----EEWGDPWKEEFY---------FYM-KSYSPVDNVKAQNYPHILVTAGLNDPRVMY 440 (505)
Q Consensus 392 ----------------~~~~-----~~~g~~~~~~~~---------~~~-~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~ 440 (505)
.... .....+...+.+ .++ ........+.++++| +|+++|++|..+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~ 227 (271)
T d1uk8a_ 149 NMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNE-TLIIHGREDQVVPL 227 (271)
T ss_dssp HHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSC-EEEEEETTCSSSCH
T ss_pred HHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccc-eeEEecCCCCCcCH
Confidence 0000 000000000000 000 112223456778898 99999999999999
Q ss_pred ChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 441 SEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 441 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
..+..+.+.+. ..++++++ ++||....+.++.+ ...+.+||.+
T Consensus 228 ~~~~~~~~~~~----~~~~~~~~---~~gH~~~~e~p~~~--~~~i~~Fl~e 270 (271)
T d1uk8a_ 228 SSSLRLGELID----RAQLHVFG---RCGHWTQIEQTDRF--NRLVVEFFNE 270 (271)
T ss_dssp HHHHHHHHHCT----TEEEEEES---SCCSCHHHHTHHHH--HHHHHHHHHT
T ss_pred HHHHHHHHhCC----CCEEEEEC---CCCCchHHHCHHHH--HHHHHHHHhc
Confidence 88888877664 34678887 88997543344433 2357888875
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=4.7e-16 Score=146.79 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=85.9
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+...||.+|++... +..|+||++||.+++.. .|......|+++||.|+.+|.||.|..... ..
T Consensus 16 v~~~~g~~i~y~~~---------G~gp~vlllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~------~~ 78 (322)
T d1zd3a2 16 VTVKPRVRLHFVEL---------GSGPAVCLCHGFPESWY--SWRYQIPALAQAGYRVLAMDMKGYGESSAP------PE 78 (322)
T ss_dssp EEEETTEEEEEEEE---------CCSSEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEEECTTSTTSCCC------SC
T ss_pred EEECCCCEEEEEEE---------cCCCeEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEeccccccccccc------cc
Confidence 45568988875421 23488999999876543 366667889999999999999998864321 11
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
.....+++....+..++++ .+.+++.++|||+||.+++.++.++|+++++++..++
T Consensus 79 ~~~~~~~~~~~~i~~l~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 134 (322)
T d1zd3a2 79 IEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT 134 (322)
T ss_dssp GGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred cccccccccchhhhhhhhc--ccccccccccccchHHHHHHHHHhCCccccceEEEcc
Confidence 1123455655555555554 2346899999999999999999999999999887653
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.67 E-value=4.9e-16 Score=138.44 Aligned_cols=191 Identities=15% Similarity=0.133 Sum_probs=119.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEccc------CCCCCchhHHHcccc-cCCcchHHHHH---H
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIR------GGGELGRQWYENGKF-LKKKNTFTDFI---A 328 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~r------G~~~~g~~~~~~~~~-~~~~~~~~D~~---~ 328 (505)
.+.|+||++||..+.. ..|......|.+. ++.++.++-+ +.+..+..|...... .......+++. .
T Consensus 12 ~~~~~Vi~lHG~G~~~--~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T d1auoa_ 12 PADACVIWLHGLGADR--YDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp CCSEEEEEECCTTCCT--TTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCh--hhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHH
Confidence 3468999999964432 2355445566554 4556655421 111112233321111 11222333333 3
Q ss_pred HHHHHHH---cCCCCCCcEEEEeeChHHHHHHHHH-hhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCH
Q 010654 329 CAEYLIK---NCYCTKEKLCIEGRSAGGLLIGAVL-NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKE 404 (505)
Q Consensus 329 ~~~~l~~---~~~~d~~rv~i~G~S~GG~~~~~~~-~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~ 404 (505)
.+..+++ +..+|++|++++|+|+||.+++.++ .+.+..++++++.++....... . .+...
T Consensus 90 ~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~----~------------~~~~~ 153 (218)
T d1auoa_ 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD----E------------LELSA 153 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCT----T------------CCCCH
T ss_pred HHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccc----c------------cccch
Confidence 3333322 2457999999999999999998875 4456789999998874321100 0 00011
Q ss_pred HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHH
Q 010654 405 EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAA 484 (505)
Q Consensus 405 ~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 484 (505)
. ..++| +|++||+.|.+||+++++++++.|+++|.++++..|+ .||... .+ .+.
T Consensus 154 ~---------------~~~~p-vl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~----~gH~i~---~~---~~~ 207 (218)
T d1auoa_ 154 S---------------QQRIP-ALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP----MGHEVL---PQ---EIH 207 (218)
T ss_dssp H---------------HHTCC-EEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES----CSSSCC---HH---HHH
T ss_pred h---------------ccCCC-EEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC----CCCccC---HH---HHH
Confidence 1 11355 9999999999999999999999999999999988885 479754 22 234
Q ss_pred HHHHHHHHhhC
Q 010654 485 FTYTFLMRALS 495 (505)
Q Consensus 485 ~~~~fl~~~l~ 495 (505)
.+.+||.++||
T Consensus 208 ~i~~wl~~~lg 218 (218)
T d1auoa_ 208 DIGAWLAARLG 218 (218)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 58999999886
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=8.6e-17 Score=149.27 Aligned_cols=226 Identities=13% Similarity=0.107 Sum_probs=142.0
Q ss_pred ceEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCC
Q 010654 231 YFTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGEL 306 (505)
Q Consensus 231 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~ 306 (505)
+.++.++++|+ -|..|+..+ +. +++|+|+++||.++......|.. ..+.+.++|++|++|+-...+ +
T Consensus 4 ~~v~~~~~~s~~~~r~i~~~~--~~------~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~-~ 74 (280)
T d1dqza_ 4 LPVEYLQVPSASMGRDIKVQF--QG------GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSS-F 74 (280)
T ss_dssp SCEEEEEEEETTTTEEEEEEE--EC------CSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTC-T
T ss_pred cEEEEEEEecccCCCcceEEe--eC------CCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCC-c
Confidence 46677777654 577787764 22 45799999999765433333332 235777889999999953332 2
Q ss_pred chhHHHcccc--cCCcchHHH--HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 307 GRQWYENGKF--LKKKNTFTD--FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 307 g~~~~~~~~~--~~~~~~~~D--~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
...|...... ..+...+++ +.+.+.++.++..+|++|++|+|+||||++++.++.++|++|+++++.+|..+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~~~ 154 (280)
T d1dqza_ 75 YTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSES 154 (280)
T ss_dssp TSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTST
T ss_pred CccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcccC
Confidence 2333322111 111223333 235667777776789999999999999999999999999999999999998764221
Q ss_pred ccCCCCC-----CCcccc-cccCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCCCCCC--------------
Q 010654 383 MLDPTIP-----LTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDPRVMY-------------- 440 (505)
Q Consensus 383 ~~~~~~~-----~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~~vp~-------------- 440 (505)
....... ...... ..+|.+.++. ..+.+|...++++ +.+++++.+|..|...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~e~~~~ 230 (280)
T d1dqza_ 155 WWPTLIGLAMNDSGGYNANSMWGPSSDPA----WKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTL 230 (280)
T ss_dssp THHHHHHHHHHHTTSCCHHHHHCSTTSHH----HHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHH
T ss_pred cchhhhhhhHhhccCCCHhhccCCcchhh----hhhcCHHHHHHHhhhcCCeEEEEeCCCCCccccccccccchhhHHHH
Confidence 0000000 000000 1134443332 2567888776655 223599999998876553
Q ss_pred ChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 441 SEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 441 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
.++.++.++|++++.....+.++ .+++|.
T Consensus 231 ~~~~~~~~~l~~~g~~~~~~~~~--~~GgH~ 259 (280)
T d1dqza_ 231 RTNQTFRDTYAADGGRNGVFNFP--PNGTHS 259 (280)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECC--SCCCSS
T ss_pred HHHHHHHHHHHHcCCCeEEEEEc--CCCccC
Confidence 34678889999998876555554 256795
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.66 E-value=3.7e-16 Score=144.77 Aligned_cols=210 Identities=12% Similarity=0.133 Sum_probs=123.0
Q ss_pred CCcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
..|+||++||.+.+...+. +......++++||.|+.+|.||+|...... .......+..+.+..+++. .+
T Consensus 29 ~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~i~~li~~--l~ 99 (283)
T d2rhwa1 29 NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVV-------MDEQRGLVNARAVKGLMDA--LD 99 (283)
T ss_dssp CSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCC-------CSSCHHHHHHHHHHHHHHH--HT
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc-------ccccccchhhhhccccccc--cc
Confidence 3478999999865543211 112234677899999999999988653311 1111222222233333332 12
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC-------------Ccccc----cccC-C-C
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL-------------TTAEW----EEWG-D-P 401 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~-------------~~~~~----~~~g-~-~ 401 (505)
.+++.++|||+||.+++.++.++|++++++|+..|..-...... ..+. ....+ ..+. . .
T Consensus 100 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (283)
T d2rhwa1 100 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFA--PMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQS 177 (283)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSS--CSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGG
T ss_pred ccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhh--hhhHHHHHHHHHHhhhhhhhhHHHHHHHhhcccc
Confidence 36899999999999999999999999999998876321100000 0000 00000 0000 0 0
Q ss_pred -CCHHH----HHHHH-------------------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 402 -WKEEF----YFYMK-------------------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 402 -~~~~~----~~~~~-------------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
..++. +..+. ..+....+.++++| +|+++|+.|..+|+..+.++++.+. .+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~~----~~ 252 (283)
T d2rhwa1 178 LITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAK-TFITWGRDDRFVPLDHGLKLLWNID----DA 252 (283)
T ss_dssp GCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSC-EEEEEETTCSSSCTHHHHHHHHHSS----SE
T ss_pred cCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCC-EEEEEeCCCCCcCHHHHHHHHHhCC----CC
Confidence 11110 00000 11223456677898 9999999999999999988877764 35
Q ss_pred CeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 458 NILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++++++ ++||....+.++.+ ...+.+||.+
T Consensus 253 ~~~~i~---~~gH~~~~e~p~~~--~~~i~~FLk~ 282 (283)
T d2rhwa1 253 RLHVFS---KCGHWAQWEHADEF--NRLVIDFLRH 282 (283)
T ss_dssp EEEEES---SCCSCHHHHTHHHH--HHHHHHHHHH
T ss_pred EEEEEC---CCCCchHHhCHHHH--HHHHHHHHhC
Confidence 678887 88997543334433 2357788865
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.65 E-value=5.1e-16 Score=140.52 Aligned_cols=211 Identities=13% Similarity=0.082 Sum_probs=128.0
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|+++||.|+.+|+||+|.+.... .....+.+....+..+...... ..
T Consensus 2 G~~vvllHG~~~~~~--~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~ 71 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW--SWYKLKPLLEAAGHKVTALDLAASGTDLRKI-------EELRTLYDYTLPLMELMESLSA-DE 71 (258)
T ss_dssp CCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEECCCTTSTTCCCCG-------GGCCSHHHHHHHHHHHHHTSCS-SS
T ss_pred CCcEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-------CCCcchHHHHHHHhhhhhcccc-cc
Confidence 368899999876543 3667778999999999999999998764321 1112344544444444444333 25
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--------hcc--CCCCCCCccc-------------c---c
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------TML--DPTIPLTTAE-------------W---E 396 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~--~~~~~~~~~~-------------~---~ 396 (505)
++.++|||+||.+++.++.++|++++.++...+...... ... .......... . .
T Consensus 72 ~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T d1xkla_ 72 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 151 (258)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred cccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccH
Confidence 788999999999999999999999999988766421100 000 0000000000 0 0
Q ss_pred c-----cCCCCCHHHHH--------------HHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 397 E-----WGDPWKEEFYF--------------YMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 397 ~-----~g~~~~~~~~~--------------~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
+ .......+... .+...........+++| +++++|++|..+|++.++.+++.+. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 226 (258)
T d1xkla_ 152 KFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVK-RVYIVCTEDKGIPEEFQRWQIDNIG----VT 226 (258)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSC-EEEEEETTCTTTTHHHHHHHHHHHC----CS
T ss_pred HHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccc-eeEeeecCCCCCCHHHHHHHHHHCC----CC
Confidence 0 00000111100 01112222334455787 9999999999999988888877764 45
Q ss_pred CeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 458 NILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++++++ ++||....+.++.+.. .+.+|+.++
T Consensus 227 ~~~~i~---~~gH~~~~e~P~~~~~--~l~e~~~k~ 257 (258)
T d1xkla_ 227 EAIEIK---GADHMAMLCEPQKLCA--SLLEIAHKY 257 (258)
T ss_dssp EEEEET---TCCSCHHHHSHHHHHH--HHHHHHHHC
T ss_pred EEEEEC---CCCCchHHhCHHHHHH--HHHHHHHhc
Confidence 677787 8899754444544333 477787764
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.65 E-value=5.5e-16 Score=143.48 Aligned_cols=214 Identities=16% Similarity=0.145 Sum_probs=121.3
Q ss_pred CCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 262 SDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
..|+||++||.++.... ..|......| ++||.|+.+|.||.|.+..... .........++..+.+..+++.- .
T Consensus 25 ~~p~ivllHG~~~~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~~~~~i~~~i~~~--~ 98 (281)
T d1c4xa_ 25 QSPAVVLLHGAGPGAHAASNWRPIIPDL-AENFFVVAPDLIGFGQSEYPET---YPGHIMSWVGMRVEQILGLMNHF--G 98 (281)
T ss_dssp TSCEEEEECCCSTTCCHHHHHGGGHHHH-HTTSEEEEECCTTSTTSCCCSS---CCSSHHHHHHHHHHHHHHHHHHH--T
T ss_pred CCCEEEEECCCCCCCcHHHHHHHHHHHH-hCCCEEEEEeCCCCcccccccc---ccccchhhHHHhhhhcccccccc--c
Confidence 45899999997654322 2244444555 4589999999999886533110 00001122333333333333321 2
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-----------hhccCCCCCCCccccccc-CCC----CCH
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----------TTMLDPTIPLTTAEWEEW-GDP----WKE 404 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-----------~~~~~~~~~~~~~~~~~~-g~~----~~~ 404 (505)
.+++.++|||+||.+++.++.++|++++++|...+..... .................+ ..+ ...
T Consensus 99 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (281)
T d1c4xa_ 99 IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGME 178 (281)
T ss_dssp CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHH
T ss_pred cccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhcccccccchhh
Confidence 3689999999999999999999999999999877642110 000000000000000000 011 000
Q ss_pred HH----------------HH----HHH-----hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 405 EF----------------YF----YMK-----SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 405 ~~----------------~~----~~~-----~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
.. .. .+. ...+...+.++++| +|+++|++|..+|++.++++.+.+. ..++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~~~----~~~~ 253 (281)
T d1c4xa_ 179 EIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHD-VLVFHGRQDRIVPLDTSLYLTKHLK----HAEL 253 (281)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSC-EEEEEETTCSSSCTHHHHHHHHHCS----SEEE
T ss_pred hHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccc-eEEEEeCCCCCcCHHHHHHHHHHCC----CCEE
Confidence 00 00 000 01222345677887 9999999999999988888877664 3467
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++++ ++||....+.++.+. ..+.+||.
T Consensus 254 ~~i~---~~gH~~~~e~p~~~~--~~i~~Fl~ 280 (281)
T d1c4xa_ 254 VVLD---RCGHWAQLERWDAMG--PMLMEHFR 280 (281)
T ss_dssp EEES---SCCSCHHHHSHHHHH--HHHHHHHH
T ss_pred EEEC---CCCCchHHhCHHHHH--HHHHHHhC
Confidence 7887 789976433343332 24677874
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.64 E-value=2.1e-15 Score=141.72 Aligned_cols=121 Identities=13% Similarity=0.068 Sum_probs=87.0
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
+.||.+++.. -.. .....|+||++||.++... .|......|+++||.|+.+|.||.|.+... ....
T Consensus 30 ~~~g~~~~y~-~~G-----~~~~~p~llllHG~~~~~~--~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~------~~~~ 95 (310)
T d1b6ga_ 30 GYPGLRAHYL-DEG-----NSDAEDVFLCLHGEPTWSY--LYRKMIPVFAESGARVIAPDFFGFGKSDKP------VDEE 95 (310)
T ss_dssp TCTTCEEEEE-EEE-----CTTCSCEEEECCCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCEE------SCGG
T ss_pred CCCCEEEEEE-Eec-----CCCCCCEEEEECCCCCchH--HHHHHHHHhhccCceEEEeeecCccccccc------cccc
Confidence 4588888643 221 1234689999999876543 355566889999999999999999876431 1111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
...++++.+.+..+++.- +.+++.++|||+||.+++.+|.++|++++++|...+.
T Consensus 96 ~~~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~ 150 (310)
T d1b6ga_ 96 DYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAC 150 (310)
T ss_dssp GCCHHHHHHHHHHHHHHH--TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred cccccccccchhhhhhhc--cccccccccceecccccccchhhhccccceEEEEcCc
Confidence 134566666666555542 2368999999999999999999999999999987653
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.64 E-value=6e-15 Score=135.64 Aligned_cols=210 Identities=15% Similarity=0.139 Sum_probs=119.3
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|.||++||.+++.. .|......|+++||.|+.+|+||.|.+... .....++++.+.+..+++.- ..
T Consensus 22 ~G~~ivllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~dl~~~l~~l--~~ 89 (277)
T d1brta_ 22 TGQPVVLIHGFPLSGH--SWERQSAALLDAGYRVITYDRRGFGQSSQP--------TTGYDYDTFAADLNTVLETL--DL 89 (277)
T ss_dssp SSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------SSCCSHHHHHHHHHHHHHHH--TC
T ss_pred cCCeEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEEeCCCCCccccc--------ccccchhhhhhhhhhhhhcc--Cc
Confidence 4577999999876533 366666788899999999999998875321 11123444444343333321 23
Q ss_pred CcEEEEeeChHHH-HHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccc--------------------ccc---
Q 010654 342 EKLCIEGRSAGGL-LIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE--------------------WEE--- 397 (505)
Q Consensus 342 ~rv~i~G~S~GG~-~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~--------------------~~~--- 397 (505)
+++.++|||+||. ++..++..+|++++++|...++.................. +..
T Consensus 90 ~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (277)
T d1brta_ 90 QDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYN 169 (277)
T ss_dssp CSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTT
T ss_pred ccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhccccccc
Confidence 6899999999964 5555677789999999987664321111000000000000 000
Q ss_pred ----cCCCCCHHH----HHHH---------H-----hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCC
Q 010654 398 ----WGDPWKEEF----YFYM---------K-----SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT 455 (505)
Q Consensus 398 ----~g~~~~~~~----~~~~---------~-----~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~ 455 (505)
......... +... . ..+....+.++++| +|+++|++|..++++...++... ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~g~~D~~~~~~~~~~~~~~---~~~ 245 (277)
T d1brta_ 170 LDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVP-ALILHGTGDRTLPIENTARVFHK---ALP 245 (277)
T ss_dssp HHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSC-EEEEEETTCSSSCGGGTHHHHHH---HCT
T ss_pred cchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCcc-ceeEeecCCCCcCHHHHHHHHHH---hCC
Confidence 000000000 0000 0 00111334566887 99999999999998776554433 233
Q ss_pred CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 456 DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
..+++.++ ++||....+.++.+. ..+.+||.+
T Consensus 246 ~~~~~~i~---~~gH~~~~e~p~~~~--~~i~~fL~k 277 (277)
T d1brta_ 246 SAEYVEVE---GAPHGLLWTHAEEVN--TALLAFLAK 277 (277)
T ss_dssp TSEEEEET---TCCTTHHHHTHHHHH--HHHHHHHHC
T ss_pred CCEEEEEC---CCCCchHHhCHHHHH--HHHHHHHCc
Confidence 46778887 889976433343332 357888864
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.63 E-value=8.7e-16 Score=142.58 Aligned_cols=221 Identities=14% Similarity=0.104 Sum_probs=131.0
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.||.+|+....-+ +..|+||++||.+++.. .|......| +.||.|+.+|.||.|..... ...
T Consensus 14 ~~g~~i~y~~~G~-------~~~p~lvllHG~~~~~~--~~~~~~~~L-~~~~~vi~~d~~G~G~S~~~--------~~~ 75 (291)
T d1bn7a_ 14 VLGERMHYVDVGP-------RDGTPVLFLHGNPTSSY--LWRNIIPHV-APSHRCIAPDLIGMGKSDKP--------DLD 75 (291)
T ss_dssp ETTEEEEEEEESC-------SSSSCEEEECCTTCCGG--GGTTTHHHH-TTTSCEEEECCTTSTTSCCC--------SCC
T ss_pred ECCEEEEEEEeCC-------CCCCeEEEECCCCCCHH--HHHHHHHHH-hcCCEEEEEeCCCCcccccc--------ccc
Confidence 4888887653211 22467999999876543 355555666 45999999999999875421 122
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------------ccCC-
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------MLDP- 386 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------------~~~~- 386 (505)
...+++.+.+..+++.- +.+++.++|||+||.+++.++.++|+++++++...+....... +...
T Consensus 76 ~~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (291)
T d1bn7a_ 76 YFFDDHVRYLDAFIEAL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTAD 153 (291)
T ss_dssp CCHHHHHHHHHHHHHHT--TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTT
T ss_pred cchhHHHHHHhhhhhhh--ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhh
Confidence 34555555555555542 3368999999999999999999999999998875432210000 0000
Q ss_pred --------CC-------------CCCccc---c-cccCCCCC-HHHHHHHHhCC--------------hhhcccCCCCCe
Q 010654 387 --------TI-------------PLTTAE---W-EEWGDPWK-EEFYFYMKSYS--------------PVDNVKAQNYPH 426 (505)
Q Consensus 387 --------~~-------------~~~~~~---~-~~~g~~~~-~~~~~~~~~~s--------------p~~~~~~~~~Pp 426 (505)
.. +..... + ..+..+.. ...+....... ......++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P- 232 (291)
T d1bn7a_ 154 VGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVP- 232 (291)
T ss_dssp HHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSC-
T ss_pred hHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCC-
Confidence 00 000000 0 00000000 00111111111 11223566887
Q ss_pred EEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 427 ILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 427 ~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+|+++|++|..+|+..+.++.+.+.. .+++.++ ++||....+.++.+.. .+.+||+
T Consensus 233 ~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~---~~gH~~~~e~p~~v~~--~i~~fL~ 288 (291)
T d1bn7a_ 233 KLLFWGTPGVLIPPAEAARLAESLPN----CKTVDIG---PGLHYLQEDNPDLIGS--EIARWLP 288 (291)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEE---EESSCGGGTCHHHHHH--HHHHHSG
T ss_pred EEEEEeCCCCCcCHHHHHHHHHHCCC----CEEEEEC---CCCCchHHhCHHHHHH--HHHHHHH
Confidence 99999999999999888888777643 4677887 6799776555554332 4667765
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.62 E-value=4.4e-15 Score=137.58 Aligned_cols=250 Identities=16% Similarity=0.152 Sum_probs=145.6
Q ss_pred ceEEEEEEECC-CCceeeEEEEEeCCcc----CCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCC
Q 010654 231 YFTERKWASAS-DGTQIPICIVYRKNLV----KLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGG 304 (505)
Q Consensus 231 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~----~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~ 304 (505)
-..+++++.|. -|..+...+++|+++. .+++++|+|+++||..+....+... .......+.|.+|++++.....
T Consensus 12 G~~~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~ 91 (299)
T d1pv1a_ 12 GRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRG 91 (299)
T ss_dssp EEEEEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCS
T ss_pred cEEEEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccc
Confidence 35667777765 5788999999999762 1345799999999976542211000 1123455679999998742210
Q ss_pred -------------CCchhHHHccc-c-cCCcchHHHHH--HHHHHHHHcC-------CCCCCcEEEEeeChHHHHHHHHH
Q 010654 305 -------------ELGRQWYENGK-F-LKKKNTFTDFI--ACAEYLIKNC-------YCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 305 -------------~~g~~~~~~~~-~-~~~~~~~~D~~--~~~~~l~~~~-------~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
+.+..|..... . ..+...++|.. +.+.++.+.- ..++++.+|+|+||||+.|+.++
T Consensus 92 ~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~a 171 (299)
T d1pv1a_ 92 DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGY 171 (299)
T ss_dssp TTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHH
T ss_pred cccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHH
Confidence 00111110000 0 00111223322 2333443331 23446899999999999999988
Q ss_pred hh--CCCceeEEEecCCchhhhhhccCCCCCCCccccc-ccCCCCCHHHHHHHHhCChhhcc---cCCCCCeEEEEccCC
Q 010654 361 NM--RPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYFYMKSYSPVDNV---KAQNYPHILVTAGLN 434 (505)
Q Consensus 361 ~~--~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~~---~~~~~Pp~Li~~G~~ 434 (505)
.+ +|++|.++++.+|+.++..... ....+. .+|... + .+...+|...+ .+...|++++.+|++
T Consensus 172 l~~~~p~~f~~~~s~s~~~~~~~~~~------~~~~~~~~~g~~~--~---~~~~~~~~~l~~~~~~~~~~~i~~~~G~~ 240 (299)
T d1pv1a_ 172 LKGYSGKRYKSCSAFAPIVNPSNVPW------GQKAFKGYLGEEK--A---QWEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp HHTGGGTCCSEEEEESCCCCSTTSHH------HHHHHHHHSCC---------CGGGCHHHHGGGSCCCTTCCEEEECCTT
T ss_pred HHhcCCCceEEEeeccCcCCcccccc------hhhhhhhhcccch--h---hhhhcCHHHHHHHhhccCCcceeEecCCC
Confidence 65 5899999999999876432110 000111 122211 1 11334554433 334556799999999
Q ss_pred CCCCCCC-hHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 435 DPRVMYS-EPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 435 D~~vp~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|...+.. ..+.|.+++++++.+..+ .|...+|.+|... ..+ ..+...+.|+.++||+
T Consensus 241 D~~~~~~~~~~~f~~~~~~~g~~~~~-~~~~~~G~~Hsw~--yW~--~~i~~~l~f~a~~lgl 298 (299)
T d1pv1a_ 241 DPFLEEHLKPELLLEAVKATSWQDYV-EIKKVHGFDHSYY--FVS--TFVPEHAEFHARNLGL 298 (299)
T ss_dssp CTTTTTTCCTHHHHHHHTTSTTTTSE-EEECCTTCCSSHH--HHH--HHHHHHHHHHHHHTTC
T ss_pred CcchhhhhcHHHHHHHHHhcCCCcce-EEEecCCCCcCHH--HHH--HHHHHHHHHHHHhcCC
Confidence 9987654 468899999999988663 3443336679521 111 2344578999999985
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.62 E-value=6.2e-16 Score=142.28 Aligned_cols=219 Identities=14% Similarity=0.115 Sum_probs=131.9
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCCc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
++|.++++|+ .|..|+..+. + + ..|+|+++||..+......|.. ..+...+++++|++||-- .+.+.
T Consensus 3 ~~e~~~v~s~~~~r~~~~~v~-~-~------~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~-~~~~y 73 (267)
T d1r88a_ 3 PYENLMVPSPSMGRDIPVAFL-A-G------GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGG-AYSMY 73 (267)
T ss_dssp CCEEEEEEETTTTEEEEEEEE-C-C------SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCC-TTSTT
T ss_pred ceEEEEEecccCCceeeEEEE-C-C------CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCC-CCcCC
Confidence 3567777765 5677887643 2 2 2499999999654322222321 235667789999999842 22233
Q ss_pred hhHHHcccccCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC
Q 010654 308 RQWYENGKFLKKKNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 385 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 385 (505)
.+|. ..+...++++. +.+.++.++..+|++|++|+|+||||++++.++.++|++|+++++.+|..++......
T Consensus 74 ~~~~-----~~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~~~~~ 148 (267)
T d1r88a_ 74 TNWE-----QDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTN 148 (267)
T ss_dssp SBCS-----SCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHH
T ss_pred cccc-----ccccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCCccch
Confidence 3332 11222334333 3667777777789999999999999999999999999999999999998764321100
Q ss_pred CCCCC------CcccccccCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCCCCCC-----------ChHHHH
Q 010654 386 PTIPL------TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDPRVMY-----------SEPAKF 446 (505)
Q Consensus 386 ~~~~~------~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~~vp~-----------~~~~~~ 446 (505)
..... .......+|.+..+. +.+.+|..+++++ ..+++++.+|.+|..+.+ .++.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~~~~~~ 224 (267)
T d1r88a_ 149 GAIAAGMQQFGGVDTNGMWGAPQLGR----WKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMF 224 (267)
T ss_dssp HHHHHHHHHHHCCCTHHHHCCGGGST----TGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHH
T ss_pred hhhhhHHhhhcCCcHhhccCCcchHh----HHhcCHHHHHHhccccCceEEEEecCCCcccccchhhhhHHHhhhhHHHH
Confidence 00000 000001123221111 1345776665544 233599999999876653 245578
Q ss_pred HHHHHhcCC-CCCeEEEEecCCCCCC
Q 010654 447 VAKLREMKT-DDNILLFKCELGAGHF 471 (505)
Q Consensus 447 ~~~L~~~~~-~~~~~~~~~~~~~gH~ 471 (505)
.++|++.+. ++.+... ++++|.
T Consensus 225 ~~~l~~~~g~~~~~~~~---~~G~H~ 247 (267)
T d1r88a_ 225 YNQYRSVGGHNGHFDFP---ASGDNG 247 (267)
T ss_dssp HHHHHHTTCCSEEEECC---SSCCSS
T ss_pred HHHHHHcCCCcEEEEEc---CCCeEC
Confidence 888887764 4433322 267894
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.61 E-value=1e-14 Score=137.33 Aligned_cols=125 Identities=16% Similarity=0.033 Sum_probs=87.0
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
+.-.+.+.||.+|+...+-. .+.|.||++||++++...+ .. ...+.+.||.|+++|.||.|.+...
T Consensus 12 ~~~~i~~~dg~~i~y~~~G~-------~~g~pvvllHG~~g~~~~~--~~-~~~~l~~~~~Vi~~D~rG~G~S~~~---- 77 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQCGN-------PHGKPVVMLHGGPGGGCND--KM-RRFHDPAKYRIVLFDQRGSGRSTPH---- 77 (313)
T ss_dssp EEEEEECSSSCEEEEEEEEC-------TTSEEEEEECSTTTTCCCG--GG-GGGSCTTTEEEEEECCTTSTTSBST----
T ss_pred CCCEEEeCCCcEEEEEEecC-------CCCCEEEEECCCCCCccch--HH-HhHHhhcCCEEEEEeccccCCCCcc----
Confidence 55566778999886553311 2346788899998765432 22 2334567999999999998876431
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.......+.++.+.+..++++- ..+++.|+|||+||.+++.++.++|++++..+..++.
T Consensus 78 --~~~~~~~~~~~~~dl~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~ 136 (313)
T d1azwa_ 78 --ADLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp --TCCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --ccccchhHHHHHHHHHHHHHhh--ccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccc
Confidence 1222234566666666655552 2367899999999999999999999999999887664
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.61 E-value=5.2e-16 Score=143.38 Aligned_cols=146 Identities=10% Similarity=-0.035 Sum_probs=99.7
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CCchhH----HHHHH----CCcEEEEEccc
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSSR----LSLLD----RGFIFAIAQIR 301 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~~~~~----~~l~~----~G~~v~~~d~r 301 (505)
-..+.+++++.+|. .++.+++|+++ ++++++|+|+++||+++..... .+.... ..+.+ .+++|+.++.+
T Consensus 25 g~v~~~~~~~~~~~-r~~~vylP~~y-~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 102 (273)
T d1wb4a1 25 GRIVKETYTGINGT-KSLNVYLPYGY-DPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFN 102 (273)
T ss_dssp CEEEEEEEEETTEE-EEEEEEECTTC-CTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSC
T ss_pred CeEEEEEEecCCCe-EEEEEEeCCCC-CCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccC
Confidence 47788899998885 57999999998 7888999999999987654322 111111 12222 26899999998
Q ss_pred CCCCCchhHHHcccccCCc-chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh
Q 010654 302 GGGELGRQWYENGKFLKKK-NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378 (505)
Q Consensus 302 G~~~~g~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 378 (505)
+....+..+.......... .+..++...+..+..+..+|++|++|+|+|+||++++.++.++|++|+++++.+|...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~ 180 (273)
T d1wb4a1 103 GGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 180 (273)
T ss_dssp STTCCTTTHHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred CCCCccccchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccc
Confidence 8777666554321111100 0111111122222333457999999999999999999999999999999999999654
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.59 E-value=2e-15 Score=136.75 Aligned_cols=207 Identities=14% Similarity=0.056 Sum_probs=121.3
Q ss_pred EEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEE
Q 010654 266 LLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 345 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~ 345 (505)
.|++||.+++. ..|......|+++||.|+.+|.||.|...... .....+++..+.+..++.+-. ..+++.
T Consensus 5 ~vliHG~~~~~--~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~-------~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 74 (256)
T d3c70a1 5 FVLIHTICHGA--WIWHKLKPLLEALGHKVTALDLAASGVDPRQI-------EEIGSFDEYSEPLLTFLEALP-PGEKVI 74 (256)
T ss_dssp EEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHTHHHHHHHHHSC-TTCCEE
T ss_pred EEEeCCCCCCH--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------CCCCCHHHHHHHhhhhhhhhc-ccccee
Confidence 47899986653 34666778899999999999999998764321 112345555555544433321 246899
Q ss_pred EEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc----------cCCCCCCCc-cccc-----------------c
Q 010654 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----------LDPTIPLTT-AEWE-----------------E 397 (505)
Q Consensus 346 i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~----------~~~~~~~~~-~~~~-----------------~ 397 (505)
++|||+||.+++.++.++|++++++|...+........ ......... .... .
T Consensus 75 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T d3c70a1 75 LVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRE 154 (256)
T ss_dssp EEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHH
T ss_pred ecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhh
Confidence 99999999999999999999999998876543111000 000000000 0000 0
Q ss_pred --cCCCCCHHH-HHHHH------------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 398 --WGDPWKEEF-YFYMK------------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 398 --~g~~~~~~~-~~~~~------------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
+......+. ..... ..........+++| +++++|++|..+|++...++.+.+ ...+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~----p~~~~~~i 229 (256)
T d3c70a1 155 NLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIK-KIYVWTDQDEIFLPEFQLWQIENY----KPDKVYKV 229 (256)
T ss_dssp HTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSC-EEEEECTTCSSSCHHHHHHHHHHS----CCSEEEEC
T ss_pred hhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccc-eeEEeecCCCCCCHHHHHHHHHHC----CCCEEEEE
Confidence 000000110 00111 11111223334677 999999999999987776665544 34567777
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 463 KCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+ ++||....+.++.+.. .+.+|+++
T Consensus 230 ~---~agH~~~~e~P~~~~~--~l~~~~~~ 254 (256)
T d3c70a1 230 E---GGDHKLQLTKTKEIAE--ILQEVADT 254 (256)
T ss_dssp C---SCCSCHHHHSHHHHHH--HHHHHHHH
T ss_pred C---CCCCchHHhCHHHHHH--HHHHHHHh
Confidence 7 8899764444544333 35566654
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.58 E-value=1.5e-14 Score=133.05 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=71.1
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|.||++||.+.+.. .|......|+++||.|+++|.||.|.+... .....++++.+.+..+++. .+.
T Consensus 22 ~g~~illlHG~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~di~~~i~~--l~~ 89 (279)
T d1hkha_ 22 SGQPVVLIHGYPLDGH--SWERQTRELLAQGYRVITYDRRGFGGSSKV--------NTGYDYDTFAADLHTVLET--LDL 89 (279)
T ss_dssp SSEEEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECCTTSTTSCCC--------SSCCSHHHHHHHHHHHHHH--HTC
T ss_pred cCCeEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEEechhhCCcccc--------ccccchhhhhhhhhhhhhh--cCc
Confidence 3477899999876533 366666778899999999999999876321 1123344444444444433 134
Q ss_pred CcEEEEeeChHH-HHHHHHHhhCCCceeEEEecCCc
Q 010654 342 EKLCIEGRSAGG-LLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 342 ~rv~i~G~S~GG-~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+++.++|||+|| .++..++..+|++++.++..++.
T Consensus 90 ~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~ 125 (279)
T d1hkha_ 90 RDVVLVGFSMGTGELARYVARYGHERVAKLAFLASL 125 (279)
T ss_dssp CSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CccccccccccccchhhhhccccccccceeEEeecc
Confidence 689999999996 55556677789999998887654
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.57 E-value=1.5e-14 Score=134.08 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=80.2
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 321 (505)
+|.+|++.. . +..|+||++||.+++.. .|......| .++|.|+++|+||.|....... ......
T Consensus 16 ~~~~l~y~~---~------G~gp~vv~lHG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~s~~~~~----~~~~~~ 79 (293)
T d1ehya_ 16 PDVKIHYVR---E------GAGPTLLLLHGWPGFWW--EWSKVIGPL-AEHYDVIVPDLRGFGDSEKPDL----NDLSKY 79 (293)
T ss_dssp SSCEEEEEE---E------ECSSEEEEECCSSCCGG--GGHHHHHHH-HTTSEEEEECCTTSTTSCCCCT----TCGGGG
T ss_pred CCEEEEEEE---E------CCCCeEEEECCCCCCHH--HHHHHHHHH-hcCCEEEEecCCcccCCccccc----cccccc
Confidence 567786531 1 23578999999876432 355555666 4589999999999886532110 111223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.++++...+..+++.- ..+++.|+|||+||.+++.++.++|+++.+++..+|.
T Consensus 80 ~~~~~a~~~~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 132 (293)
T d1ehya_ 80 SLDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 132 (293)
T ss_dssp CHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred cchhhhhHHHhhhhhc--CccccccccccccccchhcccccCccccceeeeeecc
Confidence 4455555555554432 2368999999999999999999999999999988774
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.56 E-value=2.6e-15 Score=136.85 Aligned_cols=202 Identities=14% Similarity=0.094 Sum_probs=119.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+.... .|......|+ .||.|+++|.||+|.+.. .....+.|+.+.+ .... .+
T Consensus 11 ~~~lvllHG~~~~~~--~~~~~~~~L~-~~~~vi~~D~~G~G~S~~---------~~~~~~~d~~~~~---~~~~---~~ 72 (256)
T d1m33a_ 11 NVHLVLLHGWGLNAE--VWRCIDEELS-SHFTLHLVDLPGFGRSRG---------FGALSLADMAEAV---LQQA---PD 72 (256)
T ss_dssp SSEEEEECCTTCCGG--GGGGTHHHHH-TTSEEEEECCTTSTTCCS---------CCCCCHHHHHHHH---HTTS---CS
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHh-CCCEEEEEeCCCCCCccc---------ccccccccccccc---cccc---cc
Confidence 367888999865432 3555566664 689999999999886522 1223455544333 3322 36
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch--hhhhhc---------------------------cCCCCCC-Cc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV--DVLTTM---------------------------LDPTIPL-TT 392 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~--d~~~~~---------------------------~~~~~~~-~~ 392 (505)
++.++|||+||.+++.++.++|+.++.++...+.. ...... ....... ..
T Consensus 73 ~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
T d1m33a_ 73 KAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETA 152 (256)
T ss_dssp SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTH
T ss_pred ceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccch
Confidence 78899999999999999999999999887765421 100000 0000000 00
Q ss_pred ccc-c---c--cCCC-CCHH----HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 393 AEW-E---E--WGDP-WKEE----FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 393 ~~~-~---~--~g~~-~~~~----~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
... . . ...+ .... ....+...+....++++++| +|+++|++|..+|++.+.++.+.+ ...++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~p~~~~~~l~~~~----~~~~~~~ 227 (256)
T d1m33a_ 153 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMP-FLRLYGYLDGLVPRKVVPMLDKLW----PHSESYI 227 (256)
T ss_dssp HHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSC-EEEEEETTCSSSCGGGCC-CTTTC----TTCEEEE
T ss_pred hhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCC-ccccccccCCCCCHHHHHHHHHHC----CCCEEEE
Confidence 000 0 0 0011 0111 11222333444566778898 999999999999998877665443 3457788
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 462 FKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++ ++||....+.++.+.. .+.+|+++
T Consensus 228 i~---~~gH~~~~e~p~~~~~--~l~~fl~~ 253 (256)
T d1m33a_ 228 FA---KAAHAPFISHPAEFCH--LLVALKQR 253 (256)
T ss_dssp ET---TCCSCHHHHSHHHHHH--HHHHHHTT
T ss_pred EC---CCCCchHHHCHHHHHH--HHHHHHHH
Confidence 87 8899754334443332 46777754
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.56 E-value=7.2e-14 Score=130.03 Aligned_cols=125 Identities=18% Similarity=0.116 Sum_probs=84.5
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
+.-.+.+.||.+|+....-++ ..|.||++||++++... |.... .++++||.|+++|.||.|.+...
T Consensus 12 ~~~~v~~~dG~~i~y~~~G~~-------~g~pvvllHG~~~~~~~--w~~~~-~~l~~~~~vi~~D~rG~G~S~~~---- 77 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSGNP-------NGKPAVFIHGGPGGGIS--PHHRQ-LFDPERYKVLLFDQRGCGRSRPH---- 77 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECT-------TSEEEEEECCTTTCCCC--GGGGG-GSCTTTEEEEEECCTTSTTCBST----
T ss_pred cCCEEEeCCCcEEEEEEecCC-------CCCeEEEECCCCCcccc--hHHHH-HHhhcCCEEEEEeCCCccccccc----
Confidence 344567789999976533221 24678889998876544 44333 34467999999999999876432
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.........++.+.+..+..+- ...++.++|+|+||.++..++..+|++++..+...+.
T Consensus 78 --~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~ 136 (313)
T d1wm1a_ 78 --ASLDNNTTWHLVADIERLREMA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 136 (313)
T ss_dssp --TCCTTCSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --ccccccchhhHHHHHHhhhhcc--CCCcceeEeeecCCchhhHHHHHHhhhheeeeecccc
Confidence 1112233444444444444432 3368999999999999999999999999988877553
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.50 E-value=5.2e-16 Score=146.25 Aligned_cols=230 Identities=12% Similarity=0.014 Sum_probs=122.4
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-----CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-----FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-----~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
+.+..+.|.+. ++.| ||++||++.+...+. +....+.++++||.|+.+|+||+|.++.............
T Consensus 46 ~~v~~~~p~~~----~~~P-vvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~ 120 (318)
T d1qlwa_ 46 MYVRYQIPQRA----KRYP-ITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK 120 (318)
T ss_dssp EEEEEEEETTC----CSSC-EEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTS
T ss_pred EEEEEECCCCC----CCCc-EEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHH
Confidence 33444556432 4567 566899987654322 3345689999999999999999998876433211111111
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCce-eEEEecCCchhhhh-------------hccCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLF-KAAVAAVPFVDVLT-------------TMLDP 386 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~-~a~v~~~~~~d~~~-------------~~~~~ 386 (505)
.. ..++..-.....++++.|+|+||.++..++....... ...+...++..... .....
T Consensus 121 ~~--------~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (318)
T d1qlwa_ 121 AP--------ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK 192 (318)
T ss_dssp SC--------GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH
T ss_pred HH--------HHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhh
Confidence 11 1111111122346667899999887666655432211 11111111000000 00000
Q ss_pred CCCCCcccccccCCCCCHHHHHHH---------------HhCChhhcccCCCCCeEEEEccCCCCCCCCC-----hHHHH
Q 010654 387 TIPLTTAEWEEWGDPWKEEFYFYM---------------KSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-----EPAKF 446 (505)
Q Consensus 387 ~~~~~~~~~~~~g~~~~~~~~~~~---------------~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~-----~~~~~ 446 (505)
..+. ................. ...++......+++| +|++||++|.++|.. ++..+
T Consensus 193 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~Lii~G~~D~~~p~~~~~~~~~~~~ 268 (318)
T d1qlwa_ 193 LDGT---VLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIP-VLVVFGDHIEEFPRWAPRLKACHAF 268 (318)
T ss_dssp HTSE---EEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSC-EEEEECSSCTTCTTTHHHHHHHHHH
T ss_pred hccc---cchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCC-EEEEecCcCcccChhhhHHHHHHHH
Confidence 0000 00000000000000000 012455566677887 999999999999964 45578
Q ss_pred HHHHHhcCCCCCeEEEEecC--CCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 447 VAKLREMKTDDNILLFKCEL--GAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 447 ~~~L~~~~~~~~~~~~~~~~--~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+++|+++|.+++++.+|++. |.||....+.. ..+....+.+||+++
T Consensus 269 ~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~-~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 269 IDALNAAGGKGQLMSLPALGVHGNSHMMMQDRN-NLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTT-HHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEecccccCCCcCccccCcC-HHHHHHHHHHHHHhc
Confidence 89999999999999888531 56797533222 112234689999986
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.49 E-value=1.6e-13 Score=124.09 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=69.5
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
+.+.|+||++||.+++. ..|......|++.||.|+.+|+||+|....... . ...+...+...+......
T Consensus 13 ~~~~P~ivllHG~~~~~--~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~------~---~~~~~~~~~~~~~~~~~~ 81 (264)
T d1r3da_ 13 TARTPLVVLVHGLLGSG--ADWQPVLSHLARTQCAALTLDLPGHGTNPERHC------D---NFAEAVEMIEQTVQAHVT 81 (264)
T ss_dssp BTTBCEEEEECCTTCCG--GGGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCCH--HHHHHHHHHHHhCCCEEEEEecccccccccccc------c---ccchhhhhhhhccccccc
Confidence 34568999999987653 346677778888999999999999986543211 0 111112222222223333
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
..+++.++|||+||.+++.++.++|+....++..
T Consensus 82 ~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~ 115 (264)
T d1r3da_ 82 SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGA 115 (264)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEE
T ss_pred ccCceeeeeecchHHHHHHHHHhCchhccccccc
Confidence 4578999999999999999999999877666543
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.40 E-value=1.4e-12 Score=120.22 Aligned_cols=117 Identities=7% Similarity=-0.022 Sum_probs=77.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.||.+|++.. . ++.|.||++||.+++.. .|......|+ .+|.|+++|.||.|.+...- ......
T Consensus 15 ~~g~~i~y~~---~------G~g~~vvllHG~~~~~~--~~~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~----~~~~~~ 78 (298)
T d1mj5a_ 15 IKGRRMAYID---E------GTGDPILFQHGNPTSSY--LWRNIMPHCA-GLGRLIACDLIGMGDSDKLD----PSGPER 78 (298)
T ss_dssp ETTEEEEEEE---E------SCSSEEEEECCTTCCGG--GGTTTGGGGT-TSSEEEEECCTTSTTSCCCS----SCSTTS
T ss_pred ECCEEEEEEE---E------cCCCcEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEEeCCCCCCCCCCc----cccccc
Confidence 4888887541 1 23478999999876543 3444445554 56999999999988654321 011112
Q ss_pred chHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 321 NTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 321 ~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
....+..+.+.. +.+.. ..+++.++|||+||.+++.++.++|+++++++...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~ 132 (298)
T d1mj5a_ 79 YAYAEHRDYLDALWEALD--LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEA 132 (298)
T ss_dssp SCHHHHHHHHHHHHHHTT--CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEE
T ss_pred cccchhhhhhcccccccc--ccccCeEEEecccchhHHHHHHHHHhhhheeecccc
Confidence 233444444433 33333 246899999999999999999999999998887644
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.40 E-value=1.5e-13 Score=127.48 Aligned_cols=127 Identities=16% Similarity=0.127 Sum_probs=80.9
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec-CCchhhhhhccCCCCCCCccccccc-CCC--CCHHHHHHHHhC
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDVLTTMLDPTIPLTTAEWEEW-GDP--WKEEFYFYMKSY 413 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~~~~~~~~~~~~~~~-g~~--~~~~~~~~~~~~ 413 (505)
.+||+||+|+|+|+||+|++.++..+|++|+++++. ++.. +.... ...... ..+ +.+ ..+.........
T Consensus 7 ~iDp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p-~~ca~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 79 (318)
T d2d81a1 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP-YDCAR---NQYYTS---CMYNGYPSITTPTANMKSWSG 79 (318)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCC-TTTTS---SSCGGG---GSTTCCCCCHHHHHHHHHHBT
T ss_pred CCCccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCc-hhhhc---ccchHH---HhhcCCCCCcChhHHHHHHhh
Confidence 489999999999999999999999999999754432 2211 11100 000000 001 111 122222233334
Q ss_pred ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 414 SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 414 sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
+.+....++..||+||+||++|.+||+.++.+++++|++.+.+.++..... +++||++
T Consensus 80 ~~i~~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~-~gagH~f 137 (318)
T d2d81a1 80 NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTT-TGAVHTF 137 (318)
T ss_dssp TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEE-TTCCSSE
T ss_pred cCCcchhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEe-CCCCCCC
Confidence 444444444445799999999999999999999999998876554433332 3889975
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=8.1e-10 Score=100.40 Aligned_cols=187 Identities=11% Similarity=0.079 Sum_probs=116.7
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
+++||+.|.-. ...+.|+..+. ...+|+|||||++|+|.........+|.++..++. .++++....... ..|||
T Consensus 18 ~~~l~i~d~dG--~~~~~l~~~~~--~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sp 92 (269)
T d2hqsa1 18 PYELRVSDYDG--YNQFVVHRSPQ--PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAFSP 92 (269)
T ss_dssp CEEEEEEETTS--CSCEEEEEESS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEEEECCSSCEEEEEECT
T ss_pred eEEEEEEcCCC--CCcEEEecCCC--ceeeeEECCCCCEEEEEEeeccCcceeeeecccCc-eeEEeeeecccccceecC
Confidence 56899999732 35667776643 45689999999999999888778899999999986 777765543333 45999
Q ss_pred eCCEEEEEEcCCCCC------------------------------------------CceEEEeeCCCCCCceEEEcCCC
Q 010654 86 RGNHFFITRRSDELF------------------------------------------NSELLACPVDNTSETTVLIPHRE 123 (505)
Q Consensus 86 dg~~l~~~~~~~~~~------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~ 123 (505)
||+++++.....+.. ...++..++++ +... .++..
T Consensus 93 dg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~-~~~~-~~~~~- 169 (269)
T d2hqsa1 93 DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GAPQ-RITWE- 169 (269)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCCE-ECCCS-
T ss_pred CCCeeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeeccc-ccce-eeecc-
Confidence 999999887542110 01222222222 1111 11111
Q ss_pred CceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCC
Q 010654 124 SVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTP 201 (505)
Q Consensus 124 ~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 201 (505)
........|+++ .+++....++...+++++... ...+.+. ... ....+.++|||+.|+|.... ...
T Consensus 170 ~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~--------~~~-~~~~p~~SPDG~~i~f~s~~-~~~ 237 (269)
T d2hqsa1 170 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQVLS--------STF-LDETPSLAPNGTMVIYSSSQ-GMG 237 (269)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT--CCEEECC--------CSS-SCEEEEECTTSSEEEEEEEE-TTE
T ss_pred cccccccccccccceeEEEeecCCceeeeEeeccc--ccceEee--------cCc-cccceEECCCCCEEEEEEcC-CCC
Confidence 122345677765 567777777777777777553 2111111 111 11124578999999987543 455
Q ss_pred ceEEEEECCCCc
Q 010654 202 PSVYDYDMDMGI 213 (505)
Q Consensus 202 ~~~~~~~~~~~~ 213 (505)
.+||++++.++.
T Consensus 238 ~~l~~~~~dg~~ 249 (269)
T d2hqsa1 238 SVLNLVSTDGRF 249 (269)
T ss_dssp EEEEEEETTSCC
T ss_pred cEEEEEECCCCC
Confidence 689999987765
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=6.1e-11 Score=107.18 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=70.5
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.||++||.+++.. .|......|.+. ||.|+.+|.||+|.....- ...++++.+.+..+.+.. . +
T Consensus 4 PvvllHG~~~~~~--~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~---------~~~~~~~~~~l~~~l~~l--~-~ 69 (268)
T d1pjaa_ 4 PVIVVHGLFDSSY--SFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---------WEQVQGFREAVVPIMAKA--P-Q 69 (268)
T ss_dssp CEEEECCTTCCGG--GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---------HHHHHHHHHHHHHHHHHC--T-T
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcc---------ccCHHHHHHHHHHHHhcc--C-C
Confidence 3567899876543 466666788775 8999999999987653211 134555555555555442 2 7
Q ss_pred cEEEEeeChHHHHHHHHHhhCCC-ceeEEEecCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVP 375 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~ 375 (505)
++.++|||+||.+++.++.++|+ +++.++..++
T Consensus 70 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~ 103 (268)
T d1pjaa_ 70 GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSS 103 (268)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESC
T ss_pred eEEEEccccHHHHHHHHHHHCCccccceEEEECC
Confidence 89999999999999999999998 5888877655
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.18 E-value=1.5e-09 Score=99.03 Aligned_cols=184 Identities=14% Similarity=0.095 Sum_probs=116.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc---cceEEEEEeCCCCCceeeeeccccc------
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRVVG------ 78 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~---~~~~l~~~d~~~~~~~~~l~~~~~~------ 78 (505)
..||++++.++ +.+.|... +.....+.|||||++|+|..... ...+||++++.+++ .++|+.....
T Consensus 21 ~dl~~~d~~~g--~~~~Lt~~--~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~-~~~lt~~~~~~~~~~~ 95 (281)
T d1k32a2 21 DDLWEHDLKSG--STRKIVSN--LGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRM 95 (281)
T ss_dssp TEEEEEETTTC--CEEEEECS--SSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEE
T ss_pred CcEEEEECCCC--CEEEEecC--CCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc-eEEeeecCCCccCccc
Confidence 36999999775 45666543 44567899999999999987543 24689999999997 7877643311
Q ss_pred --eeEEeeeeCCEEEEEEcCCCC-CCceEEEeeCCCC-------CC--ce-----------------------------E
Q 010654 79 --VDTAASHRGNHFFITRRSDEL-FNSELLACPVDNT-------SE--TT-----------------------------V 117 (505)
Q Consensus 79 --~~~~~s~dg~~l~~~~~~~~~-~~~~l~~~~~~~~-------~~--~~-----------------------------~ 117 (505)
....|+|||+.|+|....... ....++.++.++. +. .. +
T Consensus 96 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (281)
T d1k32a2 96 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKI 175 (281)
T ss_dssp CSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEE
T ss_pred cccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeeccccceeeeeccCCccee
Confidence 123499999999998664321 2223444443220 00 00 0
Q ss_pred ----------EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCccc
Q 010654 118 ----------LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFS 187 (505)
Q Consensus 118 ----------~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 187 (505)
..+... .....+.+.++.+++....++..+|++++++ +...++|+.... ... ..+++|
T Consensus 176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~~lt~~~~-------~~~--~~~SpD 243 (281)
T d1k32a2 176 WIEVNSGAFKKIVDMS-THVSSPVIVGHRIYFITDIDGFGQIYSTDLD--GKDLRKHTSFTD-------YYP--RHLNTD 243 (281)
T ss_dssp EEEEETTEEEEEECCS-SCCEEEEEETTEEEEEECTTSSCEEEEEETT--SCSCEECCCCCS-------SCE--EEEEES
T ss_pred eeeccccceeeccCCc-cccceeeeeccccceecccccccceEEEeCC--CCceEEeecCCC-------ccc--ccCcCC
Confidence 000000 1122456778888888888888899999886 444544442211 111 246789
Q ss_pred CCEEEEEEecCCCCceEEEEECCCCc
Q 010654 188 SRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 188 ~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
|+.|+|... .+||++++++++
T Consensus 244 G~~I~f~~~-----~~l~~~d~~~g~ 264 (281)
T d1k32a2 244 GRRILFSKG-----GSIYIFNPDTEK 264 (281)
T ss_dssp SSCEEEEET-----TEEEEECTTTCC
T ss_pred CCEEEEEeC-----CEEEEEECCCCC
Confidence 999998654 479999999887
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.16 E-value=3.4e-10 Score=106.12 Aligned_cols=206 Identities=16% Similarity=0.132 Sum_probs=124.5
Q ss_pred CCCcEEEEEcCCCCcCCC------CCC-chhH---HHHHHCCcEEEEEcccCCCCCchhHHHcc------c-ccCCcchH
Q 010654 261 GSDPLLLYGYGSYEICND------PAF-NSSR---LSLLDRGFIFAIAQIRGGGELGRQWYENG------K-FLKKKNTF 323 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~------~~~-~~~~---~~l~~~G~~v~~~d~rG~~~~g~~~~~~~------~-~~~~~~~~ 323 (505)
.+.++||++|+-.++... ++| ...+ ..+--.-|-|+++|.-|++.......... . .......+
T Consensus 37 ~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti 116 (357)
T d2b61a1 37 EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVV 116 (357)
T ss_dssp TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCH
T ss_pred CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCCCCCCCcccccchh
Confidence 456899999986544322 122 2111 23333569999999998753211111000 0 12223678
Q ss_pred HHHHHHHHHHHHcCCCCCCcE-EEEeeChHHHHHHHHHhhCCCceeEEEecCCch---hhhhh--------c-cC-----
Q 010654 324 TDFIACAEYLIKNCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---DVLTT--------M-LD----- 385 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~---d~~~~--------~-~~----- 385 (505)
.|..++-.-|+++-.| +|+ +|+|+||||..++..+.++|+++..+|+.++-. .+... + .+
T Consensus 117 ~D~v~aq~~Ll~~LGI--~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~ 194 (357)
T d2b61a1 117 QDIVKVQKALLEHLGI--SHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNG 194 (357)
T ss_dssp HHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGG
T ss_pred HHHHHHHHHHHHHhCc--ceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHHHHHHHcCCCCCC
Confidence 9999988888876444 566 788999999999999999999999888776521 10000 0 00
Q ss_pred -----CCCCC---------------Ccccc-cccCCC----------------------------CCHHHHHH----HHh
Q 010654 386 -----PTIPL---------------TTAEW-EEWGDP----------------------------WKEEFYFY----MKS 412 (505)
Q Consensus 386 -----~~~~~---------------~~~~~-~~~g~~----------------------------~~~~~~~~----~~~ 412 (505)
...|. ....+ ..++.. -++..|-. +..
T Consensus 195 G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~ 274 (357)
T d2b61a1 195 GDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDM 274 (357)
T ss_dssp GCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhh
Confidence 01110 00000 001110 01111111 111
Q ss_pred CChh-------hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 413 YSPV-------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 413 ~sp~-------~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
.++. ..+.+|++| +|++..+.|...|+++.+++++.|+..++.++++.++. ..||.
T Consensus 275 ~D~~~~~~~l~~aL~~I~a~-vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S--~~GHd 337 (357)
T d2b61a1 275 YDPSLGYENVKEALSRIKAR-YTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPS--DYGHD 337 (357)
T ss_dssp CCTTTTSSCHHHHHTTCCSE-EEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECC--TTGGG
T ss_pred cccccccccHHHHHhhcCCC-EEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECC--CCCcc
Confidence 1211 225788887 99999999999999999999999999999988888884 46883
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.15 E-value=7.5e-11 Score=114.18 Aligned_cols=118 Identities=15% Similarity=0.068 Sum_probs=84.3
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCC------cEEEEEcccCCCCCchhHHHccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG------FIFAIAQIRGGGELGRQWYENGK 315 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G------~~v~~~d~rG~~~~g~~~~~~~~ 315 (505)
||.+||..-. ... .+..|.||++||.|++... |......|++.| |.|++||.||.|.+...
T Consensus 90 ~G~~iHf~h~-~~~----~~~~~pLlLlHG~P~s~~~--w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P------ 156 (394)
T d1qo7a_ 90 EGLTIHFAAL-FSE----REDAVPIALLHGWPGSFVE--FYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGP------ 156 (394)
T ss_dssp TTEEEEEEEE-CCS----CTTCEEEEEECCSSCCGGG--GHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCC------
T ss_pred CCEEEEEEEE-ecc----CCCCCEEEEeccccccHHH--HHHHHHhhccccCCcccceeeecccccccCCCCCC------
Confidence 8999986423 221 2456889999999987543 667778899988 99999999998876431
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 316 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
.........++.+.+..|...-. .++..++|+|+||.++..++..+|+.+.+++...
T Consensus 157 ~~~~~y~~~~~a~~~~~l~~~lg--~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~ 213 (394)
T d1qo7a_ 157 PLDKDFGLMDNARVVDQLMKDLG--FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNL 213 (394)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHTT--CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCccCHHHHHHHHHHHHhhcc--CcceEEEEecCchhHHHHHHHHhhccccceeEee
Confidence 11122445566666666555432 2577789999999999999988899888777653
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.11 E-value=2.3e-10 Score=97.46 Aligned_cols=153 Identities=15% Similarity=0.057 Sum_probs=97.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.| ||++||..+.. ..|......|.++||.|+.++.+|.+....... ...+++.+.++.+.++. ..+
T Consensus 3 ~P-Vv~vHG~~~~~--~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~i~~~~~~~--~~~ 68 (179)
T d1ispa_ 3 NP-VVMVHGIGGAS--FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY---------NNGPVLSRFVQKVLDET--GAK 68 (179)
T ss_dssp CC-EEEECCTTCCG--GGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH---------HHHHHHHHHHHHHHHHH--CCS
T ss_pred CC-EEEECCCCCCH--HHHHHHHHHHHHcCCeEEEEecCCccccccccc---------hhhhhHHHHHHHHHHhc--CCc
Confidence 35 56789976543 346667788999999999999887665422111 23455666666665542 346
Q ss_pred cEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhccc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVK 420 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~ 420 (505)
++.++||||||.++..++.++ +++++.+|..++........ .+ +.. + .
T Consensus 69 ~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~---~l------------~~~----------~-----~ 118 (179)
T d1ispa_ 69 KVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---AL------------PGT----------D-----P 118 (179)
T ss_dssp CEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB---CC------------CCS----------C-----T
T ss_pred eEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh---hc------------CCc----------c-----c
Confidence 899999999999999988776 57888888876643211000 00 000 0 0
Q ss_pred CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 421 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 421 ~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
.... +++.++|..|..|++..+. + . ..+.+.++ +.+|..
T Consensus 119 ~~~~-~~~~i~~~~D~~v~~~~~~-----l--~--~~~~~~~~---~~~H~~ 157 (179)
T d1ispa_ 119 NQKI-LYTSIYSSADMIVMNYLSR-----L--D--GARNVQIH---GVGHIG 157 (179)
T ss_dssp TCCC-EEEEEEETTCSSSCHHHHC-----C--B--TSEEEEES---SCCTGG
T ss_pred ccCc-eEEEEEecCCcccCchhhc-----C--C--CceEEEEC---CCCchh
Confidence 1134 4999999999999875431 1 1 23445666 779954
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.09 E-value=2.7e-09 Score=100.12 Aligned_cols=246 Identities=16% Similarity=0.181 Sum_probs=139.7
Q ss_pred ECCCCceee-EEEEEeCCccCCCCCCcEEEEEcCCCCcCCC----------CCCc-h---hHHHHHHCCcEEEEEcccCC
Q 010654 239 SASDGTQIP-ICIVYRKNLVKLDGSDPLLLYGYGSYEICND----------PAFN-S---SRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 239 ~s~dG~~i~-~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~----------~~~~-~---~~~~l~~~G~~v~~~d~rG~ 303 (505)
+...|..|+ +.|.|-.-..-...+.++||++|+-.+++.. ++|- . .-..+--.-|-|+++|.-|+
T Consensus 17 ~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~ 96 (362)
T d2pl5a1 17 ILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGG 96 (362)
T ss_dssp ECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTC
T ss_pred ecCCCCCcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccC
Confidence 344565553 4444432110012346999999986544321 2221 1 11234445699999999987
Q ss_pred CCC--chhHHHcc----cc-cCCcchHHHHHHHHHHHHHcCCCCCCcE-EEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 304 GEL--GRQWYENG----KF-LKKKNTFTDFIACAEYLIKNCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 304 ~~~--g~~~~~~~----~~-~~~~~~~~D~~~~~~~l~~~~~~d~~rv-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
+.. |..-.... ++ ......+.|+.++-..|.++-.| +|+ +|+|+||||..++..+.++|++++.+|..++
T Consensus 97 ~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI--~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~ 174 (362)
T d2pl5a1 97 CKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGI--EKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAS 174 (362)
T ss_dssp SSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTC--SSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESC
T ss_pred cccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCc--CeeEEEeehhHHHHHHHHHHHhCchHhhhhccccc
Confidence 642 11100000 01 12235789988888777776445 344 4789999999999999999999999888765
Q ss_pred chhh----------hhh-c----------cCCCCC--------------------------------------CCccccc
Q 010654 376 FVDV----------LTT-M----------LDPTIP--------------------------------------LTTAEWE 396 (505)
Q Consensus 376 ~~d~----------~~~-~----------~~~~~~--------------------------------------~~~~~~~ 396 (505)
-... ... . +.+..| .....|.
T Consensus 175 sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl 254 (362)
T d2pl5a1 175 TAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYL 254 (362)
T ss_dssp CSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGG
T ss_pred ccccCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHH
Confidence 2110 000 0 000000 0000010
Q ss_pred c-cCCC----CCHHHHHH----HHhCChh------hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 397 E-WGDP----WKEEFYFY----MKSYSPV------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 397 ~-~g~~----~~~~~~~~----~~~~sp~------~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
. .|.. .++..+-. +...++- ..+.+|++| +|+|..+.|..+|+++.+++++.|+.++++++++.
T Consensus 255 ~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~Ak-vLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~e 333 (362)
T d2pl5a1 255 IYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCR-FLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVE 333 (362)
T ss_dssp GSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSE-EEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCC-EEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEE
Confidence 0 0111 13332221 1222221 226788887 99999999999999999999999999999988887
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 462 FKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++. ..||...--....+.. .+-.||+
T Consensus 334 I~S--~~GHdaFL~e~~~~~~--~I~~FL~ 359 (362)
T d2pl5a1 334 LQS--GEGHDSFLLKNPKQIE--ILKGFLE 359 (362)
T ss_dssp ECC--CBSSGGGGSCCHHHHH--HHHHHHH
T ss_pred eCC--CCCcchhccCHHHHHH--HHHHHHc
Confidence 874 5788421111222322 3566764
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=98.97 E-value=3.4e-09 Score=99.94 Aligned_cols=135 Identities=10% Similarity=0.086 Sum_probs=85.8
Q ss_pred EECCCCceee-EEEEEeCCccC-CCCCCcEEEEEcCCCCcCCCCCCc-hh---HHHHHHCCcEEEEEcccCCCCC--chh
Q 010654 238 ASASDGTQIP-ICIVYRKNLVK-LDGSDPLLLYGYGSYEICNDPAFN-SS---RLSLLDRGFIFAIAQIRGGGEL--GRQ 309 (505)
Q Consensus 238 ~~s~dG~~i~-~~l~~p~~~~~-~~~~~P~iv~~hGg~~~~~~~~~~-~~---~~~l~~~G~~v~~~d~rG~~~~--g~~ 309 (505)
|+...|..|+ +.|.|-.-. + ...+.++||++|+-.+++...+|- .. -+.+--.-|-|+++|.-|++.. |..
T Consensus 18 F~le~G~~l~~~~laY~t~G-~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~ 96 (376)
T d2vata1 18 FTLESGVILRDVPVAYKSWG-RMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPC 96 (376)
T ss_dssp EECTTSCEEEEEEEEEEEES-CCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTT
T ss_pred EEeCCCCCcCCceEEEEeec-ccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCC
Confidence 5556677663 555554322 1 124579999999876655443332 11 1344445799999999987532 111
Q ss_pred HHH---ccc----ccCCcchHHHHHHHHHHHHHcCCCCCCcE-EEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 310 WYE---NGK----FLKKKNTFTDFIACAEYLIKNCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 310 ~~~---~~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~rv-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
-.. .+. .......+.|+..+-..|.+.-.| +|+ +|+|+||||..++..+.++|+++..+|..++
T Consensus 97 s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI--~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~ 168 (376)
T d2vata1 97 SPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGV--RQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIAT 168 (376)
T ss_dssp SBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTC--CCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESC
T ss_pred CCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCc--ceEEEeecccHHHHHHHHHHHhchHHHhhhccccc
Confidence 000 000 112236789999887777665333 565 6899999999999999999999988877655
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=98.93 E-value=2.5e-09 Score=99.89 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=75.2
Q ss_pred CCCcEEEEEcCCCCcCCC----CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc
Q 010654 261 GSDPLLLYGYGSYEICND----PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
.++|+ |++||..+.... ..|......|.++||.|+.+|+||.|.... .....+++.+.++.+++.
T Consensus 7 ~k~Pv-vlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~----------~~~~~~~l~~~i~~~~~~ 75 (319)
T d1cvla_ 7 TRYPV-ILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDG----------PNGRGEQLLAYVKQVLAA 75 (319)
T ss_dssp CSSCE-EEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTS----------TTSHHHHHHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCC----------CcccHHHHHHHHHHHHHH
Confidence 45785 568997654322 135566788999999999999998764321 112346666666665554
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
- +.++|.++|||+||.++..++.++|++++.+|..++
T Consensus 76 ~--~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~ 112 (319)
T d1cvla_ 76 T--GATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112 (319)
T ss_dssp H--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred h--CCCCEEEEeccccHHHHHHHHHHCccccceEEEECC
Confidence 2 347899999999999999999999999999988765
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=9.6e-10 Score=97.33 Aligned_cols=81 Identities=10% Similarity=0.040 Sum_probs=56.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
++.|+||++||..++.. .|......| .+|.|..+|++|.+. ..+++.+++..+. .
T Consensus 15 ~~~~~l~~lhg~~g~~~--~~~~la~~L--~~~~v~~~~~~g~~~----------------~a~~~~~~i~~~~-----~ 69 (230)
T d1jmkc_ 15 DQEQIIFAFPPVLGYGL--MYQNLSSRL--PSYKLCAFDFIEEED----------------RLDRYADLIQKLQ-----P 69 (230)
T ss_dssp TCSEEEEEECCTTCCGG--GGHHHHHHC--TTEEEEEECCCCSTT----------------HHHHHHHHHHHHC-----C
T ss_pred CCCCeEEEEcCCCCCHH--HHHHHHHHC--CCCEEeccCcCCHHH----------------HHHHHHHHHHHhC-----C
Confidence 44689999999876543 355544555 379999999987642 2355555554432 2
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDL 366 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~ 366 (505)
..++.|+|||+||.++..++.+.|++
T Consensus 70 ~~~~~lvGhS~GG~vA~~~A~~~~~~ 95 (230)
T d1jmkc_ 70 EGPLTLFGYSAGCSLAFEAAKKLEGQ 95 (230)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEeeccChHHHHHHHHhhhhh
Confidence 35789999999999999888776543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.87 E-value=9.8e-10 Score=110.57 Aligned_cols=130 Identities=17% Similarity=0.155 Sum_probs=87.4
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchh----HHHHHHCCcEEEEEcccCCC-CCchhHHHcccccC
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSS----RLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFLK 318 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~----~~~l~~~G~~v~~~d~rG~~-~~g~~~~~~~~~~~ 318 (505)
-+..-|+.|+.. ..+++.|+||++|||.-.... ..|+.. ...++.++.+|+.+|||-+. |+-.- ........
T Consensus 97 CL~LnI~~P~~~-~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~-~~~~~~~~ 174 (534)
T d1llfa_ 97 CLTINVVRPPGT-KAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAG-DDIKAEGS 174 (534)
T ss_dssp CCEEEEEECTTC-CTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCS-HHHHHHTC
T ss_pred CCEEEEEECCCC-CCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCC-cccccccc
Confidence 355677888766 567889999999998632221 123221 12345689999999999542 11100 00011124
Q ss_pred CcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCc
Q 010654 319 KKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPF 376 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~ 376 (505)
+...+.|+..|++|+.++ -.-||+||.|+|+|+||..+...+... ..+|+.+|+.+|.
T Consensus 175 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 456889999999999886 226999999999999999887665411 1369999998873
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=3.6e-09 Score=106.40 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=89.8
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
-+...|+.|... ....+.|++|++|||.-.... ..++. ....++++.+|+.+|||-+- +|--.. ......+...+
T Consensus 96 CL~LnI~~P~~~-~~~~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRLg~-~GFl~~-~~~~~~gN~Gl 171 (532)
T d2h7ca1 96 CLYLNIYTPADL-TKKNRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGI-WGFFST-GDEHSRGNWGH 171 (532)
T ss_dssp CCEEEEEECSCT-TSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHH-HHHCCC-SSTTCCCCHHH
T ss_pred CCEEEEEECCCC-CCCCCcEEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeeccCC-Cccccc-ccccccccccc
Confidence 355667788765 566789999999998533222 22322 24557789999999999532 111000 01123345789
Q ss_pred HHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCch
Q 010654 324 TDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFV 377 (505)
Q Consensus 324 ~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~ 377 (505)
.|...|++|+.++ -.-||++|.|+|+|+||..+...+.. ...+|+.+|+.+|..
T Consensus 172 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 172 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 9999999999885 23699999999999999988777653 234899999988754
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=98.83 E-value=6.6e-09 Score=95.56 Aligned_cols=102 Identities=16% Similarity=0.001 Sum_probs=74.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
.+.| ||++||.........|......|.++||.|+.+|++|.+... .....+++.++++++.+...
T Consensus 30 ~~~P-VvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d-----------~~~sae~la~~i~~v~~~~g-- 95 (317)
T d1tcaa_ 30 VSKP-ILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND-----------TQVNTEYMVNAITALYAGSG-- 95 (317)
T ss_dssp CSSE-EEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC-----------HHHHHHHHHHHHHHHHHHTT--
T ss_pred CCCc-EEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCc-----------hHhHHHHHHHHHHHHHHhcc--
Confidence 3445 677899654333222444567899999999999999765321 12345778888998877633
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPF 376 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~ 376 (505)
.++|.|+|||+||.++.+++.++|+ .++.+|...+-
T Consensus 96 ~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~ 134 (317)
T d1tcaa_ 96 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred CCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCC
Confidence 3689999999999999999998874 57777777664
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.81 E-value=5.8e-09 Score=104.33 Aligned_cols=130 Identities=17% Similarity=0.164 Sum_probs=86.8
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-CCCCCchhHHHHH-HCCcEEEEEcccCCCCCchhHH-HcccccCCcch
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-NDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGRQWY-ENGKFLKKKNT 322 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~g~~~~-~~~~~~~~~~~ 322 (505)
+..-|+.|+.. ...++.|++|++|||.-.. ....+......++ +.+.+|+.+|||-+. +|--.. .......+...
T Consensus 81 L~LnI~~P~~~-~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~-~GFl~~~~~~~~~~~N~G 158 (517)
T d1ukca_ 81 LFINVFKPSTA-TSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGA-LGFLASEKVRQNGDLNAG 158 (517)
T ss_dssp CEEEEEEETTC-CTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHH-HHHCCCHHHHHSSCTTHH
T ss_pred CEEEEEeCCCC-CCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccc-eeecCccccccccccchh
Confidence 55567888765 4557789999999985322 2223443333343 457899999999532 111000 00011223567
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh----CCCceeEEEecCCch
Q 010654 323 FTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM----RPDLFKAAVAAVPFV 377 (505)
Q Consensus 323 ~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~----~p~~~~a~v~~~~~~ 377 (505)
+.|...|++|+.++ -.-||++|.|+|+|+||..+...+.. ...+|+.+|+.+|..
T Consensus 159 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 159 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 89999999999886 23699999999999999988766543 124899999998853
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.81 E-value=4e-09 Score=104.62 Aligned_cols=128 Identities=16% Similarity=0.139 Sum_probs=86.6
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-CchhHH-HHHHCCcEEEEEcccCCCCCchhHHHcc-cccCCcc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRL-SLLDRGFIFAIAQIRGGGELGRQWYENG-KFLKKKN 321 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-~~~~~~-~l~~~G~~v~~~d~rG~~~~g~~~~~~~-~~~~~~~ 321 (505)
-+...++.|+.. ++++|++|++|||........ +..... ...+.+.+|+.+|||-+- +|--..... ....+..
T Consensus 81 CL~lni~~P~~~---~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~-~GFl~~~~~~~~~~gN~ 156 (483)
T d1qe3a_ 81 CLYVNVFAPDTP---SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGP-FGFLHLSSFDEAYSDNL 156 (483)
T ss_dssp CCEEEEEEECSS---CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHH-HHSCCCTTTCTTSCSCH
T ss_pred CCEEEEEECCCC---CCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccc-hhhcccccccccccccc
Confidence 456677788643 568999999999853322211 111123 344568999999999542 111000010 1223457
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCc
Q 010654 322 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPF 376 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~ 376 (505)
.+.|+..|++|+.++ -.-||++|.|+|+|+||..+..++... ..+|+.+|+.+|.
T Consensus 157 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs 216 (483)
T d1qe3a_ 157 GLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGA 216 (483)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCC
Confidence 799999999999886 235999999999999999988887631 2489999998874
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.77 E-value=3.5e-09 Score=106.63 Aligned_cols=128 Identities=20% Similarity=0.206 Sum_probs=87.7
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCC--chhH-HHH-HHCCcEEEEEcccCCC-CCc--hhHHHcccc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF--NSSR-LSL-LDRGFIFAIAQIRGGG-ELG--RQWYENGKF 316 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~--~~~~-~~l-~~~G~~v~~~d~rG~~-~~g--~~~~~~~~~ 316 (505)
-+...++.|++. ..++++|++|++|||.-.... ..+ .... ..+ +..+.+|+.+|||-+- ||- .+.. ..
T Consensus 105 CL~LnI~~P~~~-~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~---~~ 180 (544)
T d1thga_ 105 CLYLNVFRPAGT-KPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAIT---AE 180 (544)
T ss_dssp CCEEEEEEETTC-CTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHH---HH
T ss_pred CCEEEEEECCCC-CCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhh---cc
Confidence 456677888876 566789999999998532211 112 1211 233 4579999999999432 110 1111 11
Q ss_pred cCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCc
Q 010654 317 LKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPF 376 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~ 376 (505)
..+...+.|...|++|+.++ -.-||++|.|+|+|+||..+..++... ..+|+.+|+.+|.
T Consensus 181 ~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 181 GNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred ccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 23457899999999999886 236999999999999999888777531 2489999998874
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.76 E-value=1.6e-08 Score=92.28 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=71.9
Q ss_pred CCCCcEEEEEcCCCCcCCC---CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc
Q 010654 260 DGSDPLLLYGYGSYEICND---PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
..++| ||++||..+.... ..|......|.++||.|+.+|++|.+. .+. ..+++.+.++.+.+.
T Consensus 5 ~~~~P-vvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~---~~~----------~a~~l~~~i~~~~~~ 70 (285)
T d1ex9a_ 5 QTKYP-IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDT---SEV----------RGEQLLQQVEEIVAL 70 (285)
T ss_dssp CCSSC-EEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSC---HHH----------HHHHHHHHHHHHHHH
T ss_pred CCCCC-EEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCC---cHH----------HHHHHHHHHHHHHHH
Confidence 35688 7888996554322 235566788999999999999997553 221 124455555554443
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
. ..+++.++|||+||..+..++.++|++++.++..+.
T Consensus 71 ~--g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~t 107 (285)
T d1ex9a_ 71 S--GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107 (285)
T ss_dssp H--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred c--CCCeEEEEEECccHHHHHHHHHHCCccceeEEEECC
Confidence 2 236899999999999999999999999999887644
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.74 E-value=2.1e-07 Score=91.21 Aligned_cols=197 Identities=11% Similarity=0.018 Sum_probs=116.1
Q ss_pred ceEEEEECCCCCCCCeEEEEe----cCCceEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeeccccc----
Q 010654 8 DKAWLHKLEADQSNDICLYHE----KDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVG---- 78 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~----~~~~~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~---- 78 (505)
.+|+++++.++. ........ ....+...+.|+||++.++...++. ....++++|+++++ .+.+......
T Consensus 228 ~~l~v~d~~~~~-~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~-~~~~~~e~~~~wv~ 305 (465)
T d1xfda1 228 ISLHVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV-CTKKHEDESEAWLH 305 (465)
T ss_dssp EEEEEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC-EEEEEEEECSSCCC
T ss_pred eeEEEEecCCCc-EEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCc-EEEEEEEcCCceEe
Confidence 468999996542 22222211 1122445789999998766666654 45789999999997 6665433211
Q ss_pred ---eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC-----C-CCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCee
Q 010654 79 ---VDTAASHRGNHFFITRRSDELFNSELLACPVDN-----T-SETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQ 147 (505)
Q Consensus 79 ---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~ 147 (505)
....|++||+.++|+.........++|++.+.. . +..+ .+|........-+.|+. +.++|+++.++..
T Consensus 306 ~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~-~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~ 384 (465)
T d1xfda1 306 RQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ-SITSGDWDVTKILAYDEKGNKIYFLSTEDLPR 384 (465)
T ss_dssp CCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC-BSCCSSSCEEEEEEEETTTTEEEEEESSSCTT
T ss_pred ccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeE-EeccCCceEEEEEEEcCCCCEEEEEEeCCCCC
Confidence 123499999988776432222335677665421 0 1122 45554332233335655 5899988876555
Q ss_pred EEEEEEcCCCCC-cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 148 KITTYRLPAVGE-PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 148 ~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.++|.++.+|. ..++|++... ..+. ...+++|++++.++.+++++..|. ..+++..+++
T Consensus 385 ~~hly~v~l~g~~~~~~lt~~~~---~~~~--~~~~~~S~~~~y~v~~~s~~~~P~-~~~~~~~~~~ 445 (465)
T d1xfda1 385 RRQLYSANTVGNFNRQCLSCDLV---ENCT--YFSASFSHSMDFFLLKCEGPGVPM-VTVHNTTDKK 445 (465)
T ss_dssp CCEEEEECSSTTCCCBCSSTTSS---SSCC--CCEEEECTTSSEEEEECCSSSSCC-EEEEETTTCC
T ss_pred ceEEEEEECCCCCcceeeccccC---CCCC--EEEEEECCCCCEEEEEeecCCCCe-EEEEECCCCC
Confidence 555666655444 3455554211 1222 122467899999999999998887 5566666665
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.73 E-value=8.2e-09 Score=103.95 Aligned_cols=127 Identities=16% Similarity=0.139 Sum_probs=86.0
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCc---CCCCCCchhHHHH-HHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEI---CNDPAFNSSRLSL-LDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~---~~~~~~~~~~~~l-~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
-+...|+.|.. ...+++|++|++|||.-. .....+.. ..+ ++.+.+|+.+|||-+. +|--.........+.
T Consensus 96 CL~LnI~~P~~--~~~~~lPV~v~ihGG~~~~gs~~~~~~~~--~~~~~~~~vvvVt~nYRlg~-~Gfl~~~~~~~~~gN 170 (542)
T d2ha2a1 96 CLYLNVWTPYP--RPASPTPVLIWIYGGGFYSGAASLDVYDG--RFLAQVEGAVLVSMNYRVGT-FGFLALPGSREAPGN 170 (542)
T ss_dssp CCEEEEEEESS--CCSSCEEEEEEECCSTTTCCCTTSGGGCT--HHHHHHHCCEEEEECCCCHH-HHHCCCTTCSSCCSC
T ss_pred CCEEEEEecCC--CCCCCCcEEEEEEECccccccCcccccCc--hhhhhhccceeEeeeeeccc-eeeecccccccCCCc
Confidence 35566677865 345789999999998532 22222222 334 4579999999999421 111000011123345
Q ss_pred chHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCc
Q 010654 321 NTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPF 376 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~ 376 (505)
..+.|+..|++|+.++ -.-||++|.|+|+|+||..+..++... ..+|..+|+.+|.
T Consensus 171 ~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~ 231 (542)
T d2ha2a1 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGT 231 (542)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCC
T ss_pred CCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccc
Confidence 6799999999999876 235999999999999999988877642 1489999988774
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=4.6e-07 Score=88.75 Aligned_cols=94 Identities=12% Similarity=0.256 Sum_probs=64.9
Q ss_pred eEEEEECCCCCCCCeEEEEecC-CceE-EEEEEeCCCcEEEEEeccc------cceEEEEEeCCCCCceeeeeccccc--
Q 010654 9 KAWLHKLEADQSNDICLYHEKD-DIYS-LGLQASESKKFLFIASESK------ITRFVFYLDVSKPEELRVLTPRVVG-- 78 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~-~~~~-~~~~~SpDg~~i~~~~~~~------~~~~l~~~d~~~~~~~~~l~~~~~~-- 78 (505)
.++++++.++. ...++.... ..+. ....+||||++|++..+.. ....+|++|+.++. .+.|.+....
T Consensus 38 ~i~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~-~~~l~~~~~~~~ 114 (465)
T d1xfda1 38 TVRLWNVETNT--STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD-PQSLDPPEVSNA 114 (465)
T ss_dssp CEEEBCGGGCC--CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC-CEECCCTTCCSC
T ss_pred cEEEEECCCCC--EEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCc-eeeccCccCCcc
Confidence 58999998763 344444222 2222 2567999999999886532 24689999999997 7777644322
Q ss_pred -eeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 79 -VDT-AASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 79 -~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..+ .|||||++|+|+.+. .||+.+..+
T Consensus 115 ~l~~~~wSPDG~~iafv~~~------nl~~~~~~~ 143 (465)
T d1xfda1 115 KLQYAGWGPKGQQLIFIFEN------NIYYCAHVG 143 (465)
T ss_dssp CCSBCCBCSSTTCEEEEETT------EEEEESSSS
T ss_pred ccceeeeccCCceEEEEecc------eEEEEecCC
Confidence 122 399999999999853 688888765
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.71 E-value=8.9e-09 Score=103.42 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=86.0
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCC---cCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYE---ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~---~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 321 (505)
-+...|+.|... .++.|++|++|||.- +.....+.. ....++++.+|+.+|||-+- +|--.........+..
T Consensus 91 CL~LnI~~P~~~---~~~lPV~v~ihGG~~~~g~~~~~~~~~-~~~~~~~~vvvVt~nYRlg~-~GFl~~~~~~~~~gN~ 165 (532)
T d1ea5a_ 91 CLYLNIWVPSPR---PKSTTVMVWIYGGGFYSGSSTLDVYNG-KYLAYTEEVVLVSLSYRVGA-FGFLALHGSQEAPGNV 165 (532)
T ss_dssp CCEEEEEECSSC---CSSEEEEEEECCSTTTCCCTTCGGGCT-HHHHHHHTCEEEECCCCCHH-HHHCCCTTCSSSCSCH
T ss_pred CCEEEEEeCCCC---CCCCcEEEEEEcCCcccccCCccccCc-chhhcccCccEEEEeecccc-ccccccccccCCCCcc
Confidence 355566778643 467899999999852 222222222 23456789999999999532 1110001111233456
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCch
Q 010654 322 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFV 377 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 377 (505)
.+.|...|++|+.++ -.-||++|.|+|+|+||..+..++... ..+|+.+|+.++..
T Consensus 166 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 166 GLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 899999999999886 236999999999999999887776631 24899999887643
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=2.3e-08 Score=100.20 Aligned_cols=126 Identities=16% Similarity=0.091 Sum_probs=84.2
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCc---CCCCCCchhHHHH-HHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEI---CNDPAFNSSRLSL-LDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~---~~~~~~~~~~~~l-~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
-+...|+.|... .++.|++|++|||.-. .....+. ...+ ++.+.+|+.+|||-+- +|---........+.
T Consensus 89 CL~lnI~~P~~~---~~~~PV~v~ihGG~~~~gs~~~~~~~--~~~~~~~~~vVvVt~nYRlg~-~Gfl~~~~~~~~~gN 162 (526)
T d1p0ia_ 89 CLYLNVWIPAPK---PKNATVLIWIYGGGFQTGTSSLHVYD--GKFLARVERVIVVSMNYRVGA-LGFLALPGNPEAPGN 162 (526)
T ss_dssp CCEEEEEEESSC---CSSEEEEEEECCSTTTSCCTTCGGGC--THHHHHHHCCEEEEECCCCHH-HHHCCCTTCTTSCSC
T ss_pred CCEEEEEeCCCC---CCCCceEEEEECCCcccccCcccccC--ccccccccceeEEeccccccc-ccccCCCCccccccc
Confidence 355566778643 4678999999998532 2222222 2334 4569999999999531 110000011123455
Q ss_pred chHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCc
Q 010654 321 NTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPF 376 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 376 (505)
..+.|...|++|+.++ -.-||++|.|+|+|+||..+..++.. ...+|+.+|+.++-
T Consensus 163 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~ 223 (526)
T d1p0ia_ 163 MGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGS 223 (526)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCC
T ss_pred ccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccc
Confidence 6899999999999875 23599999999999999998777653 22488888887664
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.66 E-value=8e-09 Score=94.65 Aligned_cols=214 Identities=12% Similarity=0.052 Sum_probs=106.4
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCC
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCY 338 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~ 338 (505)
....|.++++||.........|......|. .++.|+.++++|.+...... .......++++.+.+ +.+....
T Consensus 57 ~~~~~~l~c~~~~~~~g~~~~y~~la~~L~-~~~~V~al~~pG~~~~~~~~-----~~~~~~s~~~~a~~~~~~i~~~~- 129 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTG-----TALLPADLDTALDAQARAILRAA- 129 (283)
T ss_dssp -CCCCEEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---C-----BCCEESSHHHHHHHHHHHHHHHH-
T ss_pred CCCCceEEEeCCCCCCCCHHHHHHHHHhcC-CCceEEEEeCCCCCCCCCCc-----cccccCCHHHHHHHHHHHHHHhc-
Confidence 345689999998432222333544334443 46899999999877533211 111223456655533 3343321
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhC----CCceeEEEecCCchhhhhhccCCCCCCCcccc--cccCCCCCHHH---HHH
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMR----PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW--EEWGDPWKEEF---YFY 409 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~----p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~--~~~g~~~~~~~---~~~ 409 (505)
....+.++|||+||.++..++.+. ++...+.+...+..-................. .......+... ...
T Consensus 130 -~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~ 208 (283)
T d2h7xa1 130 -GDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRY 208 (283)
T ss_dssp -TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHH
T ss_pred -CCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHH
Confidence 225788999999999998888754 34566666554321100000000000000000 00111111111 111
Q ss_pred HHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHH
Q 010654 410 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS-KSGRFERLREAAFTYT 488 (505)
Q Consensus 410 ~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~~ 488 (505)
+. .........+++| +|+++|++|..++......+.+. ....++.+.++ | +|.. .....+.+ ...+.+
T Consensus 209 ~~-~~~~~~~~~~~~P-vl~i~g~~d~~~~~~~~~~w~~~---~~~~~~~~~v~---G-~H~~ml~e~~~~v--A~~i~~ 277 (283)
T d2h7xa1 209 AR-FLAGPRPGRSSAP-VLLVRASEPLGDWQEERGDWRAH---WDLPHTVADVP---G-DHFTMMRDHAPAV--AEAVLS 277 (283)
T ss_dssp HH-HHHSCCCCCCCSC-EEEEEESSCSSCCCGGGCCCSCC---CSSCSEEEEES---S-CTTHHHHTTHHHH--HHHHHH
T ss_pred HH-HHhhccccccCCC-eEEEEeCCCCCCCHHHHHHHHHh---CCCCcEEEEEc---C-CCcccccCCHHHH--HHHHHH
Confidence 11 1111223566887 99999999999988766544222 12345666665 4 7853 22222222 224677
Q ss_pred HHHH
Q 010654 489 FLMR 492 (505)
Q Consensus 489 fl~~ 492 (505)
||+.
T Consensus 278 ~L~~ 281 (283)
T d2h7xa1 278 WLDA 281 (283)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.62 E-value=9.4e-07 Score=82.54 Aligned_cols=165 Identities=12% Similarity=0.113 Sum_probs=100.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
.+||+|++.++ ..+.+ ....-...++|||||++|++..... ...|+++|++++. .+.+........ ..||||
T Consensus 24 g~v~v~d~~~~--~~~~~---~~~~~v~~~~~spDg~~l~~~~~~~-g~~v~v~d~~~~~-~~~~~~~~~~v~~~~~spd 96 (360)
T d1k32a3 24 GQAFIQDVSGT--YVLKV---PEPLRIRYVRRGGDTKVAFIHGTRE-GDFLGIYDYRTGK-AEKFEENLGNVFAMGVDRN 96 (360)
T ss_dssp TEEEEECTTSS--BEEEC---SCCSCEEEEEECSSSEEEEEEEETT-EEEEEEEETTTCC-EEECCCCCCSEEEEEECTT
T ss_pred CeEEEEECCCC--cEEEc---cCCCCEEEEEECCCCCEEEEEEcCC-CCEEEEEECCCCc-EEEeeCCCceEEeeeeccc
Confidence 47999999654 23333 2233345789999999998876543 2358999999986 777776654433 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecC-------CeeEEEEEEcCCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREG-------GLQKITTYRLPAV 157 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~-------~~~~l~~~~~~~~ 157 (505)
|++|+..+.. ..++.+++++ +.....+... ...+..+.|++|+ +++..... ....+.++++..
T Consensus 97 g~~l~~~~~~-----~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~- 168 (360)
T d1k32a3 97 GKFAVVANDR-----FEIMTVDLET-GKPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG- 168 (360)
T ss_dssp SSEEEEEETT-----SEEEEEETTT-CCEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-
T ss_pred ccccceeccc-----cccccccccc-cceeeeeecc-cccccchhhccceeeeeeeccccccceeeccccceeeecccc-
Confidence 9999988754 3788888876 3333233333 3346678888874 44443322 234577888753
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEe
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYS 196 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (505)
+....+. ..........++++++.+++...
T Consensus 169 -~~~~~~~--------~~~~~~~~~~~spdg~~l~~~s~ 198 (360)
T d1k32a3 169 -RKIFAAT--------TENSHDYAPAFDADSKNLYYLSY 198 (360)
T ss_dssp -TEEEECS--------CSSSBEEEEEECTTSCEEEEEES
T ss_pred -Cceeeec--------ccccccccccccCCCCEEEEEeC
Confidence 2221111 11111112346788887766543
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.61 E-value=2.6e-08 Score=100.88 Aligned_cols=129 Identities=17% Similarity=0.210 Sum_probs=85.6
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCC---CcCCCCCCc----hhHHHHHHC-CcEEEEEcccCCCCCchhHHHc-cc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFN----SSRLSLLDR-GFIFAIAQIRGGGELGRQWYEN-GK 315 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~---~~~~~~~~~----~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~-~~ 315 (505)
-+...|+.|......+++.|+||++|||. ++.....+. .....++.. +.+|+.+|||-+- +| |... ..
T Consensus 80 CL~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~-~G--Fl~~~~~ 156 (579)
T d2bcea_ 80 CLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP-LG--FLSTGDS 156 (579)
T ss_dssp CCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHH-HH--HCCCSST
T ss_pred CCEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccc-cc--ccccccc
Confidence 45666788875413346799999999984 222221121 112456654 6999999999532 22 1111 11
Q ss_pred ccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCc
Q 010654 316 FLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPF 376 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~ 376 (505)
...+...+.|...|++|+.++ -.-||+||.|+|+|+||..+...+.. ...+|+.+|+.+|.
T Consensus 157 ~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs 222 (579)
T d2bcea_ 157 NLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCC
Confidence 233557899999999999886 23699999999999999988876653 23589999998874
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.57 E-value=1.1e-07 Score=96.13 Aligned_cols=116 Identities=21% Similarity=0.144 Sum_probs=79.5
Q ss_pred CCCCCcEEEEEcCCCC---cCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhH------HHcccccCCcchHHHHHH
Q 010654 259 LDGSDPLLLYGYGSYE---ICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQW------YENGKFLKKKNTFTDFIA 328 (505)
Q Consensus 259 ~~~~~P~iv~~hGg~~---~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~------~~~~~~~~~~~~~~D~~~ 328 (505)
..++.|++|++|||.- +...+.+.. ..|++. +.+|+.+|||-+- +|--. ........+...+.|...
T Consensus 135 ~~~~lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRlg~-fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~ 211 (571)
T d1dx4a_ 135 TTNGLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGA-FGFLHLAPEMPSEFAEEAPGNVGLWDQAL 211 (571)
T ss_dssp CCSSEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTH-HHHCCCGGGSCGGGTTSSCSCHHHHHHHH
T ss_pred CCCCCeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeecceecc-ccccccccccccccccCCCCcccchHHHH
Confidence 3578999999999852 222233332 455554 6899999999542 11100 001122345578999999
Q ss_pred HHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCch
Q 010654 329 CAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFV 377 (505)
Q Consensus 329 ~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~~ 377 (505)
|++|+.++ -.-||+||.|+|+|+||..+...+... ..+|+.+|+.++..
T Consensus 212 AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 212 AIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 99999886 235999999999999999988776542 24799988877743
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.47 E-value=5.8e-07 Score=69.76 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=63.9
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
|...+|.+|+... .++.|.||++||.... |. ...+++|.|+.+|.||.|.+..
T Consensus 5 ~~~~~G~~l~y~~---------~G~G~pvlllHG~~~~-----w~----~~L~~~yrvi~~DlpG~G~S~~--------- 57 (122)
T d2dsta1 5 YLHLYGLNLVFDR---------VGKGPPVLLVAEEASR-----WP----EALPEGYAFYLLDLPGYGRTEG--------- 57 (122)
T ss_dssp EEEETTEEEEEEE---------ECCSSEEEEESSSGGG-----CC----SCCCTTSEEEEECCTTSTTCCC---------
T ss_pred EEEECCEEEEEEE---------EcCCCcEEEEeccccc-----cc----ccccCCeEEEEEeccccCCCCC---------
Confidence 3345777776542 1456889999985322 21 1235799999999999886522
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~ 365 (505)
.....+++.+.+..+++.- +-++..|+|+|+||.++..+++..+.
T Consensus 58 -p~~s~~~~a~~i~~ll~~L--~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 58 -PRMAPEELAHFVAGFAVMM--NLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp -CCCCHHHHHHHHHHHHHHT--TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred -cccccchhHHHHHHHHHHh--CCCCcEEEEeCccHHHHHHHHhhccc
Confidence 1233455555555555442 23678899999999999999886543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.44 E-value=2.4e-06 Score=79.70 Aligned_cols=155 Identities=12% Similarity=0.020 Sum_probs=95.7
Q ss_pred EEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 37 LQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 37 ~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
.++|| ||++|++... .+||++|++++. .+++.+...-....|||||+.|++.+.+++ ..|++.|+++ +..
T Consensus 8 ~~fSP~dG~~~a~~~~----g~v~v~d~~~~~-~~~~~~~~~v~~~~~spDg~~l~~~~~~~g---~~v~v~d~~~-~~~ 78 (360)
T d1k32a3 8 EDFSPLDGDLIAFVSR----GQAFIQDVSGTY-VLKVPEPLRIRYVRRGGDTKVAFIHGTREG---DFLGIYDYRT-GKA 78 (360)
T ss_dssp EEEEECGGGCEEEEET----TEEEEECTTSSB-EEECSCCSCEEEEEECSSSEEEEEEEETTE---EEEEEEETTT-CCE
T ss_pred ccccCCCCCEEEEEEC----CeEEEEECCCCc-EEEccCCCCEEEEEECCCCCEEEEEEcCCC---CEEEEEECCC-CcE
Confidence 46899 9999988654 479999999886 777654332223459999999999887632 3688889876 444
Q ss_pred eEEEcCCCCceeeEEEEeCCEEEEE-EecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEE
Q 010654 116 TVLIPHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFH 194 (505)
Q Consensus 116 ~~~~~~~~~~~i~~~~~~~d~l~~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (505)
. .+..... .+..+.|++|+-+++ ...++ .++++++.. +. ... .+. .....+..+.++++++.+++.
T Consensus 79 ~-~~~~~~~-~v~~~~~spdg~~l~~~~~~~--~~~~~~~~~-~~-~~~-----~~~--~~~~~~~~~~~spdg~~la~~ 145 (360)
T d1k32a3 79 E-KFEENLG-NVFAMGVDRNGKFAVVANDRF--EIMTVDLET-GK-PTV-----IER--SREAMITDFTISDNSRFIAYG 145 (360)
T ss_dssp E-ECCCCCC-SEEEEEECTTSSEEEEEETTS--EEEEEETTT-CC-EEE-----EEE--CSSSCCCCEEECTTSCEEEEE
T ss_pred E-EeeCCCc-eEEeeeecccccccceecccc--ccccccccc-cc-eee-----eee--cccccccchhhccceeeeeee
Confidence 4 3443333 467889998753333 33333 467787763 22 111 111 111122335678899988877
Q ss_pred EecCCC------CceEEEEECCCCc
Q 010654 195 YSSLRT------PPSVYDYDMDMGI 213 (505)
Q Consensus 195 ~~~~~~------p~~~~~~~~~~~~ 213 (505)
...... -..+++.+..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~v~d~~~~~ 170 (360)
T d1k32a3 146 FPLKHGETDGYVMQAIHVYDMEGRK 170 (360)
T ss_dssp EEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ccccccceeeccccceeeeccccCc
Confidence 655332 1246667776654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.38 E-value=2.6e-06 Score=76.42 Aligned_cols=117 Identities=10% Similarity=0.120 Sum_probs=81.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
..+++.++.++. ...+.. .......+.|||||+++++.........+++++..++. .+.+..........|||||
T Consensus 151 ~~i~~~~~~~~~--~~~~~~--~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~p~~SPDG 225 (269)
T d2hqsa1 151 PQVYKVNINGGA--PQRITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-VQVLSSTFLDETPSLAPNG 225 (269)
T ss_dssp CEEEEEETTSSC--CEECCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC-EEECCCSSSCEEEEECTTS
T ss_pred ceEeeeeccccc--ceeeec--ccccccccccccccceeEEEeecCCceeeeEeeccccc-ceEeecCccccceEECCCC
Confidence 468888886642 233322 23345578999999999999888778899999998875 5444332222234599999
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI 134 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 134 (505)
++|+|.++.+ ...+||++++++ +... .++... ..+..++|++
T Consensus 226 ~~i~f~s~~~--~~~~l~~~~~dg-~~~~-~lt~~~-g~~~~p~WSP 267 (269)
T d2hqsa1 226 TMVIYSSSQG--MGSVLNLVSTDG-RFKA-RLPATD-GQVKFPAWSP 267 (269)
T ss_dssp SEEEEEEEET--TEEEEEEEETTS-CCEE-ECCCSS-SEEEEEEECC
T ss_pred CEEEEEEcCC--CCcEEEEEECCC-CCEE-EEeCCC-CcEEeEEeCC
Confidence 9999998764 346999999987 4443 455443 3566788875
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.25 E-value=2e-06 Score=77.45 Aligned_cols=92 Identities=10% Similarity=-0.003 Sum_probs=64.1
Q ss_pred EEeCC--CcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCC-CCceEEEeeCCCCC
Q 010654 38 QASES--KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDEL-FNSELLACPVDNTS 113 (505)
Q Consensus 38 ~~SpD--g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~-~~~~l~~~~~~~~~ 113 (505)
.+||| |++|+|.... +||++|+++++ .++|+....... ..|||||++|+|.++.++. ...+|+++++.+ +
T Consensus 5 ~~sPdi~G~~v~f~~~~----dl~~~d~~~g~-~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~-g 78 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCCD----DLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN-G 78 (281)
T ss_dssp CEEEEEETTEEEEEETT----EEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT-T
T ss_pred ccCCCCCCCEEEEEeCC----cEEEEECCCCC-EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecC-C
Confidence 35788 9999998653 69999999997 999987653333 3499999999999875432 345899999876 4
Q ss_pred CceEEEcCCCC------ceeeEEEEeCCE
Q 010654 114 ETTVLIPHRES------VKLQDIQLFIDH 136 (505)
Q Consensus 114 ~~~~~~~~~~~------~~i~~~~~~~d~ 136 (505)
... .++.... .....+.|++|+
T Consensus 79 ~~~-~lt~~~~~~~~~~~~~~~~~~spdg 106 (281)
T d1k32a2 79 EIK-RITYFSGKSTGRRMFTDVAGFDPDG 106 (281)
T ss_dssp EEE-ECCCCCEEEETTEECSEEEEECTTC
T ss_pred ceE-EeeecCCCccCccccccccccCCCC
Confidence 433 4443321 122356677763
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.23 E-value=3.8e-05 Score=74.78 Aligned_cols=171 Identities=12% Similarity=0.007 Sum_probs=101.7
Q ss_pred ceEEEEEEeCCCcEEEEEecccc---ceEEEEEeCCCCCceeeeecccc------c-------eeEEeeeeCCEE-EEEE
Q 010654 32 IYSLGLQASESKKFLFIASESKI---TRFVFYLDVSKPEELRVLTPRVV------G-------VDTAASHRGNHF-FITR 94 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~~~---~~~l~~~d~~~~~~~~~l~~~~~------~-------~~~~~s~dg~~l-~~~~ 94 (505)
.+...+.|+++++.+++..++.. ...++.+|..++. .+.+..... + ....++++++.. ++.+
T Consensus 260 ~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s 338 (470)
T d2bgra1 260 HYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGR-WNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (470)
T ss_dssp EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTE-EEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred ceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCc-EEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEe
Confidence 34557899999987776655432 3467777888775 554431110 0 112366666654 4555
Q ss_pred cCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCC----eeEEEEEEcCCCCCcccccCCCcee
Q 010654 95 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGG----LQKITTYRLPAVGEPLKSLQGGKSV 170 (505)
Q Consensus 95 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~----~~~l~~~~~~~~~~~~~~l~~~~~~ 170 (505)
..++ ..+||+++.++ +... .++........-+.++++.++|+++..+ ..+|+.+++.. +...++|++..
T Consensus 339 ~~dg--~~~ly~~~~~g-~~~~-~lt~g~~~v~~~~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g-~~~~~~lt~~~-- 411 (470)
T d2bgra1 339 NEEG--YRHICYFQIDK-KDCT-FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSD-YTKVTCLSCEL-- 411 (470)
T ss_dssp CTTS--CEEEEEEETTC-SCCE-ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTC-TTCEEESSTTT--
T ss_pred ccCc--CceeEEEeccC-Ccee-eeccCCeeEEEEEEECCCEEEEEEecCCCCcceEEEEEEECCC-CCceeEecccc--
Confidence 5533 36999999876 5555 4554444334445667789988886543 22455555542 23455554311
Q ss_pred eccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 171 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
......+..+++|||++.++.+++++..|.. .+++..+++
T Consensus 412 --~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~-~l~~~~~g~ 451 (470)
T d2bgra1 412 --NPERCQYYSVSFSKEAKYYQLRCSGPGLPLY-TLHSSVNDK 451 (470)
T ss_dssp --STTTBCBEEEEECTTSSEEEEEECSBSSCEE-EEEETTTTE
T ss_pred --cCCCCCEEEEEECCCCCEEEEEecCCCCCeE-EEEECCCCC
Confidence 1111112235678999999999999999985 556666665
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.17 E-value=8.1e-06 Score=79.73 Aligned_cols=94 Identities=11% Similarity=0.022 Sum_probs=68.0
Q ss_pred eEEEEECCCCCCCCeEEEEecC----CceEEEEEEeCCCcEEEEEeccc------cceEEEEEeCCCCCceeeeeccccc
Q 010654 9 KAWLHKLEADQSNDICLYHEKD----DIYSLGLQASESKKFLFIASESK------ITRFVFYLDVSKPEELRVLTPRVVG 78 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~----~~~~~~~~~SpDg~~i~~~~~~~------~~~~l~~~d~~~~~~~~~l~~~~~~ 78 (505)
.++++++.|+. .+.++.... ..-..++.|||||++|++..+.. ...++|++|+++++ .+.++.....
T Consensus 37 ~~~~~~~~t~~--~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~ 113 (470)
T d2bgra1 37 NILVFNAEYGN--SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNN 113 (470)
T ss_dssp CEEEEETTTCC--EEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTT
T ss_pred cEEEEECCCCC--EEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCcc
Confidence 48999998863 445554321 11234778999999999986532 25689999999996 7777766655
Q ss_pred eeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 79 VDT-AASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 79 ~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
... .|||||++|+|..+. .||+.++.+
T Consensus 114 ~~~~~~SPDG~~ia~~~~~------~l~~~~~~~ 141 (470)
T d2bgra1 114 TQWVTWSPVGHKLAYVWNN------DIYVKIEPN 141 (470)
T ss_dssp EEEEEECSSTTCEEEEETT------EEEEESSTT
T ss_pred ccccccccCcceeeEeecc------cceEEECCC
Confidence 443 499999999998643 688888776
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=6.7e-07 Score=80.41 Aligned_cols=92 Identities=14% Similarity=0.032 Sum_probs=56.2
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
++.| ||++||++++... |. .|+. .++.|+.+|.+|.|.+..- .....|+.+++ .+. .
T Consensus 24 ~~~P-l~l~Hg~~gs~~~--~~----~l~~~L~~~v~~~d~~g~~~~~~~----------~~~a~~~~~~~---~~~--~ 81 (286)
T d1xkta_ 24 SERP-LFLVHPIEGSTTV--FH----SLASRLSIPTYGLQCTRAAPLDSI----------HSLAAYYIDCI---RQV--Q 81 (286)
T ss_dssp CSCC-EEEECCTTCCCGG--GH----HHHHTCSSCEEEECCCTTSCCSCH----------HHHHHHHHHHH---HHH--C
T ss_pred CCCe-EEEECCCCccHHH--HH----HHHHHcCCeEEEEeCCCCCCCCCH----------HHHHHHHHHHH---HHh--c
Confidence 3445 7799999876432 33 3444 2789999999987654211 01123333333 222 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 374 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~ 374 (505)
..+++.++|||+||.+++.++.++|++...++...
T Consensus 82 ~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 82 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred CCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 23688999999999999999999998877655443
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.99 E-value=2.2e-05 Score=69.80 Aligned_cols=99 Identities=15% Similarity=0.099 Sum_probs=58.9
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCT 340 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d 340 (505)
..|.++++||.........|......|.. .+.|+.++.+|.+.. .....+++++.+.+ +.+.+.. .
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~~-~~~V~al~~pG~~~~----------e~~~~s~~~~a~~~~~~i~~~~--~ 107 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEG----------EPLPSSMAAVAAVQADAVIRTQ--G 107 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHTT-TCCEEEECCTTSSTT----------CCEESSHHHHHHHHHHHHHHTT--S
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCC-CceEEEEeCCCcCCC----------CCCCCCHHHHHHHHHHHHHHhC--C
Confidence 46889999974322222335444444433 589999999987532 11123455555543 3444431 2
Q ss_pred CCcEEEEeeChHHHHHHHHHhhC---CCceeEEEec
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMR---PDLFKAAVAA 373 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~---p~~~~a~v~~ 373 (505)
...+.++|||+||.++..++.+. ......++..
T Consensus 108 ~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvll 143 (255)
T d1mo2a_ 108 DKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLI 143 (255)
T ss_dssp SSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred CCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEE
Confidence 35689999999999998887653 3334544443
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.99 E-value=2.6e-05 Score=69.32 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=59.9
Q ss_pred CCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc
Q 010654 260 DGSDPLLLYGYGSYEICND-PAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
..+.| ||++||-.++... ..+......+.++ |+.|+.+++....... .... . ...+.+..+.+...+++
T Consensus 3 ~~P~P-VVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~---~~~~--~--~~~~~~~~e~v~~~I~~ 74 (279)
T d1ei9a_ 3 PAPLP-LVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLRED---VENS--F--FLNVNSQVTTVCQILAK 74 (279)
T ss_dssp TSSCC-EEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHH---HHHH--H--HSCHHHHHHHHHHHHHS
T ss_pred CCCCc-EEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccc---cccc--h--hhhHHHHHHHHHHHHHh
Confidence 34556 6678996554333 2344444555555 9999999874322111 1000 0 12234444444333332
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHhhCCC-ceeEEEec
Q 010654 337 CYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAA 373 (505)
Q Consensus 337 ~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~ 373 (505)
-..-.++|-++|||+||.++-+++.+.++ .+...|+.
T Consensus 75 ~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITL 112 (279)
T d1ei9a_ 75 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISV 112 (279)
T ss_dssp CGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEE
T ss_pred ccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEE
Confidence 11123689999999999999999988775 35555544
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.98 E-value=5.2e-06 Score=75.84 Aligned_cols=110 Identities=8% Similarity=0.027 Sum_probs=68.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
...|+++++||..+.............+.+ ..+.|+++|++.... ..+..+... -...-+.+...+++|.+...+
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~--~~Y~~a~~n--~~~Vg~~ia~~i~~l~~~~g~ 143 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQ--TSYTQAANN--VRVVGAQVAQMLSMLSANYSY 143 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHS--SCHHHHHHH--HHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccC--cchHHHHHH--HHHHHHHHHHHHHHHHHhcCC
Confidence 457999999998665443322233344444 569999999964221 112111100 012235556677777776567
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
++++|-|+|||.||.++..++.+ ...+..++..-|
T Consensus 144 ~~~~vhlIGhSLGAhvAG~aG~~-~~~l~rItgLDP 178 (337)
T d1rp1a2 144 SPSQVQLIGHSLGAHVAGEAGSR-TPGLGRITGLDP 178 (337)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHT-STTCCEEEEESC
T ss_pred ChhheEEEeecHHHhhhHHHHHh-hccccceeccCC
Confidence 89999999999999999877664 445555554444
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.87 E-value=1.1e-05 Score=73.50 Aligned_cols=113 Identities=10% Similarity=0.019 Sum_probs=70.8
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
+...|+++++||..+.............+.+ ..+.|+++|+...... .+..+.... ...-+.+...+++|.....
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~--~Y~~a~~n~--~~Vg~~ia~~i~~l~~~~g 142 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRT--EYTQASYNT--RVVGAEIAFLVQVLSTEMG 142 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSS--CHHHHHHHH--HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhccc--chHHHHHhH--HHHHHHHHHHHHHHHHhcC
Confidence 3567999999997655444323333344444 5799999999643221 122111110 1122334456666666555
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+++++|-++|||.|+.++..+..+-+.++..+...-|.
T Consensus 143 ~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA 180 (338)
T d1bu8a2 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA 180 (338)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred CCcceeEEEeccHHHHHHHHHHHhhccccccccccccC
Confidence 78999999999999999999987766656666555443
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.65 E-value=0.005 Score=55.55 Aligned_cols=191 Identities=9% Similarity=-0.044 Sum_probs=101.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
...|.+|++.+........+... ..-...+.|+|||++|+......+ ..+.+.++++++....+....+... ..|+|
T Consensus 79 dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~v~~s~d~~~l~~~~~~~~-~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~ 156 (311)
T d1nr0a1 79 HGNVRIWDTTQTTHILKTTIPVF-SGPVKDISWDSESKRIAAVGEGRE-RFGHVFLFDTGTSNGNLTGQARAMNSVDFKP 156 (311)
T ss_dssp TSEEEEEESSSTTCCEEEEEECS-SSCEEEEEECTTSCEEEEEECCSS-CSEEEEETTTCCBCBCCCCCSSCEEEEEECS
T ss_pred CceEeeeeeeccccccccccccc-cCcccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 34688999977543223333322 223446789999999876654332 2345566666652344443333332 34899
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
+|+.+++....+ ..+.++|+.+ +.....+... ...+..+.|+++. ++++...++ .+.+|++.. +.....+
T Consensus 157 ~~~~~l~sgs~d----~~i~i~d~~~-~~~~~~~~~~-~~~i~~v~~~p~~~~l~~~~~d~--~v~~~d~~~-~~~~~~~ 227 (311)
T d1nr0a1 157 SRPFRIISGSDD----NTVAIFEGPP-FKFKSTFGEH-TKFVHSVRYNPDGSLFASTGGDG--TIVLYNGVD-GTKTGVF 227 (311)
T ss_dssp SSSCEEEEEETT----SCEEEEETTT-BEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--CEEEEETTT-CCEEEEC
T ss_pred cceeeecccccc----cccccccccc-cccccccccc-cccccccccCccccccccccccc--ccccccccc-ccccccc
Confidence 998766655442 3677888875 3322234333 3357788998863 444455554 366788753 2211111
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.. ...........+..+.++++++.+ ++.+.. ..+.+.+..+++
T Consensus 228 ~~-~~~~~~~h~~~V~~~~~s~~~~~l-~tgs~D---g~v~iwd~~t~~ 271 (311)
T d1nr0a1 228 ED-DSLKNVAHSGSVFGLTWSPDGTKI-ASASAD---KTIKIWNVATLK 271 (311)
T ss_dssp BC-TTSSSCSSSSCEEEEEECTTSSEE-EEEETT---SEEEEEETTTTE
T ss_pred cc-cccccccccccccccccCCCCCEE-EEEeCC---CeEEEEECCCCc
Confidence 10 000110101112234566777744 444432 357788887776
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=97.41 E-value=0.0029 Score=60.26 Aligned_cols=93 Identities=10% Similarity=0.010 Sum_probs=57.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeecc--ccceeE--
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPR--VVGVDT-- 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~--~~~~~~-- 81 (505)
.+|.+||..|.+ ....+.. .....+.++||||+++++... ...+.++|+++++ ....+... ..+...
T Consensus 42 g~v~v~D~~t~~--v~~~~~~--g~~~~~v~fSpDG~~l~~~s~---dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~ 114 (432)
T d1qksa2 42 GQIALIDGSTYE--IKTVLDT--GYAVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSK 114 (432)
T ss_dssp TEEEEEETTTCC--EEEEEEC--SSCEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEECCSEEEEEEECC
T ss_pred CEEEEEECCCCc--EEEEEeC--CCCeeEEEECCCCCEEEEEcC---CCCEEEEEeeCCCceEEEEEecCCCCCCeEEec
Confidence 368899988763 3333332 223447789999999876432 2468889998875 11222211 112222
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.|||||++|+.....+ ..+.++|.++
T Consensus 115 ~~SpDG~~l~vs~~~~----~~v~i~d~~t 140 (432)
T d1qksa2 115 MEGWEDKYAIAGAYWP----PQYVIMDGET 140 (432)
T ss_dssp STTCTTTEEEEEEEET----TEEEEEETTT
T ss_pred ccCCCCCEEEEEcCCC----CeEEEEeCcc
Confidence 2789999998876542 3677888776
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.00056 Score=62.13 Aligned_cols=141 Identities=7% Similarity=0.114 Sum_probs=69.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc---eeEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~---~~~~~s 84 (505)
.+|.+|++.+. ....++-....+....++++||||++|++.......-.+|.++..+.. .+.......+ ....||
T Consensus 14 ~~I~v~~~~~~-~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~-~~~~~~~~~~~~p~~l~~s 91 (333)
T d1ri6a_ 14 QQIHVWNLNHE-GALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAESALPGSLTHISTD 91 (333)
T ss_dssp TEEEEEEECTT-SCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEEEECSSCCSEEEEC
T ss_pred CcEEEEEEcCC-CCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCc-EEEeeecccCCCceEEEEc
Confidence 56888888543 222222111112223367899999999766544444455666555543 4443322212 124599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
|||++|+.....+ ..+..++.+. ..... ....... .+..+.+++|...+.........+.+++...
T Consensus 92 pDg~~l~v~~~~~----~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~ 159 (333)
T d1ri6a_ 92 HQGQFVFVGSYNA----GNVSVTRLED-GLPVGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSD 159 (333)
T ss_dssp TTSSEEEEEETTT----TEEEEEEEET-TEEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCEEeecccCC----Cceeeecccc-ccceecccccCCCc-cceEEEeeecceeeeccccccceeeEEEecc
Confidence 9999988776432 2444444433 11111 1111111 2345556665333332222334566676653
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=97.32 E-value=0.023 Score=49.79 Aligned_cols=179 Identities=8% Similarity=0.001 Sum_probs=97.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
..+.++++.+. +....+.. ........++|||+++++.... ...+++.+..++. ........... ...++||
T Consensus 96 ~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~dg~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (301)
T d1l0qa2 96 STLSVIDTTSN--TVAGTVKT--GKSPLGLALSPDGKKLYVTNNG--DKTVSVINTVTKA-VINTVSVGRSPKGIAVTPD 168 (301)
T ss_dssp TEEEEEETTTT--EEEEEEEC--SSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTE-EEEEEECCSSEEEEEECTT
T ss_pred ceeeecccccc--eeeeeccc--cccceEEEeecCCCeeeeeecc--ccceeeeeccccc-eeeecccCCCceEEEeecc
Confidence 45667776553 12222222 2233456799999998776543 3457778887775 33322222222 2348999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
++.+++..... ..+...+... ......+... ..+..+.++.+ .+++.........+.++++.+ ++...
T Consensus 169 ~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t-~~~~~-- 238 (301)
T d1l0qa2 169 GTKVYVANFDS----MSISVIDTVT-NSVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT-NKITA-- 238 (301)
T ss_dssp SSEEEEEETTT----TEEEEEETTT-TEEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT-TEEEE--
T ss_pred ccceeeecccc----cccccccccc-eeeeeccccc--CCcceeeccccccccccccccceeeeeeeeecCC-CeEEE--
Confidence 99988776542 2455555543 2222123222 22445555554 566555555556788898763 22111
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+..... ..++.+++|++.++++.+.. ..|.++|+++++
T Consensus 239 ----~~~~~~~---~~~va~spdg~~l~va~~~~---~~i~v~D~~t~~ 277 (301)
T d1l0qa2 239 ----RIPVGPD---PAGIAVTPDGKKVYVALSFC---NTVSVIDTATNT 277 (301)
T ss_dssp ----EEECCSS---EEEEEECTTSSEEEEEETTT---TEEEEEETTTTE
T ss_pred ----EEcCCCC---EEEEEEeCCCCEEEEEECCC---CeEEEEECCCCe
Confidence 1121111 12245688998776655432 478889988886
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=97.32 E-value=0.0091 Score=52.63 Aligned_cols=133 Identities=13% Similarity=0.128 Sum_probs=76.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
..|.+||+.|++ .+..+... ..-.++++||||++|++... ....|.++|+++++..+.+..........+++||
T Consensus 12 ~~v~v~D~~t~~--~~~~i~~g--~~p~~va~spdG~~l~v~~~--~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~ 85 (301)
T d1l0qa2 12 DNISVIDVTSNK--VTATIPVG--SNPMGAVISPDGTKVYVANA--HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 85 (301)
T ss_dssp TEEEEEETTTTE--EEEEEECS--SSEEEEEECTTSSEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred CEEEEEECCCCe--EEEEEECC--CCceEEEEeCCCCEEEEEEC--CCCEEEEEECCCCceeeeeecccccccccccccc
Confidence 458899997752 22223221 12346789999999876543 2457999999988623333322222234489999
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
+.+++....+ ..+.+.+..+ +.....+..... ...+.++++ .+++....+ ..+.+++..
T Consensus 86 ~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~dg~~~~~~~~~~--~~~~~~~~~ 146 (301)
T d1l0qa2 86 KQVYVTNMAS----STLSVIDTTS-NTVAGTVKTGKS--PLGLALSPDGKKLYVTNNGD--KTVSVINTV 146 (301)
T ss_dssp SEEEEEETTT----TEEEEEETTT-TEEEEEEECSSS--EEEEEECTTSSEEEEEETTT--TEEEEEETT
T ss_pred cccccccccc----ceeeeccccc-ceeeeecccccc--ceEEEeecCCCeeeeeeccc--cceeeeecc
Confidence 9988876542 3677778765 333324443322 345566665 344444333 235566654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.29 E-value=0.014 Score=53.55 Aligned_cols=75 Identities=12% Similarity=0.040 Sum_probs=50.6
Q ss_pred EEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCC-----CCCceEEEee
Q 010654 36 GLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDE-----LFNSELLACP 108 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~ 108 (505)
..++||||+++++..... ...+||++|.++++.+..+.... .....|||||++|++...... .....+.++|
T Consensus 25 ~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~-~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D 103 (373)
T d2madh_ 25 DEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF-LPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred ccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCC-CccEEEcCCCCEEEEEeecCCcccccccceEEEEEE
Confidence 456899999997764333 35689999999987333333222 223459999999999876421 1234678888
Q ss_pred CCC
Q 010654 109 VDN 111 (505)
Q Consensus 109 ~~~ 111 (505)
+.+
T Consensus 104 ~~t 106 (373)
T d2madh_ 104 PVT 106 (373)
T ss_pred CCC
Confidence 876
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.12 E-value=0.01 Score=53.33 Aligned_cols=155 Identities=12% Similarity=0.017 Sum_probs=86.7
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
++.+|||+.|++... +.+++.|++++...+.++.+.+.+. ..|||||+.|+.-+.+ ..+.+.++.+....
T Consensus 23 ~a~~~~g~~l~~~~~----~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~d-----g~i~iwd~~~~~~~ 93 (311)
T d1nr0a1 23 LGNTPAGDKIQYCNG----TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH-----GNVRIWDTTQTTHI 93 (311)
T ss_dssp CEECTTSSEEEEEET----TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEESSSTTCC
T ss_pred EEEcCCCCEEEEEeC----CEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccC-----ceEeeeeeeccccc
Confidence 468999999988643 3488999988763445554443433 3499999987655433 36777887652222
Q ss_pred e-EEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEE
Q 010654 116 T-VLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 193 (505)
Q Consensus 116 ~-~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (505)
. ..+... ...+..+.|+++. .+++...+......+++++. +.....+. .....+..+.++++++.+++
T Consensus 94 ~~~~~~~~-~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~-~~~~~~l~--------~h~~~v~~v~~~~~~~~~l~ 163 (311)
T d1nr0a1 94 LKTTIPVF-SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNLT--------GQARAMNSVDFKPSRPFRII 163 (311)
T ss_dssp EEEEEECS-SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCCC--------CCSSCEEEEEECSSSSCEEE
T ss_pred cccccccc-cCcccccccccccccccccccccccccccccccc-cccccccc--------ccccccccccccccceeeec
Confidence 1 123322 3357889999874 34444433333356677664 22222221 11011222345667775555
Q ss_pred EEecCCCCceEEEEECCCCc
Q 010654 194 HYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.+.. ..+.+++..+++
T Consensus 164 sgs~d---~~i~i~d~~~~~ 180 (311)
T d1nr0a1 164 SGSDD---NTVAIFEGPPFK 180 (311)
T ss_dssp EEETT---SCEEEEETTTBE
T ss_pred ccccc---cccccccccccc
Confidence 54432 346677776654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.99 E-value=0.019 Score=54.11 Aligned_cols=93 Identities=8% Similarity=-0.011 Sum_probs=56.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee---eecc--ccceeE
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPR--VVGVDT 81 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---l~~~--~~~~~~ 81 (505)
..+|.+||+.|++ ....+... ..-.++++||||++|+.... ...+.++|+++++ ... +... ..+...
T Consensus 41 dg~v~vwD~~t~~--~~~~l~~g--~~~~~vafSPDGk~l~~~~~---d~~v~vwd~~t~~-~~~~~~i~~~~~~~~~~~ 112 (426)
T d1hzua2 41 AGQIALVDGDSKK--IVKVIDTG--YAVHISRMSASGRYLLVIGR---DARIDMIDLWAKE-PTKVAEIKIGIEARSVES 112 (426)
T ss_dssp TTEEEEEETTTCS--EEEEEECC--SSEEEEEECTTSCEEEEEET---TSEEEEEETTSSS-CEEEEEEECCSEEEEEEE
T ss_pred CCEEEEEECCCCc--EEEEEeCC--CCeeEEEECCCCCEEEEEeC---CCCEEEEEccCCc-eeEEEEEeCCCCCcceEE
Confidence 3578999998863 33334322 22346789999999865432 2468899999886 222 2111 112222
Q ss_pred --EeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 82 --AASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 82 --~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.|||||++++.....+ ..+.++|.+.
T Consensus 113 s~~~spDG~~l~v~~~~~----~~v~i~d~~~ 140 (426)
T d1hzua2 113 SKFKGYEDRYTIAGAYWP----PQFAIMDGET 140 (426)
T ss_dssp CCSTTCTTTEEEEEEEES----SEEEEEETTT
T ss_pred eeeecCCCCEEEEeecCC----CeEEEEcCCc
Confidence 2889999988776432 2566667655
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=96.97 E-value=0.059 Score=47.88 Aligned_cols=97 Identities=8% Similarity=0.038 Sum_probs=50.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee---ccccce-eEEe
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT---PRVVGV-DTAA 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~---~~~~~~-~~~~ 83 (505)
..|..|++.+.....+.+........-..+.|||||++|++..... ..+..++.+... ..... ...... ...+
T Consensus 59 ~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~--~~v~~~~~~~~~-~~~~~~~~~~~~~~~~v~~ 135 (333)
T d1ri6a_ 59 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLEDGL-PVGVVDVVEGLDGCHSANI 135 (333)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEETTE-EEEEEEEECCCTTBCCCEE
T ss_pred CeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCC--Cceeeecccccc-ceecccccCCCccceEEEe
Confidence 4577777765433333333322222223578999999987764433 234444444332 22111 111111 2348
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+||++.++...... ..+..++...
T Consensus 136 s~d~~~~~~~~~~~----~~i~~~~~~~ 159 (333)
T d1ri6a_ 136 SPDNRTLWVPALKQ----DRICLFTVSD 159 (333)
T ss_dssp CTTSSEEEEEEGGG----TEEEEEEECT
T ss_pred eecceeeecccccc----ceeeEEEecc
Confidence 99999888776542 2565666543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.97 E-value=0.14 Score=47.99 Aligned_cols=135 Identities=15% Similarity=0.129 Sum_probs=78.0
Q ss_pred CCCeEEEEe----cCCceEE-EEEEeCCCcEEEEEecc--ccceEEEEEeCCCCCceeeee-ccccceeEEeeeeCCEEE
Q 010654 20 SNDICLYHE----KDDIYSL-GLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLT-PRVVGVDTAASHRGNHFF 91 (505)
Q Consensus 20 ~~~~~~~~~----~~~~~~~-~~~~SpDg~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~s~dg~~l~ 91 (505)
.+.+.++.. .+..+.+ +..+||||++++++... .+...|++.|+++++ ..... +........|++|++.|+
T Consensus 108 ~~~evllD~n~la~~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~-~~~~~i~~~~~~~~~W~~D~~~~~ 186 (430)
T d1qfma1 108 GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-ELPDVLERVKFSCMAWTHDGKGMF 186 (430)
T ss_dssp SCCEEEECGGGGCSSSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-EEEEEEEEECSCCEEECTTSSEEE
T ss_pred CCeeeecchhhhcccccceecceEecCCCCEEEEEeccccCchheeEEeccCcce-ecccccccccccceEEcCCCCEEE
Confidence 345566642 1234443 67899999999999654 357899999999996 32211 111122345999999999
Q ss_pred EEEcCCC-----------CCCceEEEeeCCCCCCceEEEcCCCC--ceeeEEEEeCC--EEEEEEecC--CeeEEEEEEc
Q 010654 92 ITRRSDE-----------LFNSELLACPVDNTSETTVLIPHRES--VKLQDIQLFID--HLAVYEREG--GLQKITTYRL 154 (505)
Q Consensus 92 ~~~~~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~d--~l~~~~~~~--~~~~l~~~~~ 154 (505)
|...... .-..++++..+.+......++-+..+ ..+..+..+.+ .+++....+ ....+++.++
T Consensus 187 Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~ 266 (430)
T d1qfma1 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL 266 (430)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG
T ss_pred EEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeC
Confidence 9875321 11247888888653233333333222 23344555555 444444433 2345666665
Q ss_pred C
Q 010654 155 P 155 (505)
Q Consensus 155 ~ 155 (505)
.
T Consensus 267 ~ 267 (430)
T d1qfma1 267 Q 267 (430)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.72 E-value=0.007 Score=54.36 Aligned_cols=124 Identities=11% Similarity=0.058 Sum_probs=72.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc------
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG------ 78 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~------ 78 (505)
+..+|.+||+.+. +....+...+ ......+++||||+++++... ....|+++|+++++....+......
T Consensus 9 ~d~~v~v~D~~s~--~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~--~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~ 84 (337)
T d1pbyb_ 9 RPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp TTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred CCCEEEEEECCCC--eEEEEEECCCCCCCccEEEECCCCCEEEEEEC--CCCeEEEEECCCCcEEEEEecCCCcccccce
Confidence 5678999999774 2222232222 222346789999999876533 2357999999998722333221111
Q ss_pred eeEEeeeeCCEEEEEEcCCC-------CCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE
Q 010654 79 VDTAASHRGNHFFITRRSDE-------LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH 136 (505)
Q Consensus 79 ~~~~~s~dg~~l~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~ 136 (505)
....++|||+.++...+... .....+.++|... +.....+.... .+..+.+++|+
T Consensus 85 ~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~--~~~~~~~s~dg 146 (337)
T d1pbyb_ 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRKAFEAPR--QITMLAWARDG 146 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEEEEECCS--SCCCEEECTTS
T ss_pred eeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccC-CeEEEeccccC--CceEEEEcCCC
Confidence 12349999999988875420 1224677788765 33333333322 24566777764
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.67 E-value=0.0056 Score=55.77 Aligned_cols=116 Identities=8% Similarity=-0.012 Sum_probs=65.9
Q ss_pred EEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC-----CCCCceEEEeeCC
Q 010654 38 QASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD-----ELFNSELLACPVD 110 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~~~l~~~~~~ 110 (505)
+.||||+++++..... ..+.+|++|+++++.+..+.... .....|||||++||+.+... +.....|.++|++
T Consensus 8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~-~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~ 86 (355)
T d2bbkh_ 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 86 (355)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS-SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCC-CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECC
Confidence 4689999997764332 46789999999986223332222 12345999999999876531 1122478889987
Q ss_pred CCCCceEEE--cCCCCc----eeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 111 NTSETTVLI--PHRESV----KLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 111 ~~~~~~~~~--~~~~~~----~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
+ ++....+ ...... ....+.+++++ .+++.+......+.+++..
T Consensus 87 t-~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~ 137 (355)
T d2bbkh_ 87 T-LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 137 (355)
T ss_dssp T-CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred C-CCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecC
Confidence 6 3332222 111110 11245666653 2333343333456677765
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.66 E-value=0.026 Score=49.69 Aligned_cols=137 Identities=14% Similarity=0.133 Sum_probs=77.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCce---eeeecccccee-EE
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL---RVLTPRVVGVD-TA 82 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~---~~l~~~~~~~~-~~ 82 (505)
...+.+|++.+.. ...+.............|+|||++|+.... ...++++|+.++... ..+........ ..
T Consensus 157 dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 231 (299)
T d1nr0a2 157 DSKVHVYKLSGAS--VSEVKTIVHPAEITSVAFSNNGAFLVATDQ---SRKVIPYSVANNFELAHTNSWTFHTAKVACVS 231 (299)
T ss_dssp TSEEEEEEEETTE--EEEEEEEECSSCEEEEEECTTSSEEEEEET---TSCEEEEEGGGTTEESCCCCCCCCSSCEEEEE
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 3467888886542 222222222334456789999999876543 235888888776511 12222222222 34
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc-CCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|+|+|+.|+.-+.+ ..+++.++........... ......+..+.|.++..+++...++ .+.+|+++
T Consensus 232 ~s~~~~~l~sgs~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~--~i~iWdl~ 298 (299)
T d1nr0a2 232 WSPDNVRLATGSLD-----NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDS--NIKFWNVP 298 (299)
T ss_dssp ECTTSSEEEEEETT-----SCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTS--CEEEEECC
T ss_pred ccccccceEEEcCC-----CEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCCC--EEEEEecc
Confidence 99999988766543 3678888876333332222 2223345666666665666666665 36677764
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.64 E-value=0.19 Score=44.79 Aligned_cols=178 Identities=12% Similarity=0.069 Sum_probs=93.2
Q ss_pred eEEEEECCCCCCC-CeEEEEe-cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee---eeccccce-eEE
Q 010654 9 KAWLHKLEADQSN-DICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPRVVGV-DTA 82 (505)
Q Consensus 9 ~l~~~~lgt~~~~-~~~~~~~-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---l~~~~~~~-~~~ 82 (505)
.|.+||+.++... ....... .........+|||||++|+.... ...|.+.|+.... .+. +....... ...
T Consensus 73 ~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~---dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~ 148 (337)
T d1gxra_ 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLSIWDLAAPT-PRIKAELTSSAPACYALA 148 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEEEEECCCC---EEEEEEECSSSCEEEEE
T ss_pred EEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeec---ccccccccccccc-cccccccccccccccccc
Confidence 4788999765332 2222222 12334567899999999765433 2457777877654 222 22222222 234
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
|+|++..++..+.. ..+..+++.+ +......... ...+..+++..+ ..++....++ .+.+|++.. +..+
T Consensus 149 ~~~~~~~l~s~~~d-----~~i~~~~~~~-~~~~~~~~~~-~~~v~~l~~s~~~~~~~~~~~d~--~v~i~d~~~-~~~~ 218 (337)
T d1gxra_ 149 ISPDSKVCFSCCSD-----GNIAVWDLHN-QTLVRQFQGH-TDGASCIDISNDGTKLWTGGLDN--TVRSWDLRE-GRQL 218 (337)
T ss_dssp ECTTSSEEEEEETT-----SCEEEEETTT-TEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--EEEEEETTT-TEEE
T ss_pred cccccccccccccc-----cccccccccc-cccccccccc-ccccccccccccccccccccccc--ccccccccc-ceee
Confidence 89999877755533 3677888765 3322222222 234677888776 3444445554 467788753 2211
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. ....+.. +..+.+++++..++ +.+. -..+...+..+++
T Consensus 219 ~------~~~~~~~---i~~l~~~~~~~~l~-~~~~---d~~i~i~d~~~~~ 257 (337)
T d1gxra_ 219 Q------QHDFTSQ---IFSLGYCPTGEWLA-VGME---SSNVEVLHVNKPD 257 (337)
T ss_dssp E------EEECSSC---EEEEEECTTSSEEE-EEET---TSCEEEEETTSSC
T ss_pred c------ccccccc---eEEEEEcccccccc-eecc---ccccccccccccc
Confidence 1 1122222 22233456666554 3332 2456777776655
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=96.63 E-value=0.012 Score=55.89 Aligned_cols=138 Identities=12% Similarity=0.053 Sum_probs=77.3
Q ss_pred CCceEEEEECCCCCCCCeEEEE---ecC-CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-----
Q 010654 6 RPDKAWLHKLEADQSNDICLYH---EKD-DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV----- 76 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~---~~~-~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~----- 76 (505)
|...+.+||+.|... ..+.+ ... ..+..++.+||||++|+++... ...+.++|.++++ +.......
T Consensus 81 ~dg~v~~~d~~t~~~--~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~--~~~v~i~d~~t~~-~~~~~~~~~~~~~ 155 (432)
T d1qksa2 81 RDGKVNMIDLWMKEP--TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLE-PKKIQSTRGMTYD 155 (432)
T ss_dssp TTSEEEEEETTSSSC--CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCC-EEEEEECCEECTT
T ss_pred CCCCEEEEEeeCCCc--eEEEEEecCCCCCCeEEecccCCCCCEEEEEcCC--CCeEEEEeCcccc-ceeeeccCCcccc
Confidence 445789999977532 22222 111 1233456789999998765432 4568889999886 43322110
Q ss_pred ------cce--eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCce-EEEcCCCCceeeEEEEeCCEE-EEEEecCCe
Q 010654 77 ------VGV--DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT-VLIPHRESVKLQDIQLFIDHL-AVYEREGGL 146 (505)
Q Consensus 77 ------~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~d~l-~~~~~~~~~ 146 (505)
.+. ...+||||+.+++..... ..+..++..+..... +.+... ..+.++.+++|+. ++++..+ .
T Consensus 156 ~~~~~~~~~~~~v~~s~dg~~~~vs~~~~----~~i~~~d~~~~~~~~~~~i~~g--~~~~~~~~spdg~~~~va~~~-~ 228 (432)
T d1qksa2 156 EQEYHPEPRVAAILASHYRPEFIVNVKET----GKILLVDYTDLNNLKTTEISAE--RFLHDGGLDGSHRYFITAANA-R 228 (432)
T ss_dssp TCCEESCCCEEEEEECSSSSEEEEEETTT----TEEEEEETTCSSEEEEEEEECC--SSEEEEEECTTSCEEEEEEGG-G
T ss_pred ceeccCCCceeEEEECCCCCEEEEEEccC----CeEEEEEccCCCcceEEEEccc--CccccceECCCCCEEEEeccc-c
Confidence 011 123788888877766432 478888876522111 233322 2356788888743 3333333 3
Q ss_pred eEEEEEEcC
Q 010654 147 QKITTYRLP 155 (505)
Q Consensus 147 ~~l~~~~~~ 155 (505)
..+.+++..
T Consensus 229 ~~v~v~d~~ 237 (432)
T d1qksa2 229 NKLVVIDTK 237 (432)
T ss_dssp TEEEEEETT
T ss_pred ceEEEeecc
Confidence 456667765
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.61 E-value=0.042 Score=49.57 Aligned_cols=96 Identities=13% Similarity=0.042 Sum_probs=59.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-------cceEEEEEeCCCCCceee-eeccc--
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-------ITRFVFYLDVSKPEELRV-LTPRV-- 76 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-------~~~~l~~~d~~~~~~~~~-l~~~~-- 76 (505)
...+|++|+.+++ ....... .+...++|||||++|++..... ....|+++|+++++ ... +....
T Consensus 27 ~~~v~v~D~~tg~--~~~~~~~---g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~-~~~~~~~~~~~ 100 (355)
T d2bbkh_ 27 VTQQFVIDGEAGR--VIGMIDG---GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-PTADIELPDAP 100 (355)
T ss_dssp SEEEEEEETTTTE--EEEEEEE---CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-EEEEEEETTCC
T ss_pred cCeEEEEECCCCc--EEEEEEC---CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCC-EEEEEecCCcc
Confidence 3469999998762 2222221 1222578999999988765321 24579999999987 332 21110
Q ss_pred ------cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 77 ------VGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 77 ------~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
......|+|||+++++.+... ...++..+..+
T Consensus 101 ~~~~~~~~~~~~~s~dg~~~~v~~~~~---~~~~~~~~~~~ 138 (355)
T d2bbkh_ 101 RFLVGTYPWMTSLTPDGKTLLFYQFSP---APAVGVVDLEG 138 (355)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECSS---SCEEEEEETTT
T ss_pred eeecCCCCceEEEecCCCeeEEecCCC---CceeeeeecCC
Confidence 001235999999998876542 24677778765
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.60 E-value=0.082 Score=48.24 Aligned_cols=136 Identities=6% Similarity=-0.031 Sum_probs=73.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeee---ecccccee-EE
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL---TPRVVGVD-TA 82 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l---~~~~~~~~-~~ 82 (505)
...|.+|++.++.......+.+.. .-...++|||||++|+.... ...+++.|+.++. .+.. ........ ..
T Consensus 28 ~~~i~iw~~~~~~~~~~~~l~gH~-~~V~~l~fsp~~~~l~s~s~---D~~i~vWd~~~~~-~~~~~~~~~~~~~v~~i~ 102 (371)
T d1k8kc_ 28 NHEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGT---DRNAYVWTLKGRT-WKPTLVILRINRAARCVR 102 (371)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEET---TSCEEEEEEETTE-EEEEEECCCCSSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCC-CCEEEEEECCCCCEEEEEEC---CCeEEEEeecccc-cccccccccccccccccc
Confidence 346888888654222333344322 23447789999998764432 2346666766654 3322 12222222 34
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+|+++.|+..+.. + .-+++.++... ..+ .........+..+.|.++. .+++...++. +.+|++.
T Consensus 103 ~~p~~~~l~~~s~d-~--~i~i~~~~~~~---~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~--v~v~~~~ 171 (371)
T d1k8kc_ 103 WAPNEKKFAVGSGS-R--VISICYFEQEN---DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK--CRIFSAY 171 (371)
T ss_dssp ECTTSSEEEEEETT-S--SEEEEEEETTT---TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC--EEEEECC
T ss_pred cccccccceeeccc-C--cceeeeeeccc---ccccccccccccccccccccccccccceeccccCcE--EEEEeec
Confidence 99999988877643 2 23555555332 222 1222223356788898874 4444555654 5667754
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=96.33 E-value=0.052 Score=49.42 Aligned_cols=95 Identities=11% Similarity=-0.052 Sum_probs=56.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-------cceEEEEEeCCCCCceeeeeccccc--
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-------ITRFVFYLDVSKPEELRVLTPRVVG-- 78 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-------~~~~l~~~d~~~~~~~~~l~~~~~~-- 78 (505)
.+||.+|..|+. ....+. ..+...+.|||||++|++..... ....|.++|+.+++ ..........
T Consensus 47 ~~v~v~D~~tg~--~~~~~~---~~~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~-~~~~~~~~~~~~ 120 (373)
T d2madh_ 47 IQQWVLDAGSGS--ILGHVN---GGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-PIADIELPDAPR 120 (373)
T ss_pred ceEEEEECCCCC--EEEEEe---CCCCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCc-EEEEEecCCcce
Confidence 469999987752 222222 22334688999999998875432 24679999999987 3322211111
Q ss_pred -------eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 79 -------VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 79 -------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
....|++||+.+++...... ..+...+...
T Consensus 121 ~~~~~~~~~~~~s~dg~~~~v~~~~~~---~~~~~~~~~~ 157 (373)
T d2madh_ 121 FDVGPYSWMNANTPNNADLLFFQFAAG---PAVGLVVQGG 157 (373)
T ss_pred eEeccCCCcEEEEeCCCcEEEEEEcCC---CceEEeeccC
Confidence 11248999998887764321 2444455443
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.27 E-value=0.025 Score=52.00 Aligned_cols=108 Identities=7% Similarity=-0.023 Sum_probs=63.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee---eecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..+|||||++|++... ...|.++|+++++ ..+ +..+...+. ..|+|+|+.|+-.+.+ ..+.+.++.+
T Consensus 12 ~~~~s~dg~~la~~~~---~~~i~iw~~~~~~-~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D-----~~i~vWd~~~ 82 (371)
T d1k8kc_ 12 CHAWNKDRTQIAICPN---NHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKG 82 (371)
T ss_dssp EEEECTTSSEEEEECS---SSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEET
T ss_pred EEEECCCCCEEEEEeC---CCEEEEEECCCCC-EEEEEEecCCCCCEEEEEECCCCCEEEEEECC-----CeEEEEeecc
Confidence 4689999999876533 3457888887775 333 333333332 3499999987755432 2566667654
Q ss_pred CCCceEEE-cCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEE
Q 010654 112 TSETTVLI-PHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYR 153 (505)
Q Consensus 112 ~~~~~~~~-~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~ 153 (505)
+.....+ .......+..+.|.++. .+++...++.-+++.++
T Consensus 83 -~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~ 125 (371)
T d1k8kc_ 83 -RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125 (371)
T ss_dssp -TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred -cccccccccccccccccccccccccccceeecccCcceeeeee
Confidence 2222122 22334457888998763 44555555554444443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=96.14 E-value=0.0094 Score=53.67 Aligned_cols=88 Identities=10% Similarity=0.061 Sum_probs=54.0
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cc-----
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VG----- 78 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~----- 78 (505)
.++.+|.+||+.|+ +....+.-+....-.++.|||||+++++.... ...|+++|+.+++....+.... ..
T Consensus 15 ~~~~~v~v~D~~t~--~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~--~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~ 90 (346)
T d1jmxb_ 15 NYPNNLHVVDVASD--TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNTFHANLSSVPGEVGRS 90 (346)
T ss_dssp ETTTEEEEEETTTT--EEEEEEECSSCCSSCEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred cCCCEEEEEECCCC--CEEEEEEcCCCCCcceEEECCCCCEEEEEECC--CCcEEEEeCccCeeeeeecccccccccCCc
Confidence 46778999999875 22222222222222367899999998765432 4679999999886222222111 11
Q ss_pred -eeEEeeeeCCEEEEEEcC
Q 010654 79 -VDTAASHRGNHFFITRRS 96 (505)
Q Consensus 79 -~~~~~s~dg~~l~~~~~~ 96 (505)
....+||||+++|+....
T Consensus 91 ~~~v~~s~DG~~l~v~~~~ 109 (346)
T d1jmxb_ 91 MYSFAISPDGKEVYATVNP 109 (346)
T ss_dssp SSCEEECTTSSEEEEEEEE
T ss_pred eEEEEEecCCCEEEEEecC
Confidence 113489999999888653
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.13 E-value=0.12 Score=47.14 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=40.8
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeee---ec-c-cccee-EEeeeeCCEEEEEEcCCCCCCceEEEee
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL---TP-R-VVGVD-TAASHRGNHFFITRRSDELFNSELLACP 108 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l---~~-~-~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 108 (505)
-++.+||||+++++.....+ .|++++.+........ .. . ..+.. ..++|||+.+|+....+ ..|.+++
T Consensus 148 h~v~~sPdG~~l~v~d~g~d--~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~----~~V~v~~ 221 (365)
T d1jofa_ 148 HGMVFDPTETYLYSADLTAN--KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG----NRICEYV 221 (365)
T ss_dssp EEEEECTTSSEEEEEETTTT--EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT----TEEEEEE
T ss_pred eEEEECCCCCEEEEeeCCCC--EEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCC----CEEEEEE
Confidence 36789999999887654333 4555543332212221 11 1 12222 34999999888877542 3677776
Q ss_pred CCC
Q 010654 109 VDN 111 (505)
Q Consensus 109 ~~~ 111 (505)
.+.
T Consensus 222 ~~~ 224 (365)
T d1jofa_ 222 IDP 224 (365)
T ss_dssp ECT
T ss_pred ecC
Confidence 654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.00 E-value=0.0078 Score=55.53 Aligned_cols=96 Identities=15% Similarity=0.057 Sum_probs=60.0
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc-------cceEEEEEeCCCCCceeeee-ccc--
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-------ITRFVFYLDVSKPEELRVLT-PRV-- 76 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~-------~~~~l~~~d~~~~~~~~~l~-~~~-- 76 (505)
..+||.+|..++ +.....+.. +...++|||||+.|++..... ....|+++|..+++....+. +..
T Consensus 45 ~~~~~~~d~~~~--~~~~~~~~~---~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~ 119 (368)
T d1mdah_ 45 TTENWVSCAGCG--VTLGHSLGA---FLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp SEEEEEEETTTT--EEEEEEEEC---TTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred cceEEEEeCCCC--cEEEEEeCC---CCCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccce
Confidence 356899998765 223333322 223678999999998876431 24569999999987222221 110
Q ss_pred --cc---eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 77 --VG---VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 77 --~~---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+ ....|||||+++++....+ ..+.++|+++
T Consensus 120 ~~~g~~p~~~a~SpDGk~l~va~~~~----~~v~~~d~~~ 155 (368)
T d1mdah_ 120 FSVGPRVHIIGNCASSACLLFFLFGS----SAAAGLSVPG 155 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSS----SCEEEEEETT
T ss_pred ecccCCccceEECCCCCEEEEEeCCC----CeEEEEECCC
Confidence 01 1234999999999876432 3788888876
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.00 E-value=0.28 Score=43.62 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=67.7
Q ss_pred EEEEEeCCCcEEEEEecc-ccceEEEEEeCCCCCceeeeecccc-c---eeEEeeeeCCEEEEEEcCC--CCCCceEEEe
Q 010654 35 LGLQASESKKFLFIASES-KITRFVFYLDVSKPEELRVLTPRVV-G---VDTAASHRGNHFFITRRSD--ELFNSELLAC 107 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~-~~~~~l~~~d~~~~~~~~~l~~~~~-~---~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~ 107 (505)
.++++++||+.++..... .....++.++.+++. +..+..... . ....+.++|+ ||+..... ......++++
T Consensus 85 ~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~nd~~~d~~G~-l~vtd~~~~~~~~~g~v~~~ 162 (319)
T d2dg1a1 85 AAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYV 162 (319)
T ss_dssp EEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEE
T ss_pred eEEEECCCCCEEEEecCCCccceeEEEEcCCCce-eeeeccCCCcccCCcceeEEeccc-eeecccccccccCcceeEEE
Confidence 467889999866544333 235678888888775 444432211 1 1234788885 77765432 1234679999
Q ss_pred eCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCC
Q 010654 108 PVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
+.++ +..+.+.. ... ...++.|++| .+|++-... .+++.|+++.++.
T Consensus 163 ~~dg-~~~~~~~~-~~~-~pnGia~s~dg~~lyvad~~~--~~I~~~d~~~~g~ 211 (319)
T d2dg1a1 163 SPDF-RTVTPIIQ-NIS-VANGIALSTDEKVLWVTETTA--NRLHRIALEDDGV 211 (319)
T ss_dssp CTTS-CCEEEEEE-EES-SEEEEEECTTSSEEEEEEGGG--TEEEEEEECTTSS
T ss_pred eccc-ceeEEEee-ccc-eeeeeeeccccceEEEecccC--CceEEEEEcCCCc
Confidence 8765 33231222 212 2457889876 455554433 4577888765443
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=95.96 E-value=0.5 Score=41.92 Aligned_cols=111 Identities=10% Similarity=0.075 Sum_probs=65.4
Q ss_pred EEEEeCCCcEEEEEecc----ccceEEEEEeCCCCCceeeeeccccc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 36 GLQASESKKFLFIASES----KITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~----~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
+..+.+||+ |++.... .....+|+++.+++. ++.+...... .-..|+|||++||+.... ..+|++++++
T Consensus 134 d~~~d~~G~-l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~~~~pnGia~s~dg~~lyvad~~----~~~I~~~d~~ 207 (319)
T d2dg1a1 134 DMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISVANGIALSTDEKVLWVTETT----ANRLHRIALE 207 (319)
T ss_dssp EEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESSEEEEEECTTSSEEEEEEGG----GTEEEEEEEC
T ss_pred ceeEEeccc-eeecccccccccCcceeEEEecccce-eEEEeeccceeeeeeeccccceEEEeccc----CCceEEEEEc
Confidence 567899998 4454322 135679999988775 6655433211 113599999999888653 2489999876
Q ss_pred CCCCceE------EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEc
Q 010654 111 NTSETTV------LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 111 ~~~~~~~------~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~ 154 (505)
..+.... ...........+++.+.++ |+++...++ ++.+++-
T Consensus 208 ~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g--~V~~~~p 256 (319)
T d2dg1a1 208 DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG--RVLVFNK 256 (319)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT--EEEEECT
T ss_pred CCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCC--EEEEECC
Confidence 4222111 1111222235678887764 555554443 4666763
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.93 E-value=0.48 Score=41.53 Aligned_cols=133 Identities=13% Similarity=0.040 Sum_probs=75.4
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc---e---
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---V--- 79 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~---~--- 79 (505)
...+|++++..++ ...++..+ .......+.+||+.++.. .+.|+++|.++++ .+.+.....+ .
T Consensus 38 ~~~~I~r~d~~~g---~~~~~~~~--~~~~~i~~~~dg~l~va~-----~~gl~~~d~~tg~-~~~l~~~~~~~~~~~~n 106 (295)
T d2ghsa1 38 LERELHELHLASG---RKTVHALP--FMGSALAKISDSKQLIAS-----DDGLFLRDTATGV-LTLHAELESDLPGNRSN 106 (295)
T ss_dssp GGTEEEEEETTTT---EEEEEECS--SCEEEEEEEETTEEEEEE-----TTEEEEEETTTCC-EEEEECSSTTCTTEEEE
T ss_pred CCCEEEEEECCCC---eEEEEECC--CCcEEEEEecCCCEEEEE-----eCccEEeecccce-eeEEeeeecCCCcccce
Confidence 3567888888765 23455432 233456778999876543 2369999999997 6666532211 1
Q ss_pred eEEeeeeCCEEEEEEcCCC--CCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcC
Q 010654 80 DTAASHRGNHFFITRRSDE--LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~ 155 (505)
+..+.|+|+ ||+.+.... .....+|+++- +....+.. ... ....+.|+++. ++++-. ....++.|+++
T Consensus 107 d~~vd~~G~-iw~~~~~~~~~~~~g~l~~~~~---g~~~~~~~-~~~-~~Ng~~~s~d~~~l~~~dt--~~~~I~~~~~d 178 (295)
T d2ghsa1 107 DGRMHPSGA-LWIGTMGRKAETGAGSIYHVAK---GKVTKLFA-DIS-IPNSICFSPDGTTGYFVDT--KVNRLMRVPLD 178 (295)
T ss_dssp EEEECTTSC-EEEEEEETTCCTTCEEEEEEET---TEEEEEEE-EES-SEEEEEECTTSCEEEEEET--TTCEEEEEEBC
T ss_pred eeEECCCCC-EEEEeccccccccceeEeeecC---CcEEEEee-ccC-CcceeeecCCCceEEEeec--ccceeeEeeec
Confidence 223778885 666654321 23356776652 33332222 212 24578888764 444433 33567888876
Q ss_pred CC
Q 010654 156 AV 157 (505)
Q Consensus 156 ~~ 157 (505)
.+
T Consensus 179 ~~ 180 (295)
T d2ghsa1 179 AR 180 (295)
T ss_dssp TT
T ss_pred cc
Confidence 43
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.91 E-value=0.33 Score=43.16 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=77.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..+.+|++.++. ....+. ...-.....|+|++++++.... ...+.+.|+.++. ............ ..|+||
T Consensus 205 ~~v~i~d~~~~~--~~~~~~--~~~~i~~l~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~~~~~~~~~i~~v~~s~~ 276 (337)
T d1gxra_ 205 NTVRSWDLREGR--QLQQHD--FTSQIFSLGYCPTGEWLAVGME---SSNVEVLHVNKPD-KYQLHLHESCVLSLKFAYC 276 (337)
T ss_dssp SEEEEEETTTTE--EEEEEE--CSSCEEEEEECTTSSEEEEEET---TSCEEEEETTSSC-EEEECCCSSCEEEEEECTT
T ss_pred ccccccccccce--eecccc--cccceEEEEEcccccccceecc---ccccccccccccc-cccccccccccceEEECCC
Confidence 458888987642 222332 2223446789999999876443 3458888988875 444333332322 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~ 154 (505)
|+.|+-.+.+ ..|.++++.. +.....+.+ ...+..++|+++ ..+++...++. +.+|++
T Consensus 277 g~~l~s~s~D-----g~i~iwd~~~-~~~~~~~~~--~~~v~~~~~s~d~~~l~t~s~D~~--I~vWdl 335 (337)
T d1gxra_ 277 GKWFVSTGKD-----NLLNAWRTPY-GASIFQSKE--SSSVLSCDISVDDKYIVTGSGDKK--ATVYEV 335 (337)
T ss_dssp SSEEEEEETT-----SEEEEEETTT-CCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSC--EEEEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCC-CCEEEEccC--CCCEEEEEEeCCCCEEEEEeCCCe--EEEEEE
Confidence 9977654432 3788888876 333223333 235778889886 44555556654 566664
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.87 E-value=0.018 Score=54.85 Aligned_cols=136 Identities=10% Similarity=0.039 Sum_probs=77.0
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC--------------c--hhHHHHHHCCcEEEEEcccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF--------------N--SSRLSLLDRGFIFAIAQIRG 302 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~--------------~--~~~~~l~~~G~~v~~~d~rG 302 (505)
...++..+..|++ +... ++ ...|+++++-||||++...+. . .....|.+. ..++.+|.+-
T Consensus 27 ~~~~~~~lffw~~-~s~~-~~-~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~-anllfIDqPv 102 (452)
T d1ivya_ 27 KSSGSKHLHYWFV-ESQK-DP-ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVLYLESPA 102 (452)
T ss_dssp ECSTTEEEEEEEE-CCSS-CG-GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGS-SEEEEECCST
T ss_pred ecCCCceEEEEEE-EcCC-CC-CCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcc-cCEEEEecCC
Confidence 4455667766644 4432 22 457999999999986532110 0 011235554 5788889653
Q ss_pred CCCCchhHHHcccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhh---CC-CceeEEEecCCch
Q 010654 303 GGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RP-DLFKAAVAAVPFV 377 (505)
Q Consensus 303 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~---~p-~~~~a~v~~~~~~ 377 (505)
+.||...-. ......-.....|+..++. ++...+.....++.|+|.||||..+..++.. .+ -.+++++...|++
T Consensus 103 GtGfS~~~~-~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 103 GVGFSYSDD-KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp TSTTCEESS-CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred CcccccCCC-CCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence 334322100 0000111123455555554 4454444445689999999999977666532 22 2478999999987
Q ss_pred hh
Q 010654 378 DV 379 (505)
Q Consensus 378 d~ 379 (505)
|.
T Consensus 182 d~ 183 (452)
T d1ivya_ 182 SY 183 (452)
T ss_dssp BH
T ss_pred Cc
Confidence 63
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.60 E-value=0.019 Score=52.79 Aligned_cols=115 Identities=10% Similarity=-0.086 Sum_probs=66.1
Q ss_pred EEeCCCcEEEEEe--ccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC-----CCCCceEEEeeCC
Q 010654 38 QASESKKFLFIAS--ESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD-----ELFNSELLACPVD 110 (505)
Q Consensus 38 ~~SpDg~~i~~~~--~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~~~l~~~~~~ 110 (505)
+.++||+...+.. .......||++|.++++ +.............|||||+.|++.+... +.....|.++|..
T Consensus 26 a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~-~~~~~~~~~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~ 104 (368)
T d1mdah_ 26 GPGAISRRSHITLPAYFAGTTENWVSCAGCGV-TLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV 104 (368)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTE-EEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT
T ss_pred ccCCCCcceeEEeeccCCCcceEEEEeCCCCc-EEEEEeCCCCCcceECCCCCEEEEEcccCccccccccCCeEEEEECC
Confidence 3468888765543 33456789999999986 44333322122345999999999987531 1222468899987
Q ss_pred CCCCceEEEc--CCCC----ceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSETTVLIP--HRES----VKLQDIQLFIDH--LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~~~~~--~~~~----~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~ 156 (505)
+ ++....+. .... .....+.+++|+ +++. +. ....+.++++..
T Consensus 105 t-~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va-~~-~~~~v~~~d~~~ 155 (368)
T d1mdah_ 105 T-FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFF-LF-GSSAAAGLSVPG 155 (368)
T ss_dssp T-CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEE-EC-SSSCEEEEEETT
T ss_pred C-CcEeeeecCCccceecccCCccceEECCCCCEEEEE-eC-CCCeEEEEECCC
Confidence 6 43333222 1111 112356777774 4433 32 224577788763
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.46 E-value=0.19 Score=43.70 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=59.7
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.....++|||+.++..... .+.+.+... ...+..........++||++.|+.-+.. ..+.++|+.+..
T Consensus 102 ~~~~~~s~~g~~~~~~~~~----~i~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~i~~~d~~~~~ 169 (299)
T d1nr0a2 102 PLGLAVSADGDIAVAACYK----HIAIYSHGK---LTEVPISYNSSCVALSNDKQFVAVGGQD-----SKVHVYKLSGAS 169 (299)
T ss_dssp EEEEEECTTSSCEEEEESS----EEEEEETTE---EEEEECSSCEEEEEECTTSCEEEEEETT-----SEEEEEEEETTE
T ss_pred ccccccccccccccccccc----ccccccccc---cccccccccccccccccccccccccccc-----cccccccccccc
Confidence 3456799999977654332 355555332 2222212212234589999988766543 378888876522
Q ss_pred CceE-EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 114 ETTV-LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 114 ~~~~-~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
.... ...+ ...+..+.++++. .+++...++ .+.+|++..
T Consensus 170 ~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~--~i~~~~~~~ 210 (299)
T d1nr0a2 170 VSEVKTIVH--PAEITSVAFSNNGAFLVATDQSR--KVIPYSVAN 210 (299)
T ss_dssp EEEEEEEEC--SSCEEEEEECTTSSEEEEEETTS--CEEEEEGGG
T ss_pred ccccccccc--ccccccccccccccccccccccc--ccccccccc
Confidence 1221 2222 2347788888864 444445554 477888763
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.42 E-value=0.31 Score=42.78 Aligned_cols=130 Identities=8% Similarity=0.037 Sum_probs=75.1
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cce-eEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGV-DTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~-~~~~s 84 (505)
..+.+|++.++ +....+.. .......++|+|||++|+.... ...+.+.|+........+.... ... ...|+
T Consensus 206 ~~v~i~d~~~~--~~~~~~~~-h~~~i~~v~~~p~~~~l~s~s~---d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
T d1tbga_ 206 ASAKLWDVREG--MCRQTFTG-HESDINAICFFPNGNAFATGSD---DATCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp TEEEEEETTTT--EEEEEECC-CSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred ceEEEEECCCC--cEEEEEeC-CCCCeEEEEECCCCCEEEEEeC---CCeEEEEeecccccccccccccccCceEEEEEC
Confidence 46888998664 23333332 2233446789999998765443 2357778887764222222111 122 23499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEE
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTY 152 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~ 152 (505)
|+|+.|+.-+.+ ..++++|+.. +...-.+..... .+..++|+++. ++++...++. +.+|
T Consensus 280 ~~~~~l~~g~~d-----g~i~iwd~~~-~~~~~~~~~H~~-~V~~l~~s~d~~~l~s~s~Dg~--v~iW 339 (340)
T d1tbga_ 280 KSGRLLLAGYDD-----FNCNVWDALK-ADRAGVLAGHDN-RVSCLGVTDDGMAVATGSWDSF--LKIW 339 (340)
T ss_dssp SSSCEEEEEETT-----SCEEEEETTT-CCEEEEECCCSS-CEEEEEECTTSSCEEEEETTSC--EEEE
T ss_pred CCCCEEEEEECC-----CEEEEEECCC-CcEEEEEcCCCC-CEEEEEEeCCCCEEEEEccCCE--EEEe
Confidence 999877665533 3688889875 332223443333 57889998874 4555566654 4444
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=95.31 E-value=0.03 Score=50.11 Aligned_cols=68 Identities=7% Similarity=0.197 Sum_probs=47.3
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee-ccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+++|++|++++..... +.|.++|+++++..+.+. +...+. ...|||||+++|+....+ ..|+++|+.+
T Consensus 2 ~a~~~~~~~l~~~~~~---~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~----~~v~~~d~~t 71 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYP---NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY----GDIYGIDLDT 71 (346)
T ss_dssp CCCCTTCEEEEEEETT---TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT----TEEEEEETTT
T ss_pred ccCCCCCcEEEEEcCC---CEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCC----CcEEEEeCcc
Confidence 5689999998765443 469999999986223332 222222 345999999998876542 4899999876
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=95.30 E-value=0.48 Score=42.93 Aligned_cols=164 Identities=14% Similarity=0.092 Sum_probs=79.4
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC--
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNT-- 112 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-- 112 (505)
..+||||+.|+.... ..-..|.++.+++. .........+ ....+++||+.+|+.....+ ...++.++....
T Consensus 45 la~s~d~~~ly~~~~--~~~~~~~i~~~~~~-~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~--~~~v~~~~~~~~~~ 119 (365)
T d1jofa_ 45 MTFDHERKNIYGAAM--KKWSSFAVKSPTEI-VHEASHPIGGHPRANDADTNTRAIFLLAAKQP--PYAVYANPFYKFAG 119 (365)
T ss_dssp EEECTTSSEEEEEEB--TEEEEEEEEETTEE-EEEEEEECCSSGGGGCTTSCCEEEEEEECSST--TCCEEEEEESSSCC
T ss_pred EEEcCCCCEEEEEeC--CcEEEEEEeCCCCe-EEEeeecCCCCcEEEEECCCCCEEEEEEecCC--CCEEEEeEccCCCC
Confidence 578999999876543 23456777766543 2222211111 11238899998877764321 234443332210
Q ss_pred ----------CCc-eE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeee
Q 010654 113 ----------SET-TV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179 (505)
Q Consensus 113 ----------~~~-~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (505)
+.. .- ....+....+..+.+++|+.+++....+..++++|+.+..+. +... ..+..+......
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~-~~~~---~~~~~~~~g~gP 195 (365)
T d1jofa_ 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-VELV---GSVDAPDPGDHP 195 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-EEEE---EEEECSSTTCCE
T ss_pred cceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc-eeec---cceeecCCCCce
Confidence 110 00 111122223557788887654444555667788888765443 1111 111111110011
Q ss_pred cCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 180 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
..+.++++++.+++..+. -.++..++...+
T Consensus 196 r~i~f~pdg~~~yv~~e~---~~~V~v~~~~~~ 225 (365)
T d1jofa_ 196 RWVAMHPTGNYLYALMEA---GNRICEYVIDPA 225 (365)
T ss_dssp EEEEECTTSSEEEEEETT---TTEEEEEEECTT
T ss_pred EEEEECCCCceEEEeccC---CCEEEEEEecCC
Confidence 123467788866555432 235555554443
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.03 E-value=0.037 Score=50.92 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=17.5
Q ss_pred CcEEEEeeChHHHHHHHHHhh
Q 010654 342 EKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~ 362 (505)
++|-|+||||||..+-.++..
T Consensus 105 ~kVnLIgHS~GGld~Ryl~~~ 125 (388)
T d1ku0a_ 105 GRVHIIAHSQGGQTARMLVSL 125 (388)
T ss_dssp CCEEEEEETTHHHHHHHHHHH
T ss_pred CceeEeecccccHHHHHHHHH
Confidence 589999999999887776654
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.91 E-value=0.82 Score=39.90 Aligned_cols=171 Identities=12% Similarity=0.022 Sum_probs=88.6
Q ss_pred ceEEEEECCCCCCCCeEEEEe-cC-Cce-EEEEEEeCCCcEEEEEeccc---cceEEEEEeCCCCCceeeeeccccc-ee
Q 010654 8 DKAWLHKLEADQSNDICLYHE-KD-DIY-SLGLQASESKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRVVG-VD 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~-~~-~~~-~~~~~~SpDg~~i~~~~~~~---~~~~l~~~d~~~~~~~~~l~~~~~~-~~ 80 (505)
..+++++..++ +.+.+... .+ +.. .-+....|+|+..+-..... ....+|.++ +++ ++.+...... .-
T Consensus 78 ~gl~~~d~~tg--~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~--~g~-~~~~~~~~~~~Ng 152 (295)
T d2ghsa1 78 DGLFLRDTATG--VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTKLFADISIPNS 152 (295)
T ss_dssp TEEEEEETTTC--CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEEEEEESSEEE
T ss_pred CccEEeecccc--eeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeec--CCc-EEEEeeccCCcce
Confidence 35888888765 23334331 11 222 23667899998543332221 234556554 454 5555433211 12
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC-----CCceE-EEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNT-----SETTV-LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 153 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-----~~~~~-~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~ 153 (505)
..|++|++.+|+.... ..+|++++++.. +.... .-.......+.++..+.+ .++++....+ ++..|+
T Consensus 153 ~~~s~d~~~l~~~dt~----~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g--~V~~~d 226 (295)
T d2ghsa1 153 ICFSPDGTTGYFVDTK----VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG--AVDRYD 226 (295)
T ss_dssp EEECTTSCEEEEEETT----TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT--EEEEEC
T ss_pred eeecCCCceEEEeecc----cceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCC--ceEEec
Confidence 3499999999988754 248888876531 11121 112233345667777776 4555554444 466676
Q ss_pred cCCCCCcccccCCCceeeccCCeeeecCCCC-cccCCEEEEEEecCC
Q 010654 154 LPAVGEPLKSLQGGKSVEFIDPVYSIDPSES-VFSSRILRFHYSSLR 199 (505)
Q Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 199 (505)
-+ |+.+ ..+.+|... .....+ -++.++++++..+..
T Consensus 227 p~--G~~~------~~i~lP~~~--~T~~~FGG~d~~~LyvTta~~~ 263 (295)
T d2ghsa1 227 TD--GNHI------ARYEVPGKQ--TTCPAFIGPDASRLLVTSAREH 263 (295)
T ss_dssp TT--CCEE------EEEECSCSB--EEEEEEESTTSCEEEEEEBCTT
T ss_pred CC--CcEe------eEecCCCCc--eEEEEEeCCCCCEEEEEECCcC
Confidence 43 5533 234444321 110111 146678887766543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=94.85 E-value=0.32 Score=42.80 Aligned_cols=133 Identities=15% Similarity=0.199 Sum_probs=69.2
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--------cce--
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--------VGV-- 79 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--------~~~-- 79 (505)
++.+++.+.......+...+...+.-+..+.+||+.++ . ......+|.+|..++. ........ ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v-~--~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 166 (302)
T d2p4oa1 91 IPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLT-A--DSYRGAIWLIDVVQPS-GSIWLEHPMLARSNSESVFPA 166 (302)
T ss_dssp CEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEE-E--ETTTTEEEEEETTTTE-EEEEEECGGGSCSSTTCCSCS
T ss_pred EEEEEecccccceeeccccCCccccceeEEccCCCEEe-e--ccccccceeeeccCCc-ceeEecCCccceeeccCcccc
Confidence 34444433333334444434444445677889997543 2 2234578889888775 32221110 000
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCce--EEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEc
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT--VLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~ 154 (505)
...++.+++.+|+.... ..++++++..+.+... ..+... ..+.++.++.++ ++++...++ ++..++.
T Consensus 167 ~ngi~~~~~~l~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~--~~pdgia~d~dG~l~va~~~~~--~V~~i~p 236 (302)
T d2p4oa1 167 ANGLKRFGNFLYVSNTE----KMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYN--SVVRIAP 236 (302)
T ss_dssp EEEEEEETTEEEEEETT----TTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTC--CEEEECT
T ss_pred cccccccCCceeeecCC----CCeEEeccccccccccccccccCC--CCCcceEECCCCCEEEEEcCCC--cEEEECC
Confidence 11267788888887654 2589999986532211 122221 124567888775 444444433 4555653
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=94.79 E-value=0.98 Score=39.39 Aligned_cols=122 Identities=9% Similarity=0.059 Sum_probs=67.0
Q ss_pred eEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCC
Q 010654 23 ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFN 101 (505)
Q Consensus 23 ~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~ 101 (505)
+.+...+++.|..+++++|||+. +++ ......||+++.++. .+.+.....+.. ..+++||+ +|+....+
T Consensus 19 ~v~~~~p~~~~~e~iAv~pdG~l-~vt--~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~-l~v~~~~~---- 88 (302)
T d2p4oa1 19 KIITSFPVNTFLENLASAPDGTI-FVT--NHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGD-LVATGWNA---- 88 (302)
T ss_dssp EEEEEECTTCCEEEEEECTTSCE-EEE--ETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSC-EEEEEECT----
T ss_pred cEEEECCCCCCcCCEEECCCCCE-EEE--eCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCC-eEEEecCC----
Confidence 34555566677778999999985 333 223568999997754 444433322221 34899997 56555432
Q ss_pred ceEEEeeCCCC-CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 102 SELLACPVDNT-SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 102 ~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
..+++++.... +....+........+.++.+..++.+++.... ...++.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~-~~~i~~~~~~ 142 (302)
T d2p4oa1 89 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-RGAIWLIDVV 142 (302)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-TTEEEEEETT
T ss_pred ceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccc-cccceeeecc
Confidence 23444444321 23333333333444667777777555444332 2345556544
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.11 E-value=0.38 Score=44.56 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=42.8
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+++|.+.+++...+ +...|.++|+++++.++.+.....-....|||||+++|..+.+ ..+.++|+++
T Consensus 25 ~~~~d~~~~~~V~~~-~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d-----~~v~vwd~~t 92 (426)
T d1hzua2 25 LNDLDLPNLFSVTLR-DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-----ARIDMIDLWA 92 (426)
T ss_dssp CSCCCGGGEEEEEET-TTTEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETT-----SEEEEEETTS
T ss_pred cccCCCCeEEEEEEc-CCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCC-----CCEEEEEccC
Confidence 355676655544333 4567899999998744445433211223499999998765532 2678888876
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.93 E-value=0.082 Score=49.54 Aligned_cols=132 Identities=11% Similarity=0.061 Sum_probs=72.9
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch---------------hHHHHHHCCcEEEEEcccCCCCCc
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---------------SRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~---------------~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
+..+..| +.+... + ..+.|+|+++-||||.+...++.. ....|.+. ..++.+|.+-+.||.
T Consensus 27 ~~~lfyw-~~~s~~-~-~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~-anllfiD~PvGtGfS 102 (421)
T d1wpxa1 27 DKHFFFW-TFESRN-D-PAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSN-ATVIFLDQPVNVGFS 102 (421)
T ss_dssp CCEEEEE-EECCSS-C-TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGS-SEEEEECCSTTSTTC
T ss_pred CceEEEE-EEEeCC-C-CCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccc-cCEEEEecCCCCCce
Confidence 4567666 444433 2 256799999999998753211100 01134443 478888855444443
Q ss_pred hhHHHcccccCCcchHHHHHHHHHHHHHc-CCC--CCCcEEEEeeChHHHHHHHHHhh---CCC---ceeEEEecCCchh
Q 010654 308 RQWYENGKFLKKKNTFTDFIACAEYLIKN-CYC--TKEKLCIEGRSAGGLLIGAVLNM---RPD---LFKAAVAAVPFVD 378 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~--d~~rv~i~G~S~GG~~~~~~~~~---~p~---~~~a~v~~~~~~d 378 (505)
..-. .....-....+|+..+++...+. +.. -...+.|+|.||||..+-.++.. +.+ -+++++...|++|
T Consensus 103 y~~~--~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 103 YSGS--SGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp BCSS--CCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred ecCC--ccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence 2100 01111113445666666543333 322 23579999999999976655522 222 4789999999887
Q ss_pred hh
Q 010654 379 VL 380 (505)
Q Consensus 379 ~~ 380 (505)
..
T Consensus 181 p~ 182 (421)
T d1wpxa1 181 PL 182 (421)
T ss_dssp HH
T ss_pred ch
Confidence 53
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.89 E-value=0.46 Score=42.04 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=60.5
Q ss_pred ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc---eeEE-eeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 32 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTA-ASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~---~~~~-~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
.+...++|+||+..++++... ...|.++|+.+++..+.+...... ..+. ..|||+.|+-.+.+ ..|.+.
T Consensus 206 ~~v~~v~~~pd~~~~l~s~~~--d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D-----~~i~iw 278 (325)
T d1pgua1 206 SFVRDVEFSPDSGEFVITVGS--DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVW 278 (325)
T ss_dssp CCEEEEEECSTTCCEEEEEET--TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEE
T ss_pred CccEEeeeccccceecccccc--ccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCC-----CeEEEE
Confidence 345577899986554554332 234778898888633444322211 1222 22788887655533 257777
Q ss_pred eCCCCCCceEEEc-CCCC--ceeeEEEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 108 PVDNTSETTVLIP-HRES--VKLQDIQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 108 ~~~~~~~~~~~~~-~~~~--~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
|+.. ++....+. +... .....+.|.++..++....++. +.+|++
T Consensus 279 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~--i~vwdl 325 (325)
T d1pgua1 279 DVTT-SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT--LNFYEL 325 (325)
T ss_dssp ETTT-TEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC--EEEEET
T ss_pred ECCC-CCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCE--EEEEEC
Confidence 8875 32211222 2221 1223566666656666666653 556654
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.79 E-value=0.35 Score=41.61 Aligned_cols=113 Identities=7% Similarity=0.066 Sum_probs=58.6
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee--eecccccee-EEeeeeCCEEEEEEcCC-----CCCCceEE
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV--LTPRVVGVD-TAASHRGNHFFITRRSD-----ELFNSELL 105 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~--l~~~~~~~~-~~~s~dg~~l~~~~~~~-----~~~~~~l~ 105 (505)
...++|||||++|+..... ..+.+.|+.++. ... +..+..... ..|+|+++......... ++....++
T Consensus 165 v~~~~~s~~~~~l~~g~~d---g~i~i~d~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~ 240 (287)
T d1pgua2 165 PSYISISPSETYIAAGDVM---GKILLYDLQSRE-VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240 (287)
T ss_dssp EEEEEECTTSSEEEEEETT---SCEEEEETTTTE-EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred eeEEEeccCcccccccccc---ccccceeecccc-cccccccccccccceeeecccccccccccCCCCeeEeecCCCeEE
Confidence 3467899999998765433 357888888764 221 122221221 23776654322211110 01123688
Q ss_pred EeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 106 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
+.++.........+.... ..+..+.|.++..+++...++. +.+|+
T Consensus 241 iw~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~l~s~g~D~~--v~iW~ 285 (287)
T d1pgua2 241 IYSVKRPMKIIKALNAHK-DGVNNLLWETPSTLVSSGADAC--IKRWN 285 (287)
T ss_dssp EEESSCTTCCEEETTSST-TCEEEEEEEETTEEEEEETTSC--EEEEE
T ss_pred EEECCCCCeEEEEeCCCC-CCeEEEEECCCCEEEEEECCCe--EEEEE
Confidence 888765232211222222 3478888888766677777764 45555
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.53 E-value=1.1 Score=39.47 Aligned_cols=185 Identities=10% Similarity=0.019 Sum_probs=89.3
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeC--CCcEEEEEeccccceEEEEEeCCCCCceeeee--------ccccce
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASE--SKKFLFIASESKITRFVFYLDVSKPEELRVLT--------PRVVGV 79 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~--------~~~~~~ 79 (505)
++.++.+.........+.+........++||| ||++|+ +.... ..|.+.|+..+.....+. ......
T Consensus 42 i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~la-sgs~D--g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v 118 (325)
T d1pgua1 42 VRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC-SGDES--GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 118 (325)
T ss_dssp EEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEE-EEETT--SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred EEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEE-EEeCC--CCEEEeeecCCcceeeeecccccccccccCcE
Confidence 33444444333333344332223445678998 566654 33222 234444544332111111 111111
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCC
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~ 156 (505)
...|+++|+.++..+... ...+.+.+++. +.....+... ...+..+.|.++ .++++...++. +.+|++..
T Consensus 119 ~~v~~s~~~~~l~~~~~~~---~~~~~~~~~~~-~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~d~~--v~~~d~~~ 191 (325)
T d1pgua1 119 SDISWDFEGRRLCVVGEGR---DNFGVFISWDS-GNSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDGS--VVFYQGPP 191 (325)
T ss_dssp EEEEECTTSSEEEEEECCS---SCSEEEEETTT-CCEEEECCSC-SSCEEEEEECSSSSCEEEEEETTTE--EEEEETTT
T ss_pred EEEEECCCCCccceeeccc---cceEEEEeecc-cccceeeeec-ccccccccccccccceEEEeecccc--cccccccc
Confidence 234999999998887542 13455666654 3322233322 334777888775 45666666664 56677652
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++....+. ........+..+.++|+++.++++.+.. ..+.+++..+++
T Consensus 192 -~~~~~~~~-----~~~~~~~~v~~v~~~pd~~~~l~s~~~d---~~i~iwd~~~~~ 239 (325)
T d1pgua1 192 -FKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSD---RKISCFDGKSGE 239 (325)
T ss_dssp -BEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETT---CCEEEEETTTCC
T ss_pred -cccceecc-----cccCCCCccEEeeeccccceeccccccc---cceeeeeecccc
Confidence 11111000 0101111122234567766666666543 457777877776
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.28 E-value=0.84 Score=41.41 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=57.0
Q ss_pred CceEEEEECCCCCCCCeEEEEec-----CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee--------
Q 010654 7 PDKAWLHKLEADQSNDICLYHEK-----DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-------- 73 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~-----~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-------- 73 (505)
...|.+|++.++. ....++.. .......++|||||++|+..+.......+.+.|++++.....+.
T Consensus 204 Dg~i~iwd~~~~~--~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~ 281 (393)
T d1sq9a_ 204 NGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 281 (393)
T ss_dssp TSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred CCcEEEEeecccc--cccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccc
Confidence 3468889987642 22223211 12234467899999998765544444567778998876223332
Q ss_pred -----cccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 74 -----PRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 74 -----~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+...+. ..|+|||+.|+=-+.+ ..|.+.|+++
T Consensus 282 ~~~~~gH~~~V~~l~fspd~~~l~S~s~D-----~~v~vWd~~~ 320 (393)
T d1sq9a_ 282 SLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKT 320 (393)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTT
T ss_pred eeeeecccCceeeeccCCCCCeeEEECCC-----CEEEEEECCC
Confidence 1111222 3499999876533322 3778888876
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.98 E-value=2.1 Score=36.83 Aligned_cols=105 Identities=10% Similarity=0.100 Sum_probs=56.8
Q ss_pred EeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEE
Q 010654 39 ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVL 118 (505)
Q Consensus 39 ~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 118 (505)
+++||++|+.... ...|.+.|+..++....+... ......++++++.|+..+.+ ..+.++++.. ......
T Consensus 183 ~~~~~~~l~s~~~---dg~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~s~d-----~~i~iwd~~~-~~~~~~ 252 (342)
T d2ovrb2 183 LQFDGIHVVSGSL---DTSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNILVSGNAD-----STVKIWDIKT-GQCLQT 252 (342)
T ss_dssp EEECSSEEEEEET---TSCEEEEETTTCCEEEEECCC-CSCEEEEEEETTEEEEEETT-----SCEEEEETTT-CCEEEE
T ss_pred ccCCCCEEEEEeC---CCeEEEeecccceeeeEeccc-ccceeEEecCCCEEEEEcCC-----CEEEEEeccc-cccccc
Confidence 4556666543322 235777888877522222222 23334577888876655432 3678888765 222223
Q ss_pred EcCC--CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 119 IPHR--ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 119 ~~~~--~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+... ....+..+.++++.+ ++...++ .+.+|++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-~s~s~Dg--~i~iwd~~t 289 (342)
T d2ovrb2 253 LQGPNKHQSAVTCLQFNKNFV-ITSSDDG--TVKLWDLKT 289 (342)
T ss_dssp ECSTTSCSSCEEEEEECSSEE-EEEETTS--EEEEEETTT
T ss_pred ccccceeeeceeecccCCCee-EEEcCCC--EEEEEECCC
Confidence 3221 123445666666654 4445555 478899864
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=92.80 E-value=0.66 Score=37.83 Aligned_cols=132 Identities=20% Similarity=0.163 Sum_probs=74.5
Q ss_pred ceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCc--eeeEEE
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV--KLQDIQ 131 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~i~~~~ 131 (505)
...+++.|+.+|. ++.+++.+.... .+.+++.+-..=..+. .+ .++..+|+.....++.-+++.... ....+.
T Consensus 166 ~~sfF~adl~SG~-lri~tpkeGS~~~ay~~~gnKV~sdyEt~--gE-sywit~D~~s~~yerve~P~kd~~sy~p~~I~ 241 (313)
T d2hu7a1 166 RVSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMKVTAGLETA--RE-ARLVTVDPRDGSVEDLELPSKDFSSYRPTAIT 241 (313)
T ss_dssp EEEEEEEETTTEE-EEEECCSSEEEEEEEECTTSCEEEEEEES--SC-EEEEEECTTTCCEEECCCSSCHHHHHCCSEEE
T ss_pred cceEEEEecccCC-EEEecCCCCcccceeEccCceeeeccCCC--Cc-eEEEEEecccCceeeeecCcccceeecceEEE
Confidence 4468999998886 999998763222 2366655542212222 12 455567876533333233332110 112344
Q ss_pred ---EeC-CEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEE
Q 010654 132 ---LFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDY 207 (505)
Q Consensus 132 ---~~~-d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 207 (505)
..+ |++.+++.++|++.+++ + |+ .+.-|.. .+.+. ..=++.++|+.+|..+|+.+..+
T Consensus 242 ~~~Y~Pdd~L~iiakrdG~s~lF~---n--Gk---------~in~p~G--~~~ga--t~i~~~iyfshsSL~tP~kI~~~ 303 (313)
T d2hu7a1 242 WLGYLPDGRLAVVARREGRSAVFI---D--GE---------RVEAPQG--NHGRV--VLWRGKLVTSHTSLSTPPRIVSL 303 (313)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEE---T--TE---------EECCCSS--EEEEE--EEETTEEEEEEEETTEEEEEEEE
T ss_pred eeeeCCCCcEEEEEecCCchheee---c--ce---------EecCCCC--cccce--EEECCEEEEeecccCCCceeEEc
Confidence 345 46889999999987653 3 32 2222222 22221 12257799999999999998876
Q ss_pred E
Q 010654 208 D 208 (505)
Q Consensus 208 ~ 208 (505)
.
T Consensus 304 ~ 304 (313)
T d2hu7a1 304 P 304 (313)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=92.75 E-value=2 Score=34.88 Aligned_cols=104 Identities=8% Similarity=0.013 Sum_probs=61.6
Q ss_pred CcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC--CEEEEEEcC-CCCCCceEEEeeCCCCCCceEEE
Q 010654 43 KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG--NHFFITRRS-DELFNSELLACPVDNTSETTVLI 119 (505)
Q Consensus 43 g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg--~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~ 119 (505)
+..+++...+....++|+++ +++ ...|+...-. ....|.. ..+.|.++- .+.+.-.||.+++..+|++. .+
T Consensus 25 ~d~ll~~~~seG~vni~~l~--g~~-~vkLtkePI~--~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~-~i 98 (313)
T d2hu7a1 25 GDKLLVVGFSEGSVNAYLYD--GGE-TVKLNREPIN--SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL 98 (313)
T ss_dssp TTEEEEEEEETTEEEEEEES--SSS-CEECCSSCCS--EECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEE-EC
T ss_pred CCcEEEEEeccceEEEEEEe--CCE-EEEEeccccc--CcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeee-Ee
Confidence 33344444444455677765 443 6666654311 1222222 356777664 35567799999998666665 56
Q ss_pred cCCCCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 120 PHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 120 ~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
.......|.+...+++.++|+-..+....+++.
T Consensus 99 ~spk~vRI~S~~yddk~vvF~Gased~~~LYvi 131 (313)
T d2hu7a1 99 EAVKPMRILSGVDTGEAVVFTGATEDRVALYAL 131 (313)
T ss_dssp TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEE
T ss_pred cCCceEEEEEeeecCceEEEecccCCceEEEEE
Confidence 655445677888888888888665544445444
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.00 E-value=3.4 Score=36.51 Aligned_cols=110 Identities=9% Similarity=0.095 Sum_probs=58.8
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
...++|||||++|+..... ..+.+.|...++....+........ ..+++++..++..+.. ..+.+.+...
T Consensus 124 V~~l~~s~~~~~l~s~~~d---g~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~- 194 (388)
T d1erja_ 124 IRSVCFSPDGKFLATGAED---RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRT- 194 (388)
T ss_dssp EEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT-
T ss_pred EEEEEECCCCCcceecccc---cccccccccccccccccccccccccccccccccccccccccc-----eeeeeeeccc-
Confidence 3467899999998755432 3477788877752222222222222 3488888877766543 3677777765
Q ss_pred CCceEEEcCCCCceeeEEEEeC-C-EEEEEEecCCeeEEEEEEcCC
Q 010654 113 SETTVLIPHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~-d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.......... .. ...+.+.. + .++++...++ .+.++++..
T Consensus 195 ~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~~~d~--~i~i~~~~~ 236 (388)
T d1erja_ 195 GQCSLTLSIE-DG-VTTVAVSPGDGKYIAAGSLDR--AVRVWDSET 236 (388)
T ss_dssp TEEEEEEECS-SC-EEEEEECSTTCCEEEEEETTS--CEEEEETTT
T ss_pred cccccccccc-cc-cccccccCCCCCeEEEEcCCC--eEEEeeccc
Confidence 2222122222 21 22333332 3 4555555555 366777653
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.97 E-value=3.4 Score=35.56 Aligned_cols=50 Identities=6% Similarity=0.058 Sum_probs=33.6
Q ss_pred eEEEeeCCCCCCc-eEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEc
Q 010654 103 ELLACPVDNTSET-TVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 103 ~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
.|.+.|+++ ++. ...+....+ .+..+.++++.+++....+|...+++++.
T Consensus 304 ~i~vwd~~t-g~~~~~~~~~~~~-~V~~v~~~~~~~~~~~s~dg~~~l~~~df 354 (355)
T d1nexb2 304 QFNIYNLRS-GKLVHANILKDAD-QIWSVNFKGKTLVAAVEKDGQSFLEILDF 354 (355)
T ss_dssp EEEEEETTT-CCBCCSCTTTTCS-EEEEEEEETTEEEEEEESSSCEEEEEEEC
T ss_pred EEEEEECCC-CCEEEEEecCCCC-CEEEEEEcCCeEEEEEECCCcEEEEEEeC
Confidence 688888875 322 112222223 57788999999888888888877777764
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=91.88 E-value=0.94 Score=39.35 Aligned_cols=91 Identities=13% Similarity=0.107 Sum_probs=55.6
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGN 88 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~ 88 (505)
.++.+++.++.. ......+.........++|++++++.. .+.+.++|+.+++....+.....-....|||||+
T Consensus 220 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~ 292 (337)
T d1pbyb_ 220 GLLTMDLETGEM--AMREVRIMDVFYFSTAVNPAKTRAFGA-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTTCCE--EEEEEEECSSCEEEEEECTTSSEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSC
T ss_pred cEEEEEcCCCcE--EEEEecCCCcceEEEEecccceEEEEc-----cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCC
Confidence 477778766532 222222334445566789999987654 2468899999886222232221112245999999
Q ss_pred EEEEEEcCCCCCCceEEEeeCCC
Q 010654 89 HFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 89 ~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+||..... ..|.++|.++
T Consensus 293 ~l~v~~~~-----~~i~v~D~~t 310 (337)
T d1pbyb_ 293 TVWLGGAL-----GDLAAYDAET 310 (337)
T ss_dssp EEEEESBS-----SEEEEEETTT
T ss_pred EEEEEeCC-----CcEEEEECCC
Confidence 98865322 3689999876
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=91.84 E-value=1.7 Score=40.20 Aligned_cols=89 Identities=11% Similarity=-0.021 Sum_probs=50.4
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecccc----------------ceEEEEEeCCCCCce
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI----------------TRFVFYLDVSKPEEL 69 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~----------------~~~l~~~d~~~~~~~ 69 (505)
-+.+|-++|+.|. +...+.+-+...-.-+.++||||+.+++..+... ...+-.+|..+....
T Consensus 92 ~~~rVavIDl~t~--k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~ 169 (441)
T d1qnia2 92 ANTRVARIRLDIM--KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVA 169 (441)
T ss_dssp TTTEEEEEETTTT--EEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEE
T ss_pred CCCEEEEEECCCC--cEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceee
Confidence 3557888888775 2334444333333446789999997655432210 123445788776522
Q ss_pred eeeeccccceeEEeeeeCCEEEEEEcC
Q 010654 70 RVLTPRVVGVDTAASHRGNHFFITRRS 96 (505)
Q Consensus 70 ~~l~~~~~~~~~~~s~dg~~l~~~~~~ 96 (505)
.++.-...-....++|||+++++....
T Consensus 170 ~qI~v~~~p~~v~~spdGk~a~vt~~n 196 (441)
T d1qnia2 170 WQVIVDGNLDNTDADYTGKYATSTCYN 196 (441)
T ss_dssp EEEEESSCCCCEEECSSSSEEEEEESC
T ss_pred EEEecCCCccceEECCCCCEEEEEecC
Confidence 222211111224599999998887643
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=91.50 E-value=0.47 Score=44.99 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=24.2
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
+|||.+|..|..||+..++.+.+.|.
T Consensus 374 rVLIy~Gd~D~icn~~Gte~~i~~L~ 399 (483)
T d1ac5a_ 374 EIVLFNGDKDLICNNKGVLDTIDNLK 399 (483)
T ss_dssp EEEEEEETTCSTTCHHHHHHHHHHCE
T ss_pred EEEEEECChhhcCCCHHHHHHHHhCC
Confidence 49999999999999999999999984
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.43 E-value=1.9 Score=37.01 Aligned_cols=115 Identities=13% Similarity=0.065 Sum_probs=58.0
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCc-eeee--ecccccee-EEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVL--TPRVVGVD-TAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~-~~~l--~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
.+....++|||||++|+..+.. ..|.+.|+.++.. .... ......+. ..|+|+++.+++....+ ..+.+
T Consensus 11 ~d~I~~l~fsp~~~~L~s~s~D---g~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d----~~v~~ 83 (342)
T d1yfqa_ 11 KDYISDIKIIPSKSLLLITSWD---GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ----GEILK 83 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETT---SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT----SCEEE
T ss_pred CCCEEEEEEeCCCCEEEEEECC---CeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccc----cceee
Confidence 3445588999999988764432 2355555544431 2222 22222222 34899888777776543 36777
Q ss_pred eeCCCCCCceEEEc-CCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 107 CPVDNTSETTVLIP-HRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.++.. +....... .............++..++....++. +.++++.
T Consensus 84 w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~wd~~ 130 (342)
T d1yfqa_ 84 VDLIG-SPSFQALTNNEANLGICRICKYGDDKLIAASWDGL--IEVIDPR 130 (342)
T ss_dssp ECSSS-SSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSE--EEEECHH
T ss_pred eeccc-ccccccccccccccccccccccccccccccccccc--cceeecc
Confidence 77765 22222222 22222222233334445555555543 4566654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=89.82 E-value=0.31 Score=45.42 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=38.1
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee--cccccee-EEeeeeCCEEEEEEc
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVVGVD-TAASHRGNHFFITRR 95 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~--~~~~~~~-~~~s~dg~~l~~~~~ 95 (505)
...+||||+|++..+ .+++|-++|+++++ ...+. +...+.. ..++|||++.|+..+
T Consensus 77 t~gtpDGr~lfV~d~--~~~rVavIDl~t~k-~~~ii~iP~g~gphgi~~spdg~t~YV~~~ 135 (441)
T d1qnia2 77 TDGRYDGKYLFINDK--ANTRVARIRLDIMK-TDKITHIPNVQAIHGLRLQKVPKTNYVFCN 135 (441)
T ss_dssp ETTEEEEEEEEEEET--TTTEEEEEETTTTE-EEEEEECTTCCCEEEEEECCSSBCCEEEEE
T ss_pred ecccCCCCEEEEEcC--CCCEEEEEECCCCc-EeeEEecCCCCCccceEEeccCCEEEEEec
Confidence 345899999877544 36679999999986 44433 2222332 359999998887654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=89.42 E-value=6.1 Score=34.26 Aligned_cols=111 Identities=9% Similarity=0.100 Sum_probs=53.9
Q ss_pred EeeeeCC----EEEEEEcCCCCCCceEEEeeCCCCCCceE--EEc---CCCCceeeEEEEeCCE-EEEEEecCCeeEEEE
Q 010654 82 AASHRGN----HFFITRRSDELFNSELLACPVDNTSETTV--LIP---HRESVKLQDIQLFIDH-LAVYEREGGLQKITT 151 (505)
Q Consensus 82 ~~s~dg~----~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~ 151 (505)
.|+||++ .||+.... ..+|+++++...+.... ++. ........+++.+.++ |+++.... .++.+
T Consensus 178 ~~~~d~d~~~~~lyv~d~~----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~--g~I~~ 251 (314)
T d1pjxa_ 178 AVRHMNDGRPYQLIVAETP----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS--SHIEV 251 (314)
T ss_dssp EEEECTTSCEEEEEEEETT----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT--TEEEE
T ss_pred EECCCCCcceeEEEEEeec----ccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCC--CEEEE
Confidence 3777765 45554332 35888888754232211 221 1122235678887764 54444333 45677
Q ss_pred EEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECC
Q 010654 152 YRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
|+.+ ++... ..+..|... ...+.+.+++++++++.+. -..|++++..
T Consensus 252 ~dp~--~g~~~-----~~i~~p~~~--~t~~afg~d~~~lyVt~~~---~g~i~~~~~~ 298 (314)
T d1pjxa_ 252 FGPD--GGQPK-----MRIRCPFEK--PSNLHFKPQTKTIFVTEHE---NNAVWKFEWQ 298 (314)
T ss_dssp ECTT--CBSCS-----EEEECSSSC--EEEEEECTTSSEEEEEETT---TTEEEEEECS
T ss_pred EeCC--CCEEE-----EEEECCCCC--EEEEEEeCCCCEEEEEECC---CCcEEEEECC
Confidence 7644 33221 122322211 1112345667777665442 2467777643
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.08 E-value=2.1 Score=36.26 Aligned_cols=82 Identities=9% Similarity=0.052 Sum_probs=51.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
..+.+|++.++ +....+.. .........|+|||++|+.... ...|.+.|+.+++.+..+..+...+. ..|+||
T Consensus 227 ~~i~~~~~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~ 300 (317)
T d1vyhc1 227 KTIKMWDVSTG--MCLMTLVG-HDNWVRGVLFHSGGKFILSCAD---DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 300 (317)
T ss_dssp SEEEEEETTTT--EEEEEEEC-CSSCEEEEEECSSSSCEEEEET---TTEEEEECCTTSCCCEEEECCSSCEEEEEECSS
T ss_pred CEEEEEECCCC--cEEEEEeC-CCCCEEEEEECCCCCEEEEEEC---CCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 45788898764 22333332 2334557889999998765433 34688899988763444544333332 349999
Q ss_pred CCEEEEEEc
Q 010654 87 GNHFFITRR 95 (505)
Q Consensus 87 g~~l~~~~~ 95 (505)
|+.|+-.+.
T Consensus 301 ~~~l~s~s~ 309 (317)
T d1vyhc1 301 APYVVTGSV 309 (317)
T ss_dssp SSCEEEEET
T ss_pred CCEEEEEeC
Confidence 988775443
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.66 E-value=8.4 Score=32.65 Aligned_cols=108 Identities=6% Similarity=0.017 Sum_probs=59.6
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCce
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETT 116 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 116 (505)
.+.+++..++... ....+.+.|+.++.....+........ ..|+|+|+.|+..+.+ ..+.++++.. ....
T Consensus 191 ~~~~~~~~~~~~~---~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d-----~~i~~~~~~~-~~~~ 261 (340)
T d1tbga_ 191 SLAPDTRLFVSGA---CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRA-DQEL 261 (340)
T ss_dssp EECTTSSEEEEEE---TTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTT-TEEE
T ss_pred ccccccceeEEee---cCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeecc-cccc
Confidence 3455555443221 134577888887752333333332222 3489999987765543 3677778765 2221
Q ss_pred EEEc-CCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 117 VLIP-HRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 117 ~~~~-~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+. ......+..+.+++++ ++++...++ .+.+|++..
T Consensus 262 ~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg--~i~iwd~~~ 301 (340)
T d1tbga_ 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDF--NCNVWDALK 301 (340)
T ss_dssp EEECCTTCCSCEEEEEECSSSCEEEEEETTS--CEEEEETTT
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCC--EEEEEECCC
Confidence 1222 2223457788888874 455555555 477888763
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.32 E-value=8.5 Score=32.38 Aligned_cols=109 Identities=10% Similarity=0.063 Sum_probs=63.3
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce--eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+.-+-++.|++... ....|+++++++.. .+.+....... ...+.|..+.+|+.... ...+|+++++++ ..
T Consensus 82 lAvD~~~~~lY~~d~--~~~~I~v~~~~g~~-~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~---~~~~I~r~~~dG-s~ 154 (266)
T d1ijqa1 82 LAVDWIHSNIYWTDS--VLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNG-VD 154 (266)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECS---SSCEEEEEETTS-CC
T ss_pred EEEeeccceEEEEec--CCCEEEeEecCCce-EEEEEcCCCCCcceEEEEcccCeEEEeccC---CCcceeEeccCC-Cc
Confidence 344455666666532 34578889988765 44433322111 12367778888887532 336899999987 32
Q ss_pred ceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 010654 115 TTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.+.++..... .+.+++++. ++||++-.. ...+..++++
T Consensus 155 ~~~l~~~~~~-~p~gl~iD~~~~~lYw~d~~--~~~I~~~~~d 194 (266)
T d1ijqa1 155 IYSLVTENIQ-WPNGITLDLLSGRLYWVDSK--LHSISSIDVN 194 (266)
T ss_dssp EEEEECSSCS-CEEEEEEETTTTEEEEEETT--TTEEEEEETT
T ss_pred eecccccccc-eeeEEEeeccccEEEEecCC--cCEEEEEECC
Confidence 3324443333 356777774 566666333 3456677765
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.12 E-value=8.2 Score=32.06 Aligned_cols=62 Identities=8% Similarity=0.071 Sum_probs=35.2
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTY 152 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~ 152 (505)
.++|+|+.|+..+.+ ..|.++|+.+ ++....+..... .+..++|+++ .++++...++. +.+|
T Consensus 254 ~~~~~~~~l~s~~~d-----g~i~iwd~~~-~~~~~~~~~h~~-~V~~~~~s~~~~~l~s~s~Dg~--i~iW 316 (317)
T d1vyhc1 254 LFHSGGKFILSCADD-----KTLRVWDYKN-KRCMKTLNAHEH-FVTSLDFHKTAPYVVTGSVDQT--VKVW 316 (317)
T ss_dssp EECSSSSCEEEEETT-----TEEEEECCTT-SCCCEEEECCSS-CEEEEEECSSSSCEEEEETTSE--EEEE
T ss_pred EECCCCCEEEEEECC-----CeEEEEECCC-CcEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCe--EEEe
Confidence 377887766654432 3678888765 332223433333 4678888876 34555556653 4444
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=85.25 E-value=0.55 Score=40.37 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++..+++.+++.. ...+|.+.|||+||.++..++..
T Consensus 116 ~~~i~~~v~~~~~~~--~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 116 VNDYFPVVQEQLTAH--PTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhC--CCceEEEEecccchHHHHHHHHH
Confidence 455666666655542 12589999999999998777653
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=84.51 E-value=0.63 Score=39.90 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++...++.++++. ...+|.+.|||+||.++..++..
T Consensus 108 ~~~i~~~i~~~~~~~--~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 108 QDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhC--CCcceEEeccchhHHHHHHHHHH
Confidence 355666666666553 12489999999999998776643
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=84.42 E-value=0.51 Score=40.72 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++...++.+.++. ...+|.+.|||+||.++..++..
T Consensus 120 ~~~i~~~i~~~~~~~--~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 120 RDDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHhC--CCceEEEeccchHHHHHHHHHHH
Confidence 455666666655542 12589999999999998877654
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.03 E-value=5.8 Score=35.32 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=63.1
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee------cccccee-EEeeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT------PRVVGVD-TAASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~------~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
..+++|||| +| ++.. ....|.+.|+.+++....+. .+...+. ..|||||+.|+--+.+. ....+.+.
T Consensus 188 ~~v~~s~dg-~l-asgs--~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~--t~~~i~lw 261 (393)
T d1sq9a_ 188 TSVDISERG-LI-ATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLY 261 (393)
T ss_dssp CEEEECTTS-EE-EEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEE
T ss_pred EEEEECCCC-EE-EEEe--CCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCC--Ccceeeec
Confidence 357899999 33 3322 23457888998875222221 1121222 34999999887766542 12356666
Q ss_pred eCCCCCCceEEEc-------------CCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCC
Q 010654 108 PVDNTSETTVLIP-------------HRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 108 ~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~ 156 (505)
|++. +.....+. .. ...|..++|++| .+++....++ .+.+|++.+
T Consensus 262 d~~~-g~~~~~l~~~~~~~~~~~~~~gH-~~~V~~l~fspd~~~l~S~s~D~--~v~vWd~~~ 320 (393)
T d1sq9a_ 262 ETEF-GERIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDG--KLRFWDVKT 320 (393)
T ss_dssp ETTT-CCEEEEECBC--------CCBSB-SSCEEEEEECSSSSEEEEEETTS--EEEEEETTT
T ss_pred cccc-ceeeeeeccccccccceeeeecc-cCceeeeccCCCCCeeEEECCCC--EEEEEECCC
Confidence 7765 32211221 11 124678899887 4555566665 477889874
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=83.95 E-value=1.3 Score=37.80 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++...+..+.++. ...+|.+.|||.||.++..++..
T Consensus 115 ~~~i~~~i~~~~~~~--~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 115 QNELVATVLDQFKQY--PSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--CCceEEEecccchHHHHHHHHHH
Confidence 445566665555442 13689999999999988876653
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=83.68 E-value=0.71 Score=39.74 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++...++.++++. ..-+|.+.|||+||.+|..++..
T Consensus 121 ~~~v~~~v~~~~~~~--~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 121 ADTLRQKVEDAVREH--PDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--CCcceeeeccchHHHHHHHHHHH
Confidence 345566666655542 12489999999999998877754
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.46 E-value=13 Score=32.23 Aligned_cols=132 Identities=5% Similarity=0.016 Sum_probs=68.0
Q ss_pred ceEEEEECCCCCCCCeEEEEec------CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee----------
Q 010654 8 DKAWLHKLEADQSNDICLYHEK------DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---------- 71 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~------~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---------- 71 (505)
..+.+|++.++.. ...+... .......+.|+|||++|+.... ...+.+.|+.++. ...
T Consensus 227 ~~i~i~~~~~~~~--~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~---d~~i~iwd~~~~~-~~~~~~~~~~~~~ 300 (388)
T d1erja_ 227 RAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL---DRSVKLWNLQNAN-NKSDSKTPNSGTC 300 (388)
T ss_dssp SCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEET---TSEEEEEEC----------------CE
T ss_pred CeEEEeecccCcc--ceeeccccccccCCCCCEEEEEECCCCCEEEEEEC---CCcEEEEeccCCc-cccccccccccce
Confidence 4578888876532 1111111 1122346789999998765433 2356777776553 110
Q ss_pred ---eeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe------CC-EEEEE
Q 010654 72 ---LTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF------ID-HLAVY 140 (505)
Q Consensus 72 ---l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~d-~l~~~ 140 (505)
........ ...|+|+|+.|+.-+.+ ..|+++|+.+ ++....+....+ .+..+.+. ++ .++++
T Consensus 301 ~~~~~~~~~~v~~~~~s~~~~~l~sg~~d-----g~i~vwd~~~-~~~~~~l~~H~~-~V~~~~~~~~~~~spd~~~l~s 373 (388)
T d1erja_ 301 EVTYIGHKDFVLSVATTQNDEYILSGSKD-----RGVLFWDKKS-GNPLLMLQGHRN-SVISVAVANGSSLGPEYNVFAT 373 (388)
T ss_dssp EEEEECCSSCEEEEEECGGGCEEEEEETT-----SEEEEEETTT-CCEEEEEECCSS-CEEEEEECSSCTTCTTCEEEEE
T ss_pred eeecccccceEEEEEECCCCCEEEEEeCC-----CEEEEEECCC-CcEEEEEeCCCC-CEEEEEEecCcccCCCCCEEEE
Confidence 01111111 23499999877655433 3788889876 333223443333 35555543 33 45666
Q ss_pred EecCCeeEEEEEEc
Q 010654 141 EREGGLQKITTYRL 154 (505)
Q Consensus 141 ~~~~~~~~l~~~~~ 154 (505)
...++. +.+|++
T Consensus 374 ~s~Dg~--I~iW~~ 385 (388)
T d1erja_ 374 GSGDCK--ARIWKY 385 (388)
T ss_dssp EETTSE--EEEEEE
T ss_pred EeCCCE--EEEEee
Confidence 666764 566765
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=81.62 E-value=9.5 Score=32.91 Aligned_cols=71 Identities=10% Similarity=0.170 Sum_probs=44.9
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-ee-ccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LT-PRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
+.+..+||+. .+.. ...+.|+++|.+++. +.. +. +...-....|.||+++||+.+.. +.+|+++++...|
T Consensus 230 GiavD~~Gnl-yVa~--~~~g~I~~~dp~~g~-~~~~i~~p~~~~t~~afg~d~~~lyVt~~~----~g~i~~~~~~~~G 301 (314)
T d1pjxa_ 230 GMDFDEDNNL-LVAN--WGSSHIEVFGPDGGQ-PKMRIRCPFEKPSNLHFKPQTKTIFVTEHE----NNAVWKFEWQRNG 301 (314)
T ss_dssp EEEEBTTCCE-EEEE--ETTTEEEEECTTCBS-CSEEEECSSSCEEEEEECTTSSEEEEEETT----TTEEEEEECSSCB
T ss_pred eeEEecCCcE-EEEE--cCCCEEEEEeCCCCE-EEEEEECCCCCEEEEEEeCCCCEEEEEECC----CCcEEEEECCCCC
Confidence 4567788874 3322 235679999988775 332 22 22212234589999999887654 2599999987544
Q ss_pred C
Q 010654 114 E 114 (505)
Q Consensus 114 ~ 114 (505)
.
T Consensus 302 ~ 302 (314)
T d1pjxa_ 302 K 302 (314)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.99 E-value=14 Score=30.86 Aligned_cols=112 Identities=6% Similarity=0.050 Sum_probs=69.9
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
.+....|...+|+++... ....|+++++++.. .+.+....-. ....+++.+++||+.... ...|..+++++.
T Consensus 123 ~~l~vd~~~g~ly~~~~~-~~~~I~r~~~dGs~-~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~----~~~I~~~~~dG~ 196 (266)
T d1ijqa1 123 RAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNGG 196 (266)
T ss_dssp EEEEEETTTTEEEEEECS-SSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSC
T ss_pred ceEEEEcccCeEEEeccC-CCcceeEeccCCCc-eecccccccceeeEEEeeccccEEEEecCC----cCEEEEEECCCC
Confidence 456778888888877533 34679999998875 5555432211 123477889999998543 248999999873
Q ss_pred CCceEEEcCCC-CceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 113 SETTVLIPHRE-SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 113 ~~~~~~~~~~~-~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.... ++.... .....+++..++.++++-... ..++.++..
T Consensus 197 ~~~~-~~~~~~~~~~p~~lav~~~~ly~td~~~--~~I~~~~~~ 237 (266)
T d1ijqa1 197 NRKT-ILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRL 237 (266)
T ss_dssp SCEE-EEECTTTTSSEEEEEEETTEEEEEETTT--TEEEEEETT
T ss_pred CEEE-EEeCCCcccccEEEEEECCEEEEEECCC--CeEEEEECC
Confidence 3232 333222 223457888888888775444 345555543
|